View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5680-42 (Length: 141)
Name: Solexa-NF5680-42
Description: NF5680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5680-42 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 125; Significance: 9e-65; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 9e-65
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 29837222 - 29837350
Alignment:
| Q |
13 |
tgaataacagacaatcattaatggtgatgatgacaagagcctaaaaaagggtacaaaaataatgctaatgaataaaatatttgtttgtttatataaagta |
112 |
Q |
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| T |
29837222 |
tgaataagagacaatcattaatggtgatgatgacaagagcctaaaaaagggtacaaaaataatgctaatgaataaaatatttgtttgtttatataaagta |
29837321 |
T |
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| Q |
113 |
atgatgtggagaatggagagtgccattat |
141 |
Q |
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| T |
29837322 |
atgatgtggagaatggagagtgccattat |
29837350 |
T |
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