View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5684-30 (Length: 136)
Name: Solexa-NF5684-30
Description: NF5684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5684-30 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 130; Significance: 9e-68; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 130; E-Value: 9e-68
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 2360558 - 2360687
Alignment:
| Q |
7 |
agcatgaagcaaccatattactagtacattacattaacaaataccacaaacaatttaaaagaaaaataaattaattagtgcttaatacattctcgccggt |
106 |
Q |
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| T |
2360558 |
agcatgaagcaaccatattactagtacattacattaacaaataccacaaacaatttaaaagaaaaataaattaattagtgcttaatacattctcgccggt |
2360657 |
T |
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| Q |
107 |
acaaaatttgcctgttaagaaggcaacaca |
136 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
2360658 |
acaaaatttgcctgttaagaaggcaacaca |
2360687 |
T |
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