View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5668-63 (Length: 151)
Name: Solexa-NF5668-63
Description: NF5668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5668-63 |
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Alignment Details
Target: chr2 (Bit Score: 70; Significance: 7e-32; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 8379253 - 8379342
Alignment:
| Q |
11 |
catagggagctgtcacaataagatatatgctatcaataagtgagtccaataaagtttatatatttttaatctgagcataccaatcccacc |
100 |
Q |
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| T |
8379253 |
catagggagctgtcacaaaaagatttatgctatcaataagtgagtccaataaagtttatatatttttaatctgagcggatcaatcccacc |
8379342 |
T |
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