View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5670-8 (Length: 237)
Name: Solexa-NF5670-8
Description: NF5670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5670-8 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 21 - 225
Target Start/End: Original strand, 22329618 - 22329822
Alignment:
| Q |
21 |
catgcagattaaataactgagctagcttgctcaaaagttgttgtttatttccatcttggtgtaaaaccccagttgcagaatgaagcattttctccttgtc |
120 |
Q |
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| T |
22329618 |
catgcagattaaataactgagctagcttgctcaaaagttgttgtttatttccatcttggtgtaaaaccccagttgcagaatgaagcattttctccttgtc |
22329717 |
T |
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| Q |
121 |
acgaaaaaggtagtaaacccaaataacccgacatataaattttgcatattcaaacttgtgtatgattttggctttggttgttggtataaatggttaatgc |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
22329718 |
acgaaaaaggtagtaaacccaaataacccgacatataaattttgcatattcaaacttgtgtatgattttggctttggttgttggtatatatggttaatgc |
22329817 |
T |
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| Q |
221 |
tgtct |
225 |
Q |
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||||| |
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| T |
22329818 |
tgtct |
22329822 |
T |
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