View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5668-60 (Length: 104)
Name: Solexa-NF5668-60
Description: NF5668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5668-60 |
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Alignment Details
Target: chr2 (Bit Score: 83; Significance: 7e-40; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 7e-40
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 138093 - 137999
Alignment:
| Q |
8 |
ccctactgtttacagatatctcattgattctgcacacagctttgttgaatcatatgacgatccttcccgtcattgccgaggccgctacactcgca |
102 |
Q |
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| T |
138093 |
ccctactgtttacagatatctcattgattctgcacacagctttgttgaatcatatgacgatccttcccgttatggccgaggccgctacagtcgca |
137999 |
T |
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