View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5682-7 (Length: 177)
Name: Solexa-NF5682-7
Description: NF5682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5682-7 |
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Alignment Details
Target: chr7 (Bit Score: 117; Significance: 7e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 7e-60
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 31693913 - 31693769
Alignment:
| Q |
10 |
acatgtggtaatc-tatttatttatgcttataaattggaaggatgtatgtttgtttgtcattgcattagatcaacaatttccttgatgaaggagcctcat |
108 |
Q |
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| T |
31693913 |
acatgtggtaatcatgtttatttatgcttataaattggaaggatatatgtttgtttgtcattgcattagatcaacaatttccttgatgaaggagcctcat |
31693814 |
T |
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| Q |
109 |
tgtcgccacttccaggaaatttcttatttatagaacaaatcaaac |
153 |
Q |
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| T |
31693813 |
tgtctccacttccacgaaatttctcatttatagaacaaatcaaac |
31693769 |
T |
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