View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5668-82 (Length: 97)
Name: Solexa-NF5668-82
Description: NF5668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5668-82 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 85; Significance: 4e-41; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 85; E-Value: 4e-41
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 47035682 - 47035778
Alignment:
| Q |
1 |
tgagatgagttgacatactaccgagaaaaacacactatttcacccgaggagcatgaaggcgagtgaaacattcaacacgaacctccttattcttcca |
97 |
Q |
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| T |
47035682 |
tgagatgagttgacatactaccgagaaaaacacattatttcacccgaggagcatgaaggcgagtgaaaccttcaacacaaacctccttattcttcca |
47035778 |
T |
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