View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5700-7 (Length: 174)
Name: Solexa-NF5700-7
Description: NF5700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5700-7 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 6e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 6e-91
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 30189615 - 30189783
Alignment:
| Q |
2 |
ggatgaagcgcgtgcacactttgaaagagttgcaaatatggaggagcctgaagatcccgctagcaaacgctattattttgatggtttgctgctgcttgcc |
101 |
Q |
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| T |
30189615 |
ggatgaagcgcgtgcacactttgaaagagttgcaaatatggaggagcctgaagatcccgctagcaaacgctattattttgatggtttgctgctgcttgcc |
30189714 |
T |
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| Q |
102 |
aggtacaacttggttaaataccttaattagtgttcaaactttccttttcttattttcattttgctcatg |
170 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30189715 |
aggtacaacttggttaaataccttaattagtgttcaaactttccttttcttattttcattttgctcatg |
30189783 |
T |
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