View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5682-28 (Length: 125)
Name: Solexa-NF5682-28
Description: NF5682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5682-28 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 101; Significance: 2e-50; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 12885145 - 12885024
Alignment:
| Q |
8 |
ggttcgtgatcaataagttcattaaggtgtataaataaaataattcttcaacatagt----tcgagtcgtcattgaggagaatggagttgaggatgtcat |
103 |
Q |
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| T |
12885145 |
ggttcgtgatcaataagttcattaaggtgtataaataaaataattcttcaacatagttcagtcgagtcgtcattgaggagaatggagttgaggatgtcat |
12885046 |
T |
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| Q |
104 |
gtgtgagaatggcgtatactag |
125 |
Q |
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| T |
12885045 |
gtgtaagaatggcgtatactag |
12885024 |
T |
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