View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5676-5 (Length: 133)

Name: Solexa-NF5676-5
Description: NF5676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5676-5
Solexa-NF5676-5
[»] chr7 (59 HSPs)
chr7 (8-125)||(33072872-33072989)
chr7 (8-125)||(31005141-31005260)
chr7 (8-125)||(35906446-35906565)
chr7 (9-125)||(11593878-11593996)
chr7 (8-122)||(34869341-34869457)
chr7 (11-125)||(37617862-37617978)
chr7 (8-125)||(13859253-13859372)
chr7 (8-125)||(49029194-49029313)
chr7 (8-119)||(43281600-43281711)
chr7 (8-121)||(39906615-39906730)
chr7 (8-123)||(36651914-36652029)
chr7 (8-125)||(33350051-33350170)
chr7 (8-121)||(45836725-45836840)
chr7 (8-125)||(46356101-46356219)
chr7 (8-125)||(12841520-12841639)
chr7 (8-125)||(44855417-44855536)
chr7 (8-121)||(38606927-38607041)
chr7 (8-121)||(32630517-32630631)
chr7 (12-125)||(36514456-36514569)
chr7 (8-120)||(35559238-35559353)
chr7 (8-118)||(23404343-23404455)
chr7 (7-120)||(36136687-36136802)
chr7 (48-125)||(36869576-36869653)
chr7 (8-121)||(7272961-7273076)
chr7 (8-78)||(6374833-6374905)
chr7 (8-121)||(47848596-47848711)
chr7 (8-108)||(8492478-8492580)
chr7 (12-125)||(5335840-5335953)
chr7 (8-121)||(43491230-43491345)
chr7 (55-124)||(24598440-24598509)
chr7 (8-78)||(29650349-29650421)
chr7 (12-118)||(43282330-43282441)
chr7 (8-80)||(46014425-46014499)
chr7 (8-54)||(2885967-2886013)
chr7 (48-118)||(27021993-27022063)
chr7 (12-125)||(30200212-30200323)
chr7 (48-118)||(39811882-39811952)
chr7 (48-125)||(14593679-14593756)
chr7 (12-121)||(19262682-19262791)
chr7 (48-112)||(1523747-1523811)
chr7 (8-121)||(42187393-42187507)
chr7 (82-125)||(16013202-16013245)
chr7 (8-121)||(25579322-25579431)
chr7 (48-121)||(7189521-7189593)
chr7 (47-124)||(40139202-40139279)
chr7 (51-125)||(29653844-29653918)
chr7 (8-46)||(36869489-36869527)
chr7 (84-125)||(1740715-1740756)
chr7 (52-125)||(24549978-24550051)
chr7 (12-118)||(48736148-48736256)
chr7 (48-104)||(25731640-25731696)
chr7 (12-56)||(45558351-45558395)
chr7 (42-121)||(40008698-40008777)
chr7 (8-42)||(22349623-22349657)
chr7 (17-55)||(27021946-27021984)
chr7 (50-123)||(24434654-24434727)
chr7 (84-121)||(28542206-28542243)
chr7 (8-44)||(31682847-31682883)
chr7 (8-125)||(36102010-36102129)
[»] chr1 (46 HSPs)
chr1 (8-125)||(8671838-8671955)
chr1 (8-125)||(1210663-1210782)
chr1 (8-121)||(696191-696306)
chr1 (8-125)||(9592652-9592771)
chr1 (8-125)||(22090012-22090133)
chr1 (8-125)||(30202375-30202494)
chr1 (8-121)||(32082990-32083105)
chr1 (8-125)||(49347638-49347757)
chr1 (8-118)||(51601983-51602093)
chr1 (8-121)||(15085856-15085971)
chr1 (12-125)||(34792598-34792713)
chr1 (8-125)||(43240624-43240745)
chr1 (8-125)||(51441010-51441129)
chr1 (8-121)||(8391694-8391809)
chr1 (8-120)||(4001700-4001814)
chr1 (8-122)||(32231199-32231315)
chr1 (8-121)||(37463118-37463231)
chr1 (8-125)||(9509236-9509355)
chr1 (8-125)||(9599639-9599758)
chr1 (8-121)||(18469327-18469440)
chr1 (8-118)||(38807916-38808031)
chr1 (12-125)||(26016355-26016470)
chr1 (8-100)||(52561856-52561950)
chr1 (9-112)||(27848051-27848155)
chr1 (8-121)||(19936444-19936551)
chr1 (48-121)||(4379927-4380000)
chr1 (12-115)||(43423645-43423752)
chr1 (22-122)||(39140434-39140543)
chr1 (49-118)||(16142172-16142241)
chr1 (48-125)||(52442791-52442868)
chr1 (8-125)||(1661344-1661467)
chr1 (8-55)||(4029112-4029159)
chr1 (82-121)||(34827423-34827462)
chr1 (46-117)||(41611098-41611169)
chr1 (12-118)||(18793237-18793345)
chr1 (82-121)||(46226603-46226642)
chr1 (50-116)||(4590813-4590879)
chr1 (47-120)||(51234537-51234611)
chr1 (61-118)||(16822319-16822376)
chr1 (48-125)||(40419557-40419634)
chr1 (11-55)||(2544589-2544633)
chr1 (72-112)||(17275137-17275177)
chr1 (48-116)||(17815402-17815469)
chr1 (57-121)||(22167643-22167707)
chr1 (80-120)||(32404850-32404890)
chr1 (48-114)||(33561076-33561140)
[»] chr8 (51 HSPs)
chr8 (8-125)||(36395195-36395314)
chr8 (8-125)||(36565486-36565605)
chr8 (8-125)||(39946775-39946894)
chr8 (8-125)||(36545065-36545186)
chr8 (8-125)||(40813240-40813361)
chr8 (8-125)||(2796473-2796594)
chr8 (8-121)||(18125097-18125210)
chr8 (8-121)||(18752120-18752233)
chr8 (38-125)||(12492119-12492206)
chr8 (8-126)||(45419156-45419274)
chr8 (8-121)||(42854249-42854364)
chr8 (8-121)||(8879685-8879800)
chr8 (48-127)||(15215558-15215637)
chr8 (12-102)||(25985462-25985552)
chr8 (9-123)||(13171895-13172011)
chr8 (8-68)||(8932679-8932739)
chr8 (48-120)||(29520583-29520655)
chr8 (22-125)||(42493565-42493668)
chr8 (12-111)||(32043522-32043623)
chr8 (15-77)||(11523976-11524040)
chr8 (31-125)||(25288820-25288916)
chr8 (31-125)||(25300155-25300251)
chr8 (56-121)||(37077687-37077752)
chr8 (11-119)||(6510676-6510784)
chr8 (8-90)||(12796945-12797027)
chr8 (23-96)||(21121105-21121180)
chr8 (17-125)||(30748377-30748485)
chr8 (22-125)||(39760683-39760788)
chr8 (52-121)||(30783331-30783400)
chr8 (47-116)||(36069570-36069639)
chr8 (8-121)||(13986416-13986531)
chr8 (24-121)||(16351312-16351411)
chr8 (12-125)||(30456461-30456575)
chr8 (9-109)||(44681285-44681387)
chr8 (12-118)||(16252860-16252966)
chr8 (48-121)||(29735728-29735802)
chr8 (12-121)||(5908564-5908675)
chr8 (48-120)||(10080192-10080264)
chr8 (17-105)||(16705700-16705788)
chr8 (8-121)||(30113442-30113557)
chr8 (8-43)||(12491383-12491418)
chr8 (38-116)||(25439394-25439470)
chr8 (8-119)||(2518637-2518749)
chr8 (17-92)||(7046285-7046362)
chr8 (12-91)||(9695583-9695664)
chr8 (83-125)||(43732485-43732527)
chr8 (88-125)||(39953591-39953628)
chr8 (48-120)||(39051065-39051137)
chr8 (62-121)||(9905187-9905246)
chr8 (54-125)||(16917102-16917173)
chr8 (70-125)||(36143287-36143342)
[»] chr4 (68 HSPs)
chr4 (8-125)||(31960059-31960178)
chr4 (8-125)||(48622788-48622905)
chr4 (8-125)||(12494668-12494787)
chr4 (8-125)||(436147-436266)
chr4 (8-125)||(33227127-33227246)
chr4 (8-125)||(4440773-4440890)
chr4 (8-125)||(33191093-33191212)
chr4 (8-125)||(52569760-52569879)
chr4 (8-125)||(1777262-1777379)
chr4 (8-125)||(48174338-48174457)
chr4 (8-125)||(53707712-53707831)
chr4 (11-125)||(56375208-56375324)
chr4 (8-121)||(27450424-27450533)
chr4 (8-125)||(43433836-43433961)
chr4 (8-125)||(23906540-23906665)
chr4 (8-125)||(46583069-46583188)
chr4 (8-125)||(47265447-47265566)
chr4 (8-122)||(37773696-37773811)
chr4 (8-125)||(28236103-28236220)
chr4 (8-121)||(39100780-39100893)
chr4 (8-121)||(45205092-45205208)
chr4 (8-125)||(50286889-50286999)
chr4 (8-125)||(31458946-31459067)
chr4 (8-112)||(37797783-37797889)
chr4 (15-121)||(27983122-27983230)
chr4 (23-121)||(35690226-35690326)
chr4 (9-121)||(1793382-1793496)
chr4 (9-118)||(1211638-1211747)
chr4 (8-109)||(51421666-51421767)
chr4 (11-118)||(41009598-41009707)
chr4 (9-123)||(20591546-20591662)
chr4 (12-125)||(10775671-10775786)
chr4 (12-125)||(17900398-17900513)
chr4 (24-125)||(43070029-43070128)
chr4 (12-125)||(33709837-33709957)
chr4 (12-122)||(54470128-54470240)
chr4 (8-125)||(49987346-49987465)
chr4 (8-125)||(56224983-56225103)
chr4 (54-119)||(2588905-2588970)
chr4 (7-113)||(16002857-16002965)
chr4 (8-118)||(20601891-20602003)
chr4 (12-120)||(45423542-45423648)
chr4 (12-125)||(51252710-51252823)
chr4 (8-125)||(7092465-7092583)
chr4 (13-122)||(44047598-44047709)
chr4 (55-122)||(18966474-18966541)
chr4 (8-55)||(26037750-26037797)
chr4 (48-117)||(25967554-25967623)
chr4 (23-125)||(31403276-31403384)
chr4 (12-114)||(41192763-41192869)
chr4 (9-89)||(20191990-20192069)
chr4 (13-125)||(25257831-25257943)
chr4 (8-64)||(39708412-39708470)
chr4 (51-121)||(20105761-20105831)
chr4 (12-104)||(10208977-10209067)
chr4 (12-121)||(50662311-50662420)
chr4 (82-124)||(42293579-42293621)
chr4 (39-121)||(44667520-44667602)
chr4 (39-121)||(44686845-44686927)
chr4 (83-125)||(44860772-44860814)
chr4 (76-125)||(11389638-11389687)
chr4 (23-121)||(34233291-34233393)
chr4 (55-119)||(21106908-21106972)
chr4 (71-123)||(25755237-25755289)
chr4 (81-120)||(4137018-4137057)
chr4 (12-55)||(35555896-35555939)
chr4 (12-55)||(44360077-44360120)
chr4 (70-121)||(45094471-45094522)
[»] chr6 (30 HSPs)
chr6 (8-125)||(28085294-28085413)
chr6 (8-121)||(608081-608194)
chr6 (8-125)||(14030724-14030844)
chr6 (8-121)||(20427881-20427996)
chr6 (8-117)||(5258393-5258506)
chr6 (8-125)||(32755837-32755958)
chr6 (8-121)||(9706698-9706813)
chr6 (9-121)||(10100105-10100217)
chr6 (8-121)||(30031178-30031293)
chr6 (9-120)||(5631741-5631858)
chr6 (48-121)||(9593999-9594072)
chr6 (8-121)||(35043686-35043801)
chr6 (23-114)||(6056032-6056123)
chr6 (12-121)||(5080777-5080888)
chr6 (8-97)||(21352082-21352171)
chr6 (8-68)||(12890559-12890621)
chr6 (8-125)||(28027071-28027189)
chr6 (12-125)||(33083976-33084091)
chr6 (52-115)||(9568588-9568651)
chr6 (48-125)||(33998291-33998368)
chr6 (57-121)||(2689578-2689642)
chr6 (8-100)||(5095816-5095910)
chr6 (49-121)||(33496106-33496178)
chr6 (12-116)||(6641658-6641764)
chr6 (47-125)||(7150604-7150682)
chr6 (12-118)||(14389416-14389518)
chr6 (53-121)||(2065048-2065116)
chr6 (81-121)||(4948627-4948667)
chr6 (81-121)||(4955598-4955638)
chr6 (90-125)||(6293698-6293733)
[»] chr3 (48 HSPs)
chr3 (8-125)||(52138718-52138837)
chr3 (8-125)||(51447955-51448073)
chr3 (8-125)||(28245355-28245474)
chr3 (8-125)||(54128296-54128415)
chr3 (8-125)||(54278938-54279057)
chr3 (8-125)||(25191297-25191414)
chr3 (12-121)||(21995-22106)
chr3 (8-125)||(33272267-33272392)
chr3 (8-120)||(47233841-47233955)
chr3 (8-118)||(53519511-53519629)
chr3 (9-121)||(5168750-5168868)
chr3 (8-121)||(26490239-26490352)
chr3 (8-125)||(27917490-27917607)
chr3 (12-125)||(45728064-45728180)
chr3 (8-109)||(48734380-48734481)
chr3 (8-121)||(19736918-19737034)
chr3 (8-104)||(49503799-49503897)
chr3 (10-123)||(43695012-43695127)
chr3 (12-125)||(36820210-36820323)
chr3 (48-125)||(38850012-38850089)
chr3 (49-121)||(45236778-45236850)
chr3 (8-105)||(3186707-3186806)
chr3 (81-125)||(47542032-47542076)
chr3 (8-55)||(35033136-35033183)
chr3 (10-121)||(2340961-2341074)
chr3 (48-118)||(19676377-19676447)
chr3 (8-113)||(19757829-19757937)
chr3 (38-120)||(38054614-38054696)
chr3 (8-55)||(38060421-38060468)
chr3 (24-102)||(33307087-33307165)
chr3 (60-121)||(30345445-30345506)
chr3 (48-125)||(46568034-46568111)
chr3 (74-125)||(42510324-42510375)
chr3 (74-121)||(46431984-46432031)
chr3 (8-115)||(344956-345065)
chr3 (12-121)||(31337775-31337884)
chr3 (59-121)||(48953694-48953756)
chr3 (8-94)||(54425217-54425304)
chr3 (8-87)||(38430799-38430885)
chr3 (11-96)||(39600929-39601016)
chr3 (8-52)||(50960878-50960922)
chr3 (23-110)||(37227863-37227950)
chr3 (48-125)||(49841529-49841606)
chr3 (12-67)||(31454475-31454531)
chr3 (12-55)||(3987037-3987080)
chr3 (8-55)||(38850110-38850157)
chr3 (9-36)||(48953668-48953695)
chr3 (23-58)||(54365236-54365271)
[»] scaffold0018 (2 HSPs)
scaffold0018 (8-125)||(31386-31505)
scaffold0018 (83-121)||(44193-44231)
[»] chr5 (44 HSPs)
chr5 (8-125)||(24178428-24178547)
chr5 (8-125)||(1275183-1275301)
chr5 (8-125)||(28977104-28977221)
chr5 (8-125)||(12492629-12492751)
chr5 (8-125)||(2075719-2075838)
chr5 (8-117)||(4496308-4496421)
chr5 (8-125)||(10639215-10639341)
chr5 (8-125)||(1287824-1287953)
chr5 (8-121)||(3301766-3301881)
chr5 (8-121)||(16347623-16347738)
chr5 (8-112)||(26884933-26885040)
chr5 (38-125)||(20318905-20318989)
chr5 (12-125)||(11002672-11002785)
chr5 (8-121)||(32516480-32516593)
chr5 (8-78)||(38684932-38685004)
chr5 (12-96)||(31636169-31636253)
chr5 (8-125)||(34272940-34273064)
chr5 (8-112)||(15168721-15168829)
chr5 (8-121)||(27816-27930)
chr5 (9-125)||(36215418-36215534)
chr5 (50-125)||(9234987-9235062)
chr5 (8-95)||(14665658-14665751)
chr5 (49-123)||(28186956-28187030)
chr5 (61-123)||(36200702-36200764)
chr5 (52-121)||(7678402-7678471)
chr5 (12-125)||(219702-219817)
chr5 (12-125)||(10082988-10083102)
chr5 (12-94)||(418236-418318)
chr5 (48-114)||(5305545-5305611)
chr5 (48-122)||(17340724-17340798)
chr5 (81-123)||(27998343-27998385)
chr5 (48-120)||(21952274-21952346)
chr5 (48-120)||(34039960-34040032)
chr5 (47-115)||(34194782-34194850)
chr5 (12-95)||(33667166-33667249)
chr5 (82-119)||(43558135-43558172)
chr5 (12-96)||(1174549-1174633)
chr5 (86-125)||(5848401-5848440)
chr5 (8-55)||(14667753-14667800)
chr5 (8-42)||(20456776-20456810)
chr5 (70-118)||(15489786-15489834)
chr5 (63-125)||(11729008-11729071)
chr5 (12-55)||(14749297-14749340)
chr5 (83-118)||(21093701-21093736)
[»] chr2 (42 HSPs)
chr2 (9-125)||(8180698-8180816)
chr2 (8-125)||(3865990-3866109)
chr2 (8-121)||(38429806-38429921)
chr2 (9-125)||(36183369-36183487)
chr2 (8-125)||(3243898-3244015)
chr2 (8-121)||(12734623-12734736)
chr2 (9-121)||(11992354-11992466)
chr2 (8-121)||(41763287-41763401)
chr2 (9-121)||(45367871-45367984)
chr2 (12-125)||(4807510-4807629)
chr2 (8-125)||(38452930-38453053)
chr2 (8-121)||(41197473-41197588)
chr2 (8-114)||(18424622-18424728)
chr2 (48-125)||(2610446-2610523)
chr2 (9-121)||(19337096-19337209)
chr2 (8-121)||(23997539-23997651)
chr2 (8-121)||(16097231-16097350)
chr2 (12-125)||(42092437-42092550)
chr2 (48-125)||(7825276-7825353)
chr2 (12-125)||(4598811-4598928)
chr2 (12-121)||(38434873-38434984)
chr2 (70-125)||(451931-451986)
chr2 (8-55)||(25834671-25834718)
chr2 (12-125)||(23714510-23714622)
chr2 (12-125)||(24102182-24102294)
chr2 (12-121)||(30743545-30743655)
chr2 (8-55)||(2610578-2610625)
chr2 (58-117)||(6238051-6238110)
chr2 (83-125)||(9647927-9647969)
chr2 (23-117)||(9556628-9556724)
chr2 (8-49)||(43238338-43238379)
chr2 (8-55)||(227312-227359)
chr2 (48-123)||(13149233-13149308)
chr2 (8-55)||(43752192-43752239)
chr2 (82-121)||(45077670-45077709)
chr2 (59-125)||(24583904-24583970)
chr2 (17-120)||(18188706-18188808)
chr2 (17-91)||(7615251-7615325)
chr2 (41-113)||(9578981-9579053)
chr2 (8-55)||(11412711-11412758)
chr2 (81-120)||(14255500-14255539)
chr2 (74-125)||(41779045-41779096)
[»] scaffold0157 (1 HSPs)
scaffold0157 (8-125)||(25690-25809)
[»] scaffold0024 (1 HSPs)
scaffold0024 (10-121)||(82643-82756)
[»] scaffold0113 (1 HSPs)
scaffold0113 (8-125)||(11841-11962)
[»] scaffold0036 (1 HSPs)
scaffold0036 (8-123)||(4516-4634)
[»] scaffold0570 (2 HSPs)
scaffold0570 (8-86)||(1193-1271)
scaffold0570 (80-125)||(2589-2634)
[»] scaffold0045 (1 HSPs)
scaffold0045 (48-121)||(86894-86967)
[»] scaffold0003 (1 HSPs)
scaffold0003 (50-123)||(347249-347322)


Alignment Details
Target: chr7 (Bit Score: 102; Significance: 5e-51; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 33072989 - 33072872
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  33072989 ctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcattcctaatcctatcttgtctagtcttaccactcatccaacgc 33072890  T
Q  108 aacatcctcatctctgct 125  Q
    |||||| |||||||||||    
T  33072889 aacatcatcatctctgct 33072872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 31005260 - 31005141
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  31005260 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgttattcctaatcctatcctgtctagtcttaccactcatccaac 31005161  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  31005160 gcaacatcctcatctctgct 31005141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 35906446 - 35906565
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35906446 ctattttctaccaacttttctactataggtgctacctccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaac 35906545  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  35906546 gcaacatcctcatctctgct 35906565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 11593996 - 11593878
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  11593996 tattttctaccaacttttctactataggtgctacccccactctctctcaaatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaacg 11593897  T
Q  107 caacatcctcatctctgct 125  Q
    |||||||||||||||||||    
T  11593896 caacatcctcatctctgct 11593878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 34869457 - 34869341
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  34869457 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 34869358  T
Q  106 gcaacatcctcatctct 122  Q
    |||||||||||||||||    
T  34869357 gcaacatcctcatctct 34869341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 37617978 - 37617862
Alignment:
Q  11 ttttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgca 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  37617978 ttttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcttgtctagtcttaccactcatccaacgca 37617879  T
Q  109 acatcctcatctctgct 125  Q
    |||||||||||||||||    
T  37617878 acatcctcatctctgct 37617862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 13859253 - 13859372
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  13859253 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcgtccaac 13859352  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  13859353 gcaacatcctcatctctgct 13859372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 49029313 - 49029194
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  49029313 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 49029214  T
Q  106 gcaacatcctcatctctgct 125  Q
    | ||||||||||||||||||    
T  49029213 gtaacatcctcatctctgct 49029194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 43281711 - 43281600
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||    
T  43281711 ctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcattcctaatcctatattgtctagtcttaccactcatccagcgc 43281612  T
Q  108 aacatcctcatc 119  Q
    ||||||||||||    
T  43281611 aacatcctcatc 43281600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 39906615 - 39906730
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39906615 ctattttctaccaacttttctactataggtgctaccctcactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaac 39906714  T
Q  106 gcaacatcctcatctc 121  Q
    ||| ||||||||||||    
T  39906715 gcagcatcctcatctc 39906730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 36652029 - 36651914
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||||||||||||||||||| |  || ||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36652029 ctattttctaccaacttttctactatggatgccacccctaccctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgc 36651930  T
Q  108 aacatcctcatctctg 123  Q
    ||||||||||||||||    
T  36651929 aacatcctcatctctg 36651914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 33350051 - 33350170
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||| |||||||||||||||||| || |||||||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||||     
T  33350051 ctattttctagcaacttttctactataggtgcaacccccactctctctctaatggtgtcattcttaatcctatcatgtctagtcttaccactcatccaag 33350150  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  33350151 gcaacatcctcatctctgct 33350170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 45836725 - 45836840
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||| |||||||||||||||| |    
T  45836725 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcttgtctactcttaccactcatccagc 45836824  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  45836825 gcaacatcctcatctc 45836840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 46356101 - 46356219
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca--ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  46356101 ctattttctaccaacttttctactataggtgctacccccattctctctctgatggtgtcattcctaatcctatcctgtctagtcttaccactcattcaac 46356200  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||| ||||||||||    
T  46356201 gcaacatcc-catctctgct 46356219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 12841520 - 12841639
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||||| |||||||  ||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||    
T  12841520 ctattttctaccaacttttctactataggtgctacctccactctctctctaatggggtcattcctaatcctatcatgtctagttttaccactcatccaac 12841619  T
Q  106 gcaacatcctcatctctgct 125  Q
     |||||||||||||||||||    
T  12841620 acaacatcctcatctctgct 12841639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 44855417 - 44855536
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |    
T  44855417 ctattttctaccaacttttctactataggtactatccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccagc 44855516  T
Q  106 gcaacatcctcatctctgct 125  Q
     ||||||||| |||||||||    
T  44855517 acaacatcctgatctctgct 44855536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 38607041 - 38606927
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct-aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||||| ||    
T  38607041 ctattttctaccaacctttctactataggtgctacccccactctctcttaatgttgtcattcctaatcctatcatgtctagtcttaccactcatccagcg 38606942  T
Q  107 caacatcctcatctc 121  Q
    ||||||  |||||||    
T  38606941 caacattatcatctc 38606927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 32630631 - 32630517
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| ||| || |||||||||| ||||||||||||||||||||||| |    
T  32630631 ctattttctaccaacttttctactataggtgctacccccactctctctccaatggtatca-tcctaatcctatcatgtctagtcttaccactcatccagc 32630533  T
Q  106 gcaacatcctcatctc 121  Q
     |||||||||||||||    
T  32630532 tcaacatcctcatctc 32630517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 36514456 - 36514569
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||| |||| ||  |||| |||||| || |||||||||||| ||||||||||||||    
T  36514456 tttctaccatcttttctactataggtgctaccccaactctctctaatgttgtcctttctaattctatcccgtttagtcttaccacacatccaacgcaaca 36514555  T
Q  112 tcctcatctctgct 125  Q
    ||||||||||||||    
T  36514556 tcctcatctctgct 36514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 35559238 - 35559353
Alignment:
Q  8 ctattttctaccaacttttctactata-ggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||| ||||||||||   |||  |||||||||||||||||    
T  35559238 ctattttctaccaacttttctactataaggtgctacccccactctctctcaaatggtgtcattcctaatcctatcaaatctgatcttaccactcatccaa 35559337  T
Q  105 cgcaacatcctcatct 120  Q
    ||||||||||||||||    
T  35559338 cgcaacatcctcatct 35559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 23404455 - 23404343
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctc--taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||| ||||||||||||||||| | | |||||||||||||||  |||||||||||||| |||||||||| ||| |||||||||| |||||||| |    
T  23404455 ctattttctcccaacttttctactataagtgttacccccactctctccctaatggtgtcattcctaatcctatcatgtatagtcttaccgctcatccagc 23404356  T
Q  106 gcaacatcctcat 118  Q
    |||||||||||||    
T  23404355 gcaacatcctcat 23404343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 36136802 - 36136687
Alignment:
Q  7 actattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||||  ||||||||||||| ||| |||||||  |||||||||||||| |||||||    
T  36136802 actattttctaccatcttttctactataggtgctaccccaactctctctctaatggtgtcattcctaaacctatcccttctagtcttaccacccatccaa 36136703  T
Q  105 cgcaacatcctcatct 120  Q
    | |||||| |||||||    
T  36136702 cacaacattctcatct 36136687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 36869576 - 36869653
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  36869576 ctctctctaatggtgtcattcctaatcctatcatgtccagtcttaccactcatccaacacaacatcctcatctctgct 36869653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 7273076 - 7272961
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctc--taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| | ||| |||  ||||||  ||| |||||||||| ||||||||||| || |||||||||| |||||||| |    
T  7273076 ctattttctaccaacttttctactataggtgatactcccgttctctccctaaaggtgtcattcctaatcctatcccgtgtagtcttaccgctcatccagc 7272977  T
Q  106 gcaacatcctcatctc 121  Q
     |||||||||||||||    
T  7272976 acaacatcctcatctc 7272961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 6374905 - 6374833
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctat 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||    
T  6374905 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctat 6374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 47848711 - 47848596
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||| |||| ||||||||||||||| |||||||| |||||||||  |||| | ||| |  | ||||||||| ||||||||||||||| ||||||||    
T  47848711 ctattttccaccatcttttctactataggcgctaccccaactctctctctaatgttatcacttctgatcctatcccgtctagtcttaccacacatccaac 47848612  T
Q  106 gcaacatcctcatctc 121  Q
     |||||||||||||||    
T  47848611 acaacatcctcatctc 47848596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 8492478 - 8492580
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctc--taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||| | ||| ||||||||| | |||||| | ||||||  |||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  8492478 ctattttctaccatcatttttactataggtgttaccccaaatctctccctaatggtgtcattcgtaatcctatcccgtctagtcttgccactcatccaac 8492577  T
Q  106 gca 108  Q
    |||    
T  8492578 gca 8492580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 5335953 - 5335840
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||| |||| |||| |||||||||  |||||||| ||||||||||||| | |||||  ||||   || ||||||||||||||||| ||| ||||||||||    
T  5335953 tttcgaccatctttcctactatagatgctaccccaactctctctaatgttatcatttctaattgcattctgtctagtcttaccacacattcaacgcaaca 5335854  T
Q  112 tcctcatctctgct 125  Q
    ||||||||||||||    
T  5335853 tcctcatctctgct 5335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 43491345 - 43491230
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||||||| |||| ||||||||| | |||||| ||||||||   ||||||||||||| ||||| |||||  |||| ||||||| |||||||| |    
T  43491345 ctattttctaccaatttttatactataggtgttacccctactctctccccaatggtgtcattcctaatcatatcccatctaatcttaccgctcatccagc 43491246  T
Q  106 gcaacatcctcatctc 121  Q
     |||||||||||||||    
T  43491245 acaacatcctcatctc 43491230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 24598440 - 24598509
Alignment:
Q  55 taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgc 124  Q
    |||||||||||||| |||||||||| ||||||  ||||||||||||||||| |||||||||| |||||||    
T  24598440 taatggtgtcattcctaatcctatcatgtctaaacttaccactcatccaacacaacatcctcgtctctgc 24598509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 29650421 - 29650349
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctat 78  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||  ||||||||||||| |||||||||    
T  29650421 ctattttctaccaatttttctactataggtgctgcccccactctctctcgaatggtgtcattcctaatcctat 29650349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 43282441 - 43282330
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct-----aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||| ||| |||||||||||||||| |||||||| |||||||||     |||| |||||||  ||||| |||| ||||||| |||||||| |||| ||||    
T  43282441 tttccaccgacttttctactataggtgctaccccaactctctctctctaaatgttgtcatttctaatcatatcatgtctagacttaccacacatctaacg 43282342  T
Q  107 caacatcctcat 118  Q
    ||||||||||||    
T  43282341 caacatcctcat 43282330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 46014425 - 46014499
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca--ctctctctaatggtgtcattcataatcctatcc 80  Q
    ||||||||||||||||||||||||||||| || |||||||  ||||||||||||||||||||  ||||| |||||    
T  46014425 ctattttctaccaacttttctactataggtgcaacccccactctctctctaatggtgtcatttctaatcttatcc 46014499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 2885967 - 2886013
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  2885967 ctattttctaccaacttttctactataggtgctacccccactctctc 2886013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 27021993 - 27022063
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcat 118  Q
    |||||||||||| |||||||  ||||||||||||||||||||||| ||| ||||||| ||||||| |||||    
T  27021993 ctctctctaatgttgtcatttttaatcctatcctgtctagtcttatcacacatccaatgcaacattctcat 27022063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 30200212 - 30200323
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||| |||| ||||||||||||||| | |||||  |||||||  |||| |||||||  ||||| |||||  |||| ||||||||| |||||||| |||||    
T  30200212 tttccaccatcttttctactataggtgttaccctaactctct--aatgttgtcatttctaatcatatcccatctaatcttaccacacatccaacacaaca 30200309  T
Q  112 tcctcatctctgct 125  Q
    ||||||||||||||    
T  30200310 tcctcatctctgct 30200323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 39811952 - 39811882
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcat 118  Q
    |||||||||||| |||||||  ||||||||||  ||||||||||||||| ||||||| |||||||||||||    
T  39811952 ctctctctaatgttgtcatttctaatcctatcacgtctagtcttaccacacatccaaagcaacatcctcat 39811882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 14593756 - 14593679
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||||| |||||||  |||| |  | | ||||||||||||||| ||||||||||||||||||||||||||||    
T  14593756 ctctctctaatgttgtcatttctaattcggttccgtctagtcttaccacacatccaacgcaacatcctcatctctgct 14593679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 19262682 - 19262791
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    ||||||||| ||||||||| ||||| |||||||| ||||||||||||  |||||||  |||  ||||| |||||||| |||||||  |||  ||| ||||    
T  19262682 tttctaccatcttttctacaataggtgctaccccaactctctctaatattgtcatttctaactctatcatgtctagtattaccacatatcacacgtaaca 19262781  T
Q  112 tcctcatctc 121  Q
    ||||||||||    
T  19262782 tcctcatctc 19262791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 1523811 - 1523747
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacat 112  Q
    |||||||||||||||||||| |||||||||||  ||||||||||  ||||||| |||||||||||    
T  1523811 ctctctctaatggtgtcattaataatcctatcacgtctagtcttgtcactcatgcaacgcaacat 1523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 42187507 - 42187393
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||| |||| |||||||| |||||| |||||||| |||||||  |||||| || ||||  ||||  ||||| |||||||||||| || ||||||||    
T  42187507 ctattttccaccatcttttctattataggtgctaccccgactctctttctaatgctgccatttctaata-tatcccgtctagtcttactacacatccaac 42187409  T
Q  106 gcaacatcctcatctc 121  Q
     |||||||||||||||    
T  42187408 acaacatcctcatctc 42187393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 16013245 - 16013202
Alignment:
Q  82 gtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16013245 gtctagtcttaccacacatccaacgcaacatcctcatctctgct 16013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 25579322 - 25579431
Alignment:
Q  8 ctattttctaccaacttttctactataggagctac-ccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||| ||||  |||||| |||| || ||||| |||||||||||||||||  ||||||  ||||||||||     |||| ||||||| |||||||||    
T  25579322 ctattttccaccattttttctgctatgggtgctactccccactctctctaatgtggtcatttctaatcctatc-----tagtattaccacacatccaacg 25579416  T
Q  107 caacatcctcatctc 121  Q
    |||||||||||||||    
T  25579417 caacatcctcatctc 25579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 7189521 - 7189593
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||||||||||||| ||||||||  ||||| |||||||  |||| |||| |||||||||||||||    
T  7189521 ctctctctaatggtgtcattcat-atcctatctcgtctaatcttaccggtcattcaacacaacatcctcatctc 7189593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 40139202 - 40139279
Alignment:
Q  47 actctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgc 124  Q
    ||||||||||||| |||| ||  ||||| ||||| ||||||||||||||| ||||| || |||||||||| |||||||    
T  40139202 actctctctaatgttgtcttttctaatcttatcccgtctagtcttaccacacatcccacacaacatcctcgtctctgc 40139279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 29653844 - 29653918
Alignment:
Q  51 tctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||| |||||||  |||| |||||| ||||||| ||||||| |||||||||||||| ||  |||||||||    
T  29653844 tctctaatgatgtcatttctaattctatcccgtctagtgttaccacacatccaacgcaacagccgtatctctgct 29653918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 36869489 - 36869527
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccc 46  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  36869489 ctattttctaccaacttttctactataggtgctaccccc 36869527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 1740756 - 1740715
Alignment:
Q  84 ctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  1740756 ctagtcttactacacatccaacgcaacatcctcatctctgct 1740715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 24549978 - 24550051
Alignment:
Q  52 ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||| | |||||  ||||| ||| || ||||||||||| || |||||||| |||||||||||||||||||    
T  24549978 ctctaatgttatcatttctaatcatattctatctagtcttacaacacatccaacacaacatcctcatctctgct 24550051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 48736148 - 48736256
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctcta--atggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||| ||| |||||||||| |||| |||||||| ||||||||||  |||  ||||||  ||||  ||||   |||||||||||||| ||| ||||||||    
T  48736148 tttctcccatcttttctactgtaggtgctaccccaactctctctataatgtcgtcatttctaattttatctcatctagtcttaccacacattcaacgcaa 48736247  T
Q  110 catcctcat 118  Q
    |||||||||    
T  48736248 catcctcat 48736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 25731640 - 25731696
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    |||||||||| |||||||||| ||||||| ||  |||||||||||||| ||||||||    
T  25731640 ctctctctaaaggtgtcattcttaatcctttctcgtctagtcttaccattcatccaa 25731696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 45558395 - 45558351
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctcta 56  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||    
T  45558395 tttctaccaacttttctactataggtggtaccccaactctctcta 45558351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 40008698 - 40008777
Alignment:
Q  42 cccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||| ||||||||||||| |||||||  |||| || |  |||||||| ||||||| ||||| |||||||||| |||||||    
T  40008698 ccccaactctctctaatgttgtcatttctaattcttttttgtctagttttaccacacatcctacgcaacatcttcatctc 40008777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 22349657 - 22349623
Alignment:
Q  8 ctattttctaccaacttttctactataggagctac 42  Q
    ||||||||||||||||||||||||||||| |||||    
T  22349657 ctattttctaccaacttttctactataggtgctac 22349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 27021946 - 27021984
Alignment:
Q  17 accaacttttctactataggagctacccccactctctct 55  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  27021946 accaacttttctactataggtgctaccccaactctctct 27021984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 24434654 - 24434727
Alignment:
Q  50 ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctg 123  Q
    |||||||||| |  |||| |||||  |||| |||||||| ||||||| ||| ||||||||||| ||||||||||    
T  24434654 ctctctaatgttaccatttataattttatcatgtctagtattaccacgcattcaacgcaacattctcatctctg 24434727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 28542206 - 28542243
Alignment:
Q  84 ctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  28542206 ctagtcttaccacacatccaacgcaacaccctcatctc 28542243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 31682847 - 31682883
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccc 44  Q
    ||||||||||||||||||||||||||| | |||||||    
T  31682847 ctattttctaccaacttttctactatatgtgctaccc 31682883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 36102010 - 36102129
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||| | || |||||||| |||||| ||||||  ||||||  ||| |||| |||||||  |||||  ||||  |||||||||||||| |||| |||    
T  36102010 ctattttccaacatcttttctattataggtgctaccttcactcttcctcaaatgttgtcatttctaatctcatcccatctagtcttaccacacatcgaac 36102109  T
Q  106 gcaacatcctcatctctgct 125  Q
     ||||||  |||||||||||    
T  36102110 tcaacattttcatctctgct 36102129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 5e-51; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 8671955 - 8671838
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  8671955 ctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgc 8671856  T
Q  108 aacatcctcatctctgct 125  Q
    |||||||| |||||||||    
T  8671855 aacatccttatctctgct 8671838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 1210782 - 1210663
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1210782 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaac 1210683  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  1210682 gcaacatcctcatctctgct 1210663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 696306 - 696191
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  696306 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccagc 696207  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  696206 gcaacatcctcatctc 696191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 9592771 - 9592652
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  9592771 ctattttctacaaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 9592672  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  9592671 gcaacatcctcatctctgct 9592652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 22090133 - 22090012
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct----aatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22090133 ctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 22090034  T
Q  104 acgcaacatcctcatctctgct 125  Q
    || || ||||||||||||||||    
T  22090033 acacagcatcctcatctctgct 22090012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 30202375 - 30202494
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  30202375 ctattttctaccaacctttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 30202474  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  30202475 gcaacatcctcatctctgct 30202494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 32082990 - 32083105
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |    
T  32082990 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctaccctgtctagtcttaccactcatccagc 32083089  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  32083090 gcaacatcctcatctc 32083105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 49347638 - 49347757
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49347638 ctattttctaccaacttttctactatagatgctacccctactctctctccaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaac 49347737  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||| ||||    
T  49347738 gcaacatcctcatctttgct 49347757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 51602093 - 51601983
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||    
T  51602093 ctattttctaccaacttttctactataggtgctaccctcactctctctaatggtgtcattcctaatcatatcatgtctagtcttaccactcatctaacgc 51601994  T
Q  108 aacatcctcat 118  Q
    |||||||||||    
T  51601993 aacatcctcat 51601983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 15085971 - 15085856
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||| |||| |    
T  15085971 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctatctagtcttaccactcgtccagc 15085872  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  15085871 gcaacatcctcatctc 15085856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 34792598 - 34792713
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||||    
T  34792598 tttctaccaacttttctactataggtgctacccccactctctctctaatggtttcattcctaatcctatcatgtctagtcttaccactcatccagcgcaa 34792697  T
Q  110 catcctcatctctgct 125  Q
    ||||||||||||||||    
T  34792698 catcctcatctctgct 34792713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 43240624 - 43240745
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct----ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 103  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||    ||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  43240624 ctattttctatcaatttttctactataggtgctacccccactctctctctctaatggcgtcattcataatcctatcatgtctagtcttaccactcatcca 43240723  T
Q  104 acgcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||||    
T  43240724 acgcaacatcctcatctctgct 43240745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 51441010 - 51441129
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||| |||||     
T  51441010 ctattttctaccaacttttctactataggtgttacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcgtccaat 51441109  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  51441110 gcaacatcctcatctctgct 51441129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 8391809 - 8391694
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  8391809 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcttgtgtagtcttaccactcatccaac 8391710  T
Q  106 gcaacatcctcatctc 121  Q
     ||||||| |||||||    
T  8391709 acaacatcttcatctc 8391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 4001700 - 4001814
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||  ||||||||||||||||||||| | |    
T  4001700 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctattttgtctagtcttaccactcatctagc 4001799  T
Q  106 gcaacatcctcatct 120  Q
    |||||||||||||||    
T  4001800 gcaacatcctcatct 4001814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 32231199 - 32231315
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||| |||||||||||||| | |    
T  32231199 ctattttctaccaatttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctaatcttaccactcatctagc 32231298  T
Q  106 gcaacatcctcatctct 122  Q
    |||||||||||||||||    
T  32231299 gcaacatcctcatctct 32231315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 37463118 - 37463231
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||||   ||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |     
T  37463118 ctattttctactgtcttttctactataggtgctaccccaactctctctaatggtgtcattcctaatcctaacctgtctagtcttaccactcatccaatga 37463217  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  37463218 aacatcctcatctc 37463231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 9509355 - 9509236
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||| ||||| ||||||||||||||| |||||||| |||||||||  ||||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  9509355 ctattttttaccatcttttctactataggtgctaccccaactctctctctaatggtgtcatttctaatcatatcctgtctagtcttatcactcatccaac 9509256  T
Q  106 gcaacatcctcatctctgct 125  Q
     |||||||||||||||||||    
T  9509255 acaacatcctcatctctgct 9509236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 9599639 - 9599758
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||| ||||||||||||||| | ||| || |||||  |||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  9599639 ctattttctaccatcttttctactataggtgttactccaactctctctctaatgatgtcattcctaatcatatcccgtctagtcttaccactcatccaac 9599738  T
Q  106 gcaacatcctcatctctgct 125  Q
     |||||||||||||||||||    
T  9599739 acaacatcctcatctctgct 9599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 18469327 - 18469440
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||| || ||| ||||||||||| | |||||| |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||| ||||||    
T  18469327 ctattttctatcatcttctctactataggtgttaccccaactctctctaattgtgtcattcctaatcatatcatgtctagtcttaccactcatacaacgc 18469426  T
Q  108 aacatcctcatctc 121  Q
    | |||| |||||||    
T  18469427 agcatcgtcatctc 18469440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 38807916 - 38808031
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca------ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatc 101  Q
    ||||||||||||||||||||||||||||| ||||||||||      ||||||||||||||||||||  |||| |||||| |||| ||||||||||| |||    
T  38807916 ctattttctaccaacttttctactataggtgctacccccattctctctctctctaatggtgtcatttctaattctatcccgtctggtcttaccact-atc 38808014  T
Q  102 caacgcaacatcctcat 118  Q
    |||| ||||||||||||    
T  38808015 caacacaacatcctcat 38808031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 26016470 - 26016355
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||| |||||||  |||||| | |||||| |||||||||  ||||   | ||| |||||  ||||||||||||||||||||| ||||||||||||    
T  26016470 tttctaccatcttttctcatataggtgttaccccaactctctctctaatgccattatttataattatatcctgtctagtcttaccacacatccaacgcaa 26016371  T
Q  110 catcctcatctctgct 125  Q
    ||||||||||||||||    
T  26016370 catcctcatctctgct 26016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 52561856 - 52561950
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcat 100  Q
    |||||||||| || | ||||||||| ||| |||||||| |||||  ||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  52561856 ctattttctatcatcatttctactaaaggtgctaccccaactctctctctaatggtgtcattcctaatcatatcccgtctagtcttaccactcat 52561950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 27848051 - 27848155
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||||||| ||||||||| | ||| |||||| | |||||||||  |||||||| |||| || |||||||| ||||||||||||||||||||||||     
T  27848051 tattttctaccatcttttctaccacaggtgctaccacaactctctctctaatggtgttattccta-tcctatcccgtctagtcttaccactcatccaaca 27848149  T
Q  107 caacat 112  Q
    ||||||    
T  27848150 caacat 27848155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 19936551 - 19936444
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||| ||||| | ||||||| |||||||  ||||||      |||||||||| || ||||||||  ||||||||||||||||||||||| |    
T  19936551 ctattttctaccatcttttttgctataggtgctaccctaactctc------ggtgtcattcctattcctatcccatctagtcttaccactcatccaacac 19936458  T
Q  108 aacatcctcatctc 121  Q
    ||||| ||||||||    
T  19936457 aacattctcatctc 19936444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 4380000 - 4379927
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||| |||||||  ||||| |||| | |||||||||||||| |||||||| |||||||||||||||    
T  4380000 ctctctctaatgttgtcatttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatctc 4379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 43423752 - 43423645
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtctt--accactcatccaacgc 107  Q
    |||| |||| ||||||||||||||| | |||||| |||||||||  ||||  ||||||  ||||||||||||||||||||||   |||| ||||||||||    
T  43423752 tttccaccatcttttctactataggtgttaccccaactctctctctaatgtggtcatttctaatcctatcctgtctagtcttcccccacacatccaacgc 43423653  T
Q  108 aacatcct 115  Q
    ||||||||    
T  43423652 aacatcct 43423645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 39140543 - 39140434
Alignment:
Q  22 cttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttacca-------ctcatccaacgcaacat 112  Q
    ||||||||||||||| ||||| || |||||||||  |||||| |||||| ||||||||||   |||||||||||||       |||||||||||||||||    
T  39140543 cttttctactataggtgctacgccaactctctctgtaatggtttcattcctaatcctatctcatctagtcttaccagttaccactcatccaacgcaacat 39140444  T
Q  113 cctcatctct 122  Q
    ||||||||||    
T  39140443 cctcatctct 39140434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 16142172 - 16142241
Alignment:
Q  49 tctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcat 118  Q
    |||||||||||||| ||||| | ||||||||| ||||||||||||||| ||||||||  |||||| ||||    
T  16142172 tctctctaatggtggcattcctgatcctatcccgtctagtcttaccacacatccaacataacatcttcat 16142241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 52442791 - 52442868
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||| |||| | |||||  ||||| |||| |||||||||||||||| |||||||| |||||||||||| ||||||    
T  52442791 ctctctccaatgttctcatttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcatgtctgct 52442868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 1661467 - 1661344
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattca----taatcctatcctgtctagtcttaccactcatc 101  Q
    |||||||| |||| ||||||||||||||| |||||||| |||||||||  |||  |||||||||    ||||||||||   |||||||||| ||  |||     
T  1661467 ctattttccaccatcttttctactataggtgctaccccaactctctctcaaatattgtcattcatttctaatcctatcacatctagtcttatcagacatt 1661368  T
Q  102 caacgcaacatcctcatctctgct 125  Q
    |||| ||||||| |||||||||||    
T  1661367 caacacaacatcttcatctctgct 1661344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 4029159 - 4029112
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  4029159 ctattttctaccaacttgtctactctaggtgctacccccactctctct 4029112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 34827423 - 34827462
Alignment:
Q  82 gtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  34827423 gtctagtcttaccactcatccaacacaacatcctcatctc 34827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 41611169 - 41611098
Alignment:
Q  46 cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 117  Q
    ||||||||||||| | ||||||| ||||| ||||| ||| | |||||| |||||||||||||||||| ||||    
T  41611169 cactctctctaatagcgtcattcctaatcatatcccgtccattcttactactcatccaacgcaacattctca 41611098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 18793237 - 18793345
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||| ||||||||| ||| |  ||||||| || ||||||  ||||  ||||||  || | ||||||||||||||||| |||| ||||||||||||    
T  18793237 tttctaccatcttttctacaataagtcctaccccaaccctctctttaatgtcgtcatttttagttctatcctgtctagtctttccacacatccaacgcaa 18793336  T
Q  110 catcctcat 118  Q
    |||| ||||    
T  18793337 catcatcat 18793345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 46226603 - 46226642
Alignment:
Q  82 gtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  46226603 gtctagtctcaccactcatccaacgcaacatcatcatctc 46226642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 4590813 - 4590879
Alignment:
Q  50 ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctc 116  Q
    |||||||||  |||||||  |||||||||| |||||||||| ||| | ||| |||||||||||||||    
T  4590813 ctctctaatattgtcatttctaatcctatcttgtctagtctcaccgcacattcaacgcaacatcctc 4590879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 51234611 - 51234537
Alignment:
Q  47 actctctctaatggtgtcattcataatcctatcctgtct-agtcttaccactcatccaacgcaacatcctcatct 120  Q
    ||||||||||||| ||| |||  |||||||||| ||| | ||||||||||| | |||||| ||||||||||||||    
T  51234611 actctctctaatgttgtaatttctaatcctatcatgttttagtcttaccacacgtccaacacaacatcctcatct 51234537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 16822319 - 16822376
Alignment:
Q  61 tgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcat 118  Q
    |||||||  |||||||||| | |||||| ||||||| |||||||| ||||||||||||    
T  16822319 tgtcatttctaatcctatcttatctagtattaccacacatccaacacaacatcctcat 16822376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 40419634 - 40419557
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||||| |||||||  |||| |||||   |||||| ||||||  ||| ||||||| ||||||||||||||||    
T  40419634 ctctctctaatgttgtcatttctaattctatctcatctagttttaccatacattcaacgcaccatcctcatctctgct 40419557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 2544633 - 2544589
Alignment:
Q  11 ttttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||| |||| ||||||||||||||| |||||||| |||||||||    
T  2544633 ttttccaccatcttttctactataggtgctaccccaactctctct 2544589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 17275177 - 17275137
Alignment:
Q  72 atcctatcctgtctagtcttaccactcatccaacgcaacat 112  Q
    |||||||| ||| |||||||||||| |||||||||||||||    
T  17275177 atcctatcatgtgtagtcttaccacacatccaacgcaacat 17275137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 17815469 - 17815402
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctc 116  Q
    |||||||||||  |||||||  |||| |||||| |||||||| |||||| |||||||| ||||||||||    
T  17815469 ctctctctaatattgtcatttctaatgctatcccgtctagtc-taccacacatccaacacaacatcctc 17815402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 22167643 - 22167707
Alignment:
Q  57 atggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||| ||||| ||||  |||| || ||| | |||||||||||||||||||| |||||    
T  22167643 atggtgtcattcttaatcatatctcgtcttgttttaaccctcatccaacgcaacatccttatctc 22167707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 32404850 - 32404890
Alignment:
Q  80 ctgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    ||||||| ||||||||| |||| ||||||||||||||||||    
T  32404850 ctgtctattcttaccacgcatctaacgcaacatcctcatct 32404890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 33561076 - 33561140
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcc 114  Q
    |||||||||||| |||||||   ||||||||||  | |||||||||||  |||||||||||||||||    
T  33561076 ctctctctaatgttgtcatttccaatcctatcccatttagtcttacca--catccaacgcaacatcc 33561140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 2e-50; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 36395195 - 36395314
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36395195 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaac 36395294  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  36395295 gcaacatcctcatctctgct 36395314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 36565486 - 36565605
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36565486 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaac 36565585  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||| ||||||||||||||||    
T  36565586 gcatcatcctcatctctgct 36565605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 39946894 - 39946775
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctcta--atggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39946894 ctattttctaccaacttttctactataggtgctacccccactctttctataatggtgtcattcataatcctatcatgtctagtcttaccactcatccaac 39946795  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  39946794 gcaacatcctcatctctgct 39946775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 36545186 - 36545065
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct----aatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 103  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||    ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  36545186 ctattttctaccaacttttctactataggtgttacccccactctctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatcca 36545087  T
Q  104 acgcaacatcctcatctctgct 125  Q
    || |||||||||||||||||||    
T  36545086 acacaacatcctcatctctgct 36545065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 40813361 - 40813240
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct----aatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||| |||||||||  |||||||||||||||||||||||    
T  40813361 ctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgtcattcttaatcctattatgtctagtcttaccactcatcca 40813262  T
Q  104 acgcaacatcctcatctctgct 125  Q
    || ||||||||| |||||||||    
T  40813261 acacaacatcctaatctctgct 40813240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 2796594 - 2796473
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtc--tagtcttaccactcatcca 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||| ||||  |||||||||||||||||||    
T  2796594 ctattttctaccaacttttctactataggcgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctatagtcttaccactcatcca 2796495  T
Q  104 acgcaacatcctcatctctgct 125  Q
     |||||||||||||||| ||||    
T  2796494 gcgcaacatcctcatctttgct 2796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 18125210 - 18125097
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||| |||||  |||||||||| |||    
T  18125210 ctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatttctaatcctatcatgtctcgtcttgtcactcatccagcgc 18125111  T
Q  108 aacatcctcatctc 121  Q
    ||||| ||||||||    
T  18125110 aacatgctcatctc 18125097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 18752120 - 18752233
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||  |||||||||||| ||||||| || |||    
T  18752120 ctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatccctaatcctattatgtctagtcttaacactcattcagcgc 18752219  T
Q  108 aacatcctcatctc 121  Q
    ||||| ||||||||    
T  18752220 aacattctcatctc 18752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 12492119 - 12492206
Alignment:
Q  38 gctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  12492119 gctacccccattctctctaatggtgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatatctgct 12492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 45419274 - 45419156
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||| ||||| ||||||||||||||| |||||||| | |||||||||||||||||||| ||||| |||||  ||||||||||||||| |||||||||    
T  45419274 ctattttataccatcttttctactataggtgctaccccaattctctctaatggtgtcattcctaatcttatcccttctagtcttaccactaatccaacgc 45419175  T
Q  108 aacatcctcatctctgctt 126  Q
    |||||| ||||||| ||||    
T  45419174 aacatcttcatctccgctt 45419156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 42854249 - 42854364
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctcta--atggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||| ||| ||||||| | ||||||||||||||||   |||||||||||| ||||||||| |||||||||||||||||| ||||| |    
T  42854249 ctattttctaccaacttctctgctataggtgttacccccactctctctctgatggtgtcattcctaatcctattctgtctagtcttaccacttatccagc 42854348  T
Q  106 gcaacatcctcatctc 121  Q
    |||||||| |||||||    
T  42854349 gcaacatcgtcatctc 42854364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 8879685 - 8879800
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca--ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||| ||||||  ||||||||||| ||||||||| ||||||||||  ||| |||||||||||| ||| |      
T  8879685 ctattttctaccaacttttctactataggtgcttcccccattctctctctaattgtgtcattcctaatcctatctagtccagtcttaccacttatcaagt 8879784  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||| ||||||||    
T  8879785 gcaacattctcatctc 8879800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 15215558 - 15215637
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgcttc 127  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||||    
T  15215558 ctctctctaatggtgtcatttctaatcctatcctgtatagtcttaccactcatccagcacaacatcctcatctccgcttc 15215637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 25985552 - 25985462
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatcc 102  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||| |||| ||  |||| ||||||||||| |||||||||| |||||    
T  25985552 tttctaccatcttttctactataggtgctaccccaactctctctaatgttgtcgtttctaattctatcctgtcttgtcttaccacacatcc 25985462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 13171895 - 13172011
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    ||||||| |||| ||||||||||||||| ||| |||| |||||  |||||||  |||||||  ||||||||||| |||||||||||| || ||||||| |    
T  13171895 tattttccaccatcttttctactataggtgcttccccaactctctctctaatcttgtcatttctaatcctatcccgtctagtcttactacacatccaatg 13171994  T
Q  107 caacatcctcatctctg 123  Q
    |||||| ||||||||||    
T  13171995 caacattctcatctctg 13172011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 8932739 - 8932679
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattc 68  Q
    |||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  8932739 ctattttctaccaacttttctactgtatgtgctacccccactctctctaatggtgtcattc 8932679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 29520655 - 29520583
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    |||||||||||||| |||||  |||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  29520655 ctctctctaatggtatcatttctaatcctatcccatctagtcttaccacacatccaacgcaacatcctcatct 29520583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 42493565 - 42493668
Alignment:
Q  22 cttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||||| | |||||| |||||||| |||| ||||||| | ||||| ||| || ||| ||||||||| || ||||||||||||||||||||     
T  42493565 cttttctactataggtgttaccccaactctctccaatgttgtcatttacaatccaatcttgactaatcttaccacacaaccaacgcaacatcctcatctt 42493664  T
Q  122 tgct 125  Q
    ||||    
T  42493665 tgct 42493668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 32043623 - 32043522
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||| ||||| ||||||||| | |||||| |||||||||  |||| |||||||  |||| |||||| ||||||||||||||| ||||||||||||    
T  32043623 tttctaccatcttttgtactataggtgataccccaactctctctctaatgttgtcatttctaattctatcccgtctagtcttaccacacatccaacgcaa 32043524  T
Q  110 ca 111  Q
    ||    
T  32043523 ca 32043522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 11523976 - 11524040
Alignment:
Q  15 ctaccaacttttctactataggagctaccccca--ctctctctaatggtgtcattcataatccta 77  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  11523976 ctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatccta 11524040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 25288916 - 25288820
Alignment:
Q  31 tataggagctacccccac--tctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||| |||||||||||  |||||||||||||||| ||| ||||||||||   ||||||||||||||| ||||| | |||||||||||| ||||||    
T  25288916 tataggtgctacccccacactctctctaatggtgtccttcctaatcctatctcatctagtcttaccactaatccagctcaacatcctcatatctgct 25288820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 25300251 - 25300155
Alignment:
Q  31 tataggagctacccccac--tctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||| |||||||||||  |||||||||||||||| ||| ||||||||||   ||||||||||||||| ||||| | |||||||||||| ||||||    
T  25300251 tataggtgctacccccacactctctctaatggtgtccttcctaatcctatctcatctagtcttaccactaatccagctcaacatcctcatatctgct 25300155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 37077752 - 37077687
Alignment:
Q  56 aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||| |||||||||||||||||    
T  37077752 aatggtgtcattcctaatcctatctcgtctagttttaccactcatccagcgcaacatcctcatctc 37077687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 6510676 - 6510784
Alignment:
Q  11 ttttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaac 110  Q
    ||||||||||||||||||| |||||| ||||| | | ||||||  ||||||||||||  ||||| ||||   ||||||||||||||| ||||||| ||||    
T  6510676 ttttctaccaacttttctattataggtgctacgctctctctcttcaatggtgtcatttctaatcatatctcatctagtcttaccacttatccaacacaac 6510775  T
Q  111 atcctcatc 119  Q
    ||| |||||    
T  6510776 atcatcatc 6510784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 12796945 - 12797027
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtct 90  Q
    ||||||||||||||||||||| ||||||| | |||| ||||||| ||||||||||| |||| ||||| ||| | |||||||||    
T  12796945 ctattttctaccaacttttcttctataggtgttacctccactctttctaatggtgttattcctaatcttattccgtctagtct 12797027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 21121180 - 21121105
Alignment:
Q  23 ttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccac 96  Q
    |||| ||||||||| ||||||||||||||||||  ||||||| ||||  ||||||||||| |||||||||||||||    
T  21121180 ttttgtactataggtgctacccccactctctctctaatggtgccatttctaatcctatcccgtctagtcttaccac 21121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 30748485 - 30748377
Alignment:
Q  17 accaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctc 116  Q
    |||| |||||||||||  || || ||| | ||||||| ||||| |||||||  |||||||||| |||||| ||| ||||| ||||||||| |||||||||    
T  30748485 accatcttttctactactggtgcgaccacaactctctgtaatgttgtcatttctaatcctatcatgtctaatctaaccacacatccaacgaaacatcctc 30748386  T
Q  117 atctctgct 125  Q
    || ||||||    
T  30748385 atatctgct 30748377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 39760683 - 39760788
Alignment:
Q  22 cttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatc 119  Q
    ||||||||| ||||| |||| ||| |||||  |||||||| | |||||  || ||||||| |||||| || |||||| |||||||| |||||||||||||    
T  39760683 cttttctacgataggtgctaacccaactctgtctctaatgttatcatttctactcctatcttgtctaatcctaccacacatccaacacaacatcctcatc 39760782  T
Q  120 tctgct 125  Q
    ||||||    
T  39760783 tctgct 39760788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 30783331 - 30783400
Alignment:
Q  52 ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||| |||||||  |||||||||||| ||||||||| ||||  ||||||||||| |||||||||||    
T  30783331 ctctaatgttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaagatcctcatctc 30783400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 36069639 - 36069570
Alignment:
Q  47 actctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctc 116  Q
    ||||||||||||| |||| ||  ||||| ||||| ||||||||||||||| |||||||| ||||||||||    
T  36069639 actctctctaatgttgtcgtttctaatcttatcccgtctagtcttaccacacatccaacacaacatcctc 36069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 13986531 - 13986416
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||||||  |||| ||||||||| |||||||| | || ||||  |||| |||||||| ||||  ||||  ||||||| ||||||||||||||      
T  13986531 ctattttctaccatattttgtactataggtgctaccccaaatccctctttaatgatgtcattcctaattatatctcgtctagtattaccactcatccagt 13986432  T
Q  106 gcaacatcctcatctc 121  Q
    | ||||||||||||||    
T  13986431 gtaacatcctcatctc 13986416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 16351411 - 16351312
Alignment:
Q  24 tttctactataggagctaccccca--ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||| |||||||  |  |||||||||||| |||||||  |||  |||| | |||||||||||||||  ||||||||||||||| |||||||    
T  16351411 tttctactataggtgctaccctaattctctctctaatgttgtcatttctaactctattccgtctagtcttaccacatatccaacgcaacatcttcatctc 16351312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 30456461 - 30456575
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccact--ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||| ||||||||||||||| || || |  |||  ||||||||||  ||||||  |||| ||||||  | | |||||||||| ||||||||||||    
T  30456461 tttctaccatcttttctactataggtgcaactcgaactatctctctaatgtcgtcatttctaattctatcccat-tggtcttaccacacatccaacgcaa 30456559  T
Q  110 catcctcatctctgct 125  Q
    ||||||||||||||||    
T  30456560 catcctcatctctgct 30456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 44681285 - 44681387
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccact--ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    ||||||| |||| |||||||| |||||| |||||| | |||  |||||||||| |||||||  ||||| ||||  ||||||||||||||| ||||||| |    
T  44681285 tattttccaccatcttttctattataggtgctaccacaactgtctctctaatgttgtcatttctaatcttatctcgtctagtcttaccacacatccaatg 44681384  T
Q  107 caa 109  Q
    |||    
T  44681385 caa 44681387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 16252966 - 16252860
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||||| || ||||||| | |||||||| ||| | ||||||||||||| |||||||  ||||  ||||   |||| ||||||||| |||||||| |||||    
T  16252966 tttctatcatcttttcttccataggagcaacctcaactctctctaatgttgtcatttctaattttatctcatctaatcttaccacacatccaacacaaca 16252867  T
Q  112 tcctcat 118  Q
    |||||||    
T  16252866 tcctcat 16252860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 29735802 - 29735728
Alignment:
Q  48 ctctctctaa-tggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||| |||||| |||| |||| || ||  |||||||||||||| ||||||||| |||||||||||||||    
T  29735802 ctctctctaaatggtgttattcttaattctttctcgtctagtcttaccattcatccaacacaacatcctcatctc 29735728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 5908675 - 5908564
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    |||| |||| |||||||||||||||  ||||||| |||||||||  |||| |||||||  ||||| ||||| ||||||||||   || ||||||| |||     
T  5908675 tttcaaccatcttttctactataggttctaccccaactctctctctaatgttgtcatttctaatcttatcccgtctagtcttgaaacacatccaaggcag 5908576  T
Q  110 catcctcatctc 121  Q
    || |||||||||    
T  5908575 cagcctcatctc 5908564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 10080192 - 10080264
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    |||||||||||| |||||||  ||||| ||||  ||||||||||||||  || ||||||||||||| ||||||    
T  10080192 ctctctctaatgttgtcatttctaatcttatctcgtctagtcttaccaaacacccaacgcaacatcatcatct 10080264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 16705788 - 16705700
Alignment:
Q  17 accaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||| ||||| ||||||||  ||||| || ||||||||||||| |||||||  |||| ||||||  |||||||||||||| || |||||    
T  16705788 accatcttttttactatagatgctactccaactctctctaatgttgtcatttctaattctatcccatctagtcttaccacacaaccaac 16705700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 30113442 - 30113557
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccc--cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||| ||||||||||||| | | ||||||  | |||||||||||  |||||||||||||| |||| | |||| ||||| ||  |||| | |    
T  30113442 ctattttctaccatcttttctactatatgtgttaccccgactctctctctaataatgtcattcataatcttatcatatctattcttaacaaacatctagc 30113541  T
Q  106 gcaacatcctcatctc 121  Q
     |||||| ||||||||    
T  30113542 acaacattctcatctc 30113557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 12491383 - 12491418
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacc 43  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12491383 ctattttctaccaacttttctactataggtgctacc 12491418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 25439470 - 25439394
Alignment:
Q  38 gctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctc 116  Q
    ||||||||||||||||  |||||| || ||| || |||||||   ||||||||||||||| ||||| ||||||||||||    
T  25439470 gctacccccactctct--aatggtatcgttcctattcctatctcatctagtcttaccactaatccagcgcaacatcctc 25439394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 2518637 - 2518749
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccact--ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||| |||| ||||||||||  ||| |||||||| | |  |||||||||  |||||||  ||||||||||   |||||||||||||| |||||||     
T  2518637 ctattttccaccatcttttctacttgaggtgctaccccaattttctctctaatt-tgtcatttctaatcctatctcatctagtcttaccacacatccaat 2518735  T
Q  106 gcaacatcctcatc 119  Q
    ||||||| ||||||    
T  2518736 gcaacattctcatc 2518749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 7046362 - 7046285
Alignment:
Q  17 accaacttttctactataggagctaccc--ccactctctctaatggtgtcattcataatcctatcctgtctagtctta 92  Q
    |||| ||||||||| || || |||||||  || |||||||||||| |||||||  |||||||||| ||||||||||||    
T  7046362 accatcttttctacgattggtgctacccagcctctctctctaatgttgtcatttctaatcctatcatgtctagtctta 7046285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 9695664 - 9695583
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctcta--atggtgtcattcataatcctatcctgtctagtctt 91  Q
    |||| |||| ||||||||||||||| |||||||| | | ||||||  ||| |||||||  |||| |||||||||||||||||    
T  9695664 tttccaccatcttttctactataggtgctaccccaaatatctctataatgttgtcatttctaattctatcctgtctagtctt 9695583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 43732527 - 43732485
Alignment:
Q  83 tctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||    
T  43732527 tctagtcttaccacacatccaacgtaacatcctcatttctgct 43732485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 39953591 - 39953628
Alignment:
Q  88 tcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  39953591 tcttaccacacatccaacgcaacattctcatctctgct 39953628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 39051137 - 39051065
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    ||||||| |||  |||||||  |||| ||||| ||||| |||||||||| |||| ||| ||||||||||||||    
T  39051137 ctctctcgaatattgtcatttctaattctatcatgtcttgtcttaccacacatctaacacaacatcctcatct 39051065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 9905187 - 9905246
Alignment:
Q  62 gtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||  |||||| |||| |||||| |  ||||||| ||||||||||||||||    
T  9905187 gtcattcataattatatcctttctattcttactagacatccaatgcaacatcctcatctc 9905246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 16917173 - 16917102
Alignment:
Q  54 ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||| |||||||  ||||||||||| | | |||||||||||  |  ||||||||||| ||||||||||||    
T  16917173 ctaatgttgtcatttttaatcctatccagccgagtcttaccacaaagtcaacgcaacattctcatctctgct 16917102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 36143342 - 36143287
Alignment:
Q  70 taatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||   |||||||||||||| |  ||||| |||||||||||||||||||    
T  36143342 taatcctatctcatctagtcttaccacacgaccaacacaacatcctcatctctgct 36143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 2e-50; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 31960059 - 31960178
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31960059 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaac 31960158  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  31960159 gcaacatcctcatctctgct 31960178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 48622788 - 48622905
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||    
T  48622788 ctattttctaccaacttttctactatgggtgctacccccactctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaaagc 48622887  T
Q  108 aacatcctcatctctgct 125  Q
    ||||||||||||||||||    
T  48622888 aacatcctcatctctgct 48622905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 12494787 - 12494668
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  12494787 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 12494688  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  12494687 gcaacatcctcatctctgct 12494668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 436266 - 436147
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  436266 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcttaatcctatcatgtctagtcttacgactcatccaac 436167  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  436166 gcaacatcctcatctctgct 436147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 33227246 - 33227127
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||| |    
T  33227246 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcttaatcctatcatgtctagtcttaccactcatccagc 33227147  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  33227146 gcaacatcctcatctctgct 33227127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 4440890 - 4440773
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |||||    
T  4440890 ctattttctaccaacttttctactataggtgctgcccccactctctctaatggtgccattcctaatcctatcatgtctagtcttaccactcatcgaacgc 4440791  T
Q  108 aacatcctcatctctgct 125  Q
    |||||||| |||||||||    
T  4440790 aacatcctaatctctgct 4440773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 33191093 - 33191212
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||| |||| |||||||||||||||| |    
T  33191093 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctatctaatcttaccactcatccagc 33191192  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  33191193 gcaacatcctcatctctgct 33191212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 52569760 - 52569879
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  52569760 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtctagtcttacccctcatccaac 52569859  T
Q  106 gcaacatcctcatctctgct 125  Q
     ||||||||| |||||||||    
T  52569860 acaacatcctgatctctgct 52569879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 1777262 - 1777379
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||| ||||||||| ||||   |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  1777262 ctattttctaccaacttttttactataggtgctatttccactctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgc 1777361  T
Q  108 aacatcctcatctctgct 125  Q
    ||||||||||||| ||||    
T  1777362 aacatcctcatctttgct 1777379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 48174338 - 48174457
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  48174338 ctattttctaccaacttttctactataggtgttacccccactctctctctaatggtgtcattcctaatcatatcatgtctagtcttaccactcatccaac 48174437  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||| ||||    
T  48174438 gcaacatcctcatctttgct 48174457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 53707831 - 53707712
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||  ||||||||||||||| || ||||||| ||||||||||||| |||||||||||    
T  53707831 ctattttctaccaacttttctactataggtgctacctccactctctttctaatggtgtcattcctagtcctatcatgtctagtcttactactcatccaac 53707732  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  53707731 gcaacatcctcatctctgct 53707712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 56375324 - 56375208
Alignment:
Q  11 ttttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgca 108  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||  ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  56375324 ttttctaccaacttttctattataggtgctacccctactctctctctaatggtgtcattcctaatcttatcttgtctagtcttaccactcatccaacgca 56375225  T
Q  109 acatcctcatctctgct 125  Q
    |||||||||||||||||    
T  56375224 acatcctcatctctgct 56375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 27450424 - 27450533
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    || ||||| ||||||||||||||||||||||| |||    
T  27450424 ctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcatt----attctatcatgtctagtcttaccactcatccagcgc 27450519  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  27450520 aacatcctcatctc 27450533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 43433961 - 43433836
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--------aatggtgtcattcataatcctatcctgtctagtcttaccactca 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||| |||||||||| ||||||||||| |||||||    
T  43433961 ctattttctaccaacttttctactataggtgctacccccactctctctctctctctaatggtgtcattcctaatcctatcttgtctagtcttgccactca 43433862  T
Q  100 tccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||||||||    
T  43433861 tccaacgcaacatcctcatctctgct 43433836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 23906540 - 23906665
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--------ctctaatggtgtcattcataatcctatcctgtctagtcttaccactca 99  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||        ||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  23906540 ctattttctacaaacttttctactataggtgctacccccactctctctctctctctaatggtgtcattcctaatcctatcttgtctagtcttgccactca 23906639  T
Q  100 tccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||||||||    
T  23906640 tccaacgcaacatcctcatctctgct 23906665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 46583069 - 46583188
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||||||| ||||||||| ||||||||||||||||||  || ||     
T  46583069 ctattttctaccaacttttctactataggtgctatccccactctctctcgaatggtgtcattcctaatcctatgctgtctagtcttaccacttctctaat 46583168  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  46583169 gcaacatcctcatctctgct 46583188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 47265447 - 47265566
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctcta--atggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||| | ||||||||||||||| | |||||||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||| |    
T  47265447 ctattttctactaccttttctactataggtgttacccccactctctctataatggtgtcattcataatcttatcatgtctagtcttaccactcatccagc 47265546  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||| ||||    
T  47265547 gcaacatcctcatctttgct 47265566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 37773696 - 37773811
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccc-actctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||||||| |||||||||||||||| ||||||||  ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||    
T  37773696 ctattttctaccgacttttctactataggtgctaccccttactctctctaatggtatcattcataattctatcatgtctagtcttaccactcatccagcg 37773795  T
Q  107 caacatcctcatctct 122  Q
    |||||| |||||||||    
T  37773796 caacattctcatctct 37773811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 28236220 - 28236103
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| | |||| |||||||| |||||||| ||    
T  28236220 ctattttccaccaacttttctactataggtgctacccccactctctctaatggtgtcattcctaatcctatcatatctaatcttaccattcatccaatgc 28236121  T
Q  108 aacatcctcatctctgct 125  Q
    | |||| | |||||||||    
T  28236120 agcatcataatctctgct 28236103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 39100780 - 39100893
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||    |||    
T  39100780 ctattttctatcaacttttcttctataggtgctacccccactctctctaatggtgtcattcctaatcctatcatttctagtcttaccactcatttggcgc 39100879  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  39100880 aacatcctcatctc 39100893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 45205092 - 45205208
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca-ctctctc--taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    ||||||||||||| |||||||||||||||  ||||||||| |||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  45205092 ctattttctaccatcttttctactataggcactacccccaactctctcgttaatggtgtcattcctaatcctatcccgtctagtcttaccactcatccaa 45205191  T
Q  105 cgcaacatcctcatctc 121  Q
    | |||||||||||||||    
T  45205192 cacaacatcctcatctc 45205208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 50286999 - 50286889
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||||||||||||||||||||||        || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  50286999 ctattttctaccaacttttctactataggt-------cccctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgc 50286907  T
Q  108 aacatcctcatctctgct 125  Q
    ||| ||||||||||||||    
T  50286906 aacttcctcatctctgct 50286889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 31459067 - 31458946
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccac----tctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 103  Q
    ||||||||||||| ||||||||||||||| |||||| | ||    ||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||    
T  31459067 ctattttctaccatcttttctactataggtgctacctcgactctgtctctctaatggtatcattcctaatcctatcatgtctagtcttaccactcaacca 31458968  T
Q  104 acgcaacatcctcatctctgct 125  Q
    ||||||||||||||||| ||||    
T  31458967 acgcaacatcctcatctgtgct 31458946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 37797889 - 37797783
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||  ||||| |||| |||||||||||| ||||||||||||    
T  37797889 ctattttctaccaacttttctactataggtgctacctccactctctctctaatggtgtcatttctaatcttatcatgtctagtcttatcactcatccaac 37797790  T
Q  106 gcaacat 112  Q
    |||||||    
T  37797789 gcaacat 37797783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 27983230 - 27983122
Alignment:
Q  15 ctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacat 112  Q
    |||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||| |||||||||| ||| ||||||||||||||||| | | ||| ||    
T  27983230 ctaccaacttttctactataggtgctaccctcactctctctctaatggtgtcattcctaatcctatcatgtatagtcttaccactcatctagcacaatat 27983131  T
Q  113 cctcatctc 121  Q
    |||||||||    
T  27983130 cctcatctc 27983122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 35690326 - 35690226
Alignment:
Q  23 ttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    |||||||||||||| |||||||| |||||||||  || |||||||||| ||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  35690326 ttttctactataggtgctaccccaactctctctttaaaggtgtcattcctaatcctatctcgtctagtcttactactcatccaacgcaacatcctcatct 35690227  T
Q  121 c 121  Q
    |    
T  35690226 c 35690226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 1793496 - 1793382
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctc--taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||  |||||||||||||| ||||| ||||| ||  |||||||||  |||||||||     
T  1793496 tattttctaccaacttttttactataggtgctacccccgctctctccctaatggtgtcattcctaatcttatcccgttaagtcttaccgttcatccaaca 1793397  T
Q  107 caacatcctcatctc 121  Q
    |||||||||||||||    
T  1793396 caacatcctcatctc 1793382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 1211638 - 1211747
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgca 108  Q
    ||||| |||||||||| | ||||||||| ||| | ||||||||||| ||||||||||||| ||||| |||| |||||||| ||||||||||||||  |||    
T  1211638 tatttcctaccaacttgtttactataggtgctgctcccactctctcgaatggtgtcattcctaatcatatcatgtctagttttaccactcatccagtgca 1211737  T
Q  109 acatcctcat 118  Q
    ||||||||||    
T  1211738 acatcctcat 1211747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 51421767 - 51421666
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||| || ||  ||||||||| | |||||||| || ||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||    
T  51421767 ctattttctatcatctaatctactatatgtgctaccccaacactctctaatggtgtcattcataatcctatctcgtctagtcttactactcatccaacgc 51421668  T
Q  108 aa 109  Q
    ||    
T  51421667 aa 51421666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 41009598 - 41009707
Alignment:
Q  11 ttttctaccaacttttctactataggagctacccccactctctc--taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgca 108  Q
    |||| ||||||||||||||||||||| |||||||||| | ||||  ||||| |||||||  |||||||| | ||||||||||||||  ||||||||||||    
T  41009598 ttttttaccaacttttctactataggtgctacccccattatctccctaatgatgtcatttctaatcctaccatgtctagtcttaccgatcatccaacgca 41009697  T
Q  109 acatcctcat 118  Q
    ||||||||||    
T  41009698 acatcctcat 41009707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 20591546 - 20591662
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||  ||||  || | |||||||||||| | ||||||| |     
T  20591546 tattttctaccaacttttctactataagtgctacccccactctctccctaatggtgtcattctcaatctaattccgtctagtcttactattcatccagca 20591645  T
Q  107 caacatcctcatctctg 123  Q
    |||||||||||| ||||    
T  20591646 caacatcctcatatctg 20591662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 10775671 - 10775786
Alignment:
Q  12 tttctaccaacttttctactataggagctacccc--cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||| ||||||||||||||| | ||||||  |||||||||||||| |||||||  |||| || |||||||| ||| | |||| |||||||| |||    
T  10775671 tttctaccatcttttctactataggtgttaccccaacactctctctaatgttgtcatttctaattctttcctgtctggtcctgccacgcatccaacacaa 10775770  T
Q  110 catcctcatctctgct 125  Q
    |||| |||||||||||    
T  10775771 catcatcatctctgct 10775786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 17900513 - 17900398
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactc--tctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||  ||||||||||||||| |||||||| ||||  |||||||||  ||||||  ||||  |||||  |||||||||||||| ||||||||||||    
T  17900513 tttctaccgtcttttctactataggtgctaccccaactccgtctctaatgtcgtcatttctaattttatcccatctagtcttaccacacatccaacgcaa 17900414  T
Q  110 catcctcatctctgct 125  Q
    ||||||||| ||||||    
T  17900413 catcctcatttctgct 17900398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 43070029 - 43070128
Alignment:
Q  24 tttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctg 123  Q
    ||||||||||||| |||||| | |||||||  |||| |||||||  ||||||||||||||||| ||||||||| |||||||| ||||||  |||||||||    
T  43070029 tttctactataggcgctacctcaactctct--aatgttgtcatttctaatcctatcctgtctaatcttaccacacatccaacccaacatgatcatctctg 43070126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 33709957 - 33709837
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcct-----gtctagtcttaccactcatccaa 104  Q
    |||| |||| ||||||||||||||| | |||||| |||||||||  |||| || ||||  ||||||||||||     ||||||||||||||| |||||||    
T  33709957 tttccaccatcttttctactataggtgttaccccaactctctctctaatgttgccatttctaatcctatcctatcatgtctagtcttaccacacatccaa 33709858  T
Q  105 cgcaacatcctcatctctgct 125  Q
    ||||||||| |||||||||||    
T  33709857 cgcaacatcatcatctctgct 33709837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 54470240 - 54470128
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    |||| |||| ||||||||||||||| |||||||| |||||||||  |||| ||| |||   |||| |||||  |||||||||||||| ||||||| ||||    
T  54470240 tttccaccatcttttctactataggtgctaccccaactctctctctaatgttgttatttcaaatcatatcccatctagtcttaccacacatccaatgcaa 54470141  T
Q  110 catcctcatctct 122  Q
    |||||||||||||    
T  54470140 catcctcatctct 54470128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 49987465 - 49987346
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||| |||| ||||||||||||||| |  ||||  |||||||  |||||| |||||||  |||||||||| ||||||||||||| |  ||| ||||    
T  49987465 ctattttccaccatcttttctactataggtgtgacccagactctctatctaatgttgtcatttctaatcctatcatgtctagtcttactaaacattcaac 49987366  T
Q  106 gcaacatcctcatctctgct 125  Q
     |||||||||||||||||||    
T  49987365 acaacatcctcatctctgct 49987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 56225103 - 56224983
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtct---agtcttaccactcatccaa 104  Q
    ||||||||||||| ||||| |||||||||   || ||| ||| ||||| |||||||||||| ||||| |||| |||||    |||||||||||||||||     
T  56225103 ctattttctaccatcttttatactataggtattatcccaactttctcttatggtgtcattcctaatcatatcatgtcttagtgtcttaccactcatccac 56225004  T
Q  105 cgcaacatcctcatctctgct 125  Q
    | ||||||| |||||||||||    
T  56225003 cacaacatcatcatctctgct 56224983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 2588970 - 2588905
Alignment:
Q  54 ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatc 119  Q
    |||||| |||||||  |||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  2588970 ctaatgttgtcatttctaatcctatcccttctagtcttaccacacatccaacgcaacatcctcatc 2588905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 16002965 - 16002857
Alignment:
Q  7 actattttctaccaacttttctactataggagctacccccactctctcta--atggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    ||||||||||| |||||||| ||| ||||| || | || ||||| |||||  |||||||||||| |||||||||   ||||||||||||||||||||||     
T  16002965 actattttctatcaacttttataccataggtgccatcctcactcactctataatggtgtcattcctaatcctatttcgtctagtcttaccactcatccag 16002866  T
Q  105 cgcaacatc 113  Q
    | |||||||    
T  16002865 cacaacatc 16002857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 20601891 - 20602003
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||| | | || | |||||||||  ||| |||||||||||  ||| ||||| ||| | |||||| | |||||||| |    
T  20601891 ctattttctaccaacttttctactataagtgttatctccactctctccctagtggtgtcattctcaattctatcatgtattgtcttagcgctcatccagc 20601990  T
Q  106 gcaacatcctcat 118  Q
    |||||||||||||    
T  20601991 gcaacatcctcat 20602003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 45423648 - 45423542
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    ||||||||| |||||||| |||||| |||||| | ||||| |  |||| |||||||  |||| |||||| ||||||||||||||| || ||||| |||||    
T  45423648 tttctaccatcttttctattataggtgctacctcaactctat--aatgttgtcatttctaattctatcccgtctagtcttaccacacaaccaacacaaca 45423551  T
Q  112 tcctcatct 120  Q
    |||||||||    
T  45423550 tcctcatct 45423542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 51252710 - 51252823
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||| |||| ||||||||||| ||| |||||||| |||||||||||||  ||||||  ||||||||||  |||||||||||| || |||| ||| ||| |    
T  51252710 tttccaccatcttttctactagaggtgctaccccaactctctctaatgtagtcatttctaatcctatctcgtctagtcttacgacacatctaacacaaaa 51252809  T
Q  112 tcctcatctctgct 125  Q
    ||||| || |||||    
T  51252810 tcctcctccctgct 51252823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 7092465 - 7092583
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||| ||  |||||||||||||| ||||  || |||||  |||||||  |||||||| ||||| |||||  ||||| ||||||||||||||| |    
T  7092465 ctattttctatcatattttctactataggtgctattccaactctgtctctaatcatgtcattc-taatcatatcccttctagacttaccactcatccagc 7092563  T
Q  106 gcaacatcctcatctctgct 125  Q
     |||||||||||||||||||    
T  7092564 acaacatcctcatctctgct 7092583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 44047598 - 44047709
Alignment:
Q  13 ttctaccaacttttctactataggagctacccc--cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaac 110  Q
    |||||||| ||||||||||||||| ||||||||  | |||||||||||| |||||||  |||| |||||| | ||| || |||||| ||| ||| |||||    
T  44047598 ttctaccaccttttctactataggtgctaccccaactctctctctaatgttgtcatttctaattctatcccgcctaatcctaccacgcattcaatgcaac 44047697  T
Q  111 atcctcatctct 122  Q
    |||||| |||||    
T  44047698 atcctcgtctct 44047709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 18966541 - 18966474
Alignment:
Q  55 taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctct 122  Q
    ||||| ||||||| ||||||||||  |||||| ||||||||| |||||||||||||||| ||||||||    
T  18966541 taatgttgtcatttataatcctattttgtctaatcttaccacacatccaacgcaacatcttcatctct 18966474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 26037750 - 26037797
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  26037750 ctattttctaccaacttttctactataggtgctaccctcactctctct 26037797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 25967554 - 25967623
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 117  Q
    ||||||||||||  ||||||  |||||||| | |||||||||||||||| |||||| |||||||||||||    
T  25967554 ctctctctaatgtagtcatttctaatcctaccatgtctagtcttaccacacatccatcgcaacatcctca 25967623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 31403276 - 31403384
Alignment:
Q  23 ttttctactataggagctacccccactct------ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctc 116  Q
    |||||||||||||| |||||||| |||||      |||||||| |||||||  ||||||||||| ||||| ||| ||||| ||| |||| ||||||| ||    
T  31403276 ttttctactataggtgctaccccaactctatctgtctctaatgttgtcatttctaatcctatcccgtctaatctcaccacacattcaactcaacatcatc 31403375  T
Q  117 atctctgct 125  Q
    |||||||||    
T  31403376 atctctgct 31403384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 41192869 - 41192763
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct----aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||| |||| |||||||||| |||| |||||||| |||||||||    || | ||||||| |||||  ||||||||||| || |||||| ||||||||||    
T  41192869 tttccaccatcttttctactgtaggtgctaccccaactctctctctctaacgctgtcatttataattgtatcctgtctaatcataccacacatccaacgc 41192770  T
Q  108 aacatcc 114  Q
    |||||||    
T  41192769 aacatcc 41192763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 20192069 - 20191990
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtc 89  Q
    ||||||||| |||||||||||||||| | |||||||||||||||| | ||  || || | |||||||||||||||||||||    
T  20192069 tattttctatcaacttttctactataagtgctacccccactctct-ttattttgacaattataatcctatcctgtctagtc 20191990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 25257831 - 25257943
Alignment:
Q  13 ttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacat 112  Q
    |||||||| ||||| || | |||| | |||| | ||||||||||||| |||||||  |||| ||||| ||||||||||||| || |||||||| |||||     
T  25257831 ttctaccatcttttatattgtaggtgttacctcaactctctctaatgttgtcatttctaattctatcatgtctagtcttactacacatccaacacaacaa 25257930  T
Q  113 cctcatctctgct 125  Q
     ||||||| ||||    
T  25257931 gctcatctttgct 25257943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 39708470 - 39708412
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtc 64  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||  |||||||||||    
T  39708470 ctattttctaccaacttttatactacaggagctaccctcactctctccctaatggtgtc 39708412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 20105761 - 20105831
Alignment:
Q  51 tctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||| |||||||  ||||| ||||  ||||||||||||||| |||||| ||||||||| |||||||    
T  20105761 tctctaatgttgtcatttctaatcatatctcgtctagtcttaccacacatccatcgcaacatcatcatctc 20105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 10209067 - 10208977
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    ||||| ||| |||||||||||||||  ||||||| |||||||  |||| |||||||  |||| ||||||  |||||||||||||| |||||||    
T  10209067 tttctgccatcttttctactataggttctaccccaactctct--aatgttgtcatttctaattctatcccatctagtcttaccacacatccaa 10208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 50662420 - 50662311
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||| |||| ||||||||||||||| | | |||  ||||||||||||| |||||||   |||||||||   | |||||||||||| ||||| || |||||    
T  50662420 tttccaccatcttttctactataggtgttgcccaaactctctctaatgctgtcatttccaatcctatctcatatagtcttaccacacatcctacacaaca 50662321  T
Q  112 tcctcatctc 121  Q
    ||||| ||||    
T  50662320 tcctcgtctc 50662311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 42293579 - 42293621
Alignment:
Q  82 gtctagtcttaccactcatccaacgcaacatcctcatctctgc 124  Q
    ||||||||||||||| |||||||| |||||||| |||||||||    
T  42293579 gtctagtcttaccacgcatccaacacaacatccccatctctgc 42293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 44667520 - 44667602
Alignment:
Q  39 ctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||| ||||||||||||  ||||| |  |||| ||||| |||||||| ||||| |  |||||||||||||| ||||||||    
T  44667520 ctaccccaactctctctaatattgtcacttctaatactatcttgtctagtattaccgcatatccaacgcaacattctcatctc 44667602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 44686845 - 44686927
Alignment:
Q  39 ctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||| ||||||||||||| ||||| |  |||| ||||| |||||||| ||||| |  ||||||| |||||| ||||||||    
T  44686845 ctaccccaactctctctaatgttgtcacttctaatactatcttgtctagtattaccgcatatccaacacaacattctcatctc 44686927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 44860814 - 44860772
Alignment:
Q  83 tctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||||||| |||||||| |||||||||||| ||||||    
T  44860814 tctagtcttaccacacatccaacacaacatcctcatttctgct 44860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 11389687 - 11389638
Alignment:
Q  76 tatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||| ||||||| ||||||| |||||||  |||||||||||||||||||    
T  11389687 tatcccgtctagttttaccacacatccaatccaacatcctcatctctgct 11389638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 34233291 - 34233393
Alignment:
Q  23 ttttctactataggagctacccccactc----tctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcat 118  Q
    |||||||||||||| |||| ||| ||||    ||||||||| |||| ||  ||||||||||   |||||||||| ||| |||||||| ||||||| ||||    
T  34233291 ttttctactataggtgctatcccaactctctatctctaatgttgtcgtttctaatcctatcacatctagtcttatcacacatccaacacaacatcatcat 34233390  T
Q  119 ctc 121  Q
    |||    
T  34233391 ctc 34233393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 21106972 - 21106908
Alignment:
Q  55 taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatc 119  Q
    ||||| |||||||  |||| |||||  ||||||||||||||| |||| ||| |||||||||||||    
T  21106972 taatgttgtcatttctaattctatcacgtctagtcttaccacacatcgaacccaacatcctcatc 21106908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 25755289 - 25755237
Alignment:
Q  71 aatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctg 123  Q
    |||| |||| |||||||||||||||| |||| ||| |||||| ||||||||||    
T  25755289 aatcatatcatgtctagtcttaccacacatctaacacaacattctcatctctg 25755237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 4137018 - 4137057
Alignment:
Q  81 tgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    |||||||||||||||| |||||||| ||| ||||||||||    
T  4137018 tgtctagtcttaccacacatccaacacaaaatcctcatct 4137057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 35555896 - 35555939
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||| ||||||||||||||| |||||||  |||||||||    
T  35555896 tttctaccatcttttctactataggtgctacccgaactctctct 35555939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 44360120 - 44360077
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||| ||||||||||||||| | |||||| |||||||||    
T  44360120 tttctaccatcttttctactataggtgataccccaactctctct 44360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 45094471 - 45094522
Alignment:
Q  70 taatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||| ||||| |||||||| |||| || |||||||| |||||||||||||||    
T  45094471 taatactatcttgtctagtattactacacatccaacacaacatcctcatctc 45094522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 4e-48; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 28085413 - 28085294
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  28085413 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcgtaatcctatcatgtctagtcttaccactcatccaac 28085314  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  28085313 gcaacatcctcatctctgct 28085294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 608194 - 608081
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||     
T  608194 ctattttctatcaacttttctactataggtgataccctcactctctctaatggtgtcattcctaatcctatcctatctagtcttaccactcatccaacgg 608095  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  608094 aacatcctcatctc 608081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 14030844 - 14030724
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccact--ctctctaatggtgtcattcataatcctatcctgtctagtctt-accactcatccaa 104  Q
    ||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||     
T  14030844 ctattatctaccaacttttctactataggtgctacccccactatctctctaatggtgtcattcctaatcctatcctgtctagtcttaaccactcatccat 14030745  T
Q  105 cgcaacatcctcatctctgct 125  Q
    |||||||||||||||||||||    
T  14030744 cgcaacatcctcatctctgct 14030724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 20427881 - 20427996
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||||| ||| ||||||||||||| |    
T  20427881 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcctgtcttgtcctaccactcatccagc 20427980  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  20427981 gcaacatcctcatctc 20427996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 5258393 - 5258506
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct----aatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    || ||||||||||||||||||||| |||||||||||||||||||||||    
T  5258393 ctattttctaccaacttttctactataggtgctacccccactctctctctctaacggtgtcattcataatcctatcttgtctagtcttaccactcatcca 5258492  T
Q  104 acgcaacatcctca 117  Q
    ||||||||| ||||    
T  5258493 acgcaacattctca 5258506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 32755958 - 32755837
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct----aatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||| ||||  |||| |||||||||||||||||||||||    
T  32755958 ctattttctaccaacttttctactataggtgctacccccactctctctctctaatggtgtcattcctaatattatcatgtctagtcttaccactcatcca 32755859  T
Q  104 acgcaacatcctcatctctgct 125  Q
    || |||||||||||||||||||    
T  32755858 acacaacatcctcatctctgct 32755837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 9706813 - 9706698
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||      
T  9706813 ctattttctaccaacttttctacaataggtgctacctccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccagt 9706714  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  9706713 gcaacatcctcatctc 9706698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 10100105 - 10100217
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgca 108  Q
    |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||  ||||| |||  ||||||||||||||||||||| ||||||    
T  10100105 tattttctaccaacttttctactatatgtgcgacccccactctctctaatggtgtcatttctaatcatatattgtctagtcttaccactcatctaacgca 10100204  T
Q  109 acatcctcatctc 121  Q
    |||||||||||||    
T  10100205 acatcctcatctc 10100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 30031293 - 30031178
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactc--tctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||    
T  30031293 ctattttctaccaacttttctactataggtgctacccccactccctctctaatggtgacatttctaatcctatcccgtctagtcttaccactcatccaac 30031194  T
Q  106 gcaacatcctcatctc 121  Q
     ||||| |||||||||    
T  30031193 acaacaacctcatctc 30031178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 5631858 - 5631741
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctct------aatggtgtcattcataatcctatcctgtctagtcttaccactcatcc 102  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||      ||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  5631858 tattttctaccaacttttctactataggtgttacccccactctctctctctctaatggtgtcattcctaatcatatccggtctagtcttaccactcatcc 5631759  T
Q  103 aacgcaacatcctcatct 120  Q
    ||| ||||||||||||||    
T  5631758 aacacaacatcctcatct 5631741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 9593999 - 9594072
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9593999 ctctctctaatggtgtcattcctaatcctatcccgtctagtcttaccactcatccaacgcaacatcctcatctc 9594072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 35043686 - 35043801
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctc--tctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||| ||||||||||||||| ||||  |||||| |||||||  ||||||||||||||||||||||||||| |||||| |||||||| ||||||| |    
T  35043686 ctattttcaaccaacttttctactttaggtactaccctcactctccctctaatggtgtcattcataatcctatcatgtctaatcttaccaatcatccagc 35043785  T
Q  106 gcaacatcctcatctc 121  Q
    |||||||| |||||||    
T  35043786 gcaacatcttcatctc 35043801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 6056032 - 6056123
Alignment:
Q  23 ttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcc 114  Q
    |||||||||||||| | |||||| |||||||||||||||||||||| |||||  ||||| ||||||||||||||||||||||||||||||||    
T  6056032 ttttctactataggtgttaccccaactctctctaatggtgtcattcttaatcacatcctttctagtcttaccactcatccaacgcaacatcc 6056123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 5080888 - 5080777
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactc--tctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||||||||||||||||||| | |||||||||||  |||||||||||||||||| ||||| |||  |||||| |||||||| | ||||| |||||    
T  5080888 tttctaccaacttttctactataggtgatacccccactcgttctctaatggtgtcattcctaatcttattatgtctaatcttaccagttatccagcgcaa 5080789  T
Q  110 catcctcatctc 121  Q
    ||||||||||||    
T  5080788 catcctcatctc 5080777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 21352082 - 21352171
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccact 97  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||||| | ||| |||| |||||||||| | |||||||||||||||    
T  21352082 ctattttctaccaatttttctactataggtgctacctccactctctctaacgatgttattcctaatcctatcatatctagtcttaccact 21352171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 12890621 - 12890559
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattc 68  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  12890621 ctattttctaccaacttttctactataggtgctacccccactctctccctaatggtgtcattc 12890559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 28027071 - 28027189
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca-ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||||||||  |||||||||||||| ||||||||   |||| ||||| |  ||||||| ||||||||| |  |||||||||||||||||||||||     
T  28027071 ctattttctaccacattttctactataggtgctaccccattctctatctaacgacgtcattcctaatcctatgccatctagtcttaccactcatccaaca 28027170  T
Q  107 caacatcctcatctctgct 125  Q
     ||||||||| ||||||||    
T  28027171 taacatcctcgtctctgct 28027189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 33084091 - 33083976
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||| ||||||||| ||||| |||||||| |||||||||  |||   ||||||  |||| ||||||  |||||||||||||| |||||||||||     
T  33084091 tttctaccatcttttctaccataggtgctaccccaactctctctctaatatcgtcatttctaattctatcccatctagtcttaccacacatccaacgcag 33083992  T
Q  110 catcctcatctctgct 125  Q
    ||||||||| ||||||    
T  33083991 catcctcatttctgct 33083976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 9568651 - 9568588
Alignment:
Q  52 ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcct 115  Q
    |||||||| ||||||| ||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  9568651 ctctaatgttgtcatttataattctatcatgtctagtcttaccacacatccaacgcaacatcct 9568588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 33998291 - 33998368
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||  ||||||  ||||||||||   |||||||||||||| |||||||||||||||| |||||||||||    
T  33998291 ctctctctaatgtagtcatttctaatcctatcacatctagtcttaccacacatccaacgcaacatcttcatctctgct 33998368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 2689642 - 2689578
Alignment:
Q  57 atggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||| |||||||||||| | |||||||||  |||||||| | |||||||||||||||    
T  2689642 atggtgtcattcctaatcctatcctatttagtcttactgctcatccatcacaacatcctcatctc 2689578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 5095910 - 5095816
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccc--cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcat 100  Q
    ||||||||||||| || |||||||||||| | || |||  ||||| ||||||||  ||||||| |||||||||||  || |||||||||||||||    
T  5095910 ctattttctaccatctattctactataggtgatatcccaacactccctctaatgtagtcattcctaatcctatcccttccagtcttaccactcat 5095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 33496178 - 33496106
Alignment:
Q  49 tctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||| |||||||||||||  ||||| |||||| | || |||||||| |||||||| |||||||| |||||||    
T  33496178 tctctgtaatggtgtcatttctaatcttatcctatttaatcttaccattcatccaatgcaacatcatcatctc 33496106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 6641658 - 6641764
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactc--tctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||| ||||||||||||||| | |||||| ||||  ||||||||  |||||||   |||| |||||  ||||||||||| |  |||| |||||||    
T  6641658 tttctaccatcttttctactataggtgataccccaactctatctctaatattgtcatttccaatcttatcccatctagtcttacaaaacatcgaacgcaa 6641757  T
Q  110 catcctc 116  Q
    |||||||    
T  6641758 catcctc 6641764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 7150604 - 7150682
Alignment:
Q  47 actctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||| | || |||  |||||||||  ||||||||||||||| ||||||| |||||||   ||||||||||    
T  7150604 actctctctaatgttttcgttccaaatcctatctcgtctagtcttaccacacatccaaagcaacattagcatctctgct 7150682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 14389416 - 14389518
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||| |||| ||||||||| ||||| |||||| | ||||||||||||   ||||||   |||    |||| |||||||||||||| ||||||||||||||    
T  14389416 tttccaccatcttttctacgataggtgctacctcaactctctctaatatggtcatttcaaat----tcctatctagtcttaccacacatccaacgcaaca 14389511  T
Q  112 tcctcat 118  Q
     ||||||    
T  14389512 acctcat 14389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 2065048 - 2065116
Alignment:
Q  53 tctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||||||  |||||||||| | | |||||||||| ||||||||  | | ||||||||||||    
T  2065048 tctaatggtgtcattactaatcctatcatatgtagtcttaccgctcatccagggtagcatcctcatctc 2065116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 4948627 - 4948667
Alignment:
Q  81 tgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  4948627 tgtctagtcttaccacacatccaaagcaacatcctaatctc 4948667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 4955598 - 4955638
Alignment:
Q  81 tgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  4955598 tgtctagtcttaccacacatccaaagcaacatcctaatctc 4955638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 6293698 - 6293733
Alignment:
Q  90 ttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||| |||||||| |||||||||||||||||||    
T  6293698 ttaccacacatccaacacaacatcctcatctctgct 6293733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 4e-48; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 52138837 - 52138718
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  52138837 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 52138738  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  52138737 gcaacatcctcatctctgct 52138718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 51447955 - 51448073
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccc-cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    ||||||||||||||||||||||||||||| |||||||  | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  51447955 ctattttctaccaacttttctactataggtgctaccctactctctctctaatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacg 51448054  T
Q  107 caacatcctcatctctgct 125  Q
    |||||||||||||||||||    
T  51448055 caacatcctcatctctgct 51448073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 28245474 - 28245355
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||| ||||||||||| | ||||||||||||||||||||||    
T  28245474 ctattttctaccaacttttctactataggtgctacccccactctctctctaatgatgtcattcctaatcctatccaggctagtcttaccactcatccaac 28245375  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||| ||||    
T  28245374 gcaacatcctcatctttgct 28245355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 54128415 - 54128296
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccc--cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||    
T  54128415 ctattttctaccatcttttctactataggtgctaccccaacactctctctaatggtgtcattcataatcctatcgcgtctagttttaccactcatcaaac 54128316  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  54128315 gcaacatcctcatctctgct 54128296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 54279057 - 54278938
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||| |||| ||||| ||||||||||||||||| |||||||    
T  54279057 ctattttctaccaacttttctactataggtgctacccctactctctctctaatggtgtcattcctaattctatcttgtctagtcttaccacttatccaac 54278958  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  54278957 gcaacatcctcatctctgct 54278938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 25191414 - 25191297
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||| |||| |||||||||||||| |||||||||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||| |||    
T  25191414 ctattttcttccaatttttctactataggtgctacccccattctctctaatgatgtcattcttaatcatatcatgtctagtcttaccactcatccagcgc 25191315  T
Q  108 aacatcctcatctctgct 125  Q
    ||||||||||||||||||    
T  25191314 aacatcctcatctctgct 25191297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 22106 - 21995
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||    
T  22106 tttctaccaacttttctactataggtgctacccccactctctctctaatggtgacattcctaatcctatcatgtctagtcttaccactcatccagcgcaa 22007  T
Q  110 catcctcatctc 121  Q
    ||||||||||||    
T  22006 catcctcatctc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 33272267 - 33272392
Alignment:
Q  8 ctattttctaccaacttttctactata----ggagctacccccactct----ctctaatggtgtcattcataatcctatcctgtctagtcttaccactca 99  Q
    |||||||||||||||||||||||||||    || ||||||||||||||    ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  33272267 ctattttctaccaacttttctactatatataggtgctacccccactctctctctctaatggtgtcattcttaatcctatcatgtctagtcttaccactca 33272366  T
Q  100 tccaacgcaacatcctcatctctgct 125  Q
    ||||| ||||||||||||||||||||    
T  33272367 tccaatgcaacatcctcatctctgct 33272392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 47233841 - 47233955
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca--ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||||  ||||| |||| |||||||||||||||||||||||||    
T  47233841 ctattttctaccaacttttctactataggtgctacctccattctctctctaatggtgtcatttctaatcttatcatgtctagtcttaccactcatccaac 47233940  T
Q  106 gcaacatcctcatct 120  Q
    |||| ||||||||||    
T  47233941 gcaatatcctcatct 47233955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 53519629 - 53519511
Alignment:
Q  8 ctattttctaccaacttttctactata------ggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactca 99  Q
    |||||||||||||||||||||||||||      || ||||||||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  53519629 ctattttctaccaacttttctactatatatataggtgctacccccactctctgtctaatggtgtcattcttaatcctatcctgtctagtattaccactca 53519530  T
Q  100 tccaacgcaacatcctcat 118  Q
    |||||||||||||||||||    
T  53519529 tccaacgcaacatcctcat 53519511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 5168868 - 5168750
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctct------aatggtgtcattcataatcctatcctgtctagtcttaccactcatcc 102  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||      ||||||||||||| |||||||||||||||||||||||||  ||||||    
T  5168868 tattttctaccaacttttctaccataggtgctacccccactctctctctctctaatggtgtcattcctaatcctatcctgtctagtcttacctatcatcc 5168769  T
Q  103 aacgcaacatcctcatctc 121  Q
    | |||||||||||||||||    
T  5168768 agcgcaacatcctcatctc 5168750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 26490352 - 26490239
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||| ||||||||||||||| |||||| | ||||| |||||||  ||||||  ||||| ||||| |||| |||||||||||||||||||||    
T  26490352 ctattttctaccatcttttctactataggtgctacctcaactctgtctaatgacgtcattgctaatcatatcccgtcttgtcttaccactcatccaacgc 26490253  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  26490252 aacatcctcatctc 26490239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 27917607 - 27917490
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||| |||||| ||||||||||||||| |||||||| ||| |||||||||| ||||||| |||||  |||  |||||| ||||||||||||||||| |    
T  27917607 ctatttcctaccatcttttctactataggtgctaccccaactttctctaatggggtcattcctaatcaaatctcgtctaggcttaccactcatccaacac 27917508  T
Q  108 aacatcctcatctctgct 125  Q
    ||||||||||||||||||    
T  27917507 aacatcctcatctctgct 27917490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 45728180 - 45728064
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct---aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgca 108  Q
    ||||||||||||||||||||||| | ||||||||||||||||||   |||| |||||||  |||||||||   |||| ||||||||||||||||| ||||    
T  45728180 tttctaccaacttttctactatatgtgctacccccactctctctctaaatgatgtcatttctaatcctatttcgtctcgtcttaccactcatccagcgca 45728081  T
Q  109 acatcctcatctctgct 125  Q
    |||||||||||||||||    
T  45728080 acatcctcatctctgct 45728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 48734380 - 48734481
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||| || |||||||||| | |||||||| || ||||||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||    
T  48734380 ctattttctaccatctgttctactatacgcgctaccccaacactctctaatggtgtcattcataatcttatcccgcctagttttaccactcatccaacgc 48734479  T
Q  108 aa 109  Q
    ||    
T  48734480 aa 48734481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 19737034 - 19736918
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca---ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    ||||||||||||| ||||||||||||||| ||| ||||||   |||||||||||| | ||| |  ||||| ||||| |||||||||||||||||||||||    
T  19737034 ctattttctaccatcttttctactataggtgctgcccccaactctctctctaatgatttcacttctaatcgtatcccgtctagtcttaccactcatccaa 19736935  T
Q  105 cgcaacatcctcatctc 121  Q
    | ||||||| |||||||    
T  19736934 cacaacatcatcatctc 19736918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 49503799 - 49503897
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacc--cccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    ||||||||||||| ||||||||||||||| ||||||    | |||||||||||||||||||||  |||||||||  |||||||||||||||||||||||    
T  49503799 ctattttctaccatcttttctactataggtgctacctgaactctctctctaatggtgtcattcccaatcctatctcgtctagtcttaccactcatccaa 49503897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 43695012 - 43695127
Alignment:
Q  10 attttctaccaacttttctactataggagcta-cccccactctctctaatggtgtcattcataatccta-----tcctgtctagtcttaccactcatcca 103  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||     |||||||| ||||||||     || ||||| ||||||||| |||||||    
T  43695012 attttctaccaacttttctactataggtgctaccccccactctctct----ctgtcattcctaatcctatcatgtcatgtctggtcttaccattcatcca 43695107  T
Q  104 acgcaacatcctcatctctg 123  Q
    ||||||||||||||||||||    
T  43695108 acgcaacatcctcatctctg 43695127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 36820210 - 36820323
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||| |||| |||| ||| |||||| |||||||| |||||||||||||  ||||||  ||||||||||  ||||||||||||||| ||||||||||||||    
T  36820210 tttccaccatctttgctaatataggtgctaccccaactctctctaatgtcgtcatttctaatcctatctcgtctagtcttaccacacatccaacgcaaca 36820309  T
Q  112 tcctcatctctgct 125  Q
     ||| |||| ||||    
T  36820310 accttatctttgct 36820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 38850089 - 38850012
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||| ||| |||||||| ||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  38850089 ctctctctcatgatgtcattcctaatcatatcatgtctagtcttactactcatccagcgcaacatcctcatctctgct 38850012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 45236850 - 45236778
Alignment:
Q  49 tctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||||||||||  ||||| ||||| ||||||||||||||| |||||||||||||||||| |||||    
T  45236850 tctctctaatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 45236778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 3186806 - 3186707
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctc--taatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||||||||||| | |||||||| |||||| ||||||| ||  |||||||||||||| ||||| ||||| | | ||||||||| ||||||||||    
T  3186806 ctattttctaccaactttcccactataggtgctaccaccactctttccataatggtgtcattcctaatcttatcccgccaagtcttaccgctcatccaac 3186707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 47542032 - 47542076
Alignment:
Q  81 tgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  47542032 tgtctagtcttaccactcatccaacgcaacatcctcatctctgct 47542076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 35033183 - 35033136
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35033183 ctattttctaccaacttttctactataggtgctacccccactctctct 35033136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 2340961 - 2341074
Alignment:
Q  10 attttctaccaacttttctactataggagctacccc--cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||| |||| ||||||||| |  || ||||||||  ||| |||||||||| | |||||  |||| ||||| |||||||||||||||| ||||||| ||    
T  2340961 attttccaccatcttttctacgaatggtgctaccccaacaccctctctaatgttttcatttctaattctatcatgtctagtcttaccacacatccaatgc 2341060  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  2341061 aacatcctcatctc 2341074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 19676377 - 19676447
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcat 118  Q
    |||||||||||||||||| || ||||| |||||  |||||||||||| ||||||||| |||||||||||||    
T  19676377 ctctctctaatggtgtcactcctaatcttatcccatctagtcttaccgctcatccaatgcaacatcctcat 19676447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 19757937 - 19757829
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccca---ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    ||||||||||||| ||||||||||||||| ||| ||||||   |||||||||||| | ||| |  ||||| ||||  || ||||||||||||||||||||    
T  19757937 ctattttctaccatcttttctactataggtgctgcccccaactctctctctaatgatttcacttctaatcgtatctcgtgtagtcttaccactcatccaa 19757838  T
Q  105 cgcaacatc 113  Q
    | |||||||    
T  19757837 cacaacatc 19757829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 38054614 - 38054696
Alignment:
Q  38 gctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    |||||| | ||||||||||||| | |||||  ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||    
T  38054614 gctacctcaactctctctaatgttatcatttctaatcctatcccgtctagtcttaccacccattcaacgcaacattctcatct 38054696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 38060468 - 38060421
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  38060468 ctattttctaccaacttttctattataggtgctacccccactctctct 38060421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 33307165 - 33307087
Alignment:
Q  24 tttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatcc 102  Q
    ||||||||||||| |||||||| ||||||||||||| |||| ||  ||||| |||| ||| |||||||||||| |||||    
T  33307165 tttctactataggtgctaccccaactctctctaatgttgtcgtttctaatcttatcatgtttagtcttaccacacatcc 33307087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 30345506 - 30345445
Alignment:
Q  60 gtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||||| ||||| |||| | ||||||| |||||||||| |||||||||||||||    
T  30345506 gtgtcattcataattctatcatgtccaatcttaccgctcatccaacacaacatcctcatctc 30345445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 46568111 - 46568034
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||||| |||||||  |||| | |||  ||||||||||| ||| |||||||| |||||||||||||||||||    
T  46568111 ctctctctaatgttgtcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcctcatctctgct 46568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 42510324 - 42510375
Alignment:
Q  74 cctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||  |||||||||||||| ||||||| ||||||||||||||||||||    
T  42510324 cctatcccatctagtcttaccacacatccaatgcaacatcctcatctctgct 42510375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 46431984 - 46432031
Alignment:
Q  74 cctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  46431984 cctatcctgtctagtcttaccacacatccaatgcaacatccccatctc 46432031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 344956 - 345065
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccc--cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||| || ||||||||||||| | ||||||||  | ||||||||||||   |||||  ||||||||||  |||||||||||||||  |||||||    
T  344956 ctattttctaacatcttttctactataagtgctaccccaactctctctctaatgtcatcatttctaatcctatctcgtctagtcttaccacaaatccaac 345055  T
Q  106 gcaacatcct 115  Q
      ||||||||    
T  345056 ataacatcct 345065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 31337775 - 31337884
Alignment:
Q  12 tttctaccaacttttctactataggagctacccc-cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaac 110  Q
    |||| |||| ||||||||||||||| |||||||  |  ||||||||||| |||||||  |||||||||||  |||||||||| ||| |||||||| |||     
T  31337775 tttcaaccatcttttctactataggtgctacccaactttctctctaatgctgtcattt-taatcctatcccatctagtcttatcacacatccaacacaag 31337873  T
Q  111 atcctcatctc 121  Q
    ||||| |||||    
T  31337874 atccttatctc 31337884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 48953694 - 48953756
Alignment:
Q  59 ggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||| ||||||||||   || | ||||||| ||||||||||||||||||||||||||    
T  48953694 ggtgtcattcttaatcctatctcatccaatcttaccgctcatccaacgcaacatcctcatctc 48953756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 54425217 - 54425304
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttacc 94  Q
    ||||||||||| |||||||||| |||||  | |||| | |||||||  ||||||||||||||||||||||||||| | ||| |||||||    
T  54425217 ctattttctacaaacttttctattatagatgatacctc-actctcttcctaatggtgtcattcataatcctatcccgactattcttacc 54425304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 38430885 - 38430799
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctct-------ctaatggtgtcattcataatcctatcctgtctag 87  Q
    ||||||||||||| ||||||||||||||| |||||| | || ||||       ||||||||||||||| ||||||||||| ||||||    
T  38430885 ctattttctaccatcttttctactataggtgctacctcaacgctctaaacgctctaatggtgtcattcctaatcctatcccgtctag 38430799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 39600929 - 39601016
Alignment:
Q  11 ttttctaccaacttttctactataggagctacccc--cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccac 96  Q
    ||||| |||| |||||||||||||||  |||||||  | |||||||||||| |||||||  ||||| |||||  ||||||||||||||    
T  39600929 ttttccaccatcttttctactataggtactaccccaactctctctctaatgttgtcatttctaatcttatcccatctagtcttaccac 39601016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 50960878 - 50960922
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctc 52  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||    
T  50960878 ctattttctaccatcttttctactataggtgctaccccaactctc 50960922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 37227950 - 37227863
Alignment:
Q  23 ttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaac 110  Q
    |||||||| ||||  ||||| || |||||||||||||  ||||||  |||||||||  |||||||||||||||| || ||||| ||||    
T  37227950 ttttctacgatagctgctactccaactctctctaatgtggtcatttctaatcctatattgtctagtcttaccacacaaccaacacaac 37227863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 49841606 - 49841529
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||| |||||| |||||||  ||||| || |  |||||||||||| || |||||||| |||||||||||||| ||||    
T  49841606 ctctcactaatgttgtcatttctaatcttacctcgtctagtcttactacacatccaacacaacatcctcatctatgct 49841529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 31454475 - 31454531
Alignment:
Q  12 tttctaccaacttttctactataggagct-acccccactctctctaatggtgtcatt 67  Q
    ||||||||| ||||||||||||||| ||| |||  |||||||||||||| |||||||    
T  31454475 tttctaccatcttttctactataggtgctaaccaacactctctctaatgttgtcatt 31454531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 3987080 - 3987037
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||| ||||||||||||||| | |||||| |||||||||    
T  3987080 tttctaccatcttttctactataggtgataccccaactctctct 3987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 38850157 - 38850110
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||||||||||||||||||||| | ||||| | | ||||||||    
T  38850157 ctattttctaccaacttttctactatatgtgctactctctctctctct 38850110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 36
Target Start/End: Original strand, 48953668 - 48953695
Alignment:
Q  9 tattttctaccaacttttctactatagg 36  Q
    ||||||||||||||||||||||||||||    
T  48953668 tattttctaccaacttttctactatagg 48953695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 54365236 - 54365271
Alignment:
Q  23 ttttctactataggagctacccccactctctctaat 58  Q
    |||||||||||||| |||||||| ||||||||||||    
T  54365236 ttttctactataggtgctaccccaactctctctaat 54365271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 93; Significance: 1e-45; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 31505 - 31386
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  31505 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaac 31406  T
Q  106 gcaacatcctcatctctgct 125  Q
    |||||||||| |||||||||    
T  31405 gcaacatcctaatctctgct 31386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 44193 - 44231
Alignment:
Q  83 tctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  44193 tctagtcttaccgcacatccaacgcaacatcctcatctc 44231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 1e-45; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 24178547 - 24178428
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  24178547 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcttaatcctatcatgtatagtcttaccactcatccaac 24178448  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  24178447 gcaacatcctcatctctgct 24178428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 1275301 - 1275183
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccc-cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    ||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  1275301 ctattttctaccaacttttctactataggtgctaccccactctctctctaatggtgtcattcctaatcctaccatgtctagtcttaccactcatccaacg 1275202  T
Q  107 caacatcctcatctctgct 125  Q
    |||||||||||||||||||    
T  1275201 caacatcctcatctctgct 1275183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 28977104 - 28977221
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| | |||||| |||||||||||||||| |    
T  28977104 ctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcattcctaatcctatcatttctagttttaccactcatccaacac 28977203  T
Q  108 aacatcctcatctctgct 125  Q
    ||||| ||||||||||||    
T  28977204 aacatactcatctctgct 28977221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 12492629 - 12492751
Alignment:
Q  8 ctattttctaccaacttttctactataggag---ctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatcc 102  Q
    |||||||||||||||||||||||||||| ||   |||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  12492629 ctattttctaccaacttttctactatagtaggtgctacccccactctctctctaatggtgtcattcctaatcttatcctgtctagtcttaccactcatcc 12492728  T
Q  103 aacgcaacatcctcatctctgct 125  Q
    |||| ||||||||||||||||||    
T  12492729 aacgtaacatcctcatctctgct 12492751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 2075719 - 2075838
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||| |||||||||||||||||| |||| | ||||||||||||  |||||||| |||||||| |||||||||| ||||||||||||| |||||||||||    
T  2075719 ctattgtctaccaacttttctactgtaggtgttacccccactctctctctaatgttgtcattcctaatcctatcttgtctagtcttacaactcatccaac 2075818  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  2075819 gcaacatcctcatctctgct 2075838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 4496421 - 4496308
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcc--tgtctagtcttaccactcatcca 103  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||  |||||| |||||||||| |||||||||||  |||||||||||||||||||||||    
T  4496421 ctattttctaccagcttttctactataggtgctacccccactctctctctaaaggtgtcattcctaatcctatcctgtgtctagtcttaccactcatcca 4496322  T
Q  104 acgcaacatcctca 117  Q
    ||||||||||||||    
T  4496321 acgcaacatcctca 4496308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 10639341 - 10639215
Alignment:
Q  8 ctattttctaccaacttttctactatag-------gagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactc 98  Q
    ||||||||||||||||||||||||||||       | |||| |||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||    
T  10639341 ctattttctaccaacttttctactatagtctataggtgctagccccactctctctctaatggtgtcattcctaatcctattctgtctagtcttaccactc 10639242  T
Q  99 atccaacgcaacatcctcatctctgct 125  Q
    |||||||||||||||||||||||||||    
T  10639241 atccaacgcaacatcctcatctctgct 10639215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 1287824 - 1287953
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct------------ctctaatggtgtcattcataatcctatcctgtctagtcttacca 95  Q
    ||||||||||||||||||||||||||||| ||||||||||||||            |||||||| |||||||| |||||||||| |||||||||||||||    
T  1287824 ctattttctaccaacttttctactataggtgctacccccactctctctctctctctctctaatgatgtcattcctaatcctatcatgtctagtcttacca 1287923  T
Q  96 ctcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||||||||||||    
T  1287924 ctcatccaacgcaacatcctcatctctgct 1287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 3301881 - 3301766
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||| ||||| |||||||||| ||||||||||||||||||||| | |    
T  3301881 ctattttctaccaacttttctactataggggctaccctcactctctctctaatggtgacattcctaatcctatcatgtctagtcttaccactcatcaagc 3301782  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||| ||||||    
T  3301781 gcaacatccccatctc 3301766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 16347623 - 16347738
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||| |||||  ||||| |||  |||||||||||||||||||||||||    
T  16347623 ctattttctaccaacttttctactataggtgctacccccgctctctctctaatggtttcatttttaatcatatattgtctagtcttaccactcatccaac 16347722  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  16347723 gcaacatcctcatctc 16347738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 26884933 - 26885040
Alignment:
Q  8 ctattttctaccaacttttc-tactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    |||||||||||||||||||| | ||||||| ||||||| ||||||||  |||||||||| |||| ||||||||||| ||||||| |||||||||||||||    
T  26884933 ctattttctaccaacttttcctgctataggtgctaccctcactctctttctaatggtgttattcctaatcctatcccgtctagttttaccactcatccaa 26885032  T
Q  105 cgcaacat 112  Q
    ||||||||    
T  26885033 cgcaacat 26885040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 20318989 - 20318905
Alignment:
Q  38 gctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||     ||||||||||||||||||||||||||||||||||||||||    
T  20318989 gctacccccactctttctctaatggtgtcattcctaatcctatcc-----agtcttaccactcatccaacgcaacatcctcatctctgct 20318905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 11002672 - 11002785
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||||||||  ||||||||| |||| |||||||  ||||||||||||| |||||||  |||| ||||||  ||| |||||||||| |||||| |||||||    
T  11002672 tttctaccatgttttctactgtaggtgctacccgaactctctctaatgttgtcatttctaattctatcccatctcgtcttaccacacatccagcgcaaca 11002771  T
Q  112 tcctcatctctgct 125  Q
    ||||||||||||||    
T  11002772 tcctcatctctgct 11002785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 32516593 - 32516480
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||| |||| ||||||||||||| | | ||| || ||||||||||||| |||||||  |||  |||||||||||||||||||||| |||||||| |    
T  32516593 ctattttccaccatcttttctactataagtgttactccaactctctctaatgttgtcatttctaagtctatcctgtctagtcttaccacacatccaacac 32516494  T
Q  108 aacatcctcatctc 121  Q
    |||||| |||||||    
T  32516493 aacatcatcatctc 32516480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 38685004 - 38684932
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctat 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||    
T  38685004 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctat 38684932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 31636169 - 31636253
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccac 96  Q
    ||||||||| ||||||||||||||| |||||||| ||| ||||||||| ||||||| ||||| |||||| |||||||||||||||    
T  31636169 tttctaccatcttttctactataggtgctaccccaactttctctaatgctgtcatttataattctatccagtctagtcttaccac 31636253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 34273064 - 34272940
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct------------aatggtgtcattcataatcctatcctgtctagtcttacca 95  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||            ||||||||||||| ||     |||||||||||||||||||    
T  34273064 ctattttctaccaacttttctattataggtgctacccccactctctctctctctctctctaatggtgtcattccta-----atcctgtctagtcttacca 34272970  T
Q  96 ctcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||| ||||||||||||||||||||    
T  34272969 ctcatccaatgcaacatcctcatctctgct 34272940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 15168829 - 15168721
Alignment:
Q  8 ctattttctaccaacttttctactataggagctaccccc--actctctctaatggtgtcattcataatcctatcctgtctagtct--taccactcatcca 103  Q
    ||||||||||||| ||||||||||||||| |||||||||  |||| ||||||||||||||||| ||||||||||  ||||| |||  | ||||||||| |    
T  15168829 ctattttctaccatcttttctactataggtgctaccccccaactccctctaatggtgtcattcttaatcctatctcgtctaatcttgtgccactcatcta 15168730  T
Q  104 acgcaacat 112  Q
    |||||||||    
T  15168729 acgcaacat 15168721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 27930 - 27816
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||| | || ||||||||||||||| |||||||  ||||| | |  ||||||||||||||||||| |||| ||| |||| |||||||||||| ||     
T  27930 ctattttccatcatcttttctactataggtgctaccctaactctttttcaaatggtgtcattcataatcatatcttgt-tagttttaccactcatctaat 27832  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  27831 gcaacatcctcatctc 27816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 36215534 - 36215418
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    ||||| |||||||||||||||||||||  |||||| |||||||||  ||||||  ||||||||||||| |||| | |||||| ||||  |||||| | ||    
T  36215534 tatttcctaccaacttttctactatagatgctacctccactctctccctaatg--gtcattcataatcatatcatatctagttttactgctcatctagcg 36215437  T
Q  107 caacatcctcatctctgct 125  Q
    |||||| ||||||||||||    
T  36215436 caacatactcatctctgct 36215418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 9235062 - 9234987
Alignment:
Q  50 ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||| ||||||| |||||||   ||||||||||    
T  9235062 ctctctaatgttgtcatttataatcctatcccgtctagtcttaccacacatccaatgcaacatttccatctctgct 9234987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 14665751 - 14665658
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct------ctctaatggtgtcattcataatcctatcctgtctagtcttacca 95  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||      ||||||||||||||||  |||||||||| ||||||| |||||||    
T  14665751 ctattttctatcaacttctctactataggtgctacccccactctctctctctctaatggtgtcatttctaatcctatcatgtctaggcttacca 14665658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 28186956 - 28187030
Alignment:
Q  49 tctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctg 123  Q
    ||||||||||| |||||||  |||||||| | |||||||||||||||| ||||||| ||||||| ||||||||||    
T  28186956 tctctctaatgttgtcatttctaatcctaccatgtctagtcttaccacacatccaatgcaacattctcatctctg 28187030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 36200764 - 36200702
Alignment:
Q  61 tgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctg 123  Q
    |||||||| ||||| |||||| | |||||||||| ||||||||||||||||||||||||||||    
T  36200764 tgtcattcctaatcttatcctatttagtcttaccgctcatccaacgcaacatcctcatctctg 36200702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 7678471 - 7678402
Alignment:
Q  52 ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    |||||||| |||||||  |||||||||||| ||||||||| ||||  |||||||||||||||||||||||    
T  7678471 ctctaatgttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaacatcctcatctc 7678402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 219702 - 219817
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    |||| |||| |||||| || ||||| |||||||| |||||||||  |||| |||||||| ||||| ||||  |||| |||||| ||| ||||||||||||    
T  219702 tttccaccaccttttcaacgataggtgctaccccaactctctctccaatgttgtcattcgtaatcttatctcgtcttgtcttaacacgcatccaacgcaa 219801  T
Q  110 catcctcatctctgct 125  Q
    ||| ||||||| ||||    
T  219802 cattctcatctttgct 219817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 10082988 - 10083102
Alignment:
Q  12 tttctaccaacttttctactataggagctaccccca--ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    ||||||||| ||||||||||||||| | |||||| |  ||||| |||||| | |||||  |||| |||||| ||||||||||||||| ||| ||| ||||    
T  10082988 tttctaccatcttttctactataggtgataccccaatgctctccctaatgttctcatttctaattctatcccgtctagtcttaccacacat-caaagcaa 10083086  T
Q  110 catcctcatctctgct 125  Q
    |||||||||| |||||    
T  10083087 catcctcatccctgct 10083102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 418236 - 418318
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttacc 94  Q
    ||||| ||| ||||||||| ||||| |||||||| ||||||||||||| |||||||  |||| ||||| ||||| ||||||||    
T  418236 tttctgccatcttttctaccataggtgctaccccaactctctctaatgttgtcatttctaattctatcatgtctcgtcttacc 418318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 5305611 - 5305545
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcc 114  Q
    |||||||||||| ||| |||  |||| ||||| |||||||||||||||| |||||||||||||||||    
T  5305611 ctctctctaatgttgttatttctaattctatcttgtctagtcttaccacacatccaacgcaacatcc 5305545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 17340724 - 17340798
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctct 122  Q
    ||||||||||||||||||||| |||||  ||    |||||| |||||||||||||||||||||||||| ||||||    
T  17340724 ctctctctaatggtgtcattcctaatcacatttcttctagttttaccactcatccaacgcaacatccttatctct 17340798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 27998385 - 27998343
Alignment:
Q  81 tgtctagtcttaccactcatccaacgcaacatcctcatctctg 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  27998385 tgtctagtcttaccacacatccaacgcaacatcctcatctctg 27998343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 21952346 - 21952274
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    |||||| ||||| |||||||  ||||| ||||  ||||||||||||||| ||| |||||||||||||||||||    
T  21952346 ctctctttaatgctgtcatttctaatcttatctcgtctagtcttaccacacatgcaacgcaacatcctcatct 21952274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 34040032 - 34039960
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    |||||||||||||||| |||  |||||||||| | |||||| ||| || ||||||||||| ||||||||||||    
T  34040032 ctctctctaatggtgtaatttttaatcctatcatatctagttttatcattcatccaacgcgacatcctcatct 34039960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 34194782 - 34194850
Alignment:
Q  47 actctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcct 115  Q
    ||||||||||||| |  ||||  ||||||||||||||||||| ||||||| |||||||| |||||||||    
T  34194782 actctctctaatgtttacatttctaatcctatcctgtctagttttaccacacatccaacacaacatcct 34194850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 33667249 - 33667166
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttacca 95  Q
    ||||||||| ||||||||||||||| |||||||| ||||||  ||||| |||||||  |||| || | ||||||| ||||||||    
T  33667249 tttctaccatcttttctactataggtgctaccccaactctcgttaatgttgtcatttctaattctctactgtctactcttacca 33667166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 119
Target Start/End: Original strand, 43558135 - 43558172
Alignment:
Q  82 gtctagtcttaccactcatccaacgcaacatcctcatc 119  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  43558135 gtctagtcttaccacacatccaacgcaacatcctcatc 43558172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 1174633 - 1174549
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccac 96  Q
    ||||||||| |||||||||||| |  | |||||| ||||||||| ||| ||||||| |||||| |||||  |||| |||||||||    
T  1174633 tttctaccatcttttctactatggctgttaccccaactctctctgatgctgtcatttataatcatatcccatctaatcttaccac 1174549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 5848401 - 5848440
Alignment:
Q  86 agtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  5848401 agtcttaccacacatccaatgcaacatcctcatctctgct 5848440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 14667800 - 14667753
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    |||||||| |||| ||||||||||||||| |||||||| |||||||||    
T  14667800 ctattttccaccatcttttctactataggtgctaccccaactctctct 14667753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 20456810 - 20456776
Alignment:
Q  8 ctattttctaccaacttttctactataggagctac 42  Q
    ||||||||||||||||||||||||||||| |||||    
T  20456810 ctattttctaccaacttttctactataggtgctac 20456776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 15489786 - 15489834
Alignment:
Q  70 taatcctatcctgtctagtcttaccactcatccaacgcaacatcctcat 118  Q
    ||||| |||| |||||||||||||||| |||| |||||| |||||||||    
T  15489786 taatcttatcatgtctagtcttaccacacatctaacgcagcatcctcat 15489834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 11729071 - 11729008
Alignment:
Q  63 tcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca-tcctcatctctgct 125  Q
    ||||| ||||| ||||| |||||||||||| ||  |||| ||||||||| ||||||||||||||    
T  11729071 tcatttataattctatcatgtctagtcttatcatacatctaacgcaacattcctcatctctgct 11729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 14749340 - 14749297
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct 55  Q
    |||||||||| |||||||||||||| ||||| || |||||||||    
T  14749340 tttctaccaatttttctactataggtgctacaccaactctctct 14749297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 118
Target Start/End: Complemental strand, 21093736 - 21093701
Alignment:
Q  83 tctagtcttaccactcatccaacgcaacatcctcat 118  Q
    |||||||||||||| ||| |||||||||||||||||    
T  21093736 tctagtcttaccacacatacaacgcaacatcctcat 21093701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 4e-45; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 8180816 - 8180698
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||     
T  8180816 tattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaaca 8180717  T
Q  107 caacatcctcatctctgct 125  Q
    |||||||||||||||||||    
T  8180716 caacatcctcatctctgct 8180698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 3866109 - 3865990
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  3866109 ctattttctaccaacttttttactataggtgctacccccactctctctccaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 3866010  T
Q  106 gcaacatcctcatctctgct 125  Q
    |||||||| |||||||||||    
T  3866009 gcaacatcatcatctctgct 3865990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 38429921 - 38429806
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  38429921 ctattttctaccaacttttctactataggtgctgcccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 38429822  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  38429821 gcaacatcctcatctc 38429806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 36183487 - 36183369
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||  ||| ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  36183487 tattttctaccaacttttctactataggtgctacccctactctctctctaattgtgtcattcctaatcctatcatgtctagtcttaccactcatccaacg 36183388  T
Q  107 caacatcctcatctctgct 125  Q
    |||||||||||||||||||    
T  36183387 caacatcctcatctctgct 36183369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 3243898 - 3244015
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  3243898 ctattttccatcaacttttttactataggtgctacccccactctctctaatggtgtcattcataatcctatcatgtgtagtcttactactcatccaacgc 3243997  T
Q  108 aacatcctcatctctgct 125  Q
    |||||||| |||||||||    
T  3243998 aacatccttatctctgct 3244015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 12734736 - 12734623
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| | |    
T  12734736 ctattttctaccaatttttctactataggtgctacccccactctctctaatggtgtcatttctaatcctatcccgtctagtcttaccactcatccagcac 12734637  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  12734636 aacatcctcatctc 12734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 11992354 - 11992466
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgca 108  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||| ||||    
T  11992354 tattttctaccaacttttctactataggtgctaccctcactctctctaatggtgtcattcctaatcttatcatgtctagtattaccactcatccagcgca 11992453  T
Q  109 acatcctcatctc 121  Q
    |||||||||||||    
T  11992454 acatcctcatctc 11992466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 41763287 - 41763401
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccc-cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacg 106  Q
    ||||||||||||||||||||||||||||| | |||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||    
T  41763287 ctattttctaccaacttttctactataggtgttaccccactctctctctaatggtgtcattcctaatcctatcttgtctagtcttaccactcatccatcg 41763386  T
Q  107 caacatcctcatctc 121  Q
    |||||||||||||||    
T  41763387 caacatcctcatctc 41763401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 45367871 - 45367984
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccc-cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| |||    
T  45367871 tattttctaccaacttttctactataggtgctaccccccactctctctaatggtgtcattcttaatcctatcttgtctagtcttaccattcatccagcgc 45367970  T
Q  108 aacatcctcatctc 121  Q
    |||||| |||||||    
T  45367971 aacatcatcatctc 45367984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 4807629 - 4807510
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctct------aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||      |||| ||||||||||||||||||| |||||| |||||||| |||||||||    
T  4807629 tttctaccaacttttctactataggtgctacccccactctctctctctctaatgatgtcattcataatcctatcatgtctattcttaccattcatccaac 4807530  T
Q  106 gcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||    
T  4807529 gcaacatcctcatctctgct 4807510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 38452930 - 38453053
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct------ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatc 101  Q
    ||||||||||||||||||||||||||||  ||||||||||||||      ||||||||||||||||| |||||||||  |||||||||||||||||||||    
T  38452930 ctattttctaccaacttttctactatagatgctacccccactctctctctctctaatggtgtcattcctaatcctatgatgtctagtcttaccactcatc 38453029  T
Q  102 caacgcaacatcctcatctctgct 125  Q
    ||||||||||||||||| ||||||    
T  38453030 caacgcaacatcctcatgtctgct 38453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 41197473 - 41197588
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||| | |    
T  41197473 ctattttctaccaacttttctattataggtgctaccctcactctatctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatctagc 41197572  T
Q  106 gcaacatcctcatctc 121  Q
    ||||||||||||||||    
T  41197573 gcaacatcctcatctc 41197588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 18424622 - 18424728
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||| ||||| |||| | |||||||||||||||||||| |||     
T  18424622 ctattttctaccaacttttctactatagatgctacacccactctctctaatggtatcattcttaatcatatcatatctagtcttaccactcatccgacgt 18424721  T
Q  108 aacatcc 114  Q
    |||||||    
T  18424722 aacatcc 18424728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 2610523 - 2610446
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2610523 ctctctctaatggtgtcattcctaatcctgtcctgtctagtcttaccactcatccaacgcagcatcctcatctctgct 2610446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 19337096 - 19337209
Alignment:
Q  9 tattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtct-agtcttaccactcatccaacgc 107  Q
    ||||||| |||| |||| |||||||||| |||||||| ||||||||||||| | ||||| |||||||||||||| || ||||||||||| |||||||||     
T  19337096 tattttccaccatctttactactataggtgctaccccaactctctctaatgttctcatttataatcctatcctgcctaagtcttaccacacatccaacgt 19337195  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  19337196 aacatcctcatctc 19337209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 23997651 - 23997539
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    |||||||||||||| |||||||   |||| ||||| ||||||||  ||||||||||||||||| |||||| ||| ||||||||||||||||||||||| |    
T  23997651 ctattttctaccaaattttcta---taggtgctacacccactctatctctaatggtgtcattcctaatccgatcatgtctagtcttaccactcatccagc 23997555  T
Q  106 gcaacatcctcatctc 121  Q
    |||||||| |||||||    
T  23997554 gcaacatcttcatctc 23997539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 16097231 - 16097350
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactc------tctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatc 101  Q
    |||||||||||||||||||||| |||||| |||||||||||||      ||||||| |||||||||  ||||| |||||  |||||||||||||||||||    
T  16097231 ctattttctaccaacttttctattataggtgctacccccactctaactctctctaacggtgtcatttctaatcatatcccatctagtcttaccactcatc 16097330  T
Q  102 caacgcaacatcctcatctc 121  Q
    ||  ||||||||||||||||    
T  16097331 cagtgcaacatcctcatctc 16097350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 42092550 - 42092437
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    ||||||||| |||||||| |||||| |||||||| |||||||||||   |||||||  ||||| ||||| |||||||||||| || ||||||| ||||||    
T  42092550 tttctaccatcttttctagtataggcgctaccccaactctctctaacattgtcatttctaatcatatcccgtctagtcttactacacatccaatgcaaca 42092451  T
Q  112 tcctcatctctgct 125  Q
    || |||||||||||    
T  42092450 tcatcatctctgct 42092437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 7825353 - 7825276
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||||||| ||||||||  ||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  7825353 ctctctctaatagtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgct 7825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 4598811 - 4598928
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactct----ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||| |||| |||||||||| |||||||| |||||    ||||||||  ||||||   ||| |||||| ||||||||||||||| ||||||||||    
T  4598811 tttctaccatctttactactataggtgctaccccaactctctctctctaatgtcgtcattttgaattctatcccgtctagtcttaccacacatccaacgc 4598910  T
Q  108 aacatcctcatctctgct 125  Q
    |||||| |||| ||||||    
T  4598911 aacatcatcatttctgct 4598928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 38434984 - 38434873
Alignment:
Q  12 tttctaccaacttttctactataggagctaccccca--ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    |||| |||| ||||||||||||||| |||||||| |  |||||||||||| |||||||  ||||| | ||  ||||||| ||||||| ||||||| ||||    
T  38434984 tttccaccatcttttctactataggtgctaccccaattctctctctaatgttgtcatttctaatcttctctcgtctagttttaccacgcatccaatgcaa 38434885  T
Q  110 catcctcatctc 121  Q
    ||||||||||||    
T  38434884 catcctcatctc 38434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 451931 - 451986
Alignment:
Q  70 taatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  451931 taatcctatcatgtctagtcttaccactcatctaacgcaacatactcatctctgct 451986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 25834718 - 25834671
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25834718 ctattttctaccaacttttctactataggtgctacccccactctctct 25834671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 23714510 - 23714622
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||| |||| ||||||||||||| | |||||||  ||||| |||||||  ||||||  |||||||||  |||||||||||||||| |||||||| |||||    
T  23714510 tttccaccatcttttctactatatgtgctaccca-actctatctaatgtcgtcatttttaatcctattttgtctagtcttaccacacatccaacacaaca 23714608  T
Q  112 tcctcatctctgct 125  Q
    | || |||||||||    
T  23714609 ttctaatctctgct 23714622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 24102182 - 24102294
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaaca 111  Q
    |||| |||| ||||||||||||| | |||||||  ||||| |||||||  ||||||  |||||||||  |||||||||||||||| |||||||| |||||    
T  24102182 tttccaccatcttttctactatatgtgctaccca-actctatctaatgtcgtcatttttaatcctattttgtctagtcttaccacacatccaacacaaca 24102280  T
Q  112 tcctcatctctgct 125  Q
    | || |||||||||    
T  24102281 ttctaatctctgct 24102294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 30743655 - 30743545
Alignment:
Q  12 tttctaccaacttttctactataggagctacccccactctct--ctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaa 109  Q
    |||||||||| |||||||| ||| | |||||||| |||||||  |||| |||| |||||  |||||||||| ||||||||||| ||||||||   |||||    
T  30743655 tttctaccaatttttctaccataagtgctacccc-actctcttcctaacggtgacattcccaatcctatcccgtctagtcttagcactcatcatgcgcaa 30743557  T
Q  110 catcctcatctc 121  Q
    ||||||||||||    
T  30743556 catcctcatctc 30743545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 2610625 - 2610578
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  2610625 ctattttctaccaacttttccactataggtgctacccccactctctct 2610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 6238051 - 6238110
Alignment:
Q  58 tggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 117  Q
    ||||||||||| |||| ||||| |||||||||||||| |||||||| |||||||||||||    
T  6238051 tggtgtcattcctaattctatcatgtctagtcttaccgctcatccagcgcaacatcctca 6238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 9647927 - 9647969
Alignment:
Q  83 tctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  9647927 tctagtcttaccacacatccaacgcaacatcctcatctctgct 9647969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 9556628 - 9556724
Alignment:
Q  23 ttttctactataggagctacccccact--ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctca 117  Q
    |||||||||||| | | |||||| |||  |||||||||| |||||||  ||||| ||||| ||||| ||||||||| |||||||| |||||||||||    
T  9556628 ttttctactataagtgttaccccaactttctctctaatgttgtcatttctaatcatatcccgtctaatcttaccacacatccaacacaacatcctca 9556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 43238338 - 43238379
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccact 49  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  43238338 ctattttctaccaacttttctactataggtgctacccccact 43238379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 227359 - 227312
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  227359 ctattttctacaaacttttctaccataggtgctacccccactctctct 227312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 13149308 - 13149233
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctg 123  Q
    ||||||| ||||||||||||| ||||| |||||  | |||||||||||||  |||||| ||||| |||||||||||    
T  13149308 ctctctcaaatggtgtcattcctaatcttatcccttttagtcttaccacttgtccaacacaacaccctcatctctg 13149233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 43752192 - 43752239
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  43752192 ctattttctaccaccttttctactataggtgctaccccaactctctct 43752239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 121
Target Start/End: Complemental strand, 45077709 - 45077670
Alignment:
Q  82 gtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  45077709 gtctagtcttaccacacatccaacgcaacatcctcatctc 45077670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 24583904 - 24583970
Alignment:
Q  59 ggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||||||||| ||||| |||| ||| ||||||||||||||||||  | ||||||| |||||||||||    
T  24583904 ggtgtcattcttaatcatatcatgtttagtcttaccactcatcccgcacaacatcttcatctctgct 24583970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 18188808 - 18188706
Alignment:
Q  17 accaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctc 116  Q
    |||| ||||||||  | ||| |||||||| |||||||| |||| |||||||  | ||| ||||| |||||| ||||| || |||||||| ||||||||||    
T  18188808 accatcttttctagaagaggtgctaccccaactctctccaatgttgtcatttctgatcatatcccgtctagccttac-acacatccaacacaacatcctc 18188710  T
Q  117 atct 120  Q
    ||||    
T  18188709 atct 18188706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 7615325 - 7615251
Alignment:
Q  17 accaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtctagtctt 91  Q
    |||| ||||||||||||||| | |||||| | |||||||||||  ||||||  || |||||||| ||||||||||    
T  7615325 accatcttttctactataggtgttaccccaagtctctctaatgtggtcatttctagtcctatcccgtctagtctt 7615251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 9578981 - 9579053
Alignment:
Q  41 acccccactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatc 113  Q
    ||||| |||||||||||   |||||||  |||| ||||| | |||| ||||||||| ||||||||||||||||    
T  9578981 accccaactctctctaacattgtcatttttaattctatcatatctattcttaccacacatccaacgcaacatc 9579053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 11412758 - 11412711
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctct 55  Q
    |||||||| ||||  |||||||||||||| |||||||| |||||||||    
T  11412758 ctattttccaccatattttctactataggtgctaccccaactctctct 11412711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 14255539 - 14255500
Alignment:
Q  81 tgtctagtcttaccactcatccaacgcaacatcctcatct 120  Q
    |||||||||||||||| |||| || |||||||||||||||    
T  14255539 tgtctagtcttaccacacatcgaaagcaacatcctcatct 14255500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 41779045 - 41779096
Alignment:
Q  74 cctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    ||||||| | ||||||||||| | ||||||||||||||| ||||||| ||||    
T  41779045 cctatcccgactagtcttaccccacatccaacgcaacattctcatctttgct 41779096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 3e-43; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 25690 - 25809
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactct--ctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaac 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  25690 ctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaac 25789  T
Q  106 gcaacatcctcatctctgct 125  Q
     ||||||||| |||||||||    
T  25790 acaacatcctaatctctgct 25809  T

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Target: scaffold0024 (Bit Score: 79; Significance: 2e-37; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 82756 - 82643
Alignment:
Q  10 attttctaccaacttttctactataggagctacccccactctctct--aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgc 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||| |||||||||  ||    
T  82756 attttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcttaatcctatcatgtctagtcttactactcatccagtgc 82657  T
Q  108 aacatcctcatctc 121  Q
    ||||||||||||||    
T  82656 aacatcctcatctc 82643  T

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Target: scaffold0113 (Bit Score: 77; Significance: 4e-36; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 11841 - 11962
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccact----ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatcca 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||    |||||| |||||||||||| |||||||||  |||||||||||||| ||||||||    
T  11841 ctattttctaccaacttttctactataggtgctacccccactatctctctctgatggtgtcattcctaatcctattatgtctagtcttaccgctcatcca 11940  T
Q  104 acgcaacatcctcatctctgct 125  Q
     |||||||||||||||||||||    
T  11941 gcgcaacatcctcatctctgct 11962  T

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Target: scaffold0036 (Bit Score: 73; Significance: 9e-34; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 8 - 123
Target Start/End: Original strand, 4516 - 4634
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccc---cactctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaa 104  Q
    ||||||| ||||||||||||||||||||| || |||||   | |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  4516 ctattttttaccaacttttctactataggtgccaccccactctctctctctaatggtgtcatttataatcctatcatgtctagtcttaccattcatccaa 4615  T
Q  105 cgcaacatcctcatctctg 123  Q
    |||||||||||||| ||||    
T  4616 cgcaacatcctcatatctg 4634  T

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Target: scaffold0570 (Bit Score: 71; Significance: 1e-32; HSPs: 2)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 1193 - 1271
Alignment:
Q  8 ctattttctaccaacttttctactataggagctacccccactctctctaatggtgtcattcataatcctatcctgtcta 86  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1193 ctattttctaccaacttttctactataggtgctaccctcactctctctaatggtgtcattcataatcctatcctgtcta 1271  T

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Target: scaffold0570; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 2589 - 2634
Alignment:
Q  80 ctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 125  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||    
T  2589 ctgtatagtcttaccactcatccaatgaaacatcctcatctctgct 2634  T

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Target: scaffold0045 (Bit Score: 50; Significance: 5e-20; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 86894 - 86967
Alignment:
Q  48 ctctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctc 121  Q
    ||||||||||||||||||||  ||||| |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  86894 ctctctctaatggtgtcatttctaatcttatcctttctggtcttaccactcatccagcgcaacatcctcatctc 86967  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 347249 - 347322
Alignment:
Q  50 ctctctaatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctg 123  Q
    |||||||||| ||||||| || |||||||||  |||| ||| ||||| |||||||||||| | |||||| ||||    
T  347249 ctctctaatgttgtcatttattatcctatcccatctactctcaccacacatccaacgcaaaaccctcatgtctg 347322  T

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