View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5682-25 (Length: 128)

Name: Solexa-NF5682-25
Description: NF5682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5682-25
Solexa-NF5682-25
[»] scaffold0012 (2 HSPs)
scaffold0012 (7-124)||(115555-115673)
scaffold0012 (7-127)||(107746-107867)
[»] chr1 (15 HSPs)
chr1 (7-124)||(15899341-15899459)
chr1 (7-124)||(20477309-20477427)
chr1 (7-124)||(20368237-20368355)
chr1 (7-124)||(13654955-13655073)
chr1 (7-115)||(13420708-13420817)
chr1 (9-127)||(13543170-13543289)
chr1 (7-124)||(13506087-13506205)
chr1 (7-124)||(13649846-13649964)
chr1 (7-124)||(13670344-13670462)
chr1 (7-124)||(19138459-19138577)
chr1 (7-120)||(13610159-13610273)
chr1 (7-120)||(13684603-13684717)
chr1 (7-124)||(16468662-16468780)
chr1 (42-117)||(19345013-19345089)
chr1 (7-58)||(16497304-16497355)
[»] chr2 (1 HSPs)
chr2 (7-124)||(38057986-38058104)
[»] scaffold0006 (6 HSPs)
scaffold0006 (7-124)||(144716-144834)
scaffold0006 (7-124)||(56769-56887)
scaffold0006 (7-124)||(139638-139756)
scaffold0006 (7-124)||(167958-168076)
scaffold0006 (7-127)||(218554-218675)
scaffold0006 (45-127)||(109714-109797)
[»] scaffold0069 (1 HSPs)
scaffold0069 (16-120)||(26244-26349)
[»] chr6 (2 HSPs)
chr6 (7-124)||(21814223-21814341)
chr6 (16-124)||(22284217-22284326)
[»] chr8 (1 HSPs)
chr8 (7-124)||(20814967-20815085)
[»] scaffold0406 (1 HSPs)
scaffold0406 (7-120)||(7971-8085)
[»] scaffold0068 (1 HSPs)
scaffold0068 (11-124)||(41141-41255)


Alignment Details
Target: scaffold0012 (Bit Score: 91; Significance: 2e-44; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 115673 - 115555
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  115673 aattaccatacctcttttactgcattatttctatcttctttagttattatatcctccatgataggacaattacttatttcaagatgtttgaggttcataa 115574  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  115573 aactttcaaccaaagtaga 115555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 107867 - 107746
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||||| |||||| ||||| |||| ||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||||    
T  107867 aattatcatacctcttttattgcattttttctttcttttttagctattatctcctccatcatttgacaattacttatttcaaggtgtttgaggttcataa 107768  T
Q  106 aactttcaaccaaagtagatga 127  Q
    ||||||||||||||| ||||||    
T  107767 aactttcaaccaaagaagatga 107746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 2e-44; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 15899341 - 15899459
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| ||||| ||||||||||    
T  15899341 aattaccatacctcttttactgcattatttctatcttctttaactattatctcctccatcatagaacaattacttatttcaaggtgtttaaggttcataa 15899440  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  15899441 aactttcaaccaaagtaga 15899459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 20477427 - 20477309
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  20477427 aattaccatacctcttttactgcattatttctatcttctttagttattatatcctccatgataggacaattacttatttcaagatgtttgaggttcataa 20477328  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  20477327 aactttcaaccaaagtaga 20477309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 20368355 - 20368237
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  20368355 aattaccatacctcttttactgcattatttctatcttctttagtgattatatcctccatgataggacaattacttatttcaagatgtttgaggttcataa 20368256  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  20368255 aactttcaaccaaagtaga 20368237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 13655073 - 13654955
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||||| |||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  13655073 aattaccatacctcttttaatgcattatttctctcctttttagctattatctcctccatcataggacaattacttatttcaaggtgtttgaggttcataa 13654974  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||| ||||||||||||    
T  13654973 aacttttaaccaaagtaga 13654955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 13420817 - 13420708
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  13420817 aattaccatacctcttccactgcattatttctatcttcttcagctattatctcctccatcataggacaattagttatttcaaggtgtttgaggttcataa 13420718  T
Q  106 aactttcaac 115  Q
    ||||||||||    
T  13420717 aactttcaac 13420708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 13543289 - 13543170
Alignment:
Q  9 ttaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataaaa 107  Q
    |||||| || ||||| | |||||| ||||| |||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  13543289 ttaccatacatctttcaatgcattgtttctgtcttctttagctataatctccaccatcataggacaattacttatttcaaggtgtttgaggttcataaaa 13543190  T
Q  108 ctttcaaccaaagtagatga 127  Q
    ||||||||||||| ||||||    
T  13543189 ctttcaaccaaagaagatga 13543170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 13506205 - 13506087
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||| | |||||| ||||| |||| ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  13506205 aattagcatacctctttcagtgcattgtttctgtcttttttagctattatctcctccatcatatgacagttacttatttcaaggtgtttgaggttcataa 13506106  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  13506105 aactttcaaccaaagtaga 13506087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 13649964 - 13649846
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||| | |||||| ||||| |||| ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  13649964 aattatcatacctctttcaatgcattgtttctgtcttttttagctattatctcctccatcatatgacagttacttatttcaaggtgtttgaggttcataa 13649865  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  13649864 aactttcaaccaaagtaga 13649846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 13670462 - 13670344
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| | ||| ||||||||||||| ||||| | |||||| |||| ||    
T  13670462 aattaccatacctcttttactgcattatttctatcttctttagttattatatcctccattataagacaattacttatctcaaggtatttgagattcaaaa 13670363  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  13670362 aactttcaaccaaagtaga 13670344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 19138459 - 19138577
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||| | |||||| ||||| |||| ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  19138459 aattagcatacctctttcagtgcattgtttctgtcttttttagctattatctcctccatcatatgacagttacttatttcaaggtgtttgaggttcataa 19138558  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  19138559 aactttcaaccaaagtaga 19138577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 13610273 - 13610159
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||| | |||||| ||||| || | ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  13610273 aattagcatacctctttcagtgcattgtttctgtcctttttagctattatctcctccatcatatgacagttacttatttcaaggtgtttgaggttcataa 13610174  T
Q  106 aactttcaaccaaag 120  Q
    |||||||||||||||    
T  13610173 aactttcaaccaaag 13610159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 13684717 - 13684603
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||| | |||||| ||||  || | ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  13684717 aattagcatacctctttcagtgcattgtttcagtcatttttagctattatctcctccatcatatgacagttacttatttcaaggtgtttgaggttcataa 13684618  T
Q  106 aactttcaaccaaag 120  Q
    |||||||||||||||    
T  13684617 aactttcaaccaaag 13684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 16468662 - 16468780
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||| | |||||   || | ||||||||||| |||||||| ||| |||  ||||||||||| |||||||| ||||  |||||| |||    
T  16468662 aattaccatacctctttcaatgcatcgcttatctcttctttagcaattatctcttccatcaacggacaattactaatttcaaggtgttgaaggttcttaa 16468761  T
Q  106 aactttcaaccaaagtaga 124  Q
    ||||| |||||| ||||||    
T  16468762 aacttccaaccacagtaga 16468780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 19345013 - 19345089
Alignment:
Q  42 ttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataaaactttcaacca 117  Q
    |||| |||||||||||||| || ||| || ||| ||||| ||||||||| |||||||||| ||||||||| ||||||    
T  19345013 ttctgtagctattatctccaccatcaaagaacatttactaatttcaagtcgtttgaggtttataaaacttccaacca 19345089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 16497304 - 16497355
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatct 58  Q
    ||||| || |||||||| | |||||| ||||| |||||||||||||||||||    
T  16497304 aattagcatacctctttcaatgcattgtttctctcttctttagctattatct 16497355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 4e-42; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 38057986 - 38058104
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||| | |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  38057986 aattaccatacctctttcaatgcattatttctgtcttttttagctattatctcctccatcataggacaattacttatttcaaggtgtttgaggttcataa 38058085  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  38058086 aactttcaaccaaagtaga 38058104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 83; Significance: 9e-40; HSPs: 6)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 144834 - 144716
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||||| |||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  144834 aattaccatacctcttttaatgcattatttctctcctttttagctattatctcctccatcataggacaattacttatttcaaggtgtttgaggttcataa 144735  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||| ||||||||||||    
T  144734 aacttttaaccaaagtaga 144716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 56887 - 56769
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||| | |||||| ||||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  56887 aattaccatacctctttcaatgcattgtttctgtcttctttagctataatctcttccatcataggacaattacttatttcaaggtgtttgaggttcataa 56788  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  56787 aactttcaaccaaagtaga 56769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 139756 - 139638
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||| | |||||| ||||| |||| ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  139756 aattagcatacctctttcagtgcattgtttctgtcttttttagctattatctcctccatcatatgacagttacttatttcaaggtgtttgaggttcataa 139657  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  139656 aactttcaaccaaagtaga 139638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 168076 - 167958
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||| | ||| ||||||||||||| ||||| | |||||| |||| ||    
T  168076 aattaccatacctcttttactgcattatttctatcttctttagttattatatcctccattataagacaattacttatctcaaggtatttgagattcaaaa 167977  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  167976 aactttcaaccaaagtaga 167958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 218675 - 218554
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||| | |||||| ||||  || | ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  218675 aattatcatacctctttcagtgcattgtttccgtcatttttagctattatctcctccatcatatgacagttacttatttcaaggtgtttgaggttcataa 218576  T
Q  106 aactttcaaccaaagtagatga 127  Q
    ||||||||||||||| ||||||    
T  218575 aactttcaaccaaagaagatga 218554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #6
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 109797 - 109714
Alignment:
Q  45 tttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataaaactttcaaccaaagtagatga 127  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  109797 tttagctattatctcctccatcatatgacaattacttatttcaaggtgtctgaggttcataaaactttcaaccaaagaagatga 109714  T

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Target: scaffold0069 (Bit Score: 82; Significance: 4e-39; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 26349 - 26244
Alignment:
Q  16 acctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataaaactttcaa 114  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26349 acctcttttactgcattatttctatcttctttagttattatatcctccatgataggacaattacttatttcaagatgtttgaggttcataaaactttcaa 26250  T
Q  115 ccaaag 120  Q
    ||||||    
T  26249 ccaaag 26244  T

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Target: chr6 (Bit Score: 79; Significance: 2e-37; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 21814341 - 21814223
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||| |||||||||||||||||| |||  ||||||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  21814341 aattaccatacctattttactgcattatttctctctgttttagctataatctcctccatgataggacaattacttatttcaagatgtttgaggttcataa 21814242  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  21814241 aactttcaaccaaagtaga 21814223  T

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Target: chr6; HSP #2
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22284217 - 22284326
Alignment:
Q  16 acctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataaaactttcaa 114  Q
    |||||||| | |||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22284217 acctctttcaatgcattgtttctgtcttttttagctattatctcctccatcataggacaattacttatttcaaggtgtttgaggttcataaaactttcaa 22284316  T
Q  115 ccaaagtaga 124  Q
    ||||||||||    
T  22284317 ccaaagtaga 22284326  T

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Target: chr8 (Bit Score: 75; Significance: 6e-35; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 20814967 - 20815085
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    |||||||| |||| |||| ||||||||||||| |||  ||||||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  20814967 aattaccataccttttttcctgcattatttctctctgttttagctataatctcctccatgataggacaattacttatttcaagatgtttgaggttcataa 20815066  T
Q  106 aactttcaaccaaagtaga 124  Q
    |||||||||||||||||||    
T  20815067 aactttcaaccaaagtaga 20815085  T

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Target: scaffold0406 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 7971 - 8085
Alignment:
Q  7 aattaccacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataa 105  Q
    ||||| || |||||||| | |||||| ||||  || | ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  7971 aattatcatacctctttcagtgcattgtttccgtcatttttagctattatctcctccatcatatgacagttacttatttcaaggtgtttgaggttcataa 8070  T
Q  106 aactttcaaccaaag 120  Q
    |||||||||||||||    
T  8071 aactttcaaccaaag 8085  T

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Target: scaffold0068 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 41141 - 41255
Alignment:
Q  11 accacacctcttttactgcattatttctatcttctttagctattatctcctcc-tcataggacaattacttatttcaagttgtttgaggttcataaaact 109  Q
    |||| |||||||| | |||||  ||||| || | |||||||||||| |||||| ||||| |||| |||||||||||||| ||||||||||||||||||||    
T  41141 accatacctctttcaatgcatggtttctctcctttttagctattatttcctccatcatatgacagttacttatttcaaggtgtttgaggttcataaaact 41240  T
Q  110 ttcaaccaaagtaga 124  Q
    |||||||||||||||    
T  41241 ttcaaccaaagtaga 41255  T

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