View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5684-33 (Length: 127)
Name: Solexa-NF5684-33
Description: NF5684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5684-33 |
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Alignment Details
Target: chr1 (Bit Score: 87; Significance: 4e-42; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 47077279 - 47077373
Alignment:
| Q |
7 |
ataatataggtaaattagaaaaatatgtgactagcttggtctattatttttccaattgagtaacaaatttactacaaacaaaatcatccatacta |
101 |
Q |
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| T |
47077279 |
ataatataggtaaattggaaaaatatgtgactagcttggtctattatttttccaattcagtaacaaatttactacaaacaaaatcatccatacta |
47077373 |
T |
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