View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: SO6232B-LTR4-TNT-insertion-2 (Length: 696)
Name: SO6232B-LTR4-TNT-insertion-2
Description: SO6232B-LTR4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] SO6232B-LTR4-TNT-insertion-2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 678; Significance: 0; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 678; E-Value: 0
Query Start/End: Original strand, 9 - 686
Target Start/End: Complemental strand, 26056633 - 26055956
Alignment:
| Q |
9 |
aacaaagatgtcattaggaaaaaatcactccaaaatcacacattcctttttctatatataggtatagatgaattctcatattcccatcaagaatatgttt |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056633 |
aacaaagatgtcattaggaaaaaatcactccaaaatcacacattcctttttctatatataggtatagatgaattctcatattcccatcaagaatatgttt |
26056534 |
T |
|
| Q |
109 |
gagaggctagtagttcaatcaaattcagtttcaaagtcgaagtactgaatatctgtgctcaaactgacaacccaattctccatttcttaattaaccctcc |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056533 |
gagaggctagtagttcaatcaaattcagtttcaaagtcgaagtactgaatatctgtgctcaaactgacaacccaattctccatttcttaattaaccctcc |
26056434 |
T |
|
| Q |
209 |
aaagcttcaaaaccctatataaccagaacaaaacaaaacttccatttcaatctcagtctttgagttggtggtggatacaatgattgagcgcagagaaaga |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056433 |
aaagcttcaaaaccctatataaccagaacaaaacaaaacttccatttcaatctcagtctttgagttggtggtggatacaatgattgagcgcagagaaaga |
26056334 |
T |
|
| Q |
309 |
gaaggacccttgatgaagaacagccctcaatctctactcatatcaaggatcattaccactgtaatcattggagttcttactggatgcatcatagttttct |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056333 |
gaaggacccttgatgaagaacagccctcaatctctactcatatcaaggatcattaccactgtaatcattggagttcttactggatgcatcatagttttct |
26056234 |
T |
|
| Q |
409 |
tttttcctaaagacttctttgtttctcagtctattacctcaaatcgtcacctacctgttgctgtacccaagacccaggtttcattttcatcaaagattaa |
508 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056233 |
tttttcctaaagacttctttgtttctcagtctattacctcaaatcgtcacctacctgttgctgtacccaagacccaggtttcattttcatcaaagattaa |
26056134 |
T |
|
| Q |
509 |
ctatcatctttcgtgtttttctttcatttttaaattgtgtcttctcttaacttcttgcatattgcatgttgcatgatagagtttgattttgctgctttta |
608 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056133 |
ctatcatctttcgtgtttttctttcatttttaaattgtgtcttctcttaacttcttgcatattgcatgttgcatgatagagtttgattttgctgctttta |
26056034 |
T |
|
| Q |
609 |
caacttgtggttcattgtggaattgtgtttgattttactgatttagtcgactcaaacgaatttaagcacatttaatta |
686 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26056033 |
caacttgtggttcattgtggaattgtgtttgattttactgatttagtcgactcaaacgaatttaagcacatttaatta |
26055956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 26 - 654
Target Start/End: Complemental strand, 26112184 - 26111564
Alignment:
| Q |
26 |
gaaaaaatcactccaaaatcacacattcctttttctatatataggtatagatgaattctcatattcccatcaagaatatgtttgagaggctagtagttca |
125 |
Q |
| |
|
||||| |||| |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26112184 |
gaaaatatcaatccaaaatcacatattcctttatctatatataggtatagatgtattctcatattcccatcaagaatat--ttgagaggctagtagttca |
26112087 |
T |
|
| Q |
126 |
atcaaattcagtttcaaagtcgaagtactgaatatctgtgctcaaactgacaacccaattctccatttcttaatta---accctccaa--agcttcaaaa |
220 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| | ||||||| || |
|
|
| T |
26112086 |
atcaaattcagtttcaaagt---------gaatatctgtgctcaaactgaccacccaattcttcatttcttaattattaaccctcctataagcttcagaa |
26111996 |
T |
|
| Q |
221 |
ccctatataaccagaacaaaacaaaacttccatttcaatctcagtctttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacccttg |
320 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
26111995 |
ccctatataaccagaacaaaacaaaacttccatttcaatctcagtctttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacctttg |
26111896 |
T |
|
| Q |
321 |
atgaagaacagccctcaatctctactcatatcaaggatcattaccactgtaatcattggagttcttactggatgcatcatagttttcttttttcctaaag |
420 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
26111895 |
atgaagaacagccctcaatctctactcatatcaaggatcattaccactgtaatcattggagttcttattggatgcatcatagttttcttttttcctaatg |
26111796 |
T |
|
| Q |
421 |
acttctttgtttctcagtctattacctcaaatcgtcacctacctgttgctgtacccaagacccaggtttcattttcatcaaagattaactatcatctttc |
520 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26111795 |
acttctttgtttctcaatctattacctcaattcgtcacctacctgttgctgtacccaagacccaggtttcattttcatcaaagattaactatcatctttc |
26111696 |
T |
|
| Q |
521 |
gtgtttttctttcatttttaaattgtgtcttctcttaacttcttgcatattgcatgttgcatgatagagtttgattttgctgcttttacaacttgtggtt |
620 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26111695 |
gtgtttttctttcatttttaaat--tgtcttctcttaacttcttgcatattgcatgttgcatgatagagtttgattttgctgcttttacaacttgtgggt |
26111598 |
T |
|
| Q |
621 |
cattgtggaattgtgtttgattttactgatttag |
654 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
26111597 |
cattgtggaattgtgtttgattttattgatttag |
26111564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 60 - 500
Target Start/End: Complemental strand, 26085817 - 26085379
Alignment:
| Q |
60 |
ctatatataggtatagatgaattctcatattcccatcaagaatatgtttgagaggctagtagttcaatcaaattcagtttcaaagtcgaagtactgaata |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26085817 |
ctatatataggtatagatgaattctcatattcccatcaagaat--gtttgagaggctagtagttcaatcaaattcagtatcaaagtcgaagtactgaata |
26085720 |
T |
|
| Q |
160 |
tctgtgctcaaactgacaacccaattctccatttcttaattaaccctccaaagcttcaaaaccctatataaccagaacaaaacaaaacttccatttcaat |
259 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26085719 |
tctgcgctcaaactgaccacccaattctccatttcttaattaaccctccaaagcttcaaaaccctatataaccagaacaaaacaaaactaccatttcaat |
26085620 |
T |
|
| Q |
260 |
ctcagtctttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacccttgatgaagaacagccctcaatctctactcatatcaaggatc |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26085619 |
ctcagtctttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacctttgatgaagaacagccctcaatctctactcatatcaaggatc |
26085520 |
T |
|
| Q |
360 |
attaccactgtaatcattggagttcttactggatgcatcatagttttcttttttcctaaagacttctttgtttctcagtctattacctcaaatcgtcacc |
459 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
26085519 |
attaccactgtaatcattggagttcttgctggatgcatcatagttttctattttcctaatgacttctttgtttctcaatctattacctcaattcgtcacc |
26085420 |
T |
|
| Q |
460 |
tacctgttgctgtacccaagacccaggtttcattttcatca |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26085419 |
tacctgttgctgtacccaagacccaggtttcattttcatca |
26085379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 154 - 556
Target Start/End: Complemental strand, 26068150 - 26067748
Alignment:
| Q |
154 |
tgaatatctgtgctcaaactgacaacccaattctccatttcttaattaaccctccaaagcttcaaaaccctatataaccagaacaaaacaaaacttccat |
253 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26068150 |
tgaatatatgtgctcaaactgaccacccaattctccatttcttaattaaccctccaaagcttcaaaaccctatataaccagaacaaaacaaaacttccat |
26068051 |
T |
|
| Q |
254 |
ttcaatctcagtctttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacccttgatgaagaacagccctcaatctctactcatatca |
353 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
26068050 |
ttcaatctcagtctttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacctttgatgaagaacagccctcaatctctactcatatca |
26067951 |
T |
|
| Q |
354 |
aggatcattaccactgtaatcattggagttcttactggatgcatcatagttttcttttttcctaaagacttctttgtttctcagtctattacctcaaatc |
453 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26067950 |
aggatcattaccactgtaatcattggagttcttactggatgcatcatagttttcttttttcctaaagacttctttgtttctcagtctattacctcaaatc |
26067851 |
T |
|
| Q |
454 |
gtcacctacctgttgctgtacccaagacccaggtttcattttcatcaaagattaactatcatctttcgtgtttttctttcatttttaaattgtgtcttct |
553 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26067850 |
gtcacctacctgttgctgtacccaagacccaggtttcattttcatcaaagattaactatcatctttcgtgtttttctttcatttttaaattgtgtattct |
26067751 |
T |
|
| Q |
554 |
ctt |
556 |
Q |
| |
|
||| |
|
|
| T |
26067750 |
ctt |
26067748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 86 - 544
Target Start/End: Complemental strand, 26129085 - 26128629
Alignment:
| Q |
86 |
atattcccatcaa-gaatatgtttgagaggctagtagttcaatcaaattcagtttcaaagtcgaagtactgaatatctgtgctcaaactgacaacccaat |
184 |
Q |
| |
|
||||||||||||| |||||| |||||||||| |||||||||| || | ||||| || | ||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
26129085 |
atattcccatcaaagaatat--ttgagaggcttttagttcaatcgaacttagtttagaaatagaagtactgaatacatgtgctcaaactgaccacccaat |
26128988 |
T |
|
| Q |
185 |
tctccatttcttaattaaccctccaa--agcttcaaaaccctatataaccagaacaaaacaaaacttccatttcaatctcagtctttgagttggtggtgg |
282 |
Q |
| |
|
||| |||||||||||||||||||| | ||||||| ||||||||||||||||||| |||||| ||| |||||||||||||| |||||||| ||||||||| |
|
|
| T |
26128987 |
tcttcatttcttaattaaccctcctataagcttcagaaccctatataaccagaactaaacaatactaccatttcaatctcaatctttgaggtggtggtgg |
26128888 |
T |
|
| Q |
283 |
atacaatgattgagcgcagagaaagagaaggacccttgatgaagaacagccctcaatctctactcatatcaaggatcattaccactgtaatcattggagt |
382 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| |||| | |||||| |||||||| ||| ||||| |||||||||| | ||| |
|
|
| T |
26128887 |
atacaatgattgagcacagagaaagagaaggacccttgatgaagaacaacccttattctctaagcatatcaaagattgttaccgctgtaatcatagtagt |
26128788 |
T |
|
| Q |
383 |
tcttactggatgcatcatagttttcttttttcctaaagacttctttgtttctcagtctattacctcaaatcgtcacctacctgttgctgtacccaagacc |
482 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||||| ||||| | | ||| |||||| |||||||||| |
|
|
| T |
26128787 |
tcttactggatgcatcatagttttcttttttcctaatgacttctttgcttctcaatccattacctcaattcgtctcttcccttttgctggacccaagacc |
26128688 |
T |
|
| Q |
483 |
caggtttcattttcatcaaagattaactatcatctttcgtgtttttctttcatttttaaatt |
544 |
Q |
| |
|
|||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
26128687 |
caggtttctttttcatcaaagatta---tttatctttcgtgtttttctttcatttttaaatt |
26128629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 255 - 507
Target Start/End: Complemental strand, 26121488 - 26121236
Alignment:
| Q |
255 |
tcaatctcagtctttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacccttgatgaagaacagccctcaatctctactcatatcaa |
354 |
Q |
| |
|
||||| |||||||||||| | ||||||||||||||||||| || ||||||||||||||||| |||||||||||||| | |||| |||||||||||||||| |
|
|
| T |
26121488 |
tcaatatcagtctttgaggtagtggtggatacaatgattgggctcagagaaagagaaggacgcttgatgaagaacaactctcattctctactcatatcaa |
26121389 |
T |
|
| Q |
355 |
ggatcattaccactgtaatcattggagttcttactggatgcatcatagttttcttttttcctaaagacttctttgtttctcagtctattacctcaaatcg |
454 |
Q |
| |
|
||| ||||||||||||||||||||||||||| |||||||||| || |||||| ||||||||| ||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
26121388 |
taatcgttaccactgtaatcattggagttcttattggatgcatcttacttttctattttcctaatgacttctttgtttctcaatctattacctcaattcg |
26121289 |
T |
|
| Q |
455 |
tcacctacctgttgctgtacccaagacccaggtttcattttcatcaaagatta |
507 |
Q |
| |
|
|| ||| ||| |||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
26121288 |
tctcctcccttttgctggacccaagactcaggtttcattttcatcaaagatta |
26121236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 227 - 506
Target Start/End: Complemental strand, 26038511 - 26038231
Alignment:
| Q |
227 |
ataaccagaacaa-aacaaaacttccatttcaatctcagtctttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacccttgatgaa |
325 |
Q |
| |
|
|||||||||| || ||||||||| |||| |||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
26038511 |
ataaccagaagaacaacaaaactaccatctcaatctcagtctttgaggtggtggtagctacaatgattgggcgcagagaaagagaaggacccttaatgcg |
26038412 |
T |
|
| Q |
326 |
gaacagccctcaatctctactcatatcaaggatcattaccactgtaatcattggagttcttactggatgcatcatagttttcttttttcctaaagacttc |
425 |
Q |
| |
|
|||| |||||| ||||||| || |||||||||| |||| ||||| | ||||| ||||||| |||||||||| ||| ||||||||||||||| | |||| |
|
|
| T |
26038411 |
aaacaaccctcattctctacgcaaatcaaggatcgttactgctgtagtaattggtgttcttattggatgcatcttagctttcttttttcctaatggcttc |
26038312 |
T |
|
| Q |
426 |
tttgtttctcagtctattacctcaaatcgtcacctacctgttgctgtacccaagacccaggtttcattttcatcaaagatt |
506 |
Q |
| |
|
||||||||||| |||||||| |||||||||| | | |||||| || | |||| |||||||||| |||||||||||||||| |
|
|
| T |
26038311 |
tttgtttctcaatctattacatcaaatcgtcgcatcgctgttgttggatccaaaacccaggttttattttcatcaaagatt |
26038231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 154 - 248
Target Start/End: Complemental strand, 26049083 - 26048989
Alignment:
| Q |
154 |
tgaatatctgtgctcaaactgacaacccaattctccatttcttaattaaccctccaaagcttcaaaaccctatataaccagaacaaaacaaaact |
248 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26049083 |
tgaatatatgtgctcaaactgaccacccaattctccatttcttaattaaccctccaaagcttcaaaaccctatataaccagaacaaaacaaaact |
26048989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 395
Target Start/End: Complemental strand, 26120951 - 26120823
Alignment:
| Q |
267 |
tttgagttggtggtggatacaatgattgagcgcagagaaagagaaggacccttgatgaagaacagccctcaatctctactcatatcaaggatcattacca |
366 |
Q |
| |
|
|||||| |||||||| || ||||||||| ||||| ||||| |||||||||||| ||| | |||| ||| ||||||||| || |||||||||| ||||| |
|
|
| T |
26120951 |
tttgaggtggtggtgtattcaatgattgggcgcaaagaaatagaaggacccttaatgcaaaacaatccttaatctctacgcaaatcaaggatcgctacca |
26120852 |
T |
|
| Q |
367 |
ctgtaatcattggagttcttactggatgc |
395 |
Q |
| |
|
||||| | || |||||||||| ||||||| |
|
|
| T |
26120851 |
ctgtagtaatcggagttcttattggatgc |
26120823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 26086331 - 26086292
Alignment:
| Q |
26 |
gaaaaaatcactccaaaatcacacattcctttttctatat |
65 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26086331 |
gaaaaaatcactccaaaatcgcacattcctttttctatat |
26086292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 379 - 436
Target Start/End: Complemental strand, 26065603 - 26065546
Alignment:
| Q |
379 |
gagttcttactggatgcatcatagttttcttttttcctaaagacttctttgtttctca |
436 |
Q |
| |
|
||||||||| ||||||||| ||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
26065603 |
gagttcttataggatgcatcttagctttcttttttcccaatgacttctttgtttctca |
26065546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 613 - 664
Target Start/End: Complemental strand, 26128527 - 26128475
Alignment:
| Q |
613 |
ttgtggttcattgtggaattgtgtttgattttactga-tttagtcgactcaaa |
664 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||| |||||| |||||||| |
|
|
| T |
26128527 |
ttgtgggtcattgtggaattgtgtttgatcttactgattttagttgactcaaa |
26128475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 408 - 450
Target Start/End: Original strand, 26056610 - 26056652
Alignment:
| Q |
408 |
ttttttcctaaagacttctttgtttctcagtctattacctcaa |
450 |
Q |
| |
|
||||||||||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
26056610 |
ttttttcctaatgacatctttgtttctcaatctattacctcaa |
26056652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 26049161 - 26049120
Alignment:
| Q |
26 |
gaaaaaatcactccaaaatcacacattcctttttctatatat |
67 |
Q |
| |
|
||||||| |||||||||||||||||||||| | ||||||||| |
|
|
| T |
26049161 |
gaaaaaaacactccaaaatcacacattcctatatctatatat |
26049120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 26068228 - 26068187
Alignment:
| Q |
26 |
gaaaaaatcactccaaaatcacacattcctttttctatatat |
67 |
Q |
| |
|
||||||| |||||||||||||||||||||| | ||||||||| |
|
|
| T |
26068228 |
gaaaaaaacactccaaaatcacacattcctatatctatatat |
26068187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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