View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5676-26 (Length: 191)
Name: Solexa-NF5676-26
Description: NF5676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5676-26 |
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Alignment Details
Target: chr6 (Bit Score: 164; Significance: 7e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 29404623 - 29404793
Alignment:
| Q |
8 |
taattgtgtatataaattatgttcgagtataatgaataaaaatgtgagcattgaataatatataaatgagaggatccgtataaccattacttgaagatgc |
107 |
Q |
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| T |
29404623 |
taattgtgtatataaattatgttcgagtataatgaataaaaatgtgagcattgaataatatataaatgagaggatccgtataaccattacttgaagatgc |
29404722 |
T |
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| Q |
108 |
gatgtggaaaccanttttgtagttgcttctgacccaatatatgtgataaccttcgatgttttagactccct |
178 |
Q |
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| T |
29404723 |
gatgtggaaaccatttttgtagttgcttctgacccaatatatgtgataacattcgatgttttagactccct |
29404793 |
T |
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