View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5684-2 (Length: 126)
Name: Solexa-NF5684-2
Description: NF5684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5684-2 |
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Alignment Details
Target: chr5 (Bit Score: 91; Significance: 2e-44; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 6506989 - 6507083
Alignment:
| Q |
10 |
aaatttcaaaatacagataggtagtagaaaatgttacacacatgaattgttaattaagcaaattaattaagtgataaagcttcaacaatggatcg |
104 |
Q |
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| T |
6506989 |
aaatttcaaaatacagataggtagtagaaaatgttacacacatgaattgttaattaagcaaattaattaagagataaagcttcaacaatggatcg |
6507083 |
T |
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