View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5676-7 (Length: 151)

Name: Solexa-NF5676-7
Description: NF5676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5676-7
Solexa-NF5676-7
[»] chr6 (12 HSPs)
chr6 (8-151)||(5258707-5258851)
chr6 (26-151)||(9706375-9706501)
chr6 (8-151)||(5631398-5631543)
chr6 (8-151)||(10100414-10100558)
chr6 (26-149)||(20428195-20428319)
chr6 (8-112)||(33495788-33495892)
chr6 (8-95)||(30670469-30670556)
chr6 (13-147)||(27790742-27790877)
chr6 (64-133)||(3632653-3632723)
chr6 (84-151)||(2689313-2689381)
chr6 (13-62)||(2680697-2680746)
chr6 (92-151)||(26291444-26291504)
[»] chr5 (21 HSPs)
chr5 (8-151)||(3301430-3301574)
chr5 (8-151)||(3394292-3394435)
chr5 (26-151)||(16347959-16348085)
chr5 (8-151)||(1274846-1274990)
chr5 (8-151)||(24178105-24178249)
chr5 (8-151)||(20318572-20318716)
chr5 (8-151)||(1288146-1288290)
chr5 (8-151)||(12492944-12493088)
chr5 (26-151)||(10638896-10639022)
chr5 (8-151)||(2076031-2076175)
chr5 (8-150)||(28977415-28977558)
chr5 (13-133)||(17341776-17341897)
chr5 (26-133)||(27302522-27302630)
chr5 (26-138)||(43558384-43558497)
chr5 (49-146)||(36200404-36200502)
chr5 (15-127)||(23979820-23979930)
chr5 (38-133)||(25937682-25937779)
chr5 (15-99)||(27518-27602)
chr5 (8-133)||(37124150-37124277)
chr5 (80-148)||(38579061-38579130)
chr5 (76-151)||(6368482-6368558)
[»] chr1 (24 HSPs)
chr1 (8-151)||(32083302-32083446)
chr1 (8-147)||(8671501-8671641)
chr1 (26-151)||(51601657-51601783)
chr1 (8-151)||(1210326-1210470)
chr1 (8-151)||(43240938-43241082)
chr1 (8-151)||(51441321-51441465)
chr1 (8-151)||(49347950-49348095)
chr1 (13-151)||(37463422-37463558)
chr1 (8-151)||(32066828-32066969)
chr1 (26-151)||(34827659-34827785)
chr1 (26-151)||(27445497-27445623)
chr1 (8-134)||(46226886-46227013)
chr1 (13-126)||(40419267-40419381)
chr1 (76-130)||(28528230-28528285)
chr1 (15-129)||(52641033-52641145)
chr1 (15-151)||(35828950-35829087)
chr1 (22-134)||(16273406-16273516)
chr1 (81-133)||(19936175-19936228)
chr1 (14-130)||(52421017-52421133)
chr1 (79-151)||(51234267-51234339)
chr1 (76-138)||(7921576-7921639)
chr1 (64-133)||(12807662-12807732)
chr1 (76-143)||(6640775-6640843)
chr1 (107-151)||(30202687-30202731)
[»] chr7 (21 HSPs)
chr7 (8-151)||(32630188-32630332)
chr7 (8-151)||(46356408-46356552)
chr7 (8-151)||(37616497-37616641)
chr7 (8-151)||(31004805-31004948)
chr7 (8-147)||(38606587-38606726)
chr7 (8-151)||(39906936-39907080)
chr7 (8-151)||(49028848-49028992)
chr7 (8-151)||(33350363-33350507)
chr7 (8-151)||(36651575-36651719)
chr7 (8-147)||(36869850-36869990)
chr7 (26-151)||(11593558-11593685)
chr7 (26-151)||(24177752-24177878)
chr7 (13-151)||(48918974-48919113)
chr7 (76-147)||(43793601-43793673)
chr7 (109-151)||(418965-419007)
chr7 (80-125)||(18608273-18608319)
chr7 (80-125)||(18626559-18626605)
chr7 (80-125)||(18637233-18637279)
chr7 (80-125)||(18650668-18650714)
chr7 (76-127)||(21517905-21517957)
chr7 (112-151)||(35906758-35906797)
[»] chr3 (19 HSPs)
chr3 (13-151)||(25190965-25191104)
chr3 (8-149)||(52138409-52138551)
chr3 (8-151)||(47542268-47542412)
chr3 (8-151)||(51448266-51448410)
chr3 (26-151)||(38849693-38849819)
chr3 (28-151)||(27917173-27917297)
chr3 (13-143)||(19757654-19757785)
chr3 (13-125)||(19736752-19736865)
chr3 (13-151)||(48221370-48221509)
chr3 (13-125)||(29817091-29817204)
chr3 (8-133)||(9258464-9258586)
chr3 (8-121)||(43111606-43111717)
chr3 (13-87)||(19757570-19757644)
chr3 (26-130)||(32490302-32490407)
chr3 (76-151)||(26489966-26490042)
chr3 (10-127)||(30724381-30724499)
chr3 (77-142)||(44395080-44395146)
chr3 (83-151)||(28245093-28245162)
chr3 (103-151)||(54425463-54425511)
[»] scaffold0018 (1 HSPs)
scaffold0018 (8-151)||(31049-31193)
[»] chr4 (24 HSPs)
chr4 (8-151)||(27450730-27450874)
chr4 (8-151)||(31960371-31960515)
chr4 (8-151)||(23906858-23907002)
chr4 (24-151)||(47265761-47265889)
chr4 (8-151)||(48174650-48174794)
chr4 (8-151)||(56374871-56375015)
chr4 (26-151)||(435828-435954)
chr4 (26-151)||(33226808-33226934)
chr4 (8-151)||(1777572-1777716)
chr4 (8-151)||(48623084-48623228)
chr4 (8-151)||(53707375-53707519)
chr4 (8-151)||(39708038-39708182)
chr4 (30-151)||(16002532-16002653)
chr4 (8-151)||(10775976-10776120)
chr4 (8-151)||(41427420-41427564)
chr4 (81-151)||(50286625-50286696)
chr4 (28-129)||(17666617-17666716)
chr4 (8-146)||(17667891-17668024)
chr4 (28-138)||(30853017-30853128)
chr4 (76-120)||(30807247-30807292)
chr4 (76-123)||(20917631-20917679)
chr4 (76-130)||(39754949-39755004)
chr4 (82-143)||(1211955-1212017)
chr4 (75-151)||(42037509-42037586)
[»] chr2 (21 HSPs)
chr2 (8-151)||(41763606-41763750)
chr2 (8-151)||(2610109-2610253)
chr2 (8-151)||(4807173-4807317)
chr2 (8-151)||(11992663-11992807)
chr2 (27-151)||(45368181-45368307)
chr2 (26-151)||(24584163-24584289)
chr2 (13-149)||(30743209-30743346)
chr2 (8-131)||(8180361-8180485)
chr2 (13-151)||(38453177-38453315)
chr2 (22-151)||(13148908-13149038)
chr2 (8-151)||(452179-452317)
chr2 (26-151)||(3865671-3865797)
chr2 (51-151)||(3244208-3244304)
chr2 (8-146)||(17581053-17581188)
chr2 (26-99)||(12475031-12475104)
chr2 (8-151)||(37281688-37281834)
chr2 (8-134)||(13592925-13593049)
chr2 (30-127)||(36038823-36038921)
chr2 (76-127)||(876781-876833)
chr2 (80-138)||(14769943-14770002)
chr2 (76-122)||(23866304-23866351)
[»] chr8 (18 HSPs)
chr8 (8-151)||(12492399-12492543)
chr8 (8-151)||(36565798-36565942)
chr8 (8-138)||(15215840-15215971)
chr8 (8-151)||(36544733-36544877)
chr8 (46-144)||(42854568-42854667)
chr8 (26-151)||(4033051-4033177)
chr8 (8-147)||(33830794-33830931)
chr8 (13-151)||(8879991-8880130)
chr8 (22-151)||(28300665-28300792)
chr8 (8-125)||(18849698-18849816)
chr8 (8-138)||(38667140-38667269)
chr8 (26-129)||(41444883-41444987)
chr8 (13-127)||(25985128-25985241)
chr8 (64-133)||(13984672-13984742)
chr8 (8-53)||(13984211-13984256)
chr8 (8-56)||(42854666-42854714)
chr8 (79-123)||(45332072-45332117)
chr8 (76-122)||(43732230-43732277)
[»] scaffold0113 (1 HSPs)
scaffold0113 (28-151)||(12155-12279)
[»] scaffold0570 (1 HSPs)
scaffold0570 (28-147)||(2831-2951)
[»] scaffold0024 (1 HSPs)
scaffold0024 (54-151)||(82348-82446)
[»] scaffold0171 (1 HSPs)
scaffold0171 (48-132)||(5813-5898)
[»] scaffold0045 (1 HSPs)
scaffold0045 (14-100)||(88532-88618)


Alignment Details
Target: chr6 (Bit Score: 117; Significance: 6e-60; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 6e-60
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 5258851 - 5258707
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5258851 tgagtagaagcaagacaaagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcataccccaagt 5258752  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  5258751 tacacagtttaaatatcttgggtccatagtacaaaatgacggaga 5258707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 9706375 - 9706501
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  9706375 agtatatggaatgtaacttcagcaaaaggagaagtgggtataccttggagatgaaagttggagatcatatcataccccaagttacacggtttaaatatct 9706474  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||||| |||| |||||| |||||    
T  9706475 tgggtccatggtacaaaatgatggaga 9706501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 8e-44
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 5631398 - 5631543
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||||    
T  5631398 tgagtagaagcaagacaaagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttgcaggtgaaagttagagatcatatcataccccaagt 5631497  T
Q  107 tacacagtttaaata-tcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||| | |||||||||| |||| ||||||||||||    
T  5631498 tacacggtttaaatatttttgggtccatagtacaaaatgacggaga 5631543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 10100558 - 10100414
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  10100558 tgagtagaagcaagacggagtatatggaatgtaactttagcaaaatgagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 10100459  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||||| |||| ||||| ||||||    
T  10100458 tacacggtttaaatatcttgggtccatagtacaaaatgtcggaga 10100414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 20428319 - 20428195
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatct 124  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||| |||||||| | |||||||||| |    
T  20428319 agtatatggaatgtaacttcagcaaaaggagaattaggtctacctaggaggtgaaagttggagatcatatcataccacaagttacgcggtttaaatatat 20428220  T
Q  125 tgggtccattgtactaaatgacgga 149  Q
    ||||||||  |||| ||| ||||||    
T  20428219 tgggtccacagtacaaaacgacgga 20428195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 33495788 - 33495892
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagtt 107  Q
    |||| |||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| ||||    
T  33495788 tgagtagaagcaagacagagtatatggaatgtaacttcatcaaaaggagaagtaggtctaccttggaggtgaaagttgaagatcatatcataccctagtt 33495887  T
Q  108 acaca 112  Q
    |||||    
T  33495888 acaca 33495892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 30670469 - 30670556
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatat 95  Q
    ||||||||||||| ||  ||||||| ||||||| ||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  30670469 tgagaagaagcaagacggagtatatagaatgtatctttagcaaaaggagaagtaggtataccttggaggtgaaagttggagatcatat 30670556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 27790742 - 27790877
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatac-ccaagttacac 111  Q
    |||||||| |||  ||||||||| |||||||||| |||||||| |||| | |||||| |||| ||||| || |||| |||||  |||| |||| |||||     
T  27790742 agaagcaagacagggtatatggagtgtaacttcaacaaaaggataagtagttctaccatggaggtgaaggtgggaggtcataaaatactccaaattacat 27790841  T
Q  112 agtttaaatatcttgggtccattgtactaaatgacg 147  Q
     ||||||||||||||| ||||| |||| ||||||||    
T  27790842 ggtttaaatatcttggatccatagtacaaaatgacg 27790877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 3632653 - 3632723
Alignment:
Q  64 tctaccttggaagtgaaagttggagatcatatcataccc-aagttacacagtttaaatatcttgggtccat 133  Q
    |||||||| || ||||||||||||||||||||||||||| || ||||||  |||||||||||||| |||||    
T  3632653 tctacctttgaggtgaaagttggagatcatatcataccctaaattacacgatttaaatatcttggatccat 3632723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 2689313 - 2689381
Alignment:
Q  84 tggagatcatatcataccc-aagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||||| || |||| ||| ||||||||    
T  2689313 tggagatcatatcataccctaagttacacggtttaaatattttgggtctatagtacaaaacgacggaga 2689381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 2680746 - 2680697
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgg 62  Q
    |||||||| ||| |||||||| ||||||| ||||||||||||||||||||    
T  2680746 agaagcaagacagagtatatgaaatgtaatttcagcaaaaggagaagtgg 2680697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 26291444 - 26291504
Alignment:
Q  92 atatcataccc-aagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||| ||||||||| |||||||||||||| |||||| |||  |||||| |||||    
T  26291444 atatcataccctaagttacaccgtttaaatatcttgagtccatagtagaaaatgatggaga 26291504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 2e-50; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 3301430 - 3301574
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  3301430 tgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcataccccaagt 3301529  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||||| |||| |||||| |||||    
T  3301530 tacacggtttaaatatcttgggtccatagtaccaaatgaaggaga 3301574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 3394292 - 3394435
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  3394292 tgagtagaagcaagacagagtatatggaatgtaa-ttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcataccccaagt 3394390  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||    
T  3394391 tacacggtttaaatatcttgggtccatagtacaaaatgacggaga 3394435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 16348085 - 16347959
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  16348085 agtatatgaaatgtaacttcagcaaaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatct 16347986  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    || |||||| |||| ||||||||||||    
T  16347985 tgtgtccatagtacaaaatgacggaga 16347959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 1274846 - 1274990
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||||    
T  1274846 tgagtagaagcaagacggagtatatggaatgtaacttcagcgaaaggagaagtaggtctaccttggagatgaaagttggagatcatatcataccccaagt 1274945  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  1274946 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 1274990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 24178105 - 24178249
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcataccc-aagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24178105 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaagtgaaagttggagatcatatcataccctaagt 24178204  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||| ||||||||||| | |||| ||||||||||||    
T  24178205 tacacggtttaaagatcttgggtccttcgtacaaaatgacggaga 24178249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 20318572 - 20318716
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| | ||||||||||| |||||||||||||||||||||||| |||||||    
T  20318572 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtagttctaccttggaggtgaaagttggagatcatatcataccccaagt 20318671  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  20318672 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 20318716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 1288290 - 1288146
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  ||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||    
T  1288290 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaagtctaccttggaggtgaaagttggagatcatatcataccccaagt 1288191  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| |||||||||||||| |||| | |||| ||||||||||||    
T  1288190 tacacggtttaaatatcttgagtccttcgtacaaaatgacggaga 1288146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 12493088 - 12492944
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| | ||||||||||| || ||||||||||||||||||||| |||||||    
T  12493088 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtagctctaccttggaggtaaaagttggagatcatatcataccccaagt 12492989  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  12492988 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 12492944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 10638896 - 10639022
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    ||||||||||||||||||||||   |||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  10638896 agtatatggaatgtaacttcagtggaaggagaagtaggtctaccttggaggtgaaagttggaaatcatatcataccccaagttacacggtttaaatatct 10638995  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||| | |||| ||||||||||||    
T  10638996 tgggtccttcgtacaaaatgacggaga 10639022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 2076175 - 2076031
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||| |||| ||||||||||||||||||  |||||||||  | ||||||||||| |||||||||||||||||||||||| |||||||    
T  2076175 tgagtagaagcaagacagagtacatggaatgtaacttcagcggaaggagaagcagttctaccttggaggtgaaagttggagatcatatcataccccaagt 2076076  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||| ||||    
T  2076075 tacacggtttaaatatcttgggtccttcgtacaaaatgacagaga 2076031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 28977558 - 28977415
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||| |  |||||||||| |||||||||| || |||||||||||||||||||||||| |||||||    
T  28977558 tgagtagaagcaagacggagtatatggaatgtaacttcaacggaaggagaagtaggtctaccttagaggtgaaagttggagatcatatcataccccaagt 28977459  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggag 150  Q
     |||| ||||||||||||||||||| | |||| |||||||||||    
T  28977458 cacacggtttaaatatcttgggtccttcgtacaaaatgacggag 28977415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 17341897 - 17341776
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacac 111  Q
    ||||||||||   ||||||||||||||||||| || ||||||  || ||| ||||||||||| ||| ||||||||||||||||||||||  || |||||     
T  17341897 agaagcaaaattgagtatatggaatgtaactttagaaaaaggccaaatggttctaccttggaggtggaagttggagatcatatcatacctgaaattacat 17341798  T
Q  112 agtttaaatatcttgggtccat 133  Q
     |||||||||| ||||||||||    
T  17341797 ggtttaaatatattgggtccat 17341776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 27302630 - 27302522
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatct 124  Q
    ||||||||||||||||||||| |||||||  |||| | ||||||||| | ||||  |||||||||||||||||||| |||  ||||| ||||||||||||    
T  27302630 agtatatggaatgtaacttcaacaaaaggtaaagtagttctaccttgaaggtgagtgttggagatcatatcatacctcaaactacacggtttaaatatct 27302531  T
Q  125 tgggtccat 133  Q
    || ||||||    
T  27302530 tgtgtccat 27302522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 43558497 - 43558384
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatct 124  Q
    |||||||||||||||  || |||||||||  |||||  |||| ||  || ||||||||||||||||||| |||||| ||||||||||  |||||||||||    
T  43558497 agtatatggaatgtagatttagcaaaaggcaaagtgtttctagctcagaggtgaaagttggagatcatagcataccacaagttacacgatttaaatatct 43558398  T
Q  125 tgggtccattgtac 138  Q
    | ||||||||||||    
T  43558397 taggtccattgtac 43558384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 36200404 - 36200502
Alignment:
Q  49 aaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtactaaatgac 146  Q
    |||||||||||| | |||||  |||| |||||||| |||| |||||||||||| |||||||||| |||||||||| |||||| ||| |||| |||||||    
T  36200404 aaaaggagaagtagttctactatggaggtgaaagtgggaggtcatatcatacctcaagttacaccgtttaaatattttgggttcatagtacaaaatgac 36200502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 23979820 - 23979930
Alignment:
Q  15 aagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagttacacagt 114  Q
    |||||| |||| ||||||| |||||||||||| ||||||   |||| | || ||||| || ||||||||||||||||||||||||   |||||||||| |    
T  23979820 aagcaagacatggtatatgtaatgtaacttcaacaaaagacaaagtagttcaaccttagaggtgaaagttggagatcatatcata--gaagttacacaat 23979917  T
Q  115 ttaaatatcttgg 127  Q
    ||| |||||||||    
T  23979918 ttagatatcttgg 23979930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 25937682 - 25937779
Alignment:
Q  38 gtaacttcagcaaaaggagaagtgggtctaccttggaag-tgaaagttggagatcatatca-tacccaagttacacagtttaaatatcttgggtccat 133  Q
    |||| ||||||||||||||||||   ||||||||  ||| ||||||||||||||||||||| | ||||| |||||||  |||||||||||||||||||    
T  25937682 gtaatttcagcaaaaggagaagtatttctaccttaaaaggtgaaagttggagatcatatcattccccaaattacacaaattaaatatcttgggtccat 25937779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 27518 - 27602
Alignment:
Q  15 aagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata 99  Q
    |||||| ||| |||||| |||||||||||||| ||| ||| ||||| | | | ||||||| ||||||||||||||||||||||||    
T  27518 aagcaagacagagtatagggaatgtaacttcaacaataggcgaagtagttatgccttggaggtgaaagttggagatcatatcata 27602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 37124150 - 37124277
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaag-gagaagtgggtctaccttggaagtgaaagttggagatcatatcatac-ccaag 105  Q
    |||| |||||||| | | |||||||||||||||| ||||||||||  | |||||   |||||||| || ||||||||||||||||| |||||||  ||||    
T  37124150 tgagcagaagcaagatagagtatatggaatgtaatttcagcaaaaatgtgaagtatttctaccttagaggtgaaagttggagatcaaatcatacaacaag 37124249  T
Q  106 ttacacagtttaaatatcttgggtccat 133  Q
    |||||  ||||||||| |||| ||||||    
T  37124250 ttacattgtttaaatagcttgagtccat 37124277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 38579130 - 38579061
Alignment:
Q  80 aagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtactaaatgacgg 148  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||| ||  || |||| |||||||||    
T  38579130 aagttggagatcatattatagcacaagttacacagtttaaatatcttgagttgatagtacaaaatgacgg 38579061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 6368558 - 6368482
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||| ||||||||||| |||||| ||||||||||| |||||||||||||  || || |||| ||| ||||||||    
T  6368558 gtgaaagatggagatcataacataccacaagttacacaatttaaatatcttgtatctatagtacaaaacgacggaga 6368482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 2e-50; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 32083446 - 32083302
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  32083446 tgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcataccccaagt 32083347  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    | |||| |||||||||||||||||||| |||| ||||||||||||    
T  32083346 tgcacaatttaaatatcttgggtccatagtacaaaatgacggaga 32083302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 8671501 - 8671641
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcataccc-aagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  8671501 tgagtagaagcaagacggagtatatggaatgtaacttcagcagaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccctaagt 8671600  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacg 147  Q
    ||||| ||||||||||||||||||| | |||| ||||||||    
T  8671601 tacacggtttaaatatcttgggtccttcgtacaaaatgacg 8671641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 51601657 - 51601783
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  51601657 agtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatct 51601756  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||| | |||| ||||||||||||    
T  51601757 tgggtccttcgtacaaaatgacggaga 51601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 1210326 - 1210470
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  1210326 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 1210425  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||||||||||||||||  | |||| |||||| |||||    
T  1210426 tacacagtttaaatatcttgggtctttcgtacaaaatgatggaga 1210470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 43241082 - 43240938
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| | ||||||||||| |||||||||||||||||||||||| |||||||    
T  43241082 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtagatctaccttggaggtgaaagttggagatcatatcataccccaagt 43240983  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||| ||| | |||| ||||||||||||    
T  43240982 tacacggtttaaatatcttggatccttcgtacaaaatgacggaga 43240938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 51441465 - 51441321
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||| | |||||||||||||||||||||||| |||||||    
T  51441465 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttgaaggtgaaagttggagatcatatcataccccaagt 51441366  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||||||||||||||||  |  ||| ||||||||||||    
T  51441365 tacacagtttaaatatcttgggtctttcatacaaaatgacggaga 51441321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 49348095 - 49347950
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||| |||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  49348095 tgagtagaagcaagacggagtatatcgaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 49347996  T
Q  107 tacac-agtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||  ||||||||||||||||||| | |||| ||||||||||||    
T  49347995 tacactggtttaaatatcttgggtccttcgtacaaaatgacggaga 49347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 37463558 - 37463422
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatac-ccaagttacac 111  Q
    |||| ||| ||| ||||||||||||||||||||||||||||  | |||   ||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  37463558 agaaacaagacagagtatatggaatgtaacttcagcaaaagccggagt---tctaccttggaggtgaaagttggagatcatatcatactccgagttacac 37463462  T
Q  112 agtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||||||| |||||| |||| ||||||||||||    
T  37463461 agtttaaatatcttgagtccatagtacaaaatgacggaga 37463422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 32066969 - 32066828
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagtt 107  Q
    |||| |||||||  |||||||||||| ||||||| || ||||||||| ||||| | |||||||| || |||||| |||||||||||||||||  ||||||    
T  32066969 tgagtagaagcatgacatagtatatgtaatgtaattttagcaaaaggtgaagtagttctaccttagaggtgaaaattggagatcatatcata--caagtt 32066872  T
Q  108 acacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||||||| |||||| ||| |||| ||||||| ||||    
T  32066871 acacagtttaaatattttgggttcatagtacaaaatgacagaga 32066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 34827785 - 34827659
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcataccc-aagttacacagtttaaatatct 124  Q
    ||||||||||||||||||||| |||||| ||||||||  | |   |||| |||||||| |||||||||||||||||| ||||||||  ||||||||||||    
T  34827785 agtatatggaatgtaacttcatcaaaagaagaagtggtcccatgatggaggtgaaagtgggagatcatatcataccctaagttacaaggtttaaatatct 34827686  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||||| |||| ||||||||||||    
T  34827685 tgggtccatagtacaaaatgacggaga 34827659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 27445497 - 27445623
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    ||||||||||||||||||| ||  |||| |||||| | | ||||||| | |||||||||||||||| ||||||| |||||||||||| |||||| ||| |    
T  27445497 agtatatggaatgtaactttagtcaaagaagaagtagctttaccttgcaggtgaaagttggagatcttatcataccccaagttacacggtttaattatgt 27445596  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||||| |||| |||||| |||||    
T  27445597 tgggtccatagtacaaaatgatggaga 27445623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 4e-21
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 46227013 - 46226886
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagt 106  Q
    |||| |||||||||||| ||| |||| ||||||||||||||||||||   ||| |  |||| ||||| ||| ||||||||||||||| ||||||   |||    
T  46227013 tgagtagaagcaaaacaaagtttatgaaatgtaacttcagcaaaaggcagagtagtactactttggaggtgcaagttggagatcataccataccttgagt 46226914  T
Q  107 tacacagtttaaatatcttgggtccatt 134  Q
    ||||| ||||||||||||||||||||||    
T  46226913 tacacggtttaaatatcttgggtccatt 46226886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 40419267 - 40419381
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacac 111  Q
    |||||||  |||||||||||||||||||| || |||||||||  |||    |||| | |  | |||||||||||||||||||||||||| ||||||||||    
T  40419267 agaagcacgacatagtatatggaatgtaattttagcaaaaggcaaagcatttctagcgtaaaggtgaaagttggagatcatatcataccacaagttacac 40419366  T
Q  112 agtttaaatatcttg 126  Q
    |||||||||||||||    
T  40419367 agtttaaatatcttg 40419381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 28528230 - 28528285
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtc 130  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  28528230 gtgaaagttggagatcatagcataccacaagttacacagtttaaatatcttgggtc 28528285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 52641145 - 52641033
Alignment:
Q  15 aagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagttacacagt 114  Q
    |||||| ||||| |||||| | ||||| ||||  |||||| ||||| | || ||||| || ||||||||||||||||||||||||  ||||||||||| |    
T  52641145 aagcaatacataatatatgtagtgtaatttcaataaaaggcgaagtagttcgaccttagaggtgaaagttggagatcatatcata--caagttacacaat 52641048  T
Q  115 ttaaatatcttgggt 129  Q
    |||||||| ||||||    
T  52641047 ttaaatatattgggt 52641033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 35829087 - 35828950
Alignment:
Q  15 aagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacag 113  Q
    |||||| ||| |||||||| ||||||| || ||||||||    ||| | ||||||||||| ||||||| | |||||||||||||||| |||||||| | |    
T  35829087 aagcaagacaaagtatatgaaatgtaattttagcaaaagacatagtagttctaccttggaggtgaaagctagagatcatatcataccacaagttacgctg 35828988  T
Q  114 tttaaatatcttgggtccattgtactaaatgacggaga 151  Q
     ||||| ||||||||||||| |||| ||  ||||||||    
T  35828987 cttaaacatcttgggtccatagtacaaagcgacggaga 35828950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 16273516 - 16273406
Alignment:
Q  22 acatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagttacacagtttaaata 121  Q
    |||||||||||| ||||||| |||| ||||||  ||| | | |  ||||| ||  |||||||||||||||||||||||  ||||||||||| ||||||||    
T  16273516 acatagtatatgtaatgtaatttcaacaaaagatgaaatagtttgaccttagagatgaaagttggagatcatatcata--caagttacacaatttaaata 16273419  T
Q  122 tcttgggtccatt 134  Q
    |||| ||| ||||    
T  16273418 tctttggttcatt 16273406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 19936175 - 19936228
Alignment:
Q  81 agttggagatcatatcataccc-aagttacacagtttaaatatcttgggtccat 133  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  19936175 agttggagatcatatcataccccaagttacatggtttaaatatcttgggtccat 19936228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 52421017 - 52421133
Alignment:
Q  14 gaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacaca 112  Q
    ||||||| ||||  |||||| |||| || |||||||||||| |||||   ||||||||  | ||||||||| ||||||||||||| || ||||||||| |    
T  52421017 gaagcaagacatgatatatgaaatggaatttcagcaaaaggtgaagtatctctaccttataggtgaaagttagagatcatatcatgccacaagttaca-a 52421115  T
Q  113 gtttaaatatcttgggtc 130  Q
    ||||||||| ||||||||    
T  52421116 gtttaaatagcttgggtc 52421133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 51234267 - 51234339
Alignment:
Q  79 aaagttggagatcatatcatacccaagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||||||||||||||||||  |||||| || ||||||||||||||| |||||| || | |||||| |||||    
T  51234267 aaagttggagatcatatcataaacaagtttcatagtttaaatatcttgagtccatagtgcaaaatgatggaga 51234339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 7921576 - 7921639
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtac 138  Q
    ||||||||||||||||||||| |||| ||||||||||  |||| ||||||||| ||||| ||||    
T  7921576 gtgaaagttggagatcatatcttaccacaagttacacgatttatatatcttggatccatagtac 7921639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 12807732 - 12807662
Alignment:
Q  64 tctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccat 133  Q
    |||||||| || ||||||||||  |||| ||||||||  ||||||||||| |||||||||||||| |||||    
T  12807732 tctaccttagaggtgaaagttgaggatcgtatcatactacaagttacacaatttaaatatcttggatccat 12807662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 6640775 - 6640843
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtactaaat 143  Q
    ||||||||| |||||||||| | ||| |||||||||| |||||||||||||| ||| || |||| ||||    
T  6640775 gtgaaagttagagatcatattacaccacaagttacacggtttaaatatcttgagtctatagtacaaaat 6640843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 30202731 - 30202687
Alignment:
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  30202731 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 30202687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 5e-48; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 5e-48
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 32630188 - 32630332
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  32630188 tgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcataccccaagt 32630287  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| |||||||||||||||||||||  ||| |||||| |||||    
T  32630288 tacacggtttaaatatcttgggtccatattacaaaatgatggaga 32630332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 46356552 - 46356408
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  46356552 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 46356453  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||    
T  46356452 tacacggtttaaatatcttgggtcctttgtacaaaatgacggaga 46356408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 37616497 - 37616641
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||    
T  37616497 tgagtagaagcaagacggagtatatggaatgtaacttcagcagaaggagaagtaggtctaccttggaggtgaaaggtggagatcatatcataccccaagt 37616596  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||  |||||||||||||||||| |||||| ||||||||||||    
T  37616597 tacacgatttaaatatcttgggtcctttgtacaaaatgacggaga 37616641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 31004805 - 31004948
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||| |||||||||||||| ||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  31004805 tgagtagaagcaagacagagtatatggaatgttacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 31004904  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||| ||| | |||| ||||||||||||    
T  31004905 tacac-gtttaaatatcttggctccttcgtacaaaatgacggaga 31004948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 38606587 - 38606726
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||| ||  ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  38606587 tgagtagaagcaagacggagtatatggaatgtaatttttgcaaaaggagaagtgggtctacctt-gaggtgaaagttggagatcatatcatatcccaagt 38606685  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacg 147  Q
    ||||| ||||||||||||||||||||| |||| ||||||||    
T  38606686 tacacggtttaaatatcttgggtccatagtacaaaatgacg 38606726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 39907080 - 39906936
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||| ||    
T  39907080 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcatatcccatgt 39906981  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||  | |||| ||||||||||||    
T  39906980 tacacggtttaaatatcttgggtcattcgtacaaaatgacggaga 39906936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 49028848 - 49028992
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||||   |||||||||| ||||||||||||| ||||||||||||||||| |||||| |||||||    
T  49028848 tgagtagaagcaagacggagtatatggaatgtaacttcaggggaaggagaagtaggtctaccttggaggtgaaagttggagatcagatcataccccaagt 49028947  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| |||||| |||||| |||||    
T  49028948 tacacggtttaaatatcttgggtcctttgtacaaaatgatggaga 49028992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 33350507 - 33350363
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  ||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  33350507 tgagtagaagcaagacgaagtatatggaatgtaacttcagcggaagaagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 33350408  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| |||||||||||| |||||  | |||| ||||||||||||    
T  33350407 tacacggtttaaatatctagggtctttcgtacaaaatgacggaga 33350363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 36651575 - 36651719
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||| |||||||||  ||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  36651575 tgagtagaagcaagacggagtatatggaatggaacttcagcggaagaagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 36651674  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||| | ||||||||||||||||||| | |||| ||||||||||||    
T  36651675 tacgcggtttaaatatcttgggtccttcgtacaaaatgacggaga 36651719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 36869990 - 36869850
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||||  ||||  ||||||| |||| |||||||||||||| ||||||||| ||||| |    
T  36869990 tgagtagaagcaagacatagtatatggaatgtaacttcaggaaaagggaaagtatgtctaccctggaggtgaaagttggagagcatatcataccccaaat 36869891  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacg 147  Q
    ||| | ||||||||||||||| ||||| |||| ||||||||    
T  36869890 tacgcggtttaaatatcttggatccatagtacaaaatgacg 36869850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 11593558 - 11593685
Alignment:
Q  26 agtatatggaatgtaacttcagca-aaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatc 123  Q
    |||||||| ||||||||||||||  ||||||||||| ||||||||||||| |||||||||| ||||||||||||| ||||||||| || |||||||||||    
T  11593558 agtatatgaaatgtaacttcagcggaaaggagaagtaggtctaccttggaggtgaaagttgaagatcatatcataccccaagttagacggtttaaatatc 11593657  T
Q  124 ttgggtccattgtactaaatgacggaga 151  Q
    |||||||| | |||| |||||| |||||    
T  11593658 ttgggtccttcgtacaaaatgatggaga 11593685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 24177878 - 24177752
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||| |  |||| |||||||||||||||||| ||||| |||||| |||||||||||     
T  24177878 agtatatggaatgtaacttcagcaaaagaagaagtaggtctagcttgtagatgaaggttggagatcatatcataccccaatttacacggtttaaatatca 24177779  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
     ||||| || |||| ||||||||||||    
T  24177778 cgggtcaatagtacaaaatgacggaga 24177752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 48918974 - 48919113
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacac 111  Q
    |||||||| ||  |||||||||||||| ||||||||||| |||||||| ||||||| ||| | || ||||| ||||||||||| | | ||||||||||||    
T  48918974 agaagcaagacggagtatatggaatgtgacttcagcaaatggagaagtaggtctacattgaaggtaaaagtaggagatcatattacaccccaagttacac 48919073  T
Q  112 agtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
     |||||||||| |||| ||||| |||| ||||||||||||    
T  48919074 ggtttaaatattttggatccatagtacaaaatgacggaga 48919113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 43793673 - 43793601
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtactaaatgacg 147  Q
    ||||||||| |||||||||||||||| | ||||||||| ||||||||||||||||| || |||| ||||||||    
T  43793673 gtgaaagttagagatcatatcataccactagttacacattttaaatatcttgggtctatagtacaaaatgacg 43793601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 419007 - 418965
Alignment:
Q  109 cacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  419007 cacaatttaaatatcttgggtccattgtagaaaatgacggaga 418965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 18608319 - 18608273
Alignment:
Q  80 aagttggagatcatatcatacc-caagttacacagtttaaatatctt 125  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  18608319 aagttggagatcatatcatatcacaagttacacattttaaatatctt 18608273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 18626559 - 18626605
Alignment:
Q  80 aagttggagatcatatcata-cccaagttacacagtttaaatatctt 125  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  18626559 aagttggagatcatatcatatcacaagttacacattttaaatatctt 18626605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 18637233 - 18637279
Alignment:
Q  80 aagttggagatcatatcata-cccaagttacacagtttaaatatctt 125  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  18637233 aagttggagatcatatcatatcacaagttacacattttaaatatctt 18637279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 18650668 - 18650714
Alignment:
Q  80 aagttggagatcatatcata-cccaagttacacagtttaaatatctt 125  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  18650668 aagttggagatcatatcatatcacaagttacacattttaaatatctt 18650714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 21517957 - 21517905
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgg 127  Q
    |||||||||||||| || || ||||| ||| ||||||||||||||||||||||    
T  21517957 gtgaaagttggagaccacatgatacctcaatttacacagtttaaatatcttgg 21517905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 35906797 - 35906758
Alignment:
Q  112 agtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||||||||||||||||| | |||| ||||||||||||    
T  35906797 agtttaaatatcttgggtccttcgtacaaaatgacggaga 35906758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 2e-47; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 25190965 - 25191104
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacac 111  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  25190965 agaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcatagcccaagttacac 25191064  T
Q  112 agtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
     |||||||||||||||||| || |||| |||||| |||||    
T  25191065 ggtttaaatatcttgggtctatagtacaaaatgatggaga 25191104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 5e-42
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 52138409 - 52138551
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  52138409 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 52138508  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacgga 149  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||    
T  52138509 tacacggtttaaatatcttgggtccttcgtacaaaatgacgga 52138551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 47542412 - 47542268
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||| |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||    
T  47542412 tgagtagaagcaagacggagtgtatggaatgtaacttcagcagaaggagaagtaggtctaccttggaggtgaaagttggagatcatttcataccccaagt 47542313  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  47542312 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 47542268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 51448410 - 51448266
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||| ||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  51448410 tgagtagaagcaagacggagtatatgaaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 51448311  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  51448310 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 51448266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 38849693 - 38849819
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatct 124  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  38849693 agtatatggaatgtaactacatcaaaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcatacctcaatttacacggtttaaatatct 38849792  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||||  |||| ||||||||||||    
T  38849793 tgggtccacagtacaaaatgacggaga 38849819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 27917173 - 27917297
Alignment:
Q  28 tatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatcttg 126  Q
    |||||||| ||||||||||| |||||||||| | | ||||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  27917173 tatatggattgtaacttcagtaaaaggagaactagttctaccttgaaggtgaaagttggagatcatatcatatcccaagttacacggtttaaatatcttg 27917272  T
Q  127 ggtccattgtactaaatgacggaga 151  Q
     |||||| |||| ||||||||||||    
T  27917273 agtccatagtacaaaatgacggaga 27917297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 19757654 - 19757785
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacac 111  Q
    |||||||| ||| ||||||||||||||||||| |||||||||  |||| |  |||||||||| |||||||||||||||||||||||| |||||||||||     
T  19757654 agaagcaagacagagtatatggaatgtaactttagcaaaaggcaaagtagtcctaccttggaggtgaaagttggagatcatatcataccccaagttacat 19757753  T
Q  112 agtttaaatatcttgggtccattgtactaaat 143  Q
     ||||||||||||||||||||| |||| ||||    
T  19757754 ggtttaaatatcttgggtccatagtacaaaat 19757785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 19736752 - 19736865
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacac 111  Q
    |||||||| ||| |||||||||||||||||||||||||||||   ||| |  |||||||||| |||||||||||||||||||||||| |||||||||||     
T  19736752 agaagcaagacagagtatatggaatgtaacttcagcaaaaggcagagtagtcctaccttggaggtgaaagttggagatcatatcataccccaagttacat 19736851  T
Q  112 agtttaaatatctt 125  Q
     |||||||||||||    
T  19736852 ggtttaaatatctt 19736865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 48221370 - 48221509
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacac 111  Q
    ||||| || |||||||||||| ||||||| |||||||||||| | ||| | |||| ||| || |||||||||| ||||||||||||||| ||||||||||    
T  48221370 agaagtaagacatagtatatgtaatgtaatttcagcaaaaggtgtagtagttctatcttagaggtgaaagttgaagatcatatcataccacaagttacac 48221469  T
Q  112 agtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    | |||||||||||||| | ||| |||| ||||||| ||||    
T  48221470 attttaaatatcttggattcatagtacaaaatgacagaga 48221509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 29817091 - 29817204
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacac 111  Q
    |||| ||| ||| ||||||||||||||||||||| ||||||| ||||| | |||| |||||| ||||||||||||||||||||||||||  |||||||||    
T  29817091 agaatcaagacagagtatatggaatgtaacttcatcaaaaggtgaagttgttctatcttggaggtgaaagttggagatcatatcataccataagttacac 29817190  T
Q  112 agtttaaatatctt 125  Q
     ||| |||||||||    
T  29817191 ggttcaaatatctt 29817204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 9258464 - 9258586
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||| ||||||||||||| |||    ||| || |||||  || || ||||||||||| |||||||    
T  9258464 tgagtagaagcaagacggagtatatggaatgtaacttcaacaaaaggagaagtaggt----cttagaggtgaacattagatatcatatcatatcccaagt 9258559  T
Q  107 tacacagtttaaatatcttgggtccat 133  Q
    ||||| |||||||||||||||||||||    
T  9258560 tacacggtttaaatatcttgggtccat 9258586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 43111717 - 43111606
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagtt 107  Q
    |||| ||||| || |||||||||||| ||||||| ||||||||||| |||||| | | |||||| || |||| |||||||||||||||||||   |||||    
T  43111717 tgagtagaagtaagacatagtatatgtaatgtaatttcagcaaaagaagaagtagttgtaccttagaggtgacagttggagatcatatcata--taagtt 43111620  T
Q  108 acacagtttaaata 121  Q
    ||||| ||||||||    
T  43111619 acacaatttaaata 43111606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 19757570 - 19757644
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttgga 87  Q
    |||||||| ||| ||||||||||||||||||| |||||||||  |||| |  |||||||||| ||||||||||||    
T  19757570 agaagcaagacagagtatatggaatgtaactttagcaaaaggcaaagtagtcctaccttggaggtgaaagttgga 19757644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 32490407 - 32490302
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatct 124  Q
    |||||||| |||| || || ||||||||| ||||||  |||| |||  |  ||||||||| ||||||||||||||| ||||||||||| ||||||| |||    
T  32490407 agtatatgaaatgcaagtttagcaaaaggtgaagtgtttctaacttatagatgaaagttgaagatcatatcataccacaagttacacaatttaaatttct 32490308  T
Q  125 tgggtc 130  Q
    ||||||    
T  32490307 tgggtc 32490302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 26489966 - 26490042
Alignment:
Q  76 gtgaaagttggagatcatatcatac-ccaagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||||| |||||||||||||||| ||||||||||   |||||||||||||| |||||  ||  ||||||||||||    
T  26489966 gtgaaagtgggagatcatatcatactccaagttacatgatttaaatatcttggttccatgatataaaatgacggaga 26490042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 30724499 - 30724381
Alignment:
Q  10 agaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcataccc-aagtta 108  Q
    ||||||||||||||| |||||||| ||||||   | |||||||||  |||||  |||   ||  | ||||| |||||||||||||||||||   ||||||    
T  30724499 agaagaagcaaaacaaagtatatgaaatgtattattagcaaaaggcaaagtgtttctcgtttataggtgaacgttggagatcatatcatactataagtta 30724400  T
Q  109 cacagtttaaatatcttgg 127  Q
    ||||||||| |||||||||    
T  30724399 cacagtttagatatcttgg 30724381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 44395080 - 44395146
Alignment:
Q  77 tgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtactaaa 142  Q
    |||||||||||||||||| || | | ||||||||||  ||||||||||| |||||||| ||||||||    
T  44395080 tgaaagttggagatcataccacaacgcaagttacacgatttaaatatctcgggtccatagtactaaa 44395146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 28245093 - 28245162
Alignment:
Q  83 ttggagatcatatcataccc-aagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||| ||| | |||| |||||| |||||    
T  28245093 ttggagatcatataataccccaagttacacggcttaaatatcttggatccttcgtacaaaatgatggaga 28245162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 54425511 - 54425463
Alignment:
Q  103 aagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||| ||||||||||||||| ||||| |||  ||||||||||||    
T  54425511 aagttacacggtttaaatatcttggatccatagtaaaaaatgacggaga 54425463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 89; Significance: 3e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 31049 - 31193
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  31049 tgagtagaagcaagactgagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaagtgaaagttggagatcatatcataccccaagt 31148  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||| ||||||||||| | |||| ||||||||||||    
T  31149 tacacggtttaaacatcttgggtccttcgtacaaaatgacggaga 31193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 3e-43; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 27450874 - 27450730
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  27450874 tgagtagaagcaagacggagtatttggaatgtaacttcagcaaaaggagaagtgggtataccttggaggtgaaagttggagatcatatcataccccaagt 27450775  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||| ||||||||||||||| || | |||||| |||||    
T  27450774 tacacagtttacatatcttgggtccatagtgcaaaatgatggaga 27450730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 31960515 - 31960371
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||| |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||| |    
T  31960515 tgagtagaagcaagacagagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaatt 31960416  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  31960415 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 31960371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 23907002 - 23906858
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  23907002 tgagtagaagcaagacggagtatatggaatgtaacttcaacggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 23906903  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  23906902 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 23906858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 47265889 - 47265761
Alignment:
Q  24 atagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatat 122  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  47265889 atagtatatgaaatgtaacttcagcaaaaggagaagtaggtctaccttggaggtgaaagttggaggtcatatcataccccaagttacatagtttaaatat 47265790  T
Q  123 cttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||| |||  ||||||||||||    
T  47265789 cttggatccatagtataaaatgacggaga 47265761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 48174794 - 48174650
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  48174794 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 48174695  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| || |||||||||    
T  48174694 tacacggtttaaatatcttgggtccttcgtacaaagtgacggaga 48174650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 56374871 - 56375015
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||||    
T  56374871 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagagcatatcataccccaagt 56374970  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  56374971 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 56375015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 435828 - 435954
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  435828 agtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatct 435927  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||| | |||  ||||||||||||    
T  435928 tgggtccttcgtataaaatgacggaga 435954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 33226808 - 33226934
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  33226808 agtatatggaatgtaacttcagcggaaggacaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatct 33226907  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||| | |||| ||||||||||||    
T  33226908 tgggtccttcgtacaaaatgacggaga 33226934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 1777716 - 1777572
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||    
T  1777716 tgagtagaagcaatacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggaaatcatatcataccccaagt 1777617  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||  |||||||||||||||||| | |||| ||||||| ||||    
T  1777616 tacacgttttaaatatcttgggtccttcgtacaaaatgacagaga 1777572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 48623228 - 48623084
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||| |    
T  48623228 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagagcatatcataccccaaat 48623129  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||  |||||||||||||||||| | |||| ||||||||||||    
T  48623128 tacacgatttaaatatcttgggtccttcgtacaaaatgacggaga 48623084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 53707375 - 53707519
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||| ||||||||||||||   |||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||||    
T  53707375 tgagtagaagcaagacggagtatatcgaatgtaacttcagtggaaggagaagtaggtctaccttggaggtgaaagttgaagatcatatcataccccaagt 53707474  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| || |||||||||||||||| | |||| ||||||||||||    
T  53707475 tacacggtctaaatatcttgggtccttcgtacaaaatgacggaga 53707519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 39708038 - 39708182
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagt 106  Q
    |||| |||||||| ||  |||||||||||| |||||||||||||||||||| | |||||| |||||| |||||| ||||||||||||| ||||| |||||    
T  39708038 tgagtagaagcaagacggagtatatggaatataacttcagcaaaaggagaattaggtctatcttggaggtgaaatttggagatcatattatacctcaagt 39708137  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||  | |||||||||||||||||| || |||| ||||||||||||    
T  39708138 tatgcggtttaaatatcttgggtcgatagtacaaaatgacggaga 39708182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 16002532 - 16002653
Alignment:
Q  30 tatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatcttggg 128  Q
    |||||||| |||||| |||||||||||||||  |||||||||||| || ||||||||| ||||||||||| ||||| |||||| ||||||| |||||||     
T  16002532 tatggaatataactttagcaaaaggagaagttagtctaccttggaggtaaaagttggaaatcatatcataccccaaattacacggtttaaa-atcttggt 16002630  T
Q  129 tccattgtactaaatgacggaga 151  Q
    ||||| |||| ||||||||||||    
T  16002631 tccatagtacaaaatgacggaga 16002653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 10776120 - 10775976
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagt 106  Q
    |||| |||||||  ||||| |||||||||||||| || ||||||||| ||| ||  ||||  || || | |||||||||||||||||||||||| |||||    
T  10776120 tgagcagaagcacgacatactatatggaatgtaattttagcaaaaggcgaaatgtttctagtttagaggggaaagttggagatcatatcataccacaagt 10776021  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||  |||||||||||||||||| ||  ||| |||||| |||||    
T  10776020 tacatggtttaaatatcttgggtctataatacaaaatgatggaga 10775976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 41427420 - 41427564
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| |||| ||||||| ||||||| ||||||||||   ||||| | ||||||||  |||||||| ||| ||||||||||||| |||||||    
T  41427420 tgagtagaagcaagacatggtatatgaaatgtaatttcagcaaaaaacgaagtagttctaccttaaaagtgaaaattgaagatcatatcataccccaagt 41427519  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||   |||||||||||| |  ||| ||||  |||||||||||    
T  41427520 tacacgacttaaatatcttgtgctcatagtacagaatgacggaga 41427564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 50286625 - 50286696
Alignment:
Q  81 agttggagatcatatcataccc-aagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||| |||| | |||| ||||||||||||    
T  50286625 agttggagatcatatcataccccaagttacacggtttaaatatattgtgtccttcgtacaaaatgacggaga 50286696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 17666716 - 17666617
Alignment:
Q  28 tatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagttacacagtttaaatatcttgg 127  Q
    |||||| |||| || |||| ||||||| |||||   |||| ||| || ||||| ||| |||||||||||||||  |||||||||||||||||||||||||    
T  17666716 tatatgtaatgcaatttcatcaaaaggcgaagtatttctatcttagaggtgaacgttagagatcatatcatac--aagttacacagtttaaatatcttgg 17666619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 17668024 - 17667891
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagtt 107  Q
    |||| |||||||| ||||  |||||| ||||||| |||| |||| || ||||| | | |||||| || |||||||||||| |||||||||||  ||||||    
T  17668024 tgagtagaagcaagacat--tatatgtaatgtaatttcaacaaa-ggcgaagtagttataccttagaggtgaaagttggatatcatatcata--caagtt 17667930  T
Q  108 acacagtttaaatatcttgggtccattgtactaaatgac 146  Q
    | | ||||||||||| |||||| ||| |||| |||||||    
T  17667929 atatagtttaaatatattgggttcatagtacaaaatgac 17667891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 30853017 - 30853128
Alignment:
Q  28 tatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttg 126  Q
    ||||||||||||||||| ||||||||  || |    |||| ||| ||  ||||| ||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  30853017 tatatggaatgtaactttagcaaaagttgacggaattctagcttagagttgaaatttggagaacatgtcataccacaagctacacagtttaaatatcttg 30853116  T
Q  127 ggtccattgtac 138  Q
    ||||||| ||||    
T  30853117 ggtccatagtac 30853128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 30807247 - 30807292
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaat 120  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  30807247 gtgaaagttggagatcatatcataccacaagttacacggtttaaat 30807292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 20917631 - 20917679
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatc 123  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||    
T  20917631 gtgaaagttgaagatcatatcataccataagttacacagtttaaatatc 20917679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 39755004 - 39754949
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtc 130  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||||||| ||||||    
T  39755004 gtgaaagttgaagatcatatcataccacaagtcacacactttaaatatcatgggtc 39754949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 1212017 - 1211955
Alignment:
Q  82 gttggagatcatatcatacccaa-gttacacagtttaaatatcttgggtccattgtactaaat 143  Q
    ||||||||||||||||||||  | |||||| ||||||||||||||| |||||| |||| ||||    
T  1212017 gttggagatcatatcataccttacgttacatagtttaaatatcttgtgtccatagtacaaaat 1211955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 42037509 - 42037586
Alignment:
Q  75 agtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||| ||| |||||||||||| || |||||||||| ||||||||||||||  || || |||| ||||||| ||||    
T  42037509 agtgaaatttgaagatcatatcatcccacaagttacacggtttaaatatcttgaatctatagtacaaaatgactgaga 42037586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 3e-43; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 41763750 - 41763606
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  41763750 tgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagattatatcataccccaagt 41763651  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    | |||  |||||||||||||||||||| |||| ||||| ||||||    
T  41763650 tgcacgatttaaatatcttgggtccatagtacaaaatgtcggaga 41763606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 2610109 - 2610253
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  2610109 tgagtagaagcaagacggagtatatgaaatgtaacttcagcagaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 2610208  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||| ||||    
T  2610209 tacacggtttaaatatcttgggtccttcgtacaaaatgacagaga 2610253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 4807173 - 4807317
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  ||||||||||||||||||||||   |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  4807173 tgagtagaagcaagacggagtatatggaatgtaacttcagtggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 4807272  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||||||||||||||||||||  | |||| ||||||||||||    
T  4807273 tacacagtttaaatatcttgggtctttcgtacaaaatgacggaga 4807317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 11992807 - 11992663
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  11992807 tgagtagaagcaagacgaagtatatggaatgtaacttcagtaaaaagagaagtgggtctaccttagaggtgaaagttggagatcatatcataccccaagt 11992708  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| |||||||||||||||||| || |||| |||||| |||||    
T  11992707 tacacggtttaaatatcttgggtctatagtacaaaatgatggaga 11992663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 45368307 - 45368181
Alignment:
Q  27 gtatatggaatgtaacttcagcaaaaggagaagtg--ggtctaccttggaagtgaaagttggagatcatatcatacccaagttacacagtttaaatatct 124  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  45368307 gtatatggaatgtaacttcaacaaaaggagaagtgtgggtctaccttggaggtgaaagttggagatcatatcatacccaaattacacggtttaaatatct 45368208  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    |||||||||  ||| |||||| |||||    
T  45368207 tgggtccataatacaaaatgatggaga 45368181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 24584289 - 24584163
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatct 124  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  24584289 agtatatggaatgtaacttcagcaaaaggagaattatgtctaccttggaggtgaaagttggagatcatatcagaccgcaagttacacggtttaaatatct 24584190  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||||| |||| |||||| |||||    
T  24584189 tgggtccatagtacaaaatgatggaga 24584163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 30743209 - 30743346
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacac 111  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  30743209 agaagaaagacagagtatatggaatgtaacttcagcaaaaggagaaattggtctaccttggaggtgaaagttggagatcataccatatcccaagttacac 30743308  T
Q  112 agtttaaatatcttgggtccattgtactaaatgacgga 149  Q
     ||||||||||||| |||| || |||| ||||||||||    
T  30743309 ggtttaaatatcttaggtcaatagtacaaaatgacgga 30743346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 8180361 - 8180485
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatac-ccaagt 106  Q
    |||| |||||||| ||| |||||||||||||||| |||||   |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  8180361 tgagtagaagcaagacagagtatatggaatgtaatttcagtggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcatactccaagt 8180460  T
Q  107 tacacagtttaaatatcttgggtcc 131  Q
    ||||| |||||||||| ||||||||    
T  8180461 tacacggtttaaatattttgggtcc 8180485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 38453315 - 38453177
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacac 111  Q
    |||||||| ||  ||||||||||||||||| |||||  |||||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  38453315 agaagcaagacggagtatatggaatgtaacatcagcggaaggagaagtag-tctaccttggaggtgaaagttggagatcatatcataccccaagttacac 38453217  T
Q  112 agtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
      |||||||||||||||||| |  ||| ||||||||||||    
T  38453216 gatttaaatatcttgggtccttcatacaaaatgacggaga 38453177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 13148908 - 13149038
Alignment:
Q  22 acatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaat 120  Q
    ||||| |||||||  |||||||||||||||||||||| | | |  |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  13148908 acatattatatggggtgtaacttcagcaaaaggagaaatagtttaaccttggaggtgaaagttggagatcatatcataccccaagttacacggtttaaat 13149007  T
Q  121 atcttgggtccattgtactaaatgacggaga 151  Q
    ||||  ||||||| |||| ||||||||||||    
T  13149008 atctcaggtccatagtacaaaatgacggaga 13149038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 452317 - 452179
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcataccc-aagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  |||||||||| ||||||||||||| ||      ||||||||||||||||||| ||||    
T  452317 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggt------tggagatcatatcataccccaagt 452224  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  452223 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 452179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 3865671 - 3865797
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    |||||||| ||||||||||||||  ||||||||||  |||||||||||| ||||||||||||||||||||  || |||||||||||| |||| |||| ||    
T  3865671 agtatatgaaatgtaacttcagcggaaggagaagtacgtctaccttggaggtgaaagttggagatcatattgtatcccaagttacacggtttcaataact 3865770  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||||| | |||| ||||||||||||    
T  3865771 tgggtccttcgtacaaaatgacggaga 3865797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 3244304 - 3244208
Alignment:
Q  51 aaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagttacacagtttaaatatcttgggtccattgtactaaatgacggag 150  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||||    ||||||||||| ||||||||||||||||||| | |||| |||||||||||    
T  3244304 aaggagaagtaggtctaccttggaggtgaaagttgaagatcatatc----ccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggag 3244209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 17581053 - 17581188
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagtt 107  Q
    |||| ||||||||  ||||||||||| ||||||  ||||| |||| | ||||| | || ||||| |||||||||||| ||||||||||||||  ||||||    
T  17581053 tgagtagaagcaagccatagtatatgtaatgtagtttcagtaaaatgcgaagtagttcgaccttagaagtgaaagttagagatcatatcata--caagtt 17581150  T
Q  108 acacagtttaaatatcttgggtccattgtactaaatgac 146  Q
    ||||||||||||| |||||||| |||||||| |||||||    
T  17581151 acacagtttaaat-tcttgggttcattgtacaaaatgac 17581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 12475104 - 12475031
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata 99  Q
    |||||||||||||||||||||||  |||||||||| |||||||||| || ||||||||||||||||||||||||    
T  12475104 agtatatggaatgtaacttcagcggaaggagaagtaggtctaccttagaggtgaaagttggagatcatatcata 12475031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 9e-19
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 37281688 - 37281834
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgta--acttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaa 104  Q
    |||| |||||||| ||| |||||||| ||||||  |||||| ||||||   |||| | ||||||||||| ||||||||| |||||||| ||||| |||||    
T  37281688 tgagtagaagcaagacaaagtatatgaaatgtagtacttcaacaaaagacaaagtagttctaccttggaggtgaaagtttgagatcatgtcataccccaa 37281787  T
Q  105 gttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    |||||||| |||||||||||| | ||||| |||  |||||| |||||    
T  37281788 gttacacattttaaatatcttagctccatagtataaaatgaaggaga 37281834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 13593049 - 13592925
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagtt 107  Q
    |||| |||||||| |||| |||| || |||||||||||| ||||||  ||||| | || | ||| || |||||||||| |||||||||||||   |||||    
T  13593049 tgagtagaagcaagacatggtatgtgtaatgtaacttcaacaaaagacgaagtagttcaaacttagaggtgaaagttgaagatcatatcata--gaagtt 13592952  T
Q  108 acacagtttaaatatcttgggtccatt 134  Q
    |||||||||| ||||||||||| ||||    
T  13592951 acacagtttagatatcttgggttcatt 13592925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 36038823 - 36038921
Alignment:
Q  30 tatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatcttgg 127  Q
    |||||||||| | |||||||||||| ||||| | ||||||||  || ||||||||| ||||||||||||| ||||| |||||   ||||||||||||||    
T  36038823 tatggaatgtgatttcagcaaaaggcgaagtagttctaccttataactgaaagttgaagatcatatcataccccaatttacatcatttaaatatcttgg 36038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 876781 - 876833
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgg 127  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  876781 gtgaaagttggagatcatatcctaccacaagttacacagtttaaatatgttgg 876833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 14769943 - 14770002
Alignment:
Q  80 aagttggagatcatatcata-cccaagttacacagtttaaatatcttgggtccattgtac 138  Q
    |||||||||||||||||||| |  ||||||||| ||||||||||||| || |||| ||||    
T  14769943 aagttggagatcatatcatagcataagttacacggtttaaatatcttagggccatagtac 14770002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 23866304 - 23866351
Alignment:
Q  76 gtgaaagttggagatcatatcatacc-caagttacacagtttaaatat 122  Q
    ||||||||| |||||||||||||||| ||| ||||||| |||||||||    
T  23866304 gtgaaagttagagatcatatcataccacaaattacacaatttaaatat 23866351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 7e-41; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 12492543 - 12492399
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||  |||||||||||||||||||||||  ||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  12492543 tgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggataagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 12492444  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  12492443 tacacggtttaaatatcttgggtccttcgtacaaaatgacggaga 12492399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 36565942 - 36565798
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| | | |||||||| |||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  36565942 tgagtagaagcaagatagagtatatgaaatgtaacttcaacggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 36565843  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||    
T  36565842 tacacggtttaaatatcttgggtcctttgtacaaaatgacggaga 36565798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 15215971 - 15215840
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcataccc-aagt 106  Q
    |||| |||||||| ||  |||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  15215971 tgagtagaagcaagacggagtacatgaaatgtaacttcagcaaaaggagaagtgggtctaccatggaggtgaaagttggagatcatatcatacccaaagt 15215872  T
Q  107 tacacagtttaaatatcttgggtccattgtac 138  Q
    ||||| |||||||||| |||||||||| ||||    
T  15215871 tacacggtttaaatatattgggtccatagtac 15215840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 36544733 - 36544877
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||||||| ||| ||||||||||||||||||| |||  |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  36544733 tgagtagaagcaagacagagtatatggaatgtaactttagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagt 36544832  T
Q  107 tacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||  ||||||||||| |||| |  | |||| ||||||||||||    
T  36544833 tacaaggtttaaatatcatggggctttcgtacaaaatgacggaga 36544877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 42854667 - 42854568
Alignment:
Q  46 agcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatcttgggtccattgtactaaatg 144  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||    
T  42854667 agcaaaaggagaagtgggtctaccttggaggtgaaaggtggagatcatatcataccccaagttacacggtttaaatatcttgggtccatcgtacaaaatg 42854568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 4033177 - 4033051
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatct 124  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||  ||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  4033177 agtatatggaatgtaacttcagcaaaaggagtagaaggtctaccttggagatgaaagttggagatcatatcataccccaagttacacggtttaagtatct 4033078  T
Q  125 tgggtccattgtactaaatgacggaga 151  Q
    ||||| ||| ||||  ||||| |||||    
T  4033077 tgggttcatagtacacaatgatggaga 4033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 33830931 - 33830794
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagtt 107  Q
    |||| ||||||||||||||||||||| ||||||| || |||||| |  ||||| | |||||||| ||  ||||||||||| ||| |||||||   |||||    
T  33830931 tgagtagaagcaaaacatagtatatgtaatgtaattttagcaaacgacgaagtagttctaccttagacatgaaagttggatatcttatcatat--aagtt 33830834  T
Q  108 acacagtttaaatatcttgggtccattgtactaaatgacg 147  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  33830833 acacagtttaaatattttgggtccattgtacaaaatgacg 33830794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 8880130 - 8879991
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacac 111  Q
    |||||||| ||  |||| ||| |||||||||||||||||||||||||| |||| ||| || | |||||||||| | ||||||||||| ||||||||||||    
T  8880130 agaagcaagacggagtacatgaaatgtaacttcagcaaaaggagaagtaggtcgaccgtgaaggtgaaagttgaaaatcatatcatatcccaagttacac 8880031  T
Q  112 agtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
     ||||||||||||||||  ||| |||| |||||| |||||    
T  8880030 ggtttaaatatcttgggctcatagtacaaaatgaaggaga 8879991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 28300792 - 28300665
Alignment:
Q  22 acatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagttacacagtttaaata 121  Q
    |||||||||||  ||||| | |||| ||||||  ||||| | || ||||| || ||||||| |||||||||||||||||  |||||||||||||||||||    
T  28300792 acatagtatatttaatgtgatttcatcaaaagacgaagtagttcgaccttagaggtgaaagctggagatcatatcatac--aagttacacagtttaaata 28300695  T
Q  122 tcttgggtccattgtactaaatgacggaga 151  Q
    |||||||| ||| |||| ||||||| ||||    
T  28300694 tcttgggttcatggtacaaaatgactgaga 28300665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 9e-16
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 18849816 - 18849698
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagt 106  Q
    |||| |||| ||| ||| |||||||||||| |||| ||| ||||||| ||||| | | | |||| || || ||| ||||||||||||||||| |||||||    
T  18849816 tgagtagaaccaagacaaagtatatggaatataacgtcaacaaaaggtgaagtagttatgccttagaggtaaaaattggagatcatatcataccccaagt 18849717  T
Q  107 tacacagtttaaatatctt 125  Q
    ||||| |||||||||||||    
T  18849716 tacacggtttaaatatctt 18849698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 38667140 - 38667269
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacccaagtt 107  Q
    |||| |||||||| |||| ||||||| ||||||  || ||||||||| ||||| | |||| | | || |||||| |||||||||||||||||  ||||||    
T  38667140 tgagtagaagcaagacatggtatatgtaatgtagttttagcaaaaggcgaagtagttctatcctagaggtgaaacttggagatcatatcata--caagtt 38667237  T
Q  108 acacag-tttaaatatcttgggtccattgtac 138  Q
    ||| || |||||||||||||||| ||| ||||    
T  38667238 acaaagttttaaatatcttgggttcatagtac 38667269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 41444987 - 41444883
Alignment:
Q  26 agtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatct 124  Q
    |||||||||||||||| || ||||||||| ||||    |||| ||| || ||||||| |||||||||||||||||| ||||||||   ||||||||||||    
T  41444987 agtatatggaatgtaattttagcaaaaggcgaagcatttctaacttagaggtgaaaggtggagatcatatcataccacaagttacttggtttaaatatct 41444888  T
Q  125 tgggt 129  Q
    |||||    
T  41444887 tgggt 41444883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 25985128 - 25985241
Alignment:
Q  13 agaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacac 111  Q
    |||||||| ||| |||||||||||||||| || ||||| ||| ||||    |||| ||| || ||||||||||  |||||||||||||| ||||||||||    
T  25985128 agaagcaagacagagtatatggaatgtaagtttagcaagaggcgaagcatttctagcttagaggtgaaagttg--gatcatatcataccacaagttacac 25985225  T
Q  112 agtttaaatatcttgg 127  Q
     |||||||||| ||||    
T  25985226 ggtttaaatatattgg 25985241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 13984672 - 13984742
Alignment:
Q  64 tctaccttggaagtgaaagttggagatcatatcataccc-aagttacacagtttaaatatcttgggtccat 133  Q
    ||||||||| | |||||||  | |||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  13984672 tctaccttgaaggtgaaagaagaagatcatatcataccccaagatacacggtttaaatatcttgggtccat 13984742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 13984211 - 13984256
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaag 53  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||    
T  13984211 tgagtagaagcaagacagagtatatggaatgtaacttcagcaaaag 13984256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 42854714 - 42854666
Alignment:
Q  8 tgagaagaagcaaaacatagtatatggaatgtaacttcagcaaaaggag 56  Q
    |||| |||||||| ||  |||||||||||||||||||||||||||||||    
T  42854714 tgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggag 42854666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 45332117 - 45332072
Alignment:
Q  79 aaagttggagatcatatcatacc-caagttacacagtttaaatatc 123  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||    
T  45332117 aaagttggagatcatgtcataccacaagttacacggtttaaatatc 45332072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 43732277 - 43732230
Alignment:
Q  76 gtgaaagttggagatcatatcata-cccaagttacacagtttaaatat 122  Q
    |||||||||||||||||||||||| | ||||| |||| ||||||||||    
T  43732277 gtgaaagttggagatcatatcatagcacaagtaacacggtttaaatat 43732230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 12279 - 12155
Alignment:
Q  28 tatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatcttg 126  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  12279 tatatagaatgtaacttcagcaaaaggagaagtaggtctaccttcgcggtgaaagttggagatcatatcataccccaagttacatggtttaaatatcttg 12180  T
Q  127 ggtccattgtactaaatgacggaga 151  Q
    ||||||| |||| ||||||||||||    
T  12179 ggtccatagtacaaaatgacggaga 12155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 73; Significance: 1e-33; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 2951 - 2831
Alignment:
Q  28 tatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatcttg 126  Q
    |||||||||||||||||||||  ||||||||||  |||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  2951 tatatggaatgtaacttcagcggaaggagaagtcagtctacattggaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttg 2852  T
Q  127 ggtccattgtactaaatgacg 147  Q
    ||||| | |||| ||||||||    
T  2851 ggtccttcgtacaaaatgacg 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 6e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 82348 - 82446
Alignment:
Q  54 gagaagtgggtctaccttggaagtgaaagttggagatcatatcatacc-caagttacacagtttaaatatcttgggtccattgtactaaatgacggaga 151  Q
    ||||||| ||||| ||||||| | ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| |||  ||||||||||||    
T  82348 gagaagtaggtctgccttggaggcgaaagttggagattatatcataccacaagttacacggtttaaatatcttgggtccatagtaaaaaatgacggaga 82446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 54; Significance: 2e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 5813 - 5898
Alignment:
Q  48 caaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata-cccaagttacacagtttaaatatcttgggtcca 132  Q
    ||||||||||||| | | || |||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  5813 caaaaggagaagtagttatatcttggaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtcca 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 51; Significance: 1e-20; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 88618 - 88532
Alignment:
Q  14 gaagcaaaacatagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcatac 100  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||| |||| |||||| |||||    
T  88618 gaagcaagacagagtatatggaatgtaacttcagcaaaaggagaagtaggtttaccttggagatgaaagatggaaatcataccatac 88532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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