View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5704-34 (Length: 228)

Name: Solexa-NF5704-34
Description: NF5704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5704-34
Solexa-NF5704-34
[»] chr1 (55 HSPs)
chr1 (1-228)||(44685405-44685628)
chr1 (68-185)||(22077545-22077661)
chr1 (68-184)||(41156984-41157099)
chr1 (68-185)||(66137-66255)
chr1 (75-184)||(66529-66637)
chr1 (68-184)||(17294570-17294685)
chr1 (68-184)||(24600364-24600479)
chr1 (68-184)||(26661572-26661687)
chr1 (69-184)||(5320016-5320130)
chr1 (75-177)||(44290882-44290983)
chr1 (68-176)||(3550721-3550828)
chr1 (68-184)||(34364918-34365033)
chr1 (82-184)||(41142365-41142466)
chr1 (82-184)||(41184489-41184590)
chr1 (75-177)||(44290515-44290616)
chr1 (79-184)||(24132046-24132150)
chr1 (68-177)||(32594766-32594874)
chr1 (67-184)||(34364500-34364616)
chr1 (68-184)||(39066250-39066365)
chr1 (68-184)||(40082400-40082514)
chr1 (68-184)||(41157368-41157483)
chr1 (70-185)||(30630690-30630804)
chr1 (68-182)||(22077879-22077991)
chr1 (66-184)||(31767209-31767326)
chr1 (99-184)||(21378122-21378206)
chr1 (68-184)||(37556104-37556219)
chr1 (68-184)||(1188638-1188753)
chr1 (68-184)||(26661948-26662063)
chr1 (99-177)||(3537228-3537305)
chr1 (26-172)||(3537607-3537752)
chr1 (82-184)||(3875395-3875496)
chr1 (66-185)||(22077158-22077288)
chr1 (68-174)||(50052073-50052178)
chr1 (87-184)||(29798192-29798288)
chr1 (101-181)||(45084378-45084457)
chr1 (66-184)||(22793271-22793389)
chr1 (70-177)||(48588540-48588646)
chr1 (99-184)||(37850681-37850765)
chr1 (68-177)||(41759483-41759591)
chr1 (26-184)||(5575099-5575252)
chr1 (67-184)||(9955900-9956018)
chr1 (50-185)||(19283487-19283621)
chr1 (56-150)||(4956218-4956311)
chr1 (67-181)||(11977276-11977389)
chr1 (69-184)||(38804406-38804520)
chr1 (70-184)||(34649431-34649544)
chr1 (68-169)||(14318875-14318975)
chr1 (131-184)||(35154151-35154204)
chr1 (51-104)||(47380200-47380253)
chr1 (75-184)||(45839620-45839732)
chr1 (106-184)||(37555723-37555800)
chr1 (131-185)||(50469193-50469247)
chr1 (75-167)||(5528811-5528902)
chr1 (138-177)||(47379904-47379943)
chr1 (145-177)||(50051777-50051809)
[»] chr6 (41 HSPs)
chr6 (68-185)||(10074413-10074529)
chr6 (68-185)||(10074041-10074157)
chr6 (68-177)||(3409259-3409367)
chr6 (52-172)||(32460614-32460733)
chr6 (68-177)||(14748388-14748496)
chr6 (68-177)||(29518503-29518611)
chr6 (68-177)||(29518920-29519028)
chr6 (68-177)||(32741179-32741287)
chr6 (68-184)||(2377747-2377862)
chr6 (68-185)||(10073666-10073780)
chr6 (75-184)||(2579929-2580037)
chr6 (68-177)||(35210204-35210312)
chr6 (68-184)||(16107671-16107786)
chr6 (82-177)||(2378126-2378220)
chr6 (26-177)||(3058226-3058376)
chr6 (82-184)||(10911558-10911660)
chr6 (24-185)||(2579498-2579658)
chr6 (68-184)||(2578493-2578607)
chr6 (68-178)||(593759-593868)
chr6 (26-184)||(16454900-16455057)
chr6 (67-177)||(26544049-26544158)
chr6 (68-185)||(2578885-2579000)
chr6 (87-184)||(16108056-16108152)
chr6 (68-171)||(9062400-9062501)
chr6 (68-174)||(6999846-6999951)
chr6 (26-184)||(16454568-16454725)
chr6 (68-177)||(1127360-1127468)
chr6 (68-173)||(3415462-3415566)
chr6 (87-184)||(6071125-6071221)
chr6 (82-185)||(12092546-12092648)
chr6 (68-177)||(1846748-1846856)
chr6 (68-184)||(2843547-2843663)
chr6 (68-177)||(3409660-3409768)
chr6 (66-174)||(1950233-1950340)
chr6 (100-184)||(5832108-5832191)
chr6 (82-180)||(5958667-5958764)
chr6 (68-184)||(8481920-8482034)
chr6 (93-173)||(17135144-17135223)
chr6 (116-184)||(2579203-2579270)
chr6 (154-184)||(7588359-7588389)
chr6 (138-184)||(33605647-33605693)
[»] chr7 (49 HSPs)
chr7 (6-184)||(1085604-1085781)
chr7 (6-184)||(7517573-7517750)
chr7 (67-184)||(45434629-45434745)
chr7 (68-184)||(7554018-7554133)
chr7 (68-184)||(8128491-8128606)
chr7 (68-184)||(22566712-22566827)
chr7 (68-184)||(30244263-30244378)
chr7 (68-184)||(30245070-30245185)
chr7 (82-184)||(16569189-16569290)
chr7 (82-184)||(16596372-16596473)
chr7 (75-177)||(37533067-37533168)
chr7 (88-185)||(28301613-28301709)
chr7 (68-184)||(23427-23542)
chr7 (68-184)||(24177428-24177543)
chr7 (68-184)||(118351-118466)
chr7 (68-184)||(22567089-22567203)
chr7 (68-184)||(36939783-36939898)
chr7 (68-184)||(1085298-1085414)
chr7 (68-177)||(29157565-29157673)
chr7 (27-184)||(40094783-40094939)
chr7 (68-175)||(6054562-6054668)
chr7 (75-174)||(20599317-20599415)
chr7 (82-184)||(43241488-43241589)
chr7 (87-184)||(41910663-41910759)
chr7 (68-184)||(34218084-34218199)
chr7 (109-184)||(30245487-30245561)
chr7 (109-184)||(30255332-30255406)
chr7 (75-182)||(40230348-40230454)
chr7 (5-184)||(45433234-45433412)
chr7 (68-170)||(11845198-11845299)
chr7 (106-184)||(30244694-30244771)
chr7 (68-177)||(14681510-14681618)
chr7 (108-184)||(36109007-36109082)
chr7 (68-184)||(45754709-45754823)
chr7 (26-172)||(30032572-30032717)
chr7 (76-182)||(36622955-36623060)
chr7 (68-174)||(37533414-37533519)
chr7 (68-169)||(19122740-19122839)
chr7 (99-184)||(36534865-36534949)
chr7 (68-184)||(4124138-4124253)
chr7 (58-182)||(41854630-41854752)
chr7 (76-184)||(47129088-47129195)
chr7 (68-131)||(30253537-30253600)
chr7 (66-184)||(24838749-24838867)
chr7 (68-174)||(9901648-9901751)
chr7 (134-184)||(36967344-36967394)
chr7 (131-185)||(40094506-40094560)
chr7 (136-184)||(37393057-37393105)
chr7 (138-187)||(37345551-37345600)
[»] chr4 (70 HSPs)
chr4 (75-185)||(3244506-3244615)
chr4 (68-185)||(36629229-36629345)
chr4 (79-184)||(49076507-49076611)
chr4 (69-177)||(41370357-41370464)
chr4 (67-184)||(16888863-16888980)
chr4 (68-184)||(4955365-4955480)
chr4 (49-184)||(2740693-2740827)
chr4 (82-184)||(52884880-52884981)
chr4 (68-185)||(2741063-2741179)
chr4 (68-184)||(52884688-52884804)
chr4 (68-177)||(55933172-55933280)
chr4 (68-184)||(25483329-25483444)
chr4 (68-184)||(34646697-34646812)
chr4 (68-184)||(39792908-39793023)
chr4 (26-184)||(32941129-32941286)
chr4 (26-182)||(3340802-3340957)
chr4 (68-184)||(10245913-10246027)
chr4 (69-184)||(54741227-54741341)
chr4 (75-184)||(16889591-16889700)
chr4 (27-177)||(50630762-50630911)
chr4 (68-185)||(54108907-54109020)
chr4 (75-184)||(22028016-22028124)
chr4 (67-180)||(54017642-54017754)
chr4 (68-184)||(1731695-1731810)
chr4 (29-184)||(3341121-3341275)
chr4 (26-184)||(22183270-22183427)
chr4 (82-184)||(41707526-41707627)
chr4 (75-177)||(49880160-49880261)
chr4 (75-184)||(51768115-51768223)
chr4 (68-184)||(36608709-36608824)
chr4 (68-184)||(50002419-50002534)
chr4 (68-184)||(22028417-22028534)
chr4 (77-184)||(36572012-36572118)
chr4 (68-183)||(44620654-44620767)
chr4 (82-184)||(39404391-39404492)
chr4 (68-162)||(45496820-45496913)
chr4 (68-179)||(49302902-49303014)
chr4 (87-172)||(760194-760278)
chr4 (68-185)||(28034221-28034337)
chr4 (26-182)||(39404013-39404168)
chr4 (68-184)||(54936193-54936304)
chr4 (66-184)||(4390147-4390264)
chr4 (68-126)||(31691202-31691260)
chr4 (28-182)||(34004593-34004744)
chr4 (107-184)||(3700358-3700434)
chr4 (87-184)||(10246340-10246436)
chr4 (67-168)||(44620362-44620462)
chr4 (26-183)||(49076837-49076992)
chr4 (68-184)||(20825829-20825944)
chr4 (68-168)||(44621011-44621110)
chr4 (68-184)||(54017750-54017867)
chr4 (68-177)||(54108538-54108645)
chr4 (68-184)||(43174499-43174615)
chr4 (110-183)||(44621420-44621492)
chr4 (106-167)||(54343087-54343147)
chr4 (68-152)||(18932797-18932880)
chr4 (87-171)||(20826223-20826306)
chr4 (110-184)||(44620289-44620362)
chr4 (131-184)||(12197371-12197424)
chr4 (135-184)||(19504698-19504747)
chr4 (66-179)||(23556912-23557024)
chr4 (136-184)||(11706636-11706684)
chr4 (94-174)||(50459724-50459803)
chr4 (107-177)||(6975543-6975612)
chr4 (69-183)||(15841034-15841146)
chr4 (68-122)||(23817729-23817783)
chr4 (131-177)||(50788093-50788139)
chr4 (131-184)||(45050594-45050647)
chr4 (66-130)||(18879852-18879916)
chr4 (80-124)||(43827492-43827536)
[»] chr5 (50 HSPs)
chr5 (6-175)||(18603108-18603276)
chr5 (68-182)||(26074607-26074720)
chr5 (26-184)||(36568577-36568732)
chr5 (68-185)||(26074196-26074312)
chr5 (68-181)||(40296365-40296477)
chr5 (68-185)||(41632774-41632890)
chr5 (68-184)||(299482-299597)
chr5 (68-184)||(6224189-6224304)
chr5 (68-184)||(13415810-13415925)
chr5 (68-184)||(36492267-36492382)
chr5 (26-185)||(1028525-1028683)
chr5 (66-177)||(32487394-32487503)
chr5 (75-184)||(26075219-26075327)
chr5 (68-171)||(41170640-41170742)
chr5 (26-184)||(34753033-34753190)
chr5 (6-172)||(38427553-38427717)
chr5 (68-177)||(6500451-6500558)
chr5 (68-177)||(9498704-9498812)
chr5 (24-177)||(26590916-26591068)
chr5 (68-184)||(15370092-15370207)
chr5 (26-177)||(6500823-6500972)
chr5 (67-184)||(11417026-11417140)
chr5 (68-182)||(35150002-35150114)
chr5 (76-181)||(3295073-3295176)
chr5 (68-184)||(25327928-25328043)
chr5 (26-177)||(624196-624346)
chr5 (89-184)||(31509616-31509710)
chr5 (82-184)||(3295408-3295508)
chr5 (87-177)||(27502105-27502194)
chr5 (82-184)||(42508605-42508706)
chr5 (27-184)||(12662661-12662817)
chr5 (75-184)||(26074839-26074947)
chr5 (99-175)||(26074320-26074395)
chr5 (57-185)||(36521935-36522062)
chr5 (68-184)||(42405646-42405761)
chr5 (87-185)||(24489275-24489370)
chr5 (68-177)||(29549305-29549413)
chr5 (87-165)||(33747783-33747860)
chr5 (69-174)||(2411010-2411114)
chr5 (110-182)||(300954-301025)
chr5 (46-177)||(623818-623948)
chr5 (138-184)||(36527202-36527248)
chr5 (136-185)||(13785727-13785775)
chr5 (26-131)||(15370447-15370552)
chr5 (135-184)||(35150740-35150789)
chr5 (135-184)||(35151031-35151080)
chr5 (105-184)||(39309677-39309755)
chr5 (101-175)||(7768852-7768925)
chr5 (134-175)||(42524719-42524760)
chr5 (145-177)||(5723917-5723949)
[»] chr2 (59 HSPs)
chr2 (68-185)||(28531364-28531480)
chr2 (68-184)||(28254287-28254402)
chr2 (26-184)||(15880256-15880413)
chr2 (26-184)||(36005888-36006044)
chr2 (68-177)||(41283525-41283633)
chr2 (68-184)||(962591-962706)
chr2 (46-185)||(40679657-40679795)
chr2 (26-185)||(42514641-42514799)
chr2 (68-177)||(36178655-36178763)
chr2 (68-177)||(14745717-14745825)
chr2 (68-177)||(37106188-37106296)
chr2 (68-184)||(6421378-6421493)
chr2 (68-177)||(5542675-5542783)
chr2 (87-184)||(16542442-16542538)
chr2 (68-177)||(37105924-37106032)
chr2 (67-184)||(31468799-31468911)
chr2 (88-184)||(31899496-31899591)
chr2 (57-184)||(33561490-33561616)
chr2 (99-184)||(38796299-38796383)
chr2 (75-184)||(38796677-38796785)
chr2 (68-184)||(30323457-30323572)
chr2 (70-182)||(35580776-35580886)
chr2 (68-184)||(37895111-37895226)
chr2 (101-180)||(7598606-7598684)
chr2 (68-182)||(40733512-40733625)
chr2 (68-177)||(5543048-5543156)
chr2 (75-180)||(7598225-7598329)
chr2 (68-184)||(37632647-37632762)
chr2 (82-184)||(12529092-12529193)
chr2 (50-184)||(30313171-30313303)
chr2 (95-180)||(1769889-1769973)
chr2 (69-177)||(36178320-36178427)
chr2 (66-185)||(33953819-33953937)
chr2 (87-182)||(37894761-37894855)
chr2 (82-184)||(6712969-6713070)
chr2 (75-161)||(28254169-28254254)
chr2 (50-184)||(29873569-29873702)
chr2 (68-177)||(14745344-14745452)
chr2 (68-184)||(15511545-15511658)
chr2 (131-184)||(36785675-36785728)
chr2 (108-184)||(29676896-29676971)
chr2 (106-166)||(40163461-40163520)
chr2 (69-184)||(9231242-9231356)
chr2 (138-184)||(33954380-33954426)
chr2 (68-182)||(40733878-40733990)
chr2 (67-185)||(23346227-23346345)
chr2 (68-181)||(29874073-29874185)
chr2 (75-172)||(33731653-33731749)
chr2 (68-184)||(5367448-5367563)
chr2 (69-184)||(12910221-12910335)
chr2 (68-159)||(36178221-36178311)
chr2 (114-185)||(42515004-42515078)
chr2 (131-184)||(6421297-6421350)
chr2 (68-161)||(6422126-6422218)
chr2 (82-184)||(16590881-16590977)
chr2 (140-184)||(43443103-43443147)
chr2 (145-184)||(3673078-3673117)
chr2 (68-184)||(31259666-31259784)
chr2 (89-169)||(29676543-29676622)
[»] chr8 (61 HSPs)
chr8 (76-184)||(9608738-9608845)
chr8 (26-184)||(3038298-3038455)
chr8 (26-184)||(8918772-8918929)
chr8 (82-184)||(41972151-41972252)
chr8 (68-181)||(34835205-34835317)
chr8 (68-184)||(9309348-9309463)
chr8 (6-177)||(3669687-3669857)
chr8 (62-184)||(25561859-25561981)
chr8 (68-184)||(147444-147559)
chr8 (66-182)||(40518577-40518692)
chr8 (68-179)||(45121960-45122070)
chr8 (68-182)||(45122107-45122220)
chr8 (23-184)||(34834869-34835029)
chr8 (68-181)||(34835470-34835583)
chr8 (68-181)||(34835736-34835849)
chr8 (68-177)||(1013921-1014029)
chr8 (68-177)||(3670060-3670168)
chr8 (68-185)||(4154716-4154832)
chr8 (68-184)||(6876912-6877028)
chr8 (26-182)||(1513923-1514078)
chr8 (68-184)||(30359264-30359379)
chr8 (68-184)||(33113417-33113532)
chr8 (82-184)||(5420644-5420745)
chr8 (68-177)||(1014295-1014403)
chr8 (82-173)||(43398132-43398225)
chr8 (87-184)||(9620745-9620841)
chr8 (66-170)||(70322-70425)
chr8 (68-177)||(30441081-30441193)
chr8 (68-184)||(40518062-40518179)
chr8 (68-175)||(40579556-40579662)
chr8 (87-184)||(4154350-4154445)
chr8 (106-179)||(18372787-18372859)
chr8 (68-184)||(5915865-5915975)
chr8 (90-170)||(9482676-9482755)
chr8 (68-152)||(9483237-9483320)
chr8 (68-184)||(9507770-9507890)
chr8 (68-184)||(30359602-30359717)
chr8 (76-152)||(45122649-45122724)
chr8 (68-167)||(18372044-18372142)
chr8 (99-170)||(41416252-41416322)
chr8 (90-185)||(9308969-9309065)
chr8 (91-173)||(18373004-18373085)
chr8 (26-184)||(37544498-37544655)
chr8 (26-184)||(45121664-45121820)
chr8 (131-181)||(45123002-45123052)
chr8 (135-184)||(147822-147871)
chr8 (106-179)||(18372344-18372416)
chr8 (131-177)||(6731904-6731950)
chr8 (6-177)||(20870561-20870733)
chr8 (107-184)||(8794104-8794180)
chr8 (68-173)||(18380067-18380171)
chr8 (110-167)||(25561736-25561792)
chr8 (99-184)||(33831971-33832055)
chr8 (68-148)||(9609114-9609193)
chr8 (91-175)||(18372676-18372758)
chr8 (144-184)||(18645712-18645752)
chr8 (68-184)||(43274829-43274944)
chr8 (133-179)||(18372485-18372531)
chr8 (138-184)||(20995520-20995566)
chr8 (135-183)||(12283867-12283915)
chr8 (87-151)||(32305503-32305566)
[»] chr3 (61 HSPs)
chr3 (68-184)||(12114612-12114727)
chr3 (70-185)||(21832395-21832509)
chr3 (26-180)||(15772851-15773004)
chr3 (26-184)||(25739433-25739590)
chr3 (68-184)||(35946515-35946630)
chr3 (68-184)||(43346841-43346956)
chr3 (26-184)||(29644910-29645067)
chr3 (26-184)||(33803260-33803417)
chr3 (67-184)||(15773185-15773301)
chr3 (68-177)||(22304569-22304677)
chr3 (7-184)||(42342377-42342553)
chr3 (68-184)||(32462950-32463066)
chr3 (68-184)||(37990689-37990804)
chr3 (68-184)||(37991027-37991142)
chr3 (70-181)||(1634366-1634477)
chr3 (68-182)||(29644631-29644744)
chr3 (66-184)||(52634669-52634785)
chr3 (68-184)||(33175711-33175829)
chr3 (27-184)||(41359774-41359926)
chr3 (68-184)||(45901706-45901822)
chr3 (68-184)||(49336737-49336852)
chr3 (23-168)||(39934960-39935104)
chr3 (68-184)||(8327897-8328012)
chr3 (68-184)||(54017866-54017981)
chr3 (87-185)||(9240141-9240238)
chr3 (70-184)||(32589697-32589809)
chr3 (26-184)||(42342098-42342255)
chr3 (68-177)||(39389070-39389178)
chr3 (24-184)||(25755387-25755546)
chr3 (106-184)||(31190010-31190087)
chr3 (46-184)||(45395681-45395818)
chr3 (68-177)||(4823655-4823763)
chr3 (69-182)||(39336280-39336392)
chr3 (108-184)||(53118064-53118139)
chr3 (68-184)||(54018248-54018363)
chr3 (50-185)||(47964550-47964684)
chr3 (87-181)||(7767383-7767476)
chr3 (138-184)||(12747871-12747917)
chr3 (107-177)||(50612541-50612610)
chr3 (99-184)||(39914245-39914329)
chr3 (92-177)||(51886561-51886645)
chr3 (68-184)||(32462608-32462724)
chr3 (68-184)||(53577357-53577472)
chr3 (69-180)||(3384317-3384427)
chr3 (68-184)||(22304005-22304113)
chr3 (108-177)||(37726504-37726572)
chr3 (131-184)||(43346643-43346696)
chr3 (99-167)||(42584903-42584970)
chr3 (68-170)||(3135123-3135224)
chr3 (131-177)||(22304246-22304292)
chr3 (87-183)||(33362362-33362460)
chr3 (67-184)||(46546374-46546490)
chr3 (68-125)||(52634991-52635048)
chr3 (109-181)||(11661531-11661602)
chr3 (140-184)||(33809129-33809173)
chr3 (138-184)||(2299969-2300015)
chr3 (68-118)||(22303709-22303759)
chr3 (138-184)||(25317492-25317538)
chr3 (110-172)||(36986040-36986101)
chr3 (110-172)||(37011479-37011540)
chr3 (138-184)||(47965034-47965080)
[»] scaffold0078 (2 HSPs)
scaffold0078 (87-184)||(5350-5446)
scaffold0078 (68-184)||(4975-5090)
[»] scaffold0734 (2 HSPs)
scaffold0734 (87-184)||(5770-5866)
scaffold0734 (82-184)||(5389-5490)
[»] scaffold0702 (2 HSPs)
scaffold0702 (68-184)||(564-679)
scaffold0702 (105-177)||(229-300)
[»] scaffold0171 (1 HSPs)
scaffold0171 (82-184)||(17520-17621)
[»] scaffold0391 (3 HSPs)
scaffold0391 (75-184)||(1163-1271)
scaffold0391 (131-184)||(3097-3150)
scaffold0391 (68-125)||(1741-1798)
[»] scaffold0027 (1 HSPs)
scaffold0027 (75-181)||(47356-47461)
[»] scaffold0113 (1 HSPs)
scaffold0113 (138-184)||(39831-39877)
[»] scaffold0504 (1 HSPs)
scaffold0504 (99-184)||(10192-10276)


Alignment Details
Target: chr1 (Bit Score: 180; Significance: 2e-97; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 44685628 - 44685405
Alignment:
Q  1 gcacagaggggagccaggagggtcatccacatcgaggttaaaattacccc-acaagagagaaagatgtcacactgttaccccaaactttaaggcaatgag 99  Q
    |||||||||||||||||||||||||    ||||||||||| || |||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  44685628 gcacagaggggagccaggagggtca----catcgaggttagaactacccccacaagagagaaagacgtcacactgttaccc-aaacattaaggcaatgag 44685534  T
Q  100 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacacgtttgtgtgtgata 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44685533 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacacgtttgtgtgtgata 44685434  T
Q  200 ggaaaatactacgtatgtacaccaaaatg 228  Q
    |||||||||||||||||||||||||||||    
T  44685433 ggaaaatactacgtatgtacaccaaaatg 44685405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 22077545 - 22077661
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||| | |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||    
T  22077545 cacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataact 22077643  T
Q  168 cacacttgcacacaacac 185  Q
    ||||||||||||||||||    
T  22077644 cacacttgcacacaacac 22077661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 41157099 - 41156984
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||| ||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||||| |||||||||||||| |    
T  41157099 cacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgttatgggacatataatt 41157001  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  41157000 cacacttgcacacaaca 41156984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 66137 - 66255
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat-ataac 166  Q
    |||||| |||||| |||| ||||||| ||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| || ||    
T  66137 cacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacatgattac 66236  T
Q  167 tcacacttgcacacaacac 185  Q
    |||||||||||||||||||    
T  66237 tcacacttgcacacaacac 66255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 66529 - 66637
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||||| ||  |||||| | |||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  66529 ttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaa-cctttacttttctatccgatatggaacatataactcacactt 66627  T
Q  175 gcacacaaca 184  Q
    ||||||||||    
T  66628 gcacacaaca 66637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 17294685 - 17294570
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| ||||||||||||||    
T  17294685 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaa-cctttactcttttatccgatgtgggacatataact 17294587  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  17294586 cacacttgtacacaaca 17294570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 24600364 - 24600479
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| | |||| ||||| ||||||||||||  || |||||||||||||  | ||||| |||||||||||||||||||||||||||||||||||    
T  24600364 cacactcttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaa-cctttacttttctatccgatatgggacatataact 24600462  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  24600463 cacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 26661572 - 26661687
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| |||||||| ||||||||||| ||| |||||||||| || || ||||| ||||||||||||||    
T  26661572 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttc-aacctttactcttttacccgatgtgggacatataact 26661670  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  26661671 cacacttgtacacaaca 26661687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 5320016 - 5320130
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| |||||| |||| ||||||| |||||||||| |||||||| ||||||||||| ||||| | |||||||||||||||||| ||| |||||||||||    
T  5320016 acactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaa-cttttacttttctatccgatgtggaacatataactc 5320114  T
Q  169 acacttgcacacaaca 184  Q
    ||||||||| ||||||    
T  5320115 acacttgcatacaaca 5320130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 44290882 - 44290983
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||||||||||||||    
T  44290882 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataactcacactt 44290980  T
Q  175 gca 177  Q
    |||    
T  44290981 gca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 3550828 - 3550721
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||||||||||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || |||| ||| ||||||||||||||    
T  3550828 cacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataact 3550730  T
Q  168 cacacttgc 176  Q
    |||||||||    
T  3550729 cacacttgc 3550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 34365033 - 34364918
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||| ||| |||||| |||||||||||||||||||| ||| |||||||| | || |||||||| || |||||||||||    
T  34365033 cacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttc-aacctttattattttatccgatgtgtgacatataact 34364935  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  34364934 cacacttgcacacaaca 34364918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 41142466 - 41142365
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||| |||||| |||||| ||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||||||||| |    
T  41142466 aaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataactcacacttgcacaga 41142368  T
Q  182 aca 184  Q
    |||    
T  41142367 aca 41142365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 41184489 - 41184590
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||| |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| || |||||||||||||||||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaa-cctttactattttatccgatgtgagacatataactcacacttgcacaca 41184587  T
Q  182 aca 184  Q
    |||    
T  41184588 aca 41184590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 44290515 - 44290616
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||||||||| |||||| |||||||||||||||||| | ||||| |||||||| || |||||||| |||||||||||||||||||||    
T  44290515 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataactcacactt 44290613  T
Q  175 gca 177  Q
    |||    
T  44290614 gca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 24132046 - 24132150
Alignment:
Q  79 cccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcac 178  Q
    ||||||| |||||||||||||||||| | ||| |||| ||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||| |||||     
T  24132046 cccaaaccttaaggcaatgagtttatggatccccttatttataaggtgttcaa-cctttacttttctatccgatgagggacatataactcacagttgcat 24132144  T
Q  179 acaaca 184  Q
    ||||||    
T  24132145 acaaca 24132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 32594766 - 32594874
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| | ||||||||||||    
T  32594766 cacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtaggacatataact 32594864  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  32594865 cacacttgca 32594874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 34364616 - 34364500
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||||| |||| ||||||| ||| |||||  | |||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||    
T  34364616 tcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgagacatataac 34364518  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||||||||||||||||    
T  34364517 tcacacttgcacacaaca 34364500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 39066250 - 39066365
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| ||||| |||||| ||||| |||| ||||| ||||||||| ||||| |||||||||||||||||||| ||| | ||||||||    
T  39066250 cacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaa-cctttacttttctatccgatgtggaatatataact 39066348  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  39066349 cacacttgcacacaaca 39066365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 40082514 - 40082400
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||| ||||| | |||||||||||||||||| ||||| |||||||| || |||||||| | ||||||||||||    
T  40082514 cacactcttacccaaaaccttaaggcaatgaatttat-gatcctcttacttataaggtgttcaa-cctttactattttatccgatgtaggacatataact 40082417  T
Q  168 cacacttgcacacaaca 184  Q
    ||||||||| |||||||    
T  40082416 cacacttgcgcacaaca 40082400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 41157483 - 41157368
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| | |||| | ||||||||| |||||| |||||||||||||||||||| ||||| | |||||| || |||| ||| ||||||||||||||    
T  41157483 cacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaa-cttttactcttttatctgatgtgggacatataact 41157385  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  41157384 cacacttgcacacaaca 41157368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 30630690 - 30630804
Alignment:
Q  70 cactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 169  Q
    |||| |||||| |||||||||||||||| |||||| ||| ||||||||||||| || | |||||||||| |||| |||||||| || ||||||||| |||    
T  30630690 cactcttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgt-caaacctttaattttttatccgatgtgagacatataaatca 30630788  T
Q  170 cacttgcacacaacac 185  Q
    |||||||||| |||||    
T  30630789 cacttgcacataacac 30630804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 22077879 - 22077991
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||||||||||| ||| ||| |||||||||| |||||||||||||||||| | ||||| |||||| ||||||||||||| |   ||||||||||    
T  22077879 cacactcttaccccaaacctta-ggctatgagtttatgggtcctcttacttataagatgttcaa-cctttatttttctatccgatttaaaacatataact 22077976  T
Q  168 cacacttgcacacaa 182  Q
    |||||||||||||||    
T  22077977 cacacttgcacacaa 22077991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 31767209 - 31767326
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| |||||| |||| |||||||| |  ||| || |||||||||||||||||||| ||||| |||||||| || |||||||| ||| ||||||||    
T  31767209 gtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtggaacatataa 31767307  T
Q  166 ctcacacttgcacacaaca 184  Q
    | |||||||||||||||||    
T  31767308 cccacacttgcacacaaca 31767326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 21378122 - 21378206
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| |||||||||||||||||| | ||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  21378122 gtttatgggtcctcttacttataagatattcaa-cctttactgttctatccgatctgggacatataactgacacttgcacacaaca 21378206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 37556219 - 37556104
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttact-tttctatccgatatgggacatataac 166  Q
    |||||| |||||| |||| ||||||| ||| |||||| |||||||||||||||||| | ||||| |||||||| ||| |||||||| |||||||||||||    
T  37556219 cacactcttacccaaaaccttaaggctatgggtttat-ggtcctcttacttataagatgttcaa-cctttactatttttatccgatgtgggacatataac 37556122  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||||||| ||||||||    
T  37556121 tcacacttgtacacaaca 37556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 1188638 - 1188753
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||| |||||||||||||  ||| ||| ||||||||  | ||||| |||  ||||||||||||||||||| ||||||||||    
T  1188638 cacacttttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaa-cctccacttttctatccgatatggaacatataact 1188736  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  1188737 cacacttgcacacaaca 1188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 26661948 - 26662063
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||  |||||| |||| ||| ||||||||||| ||||| |||||||| || |||| ||||||||| ||||||||    
T  26661948 cacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaa-cctttactcttttatctgatatgggatatataact 26662046  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  26662047 cacacttgtacacaaca 26662063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 3537228 - 3537305
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacacttgca 3537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 3537607 - 3537752
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| ||| | |||||| |||||| |||| ||||| ||||| |||||| |||||||||||| |||||||    
T  3537607 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggt 3537706  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacac 172  Q
     ||| |||||||||| || |||||||| |||||||||||||| ||||    
T  3537707 gttc-aacctttactattttatccgatgtgggacatataactaacac 3537752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 3875395 - 3875496
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||| | ||| ||||||||||| |||||||| || ||||||||||| || ||||||||||    
T  3875395 aaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaa-cctttacttttttatccgatgtgtgacatataactgactcttgcacaca 3875493  T
Q  182 aca 184  Q
    |||    
T  3875494 aca 3875496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 22077158 - 22077288
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttactttt------------ctatccgata 153  Q
    |||||||| ||| || |||| ||| |||||||||||||| |||||||||||||||||||| ||||| |||||||||||            |||||||||     
T  22077158 gtcacactcttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaa-cctttacttttctatccgattttctatccgatg 22077256  T
Q  154 tgggacatataactcacacttgcacacaacac 185  Q
    ||||||||||||||||||||||||||||||||    
T  22077257 tgggacatataactcacacttgcacacaacac 22077288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 50052073 - 50052178
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| ||||||||||  |||  |||||| |||||||||||||||||| | ||||| |||||||| || |||||||| ||||||||||||||    
T  50052073 cacactcttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataact 50052171  T
Q  168 cacactt 174  Q
    |||||||    
T  50052172 cacactt 50052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 29798288 - 29798192
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||||| |||||||| || ||||| || | |||||||||||||||||||||| ||||||    
T  29798288 ttaaggcaatgggtttatgagtcctcttacttataaggtgttcaa-cctttactattttatccaatgtaggacatataactcacacttgcatacaaca 29798192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 45084457 - 45084378
Alignment:
Q  101 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| |||||||||||||||||||| ||||| |||||||| || |||||||| ||||| ||||||||||||||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 22793389 - 22793271
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaa-tgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 164  Q
    |||||||| |||| | ||||  |||||||| || |||||| | |||||| |||||||| |||||||| ||| ||||||||||| |||| |||||||||||    
T  22793389 gtcacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaagttttcaa-cctctacttttctatacgatgtgggacatata 22793291  T
Q  165 actcacacttgcacacaaca 184  Q
    |||||||||||| |||||||    
T  22793290 actcacacttgctcacaaca 22793271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 48588540 - 48588646
Alignment:
Q  70 cactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 169  Q
    |||| |||||| |||| |||||||||||| ||||  |||| ||||||||||||||| ||| |||||||||| || |||||||| | ||||||| ||||||    
T  48588540 cactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttc-aacctttactattttatccgatgtcggacatagaactca 48588638  T
Q  170 cacttgca 177  Q
    ||||||||    
T  48588639 cacttgca 48588646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 37850681 - 37850765
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| ||| |||||||||||||||| ||||| ||| |||| || ||| |||| |||||||||||||||||||||||||||||||    
T  37850681 gtttatgggttctcttacttataaggtgttcaa-cctctactgttttatgcgatgtgggacatataactcacacttgcacacaaca 37850765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 41759591 - 41759483
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||  ||||| | || ||||||||||||||| ||| ||| |||||| || |||||||| || |||||||||||    
T  41759591 cacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttc-aacttttactattttatccgatgtgtgacatataact 41759493  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  41759492 cacacttgca 41759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 5575252 - 5575099
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || || |||| || ||||||||  || | |||||| ||| || |||| |||| || |||  ||||| ||||||||||||||||||||    
T  5575252 tccacatcgaggctagaactacctcataagagaga--gacgccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggt 5575155  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||||| |||||||| ||||||||||  |||||||||||| |||||  |||||||||||    
T  5575154 gttcaa-cctttactcttctatccgacgtgggacatataattcaca--tgcacacaaca 5575099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 9956018 - 9955900
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattgg-tcctcttacttataaggttttcaaacctttacttttct-atccgatatgggacatata 164  Q
    ||||||| |||||| |||| ||||||||||  ||||| ||| ||||||||||||||| || ||||| ||||||||||| | ||| ||| |||||||||||    
T  9956018 tcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaa-cctttactttttttatctgatgtgggacatata 9955920  T
Q  165 actcacacttgcacacaaca 184  Q
    |||||||||  |||||||||    
T  9955919 actcacactaacacacaaca 9955900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 19283487 - 19283621
Alignment:
Q  50 cacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 149  Q
    |||||| |||| ||| | |||||| ||| || |||| ||||||| ||||||||||  ||||||| | ||| || ||  |||| |||  ||||||||||||    
T  19283487 cacaagtgagagagacgccacactcttatccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaa-cctccacttttctatcc 19283585  T
Q  150 gatatgggacatataactcacacttgcacacaacac 185  Q
    | | ||||||||||||||||||||||||||||||||    
T  19283586 ggtgtgggacatataactcacacttgcacacaacac 19283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 4956311 - 4956218
Alignment:
Q  56 agagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccg 150  Q
    ||||| ||| |||||||| |||||  ||||||||  ||||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||    
T  4956311 agagatagacgtcacacttttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttc-aacctttacttttctatccg 4956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 181
Target Start/End: Complemental strand, 11977389 - 11977276
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||||| |||| |||||||| |  ||||||  || |||||||||||||||| ||||| | |||||| || || ||||| |||||||||||||    
T  11977389 tcacactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaa-catttactgttttacccgatgtgggacatataac 11977291  T
Q  167 tcacacttgcacaca 181  Q
    ||||||||| |||||    
T  11977290 tcacacttgtacaca 11977276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 38804406 - 38804520
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| |||||| |||| ||||||  ||| |||||| | ||||||||||||||| || ||||| |||||||| || ||| |||| |||||| ||||||||    
T  38804406 acactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaa-cctttactcttttattcgatgtgggacgtataactc 38804504  T
Q  169 acacttgcacacaaca 184  Q
    ||||||| | ||||||    
T  38804505 acacttgtaaacaaca 38804520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 184
Target Start/End: Complemental strand, 34649544 - 34649431
Alignment:
Q  70 cactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 169  Q
    |||| |||||| |||| |||||||| |  |||||| ||| ||   ||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||    
T  34649544 cactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataactca 34649446  T
Q  170 cacttgcacacaaca 184  Q
    |||||| | ||||||    
T  34649445 cacttgtatacaaca 34649431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 14318975 - 14318875
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||   ||||| |||| ||||||||||||||| ||| |||||||||| || |||||||  ||| ||||||||||    
T  14318975 cacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttc-aacctttactattttatccgacgtggaacatataact 14318877  T
Q  168 ca 169  Q
    ||    
T  14318876 ca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 35154151 - 35154204
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| || |||| ||| |||||||||||||||||||||||||||||||    
T  35154151 aacctttactcttttatctgatgtgggacatataactcacacttgcacacaaca 35154204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 47380200 - 47380253
Alignment:
Q  51 acaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttat 104  Q
    ||||| |||| |||||||||||| |||||| |||||||||||||||||||||||    
T  47380200 acaagtgagagagatgtcacactcttacccaaaactttaaggcaatgagtttat 47380253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 45839732 - 45839620
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttc----aaacctttacttttctatccgatatgggacatataactcac 170  Q
    |||||| |||| |||||||| |   ||||| |||| ||||||||||||||| |||     |||||||| ||||||||||||| ||||||||||||||||     
T  45839732 ttacccaaaaccttaaggcattacatttatgggtcttcttacttataaggtgttcgattcaaccttta-ttttctatccgatgtgggacatataactcat 45839634  T
Q  171 acttgcacacaaca 184  Q
    ||||| ||||||||    
T  45839633 acttgtacacaaca 45839620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 37555800 - 37555723
Alignment:
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||| || ||||| |||| ||| || |||||||| |||||| ||||||||||||||  ||||||||    
T  37555800 ggtcctcttacttataatgtattcaa-ccttcactattttatccgatgtgggacttataactcacacttttacacaaca 37555723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 50469193 - 50469247
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
    ||||||||||||  |||| ||| | ||||||||||||||||||||||||||||||    
T  50469193 aacctttactttattatctgatgtaggacatataactcacacttgcacacaacac 50469247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 5528811 - 5528902
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| |||||  |||||||||||  ||||||||| ||||||| | ||| |||||||||| || |||||||| || |||||||||||    
T  5528811 ttacccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttc-aacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 47379904 - 47379943
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgca 177  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  47379904 acttttctatccgatgtgggatatataactcacacttgca 47379943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 50051777 - 50051809
Alignment:
Q  145 tatccgatatgggacatataactcacacttgca 177  Q
    |||||||| ||||||||||||||||||||||||    
T  50051777 tatccgatgtgggacatataactcacacttgca 50051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 10074413 - 10074529
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| |||||| | |||||    
T  10074413 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttacttttctatccgatgtgggacctctaact 10074511  T
Q  168 cacacttgcacacaacac 185  Q
    ||||||||||||||||||    
T  10074512 cacacttgcacacaacac 10074529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 10074041 - 10074157
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||||||||||||||| ||||| ||||||||    
T  10074041 cacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacgtttacttttctatccgatgtgggatatataact 10074139  T
Q  168 cacacttgcacacaacac 185  Q
    ||| ||||||||||||||    
T  10074140 cacccttgcacacaacac 10074157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 3409367 - 3409259
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| ||||||||||||||    
T  3409367 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataact 3409269  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  3409268 cacacttgca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 172
Target Start/End: Original strand, 32460614 - 32460733
Alignment:
Q  52 caagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccga 151  Q
    |||| ||||||||||||||||| |||||| |||| ||||||||||| ||||||  ||||||||||||||||||| ||| |||||||||| || ||| |||    
T  32460614 caagtgagaaagatgtcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttatacga 32460712  T
Q  152 tatgggacatataactcacac 172  Q
    | |||||||||||||||||||    
T  32460713 tgtgggacatataactcacac 32460733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 14748388 - 14748496
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||| ||||||||||||| |||||||||| ||||||||| ||| |||||||||| || |||||||| ||||||||||||||    
T  14748388 cacactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttc-aacctttactattttatccgatgtgggacatataact 14748486  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  14748487 cacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 29518611 - 29518503
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||| |||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||||||    
T  29518611 cacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataact 29518513  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  29518512 cacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 29519028 - 29518920
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||| |||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||||||    
T  29519028 cacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataact 29518930  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  29518929 cacacttgca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 32741287 - 32741179
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||| |||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||||||    
T  32741287 cacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataact 32741189  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  32741188 cacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 2377862 - 2377747
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || || ||||| ||||||||||||||    
T  2377862 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttaaccgatgtgggacatataact 2377764  T
Q  168 cacacttgcacacaaca 184  Q
    ||||||||  |||||||    
T  2377763 cacacttgtgcacaaca 2377747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 10073666 - 10073780
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  ||||| |||||||||||| | |||||||||||||||||| ||| ||||||||||||||  |||||| ||||||||||||||    
T  10073666 cacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttc-aacctttacttttc--tccgatgtgggacatataact 10073762  T
Q  168 cacacttgcacacaacac 185  Q
     |||||||||||||||||    
T  10073763 aacacttgcacacaacac 10073780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 2579929 - 2580037
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| |||||||  || |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| |||||||||||||||||||||    
T  2579929 ttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaa-cctttactcttttatccgatgtgggacatataactcacactt 2580027  T
Q  175 gcacacaaca 184  Q
    ||||||||||    
T  2580028 gcacacaaca 2580037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 35210312 - 35210204
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || |||||||||||    
T  35210312 cacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgagacatataact 35210214  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  35210213 cacacttgca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 16107786 - 16107671
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| ||||||  ||||||||||||||||||| || || ||||||||||| |||||||| ||  ||||||||||    
T  16107786 cacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaa-cctttacttttttatccgatgtgacacatataact 16107688  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  16107687 cacacttgtacacaaca 16107671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 2378220 - 2378126
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    |||| |||||| |||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||||||    
T  2378220 aaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacacttgca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 3058376 - 3058226
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    ||||||||||||||| ||  |||| |||||  ||| |||   |||||| |||||| |||| ||||||||||| |||||| | ||||| ||||||||||||    
T  3058376 tccacatcgaggttagaaccaccctacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggt 3058277  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
     ||| |||||||||| || |||||||| |||||||||||||| |||||||||    
T  3058276 gttc-aacctttactattttatccgatgtgggacatataactaacacttgca 3058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 10911660 - 10911558
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttac-ttttctatccgatatgggacatataactcacacttgcacac 180  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||| |||| |||| ||| | |||||||||||||||||||||| ||    
T  10911660 aaactttaaggcaatgagtttatgagtcctcttacttataaggtgttc-aacctttactttttttatctgatgtaggacatataactcacacttgcatac 10911562  T
Q  181 aaca 184  Q
    ||||    
T  10911561 aaca 10911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 185
Target Start/End: Original strand, 2579498 - 2579658
Alignment:
Q  24 catccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataag 123  Q
    ||||||||||||||||| ||  ||| ||||||  ||| |||   || ||| |||||| |||| |||||||||||||||||| || |||||||||||||||    
T  2579498 catccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttataag 2579597  T
Q  124 gttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
    | | ||  |||||||||||| | |||||| ||||||||||||||||||| |||  |||||||    
T  2579598 g-tatccgacctttacttttttgtccgatgtgggacatataactcacacctgctaacaacac 2579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 2578493 - 2578607
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||| ||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||| | ||||||||||||||    
T  2578493 cacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttc-aacctttactcttttatccg-tgtgggacatataact 2578590  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  2578591 cacacttgtacacaaca 2578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 593759 - 593868
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||| |  ||||||  ||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||| ||||    
T  593759 cacactattacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatacaact 593857  T
Q  168 cacacttgcac 178  Q
    |||||||||||    
T  593858 cacacttgcac 593868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 16455057 - 16454900
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| ||| | |||||| |||||| |||| ||||||||||  |||||| |||||| |||||||||||||    
T  16455057 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggt 16454958  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| |||||||||| || |||| ||| ||||||| |||||||||| ||| ||||||||    
T  16454957 gttc-aacctttactcttttatctgatgtgggacacataactcacatttgtacacaaca 16454900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 26544158 - 26544049
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||| | |||| |||||||  || |||||| ||||||||||||||||| || ||||| |||||||| || |||||||| |||||||||||||    
T  26544158 tcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaa-cctttactattttatccgatgtgggacatataac 26544060  T
Q  167 tcacacttgca 177  Q
    |||||||||||    
T  26544059 tcacacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 2578885 - 2579000
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||| ||||||||||| | |||||||| ||||||||| ||| ||| ||||||||| ||||||||  ||||||||||| |    
T  2578885 cacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattc-aacatttactttt-tatccgatgagggacatataaat 2578982  T
Q  168 cacacttgcacacaacac 185  Q
    ||||||||| ||||||||    
T  2578983 cacacttgctcacaacac 2579000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 16108152 - 16108056
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||| ||| ||| |||||||||||||||||| ||||||||    
T  16108152 ttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacatttactcttttatctgatgtggaacatataactcacacttgtacacaaca 16108056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 9062400 - 9062501
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||||| ||| ||||||||||||  ||||||||||||||||| | ||||| |||||||| || |||||||| ||||||||||||||    
T  9062400 cacacttttacccaaaactt-aagacaatgagtttatgagtcctcttacttataagatgttcaa-cctttactattttatccgatgtgggacatataact 9062497  T
Q  168 caca 171  Q
    ||||    
T  9062498 caca 9062501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 6999846 - 6999951
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| |||||||| ||||||||| | ||||||||| |||||||| ||||| | ||||||||| |||||||| | ||||||||||||    
T  6999846 cacactcttatccaaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaa-cttttacttttttatccgatgtaggacatataact 6999944  T
Q  168 cacactt 174  Q
    |||||||    
T  6999945 cacactt 6999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 16454725 - 16454568
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| ||| | |||||| ||| || |||  ||||||||||| |||||| ||||||||||||||||||||    
T  16454725 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggt 16454626  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| ||| |||| | || |||| ||| ||||||| |||||||||||||| ||||||||    
T  16454625 gttc-aacttttattcttttatctgatgtgggacacataactcacacttgtacacaaca 16454568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 1127468 - 1127360
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||| |||| ||||||  ||||||||||||||||||| ||| |||||||||| || || ||||| ||||| ||||||||    
T  1127468 cacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttc-aacctttactattttacccgatgtgggatatataact 1127370  T
Q  168 cacacttgca 177  Q
    |||| |||||    
T  1127369 cacagttgca 1127360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 3415566 - 3415462
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||| ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||||| || |||  ||| ||||||||||||||    
T  3415566 cacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttc-aacctttactattttatgtgatgtgggacatataact 3415468  T
Q  168 cacact 173  Q
    ||||||    
T  3415467 cacact 3415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 6071221 - 6071125
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||||||||| | || ||| |||||||| || ||||| |||  |||||||||| | || |||||||||||||||||||||||||||||||    
T  6071221 ttaaggcaatgagtttatggatcatctcacttataaagtgttcaa-cctccacttttctattcaatgtgggacatataactcacacttgcacacaaca 6071125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 12092546 - 12092648
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| |||||||||||||||||| | |||||| |||||||| ||  |||| |||  ||||||||||||||| |||||||| |||| ||| ||||||||||    
T  12092546 aaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaa-cctccacttttctatccgatgtgggacatctaacacacccttgcacaca 12092644  T
Q  182 acac 185  Q
    ||||    
T  12092645 acac 12092648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 1846856 - 1846748
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| |||||||||||  ||||| ||| |||||||||||||||| ||| |||||||||| || |||||||| || |||||| || |    
T  1846856 cacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttc-aacctttactattttatccgatgtgagacatagaatt 1846758  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  1846757 cacacttgca 1846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 2843663 - 2843547
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttat-tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    |||||| |||||| |||| ||||||||||||||||||  |||||||||||||||||||| ||| ||| |||| | || |||||||| ||  |||||||||    
T  2843663 cacactcttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttc-aacttttattattttatccgatgtgaaacatataac 2843565  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||| |||  |||||||    
T  2843564 tcacaattgtgcacaaca 2843547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 3409768 - 3409660
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  | ||||||||| |||||| |||||||||||||||||| | ||| ||| |||||| || |||| ||| ||| ||||||||||    
T  3409768 cacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttc-aacttttactattttatctgatgtggtacatataact 3409670  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  3409669 cacacttgca 3409660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 1950233 - 1950340
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| |||| | |||| |||||||| |   ||||| | ||||||||||| |||||| ||||| |||||||| || |||||||| ||||||||||||    
T  1950233 gtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaa-cctttactcttttatccgatgtgggacatataa 1950331  T
Q  166 ctcacactt 174  Q
    |||||||||    
T  1950332 ctcacactt 1950340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 5832108 - 5832191
Alignment:
Q  100 tttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||| |||||||||||||||||||| ||||| |||||||| || ||||| || |||||||||||||| |||||||  |||||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaa-cctttactcttttatccaatgtgggacatataacttacacttgtgcacaaca 5832191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 5958667 - 5958764
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacac 180  Q
    |||||||||| ||||||||||||  || |||||| ||||||||| ||| |||||||||| || |||||||| |   |||||||||||||| ||||||||    
T  5958667 aaactttaagacaatgagtttatgagttctcttatttataaggtgttc-aacctttactgttttatccgatgtaacacatataactcacaattgcacac 5958764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 8482034 - 8481920
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  ||||||||||||||||||  ||| ||| | |||||| || ||||| |||  |||||| |||| ||| ||| ||||||||||    
T  8482034 cacactcttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaa-cctccacttttatatctgatgtgg-acatataact 8481937  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  8481936 cacacttgcacacaaca 8481920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 17135144 - 17135223
Alignment:
Q  93 caatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacact 173  Q
    ||||||||||||   ||||||| |||||||||| || |||| ||||||| |||||||||| || |||||||||||||||||    
T  17135144 caatgagtttatgaatcctcttgcttataaggtatt-aaacatttacttctctatccgatgtgagacatataactcacact 17135223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 2579203 - 2579270
Alignment:
Q  116 cttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| ||||| | |||||| || |||||||| |||||||||||||| ||||||| ||||||||    
T  2579203 cttataaggtgttcaa-cttttactcttttatccgatgtgggacatataactaacacttgtacacaaca 2579270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 184
Target Start/End: Original strand, 7588359 - 7588389
Alignment:
Q  154 tgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||||||||||||||||||||||    
T  7588359 tgggacatataactcacacttgcacacaaca 7588389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 33605693 - 33605647
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| ||| || |||||||| |||||||||||||||||||    
T  33605693 acttttctatctgatgtgagacatatagctcacacttgcacacaaca 33605647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 184
Target Start/End: Original strand, 1085604 - 1085781
Alignment:
Q  6 gaggggagccaggagggtcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttatt 105  Q
    ||||||||||||| ||  | |||||||||||| || ||  ||| ||||||  ||| ||| | |||||| |||||| |||| ||||||||||| ||||||     
T  1085604 gaggggagccagggggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatg 1085703  T
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||| || ||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  1085704 ggtcctcttacttataaagtgttc-aacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 1085781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 184
Target Start/End: Complemental strand, 7517750 - 7517573
Alignment:
Q  6 gaggggagccaggagggtcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttatt 105  Q
    ||||||||||| | ||  || ||||||||||| || ||  ||| |||||| |||| |||   |||||| |||||| |||| ||||||||||| ||||||     
T  7517750 gaggggagccaaggggaccacccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatg 7517651  T
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  7517650 ggtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataactcacacttgcacacaaca 7517573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 45434745 - 45434629
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||||| |||| |||||||| | ||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||||||||    
T  45434745 tcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaa-cctttacttttttatccgatgtgggacatataac 45434647  T
Q  167 tcacacttgcacacaaca 184  Q
    | ||||||| ||||||||    
T  45434646 ttacacttgtacacaaca 45434629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 7554133 - 7554018
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||| ||| |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  7554133 cacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataact 7554035  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  7554034 cacacttgcacacaaca 7554018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 8128491 - 8128606
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| ||||||  ||| |||||| ||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  8128491 cacactcttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaa-cctttatttttctatccgatatgggacatataact 8128589  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  8128590 cacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 22566712 - 22566827
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| |||||||||| |||    
T  22566712 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatattact 22566810  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||| ||||||    
T  22566811 cacacttgcatacaaca 22566827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30244378 - 30244263
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| ||||||  ||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  30244378 cacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaa-cctttactcttttatccgatgtgggacatataact 30244280  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  30244279 cacacttgtacacaaca 30244263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30245185 - 30245070
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| |||| ||||||||||||||| ||| |||||||||| || |||||||| ||| ||||||||||    
T  30245185 cacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttc-aacctttactcttttatccgatgtggaacatataact 30245087  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  30245086 cacacttgtacacaaca 30245070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 16569290 - 16569189
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| || ||||||||||||||||||||| |||    
T  16569290 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaa-cctttactgttctatccgatgtgagacatataactcacacttgcataca 16569192  T
Q  182 aca 184  Q
    |||    
T  16569191 aca 16569189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 16596372 - 16596473
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| || ||||||||||||||||||||| |||    
T  16596372 aaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaa-cctttactgttctatccgatgtgagacatataactcacacttgcataca 16596470  T
Q  182 aca 184  Q
    |||    
T  16596471 aca 16596473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 177
Target Start/End: Original strand, 37533067 - 37533168
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || ||||| || |||||||||||||||||||||    
T  37533067 ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatgtgggacatataactcacactt 37533165  T
Q  175 gca 177  Q
    |||    
T  37533166 gca 37533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 28301613 - 28301709
Alignment:
Q  88 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
    |||||||||| |||||| |||||||||||||||||||| ||||  | |||||||||||||||||| || |||||||||||||||||||||||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcag-cttttacttttctatccgatgtgagacatataactcacacttgcacacaacac 28301709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 23427 - 23542
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| ||||||||||    
T  23427 cacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttc-aacctttactattgtatccgatgtggaacatataact 23525  T
Q  168 cacacttgcacacaaca 184  Q
    |||| ||||||||||||    
T  23526 cacaattgcacacaaca 23542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 24177543 - 24177428
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||||||||||||||| |||||| ||||| |||||||||||||| ||||  |||||||| || |||||||| ||||||||||||||    
T  24177543 cacactcttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcag-cctttactcttttatccgatgtgggacatataact 24177445  T
Q  168 cacacttgcacacaaca 184  Q
    || ||||||||||||||    
T  24177444 catacttgcacacaaca 24177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 118351 - 118466
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||| || |||| |||||| | ||||||||||||| |||| ||||| |||||||||||||||| ||| ||||||||||||||    
T  118351 cacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaa-cctttacttttctatctgatgtgggacatataact 118449  T
Q  168 cacacttgcacacaaca 184  Q
     ||||||||||||||||    
T  118450 tacacttgcacacaaca 118466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 22567089 - 22567203
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||||||| | |||||||| |||    
T  22567089 cacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgt-ggacatattact 22567186  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||| ||||||    
T  22567187 cacacttgcatacaaca 22567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 36939783 - 36939898
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||  ||||| |||||||||||||||||||| ||| ||| |||||| || ||| |||| ||||||||||||||    
T  36939783 cacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttc-aacttttactattttatacgatttgggacatataact 36939881  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||| ||||    
T  36939882 cacacttgcacagaaca 36939898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 1085298 - 1085414
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat-ataac 166  Q
    |||||| |||||| |||| |||||||||||||||||| ||| ||||||||||| || | ||| ||| |||||| || ||||||||||||||||| | |||    
T  1085298 cacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttc-aacttttactattttatccgatatgggacataaaaac 1085396  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||||||||||||||||    
T  1085397 tcacacttgcacacaaca 1085414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 29157673 - 29157565
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||  ||||| |||| ||||||||||||||| ||| |||||||||| || |||||| | ||||||||||||||    
T  29157673 cacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttc-aacctttactattttatccggtgtgggacatataact 29157575  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  29157574 cacacttgca 29157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 40094783 - 40094939
Alignment:
Q  27 ccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggtt 126  Q
    ||||||||||| || ||  ||| ||||||  ||| ||| | |||||| |||||| |||| ||||| | ||| |||||| ||||||||||||||||||||     
T  40094783 ccacatcgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtg 40094882  T
Q  127 ttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    || || |||||||| || ||| |||| || ||||||||||||||||||||||||||||    
T  40094883 ttgaa-cctttactcttttattcgatgtgagacatataactcacacttgcacacaaca 40094939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 6054668 - 6054562
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| || |||||||||||    
T  6054668 cacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttc-aacatttactattttatccgatgtgagacatataact 6054570  T
Q  168 cacacttg 175  Q
     |||||||    
T  6054569 aacacttg 6054562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 20599415 - 20599317
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||||||||||||||||  ||||||||| |||||| || || |  ||||||||||| ||||||||||||||||||||||||||||||    
T  20599415 ttacccaaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttat-cctttacttttttatccgatatgggacatataactcacactt 20599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 43241589 - 43241488
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||| |||| |||||||  ||||| ||||||||||||| ||||| |||||| |||| |||||||| ||| ||||||||||||||||||||||||    
T  43241589 aaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaa-cctttatttttttatccgatgtggaacatataactcacacttgcacaca 43241491  T
Q  182 aca 184  Q
    |||    
T  43241490 aca 43241488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 41910663 - 41910759
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||| ||||| |||||| |||||||| | ||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||| |||||||||    
T  41910663 ttaagccaatgggtttatgggtcctctcagttataaggtattcaa-cctttactcttttatccgatgtgggacatataactcacacttacacacaaca 41910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 34218084 - 34218199
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| ||||| ||||||  ||||||| ||||||||||| ||||| | ||||||||| |||||||| || |||||||||||    
T  34218084 cacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaa-catttacttttttatccgatgtgagacatataact 34218182  T
Q  168 cacacttgcacacaaca 184  Q
    |||| ||| ||||||||    
T  34218183 cacatttgtacacaaca 34218199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 30245561 - 30245487
Alignment:
Q  109 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||| ||||| |||||||| || |||| ||| |||||||||||||||||||||||||||||||    
T  30245561 cctcttacttataaggtgttcaa-cctttactcttttatctgatgtgggacatataactcacacttgcacacaaca 30245487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 30255406 - 30255332
Alignment:
Q  109 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||| |||||||||||||||||    
T  30255406 cctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataacgcacacttgcacacaaca 30255332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 40230348 - 40230454
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||| | ||| |||||| |||||||||||||||||| | ||||| | ||||||||| ||| |||| |||||||||||||| ||||||    
T  40230348 ttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaa-cttttacttttttattcgatgtgggacatataacttacactt 40230446  T
Q  175 gcacacaa 182  Q
    ||||||||    
T  40230447 gcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 45433412 - 45433234
Alignment:
Q  5 agaggggagccaggagggtcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttat 104  Q
    |||||||||||||| ||  |  ||||||||||| || ||  ||||||||||  ||| |||   |||||| |||||| |||  ||||||||||  ||||||    
T  45433412 agaggggagccagggggaccgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttat 45433313  T
Q  105 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
      || |||||||||||||||| ||||| |||||||| || |||||||| |||  ||||||||||||||||| ||||||||    
T  45433312 gagttctcttacttataaggtgttcaa-cctttactcttttatccgatgtggatcatataactcacacttgtacacaaca 45433234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 11845299 - 11845198
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| |||||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| ||||||||||    
T  11845299 cacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatataact 11845201  T
Q  168 cac 170  Q
    |||    
T  11845200 cac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 30244771 - 30244694
Alignment:
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| ||||||||| ||||| |||||||| || ||||| || |||||||||||||||||||||||||||||||    
T  30244771 ggtcctcttatttataaggtgttcaa-cctttactcttttatccaatgtgggacatataactcacacttgcacacaaca 30244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 14681618 - 14681510
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| ||||| |||||| || ||||||||||| ||||| ||| |||||||||| || |||| ||| ||||||||||||||    
T  14681618 cacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttc-aacctttactattttatctgatgtgggacatataact 14681520  T
Q  168 cacacttgca 177  Q
     |||||||||    
T  14681519 tacacttgca 14681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 36109007 - 36109082
Alignment:
Q  108 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||||||||| ||||| |||||||| || |||||||| || || |||||||||||||||||||||||||    
T  36109007 tcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgagaaatataactcacacttgcacacaaca 36109082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 45754823 - 45754709
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||| ||| ||||||  ||| ||||||||||||||| ||| ||| |||||| || |||||||| | ||||||||||||    
T  45754823 cacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttc-aacatttactattttatccgatgt-ggacatataact 45754726  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  45754725 cacacttgtacacaaca 45754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 172
Target Start/End: Complemental strand, 30032717 - 30032572
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| |||||||||||| |||||| |||| ||||||| ||  |||||| | | ||||||||||||||||    
T  30032717 tccacatcgaggatagaacaaccgcacaagcaagagagatgtcacactcttacccaaaaccttaaggctataggtttatggatactcttacttataaggt 30032618  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacac 172  Q
     ||| |||  ||||| || ||| |||| |||||||||||||||||||    
T  30032617 gttc-aacacttactcttttattcgatgtgggacatataactcacac 30032572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 182
Target Start/End: Complemental strand, 36623060 - 36622955
Alignment:
Q  76 taccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttg 175  Q
    ||||| |||| |||||||||||  ||||| | ||||| |||||||||  | ||  |||||||||| || |||||||| ||||||||||||||||||||||    
T  36623060 tacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtt-taacctttactattttatccgatgtgggacatataactcacacttg 36622962  T
Q  176 cacacaa 182  Q
    |||||||    
T  36622961 cacacaa 36622955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 37533414 - 37533519
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||  ||||| |||||||||||||||||||| ||| |||||||||| || ||| | || | | ||||||||||    
T  37533414 cacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttc-aacctttactattttattcaatgtagaacatataact 37533512  T
Q  168 cacactt 174  Q
    |||||||    
T  37533513 cacactt 37533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 19122839 - 19122740
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||  |||||  ||||||||||||||||||| ||| |||||||||| || |||||||| | ||||||||||||    
T  19122839 cacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttc-aacctttactattttatccgatgt-ggacatataact 19122742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 36534865 - 36534949
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| |||||||||||||||||||| ||||| ||| |||| || |||||||  |||||||||||| | ||||||||||||||||    
T  36534865 gtttatgggtcctcttacttataaggtgttcaa-cctctactgttttatccgaggtgggacatataagttacacttgcacacaaca 36534949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 4124138 - 4124253
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| |||| |||||||||||||||||||||| |||||||| | | ||||||||  | ||||||| ||||| | |||||| ||| |    
T  4124138 cacacttttatccaaaaccttaatgcaatgagtttattggtcctctcacttataaag-tgtcaaacctcaaattttctaaccgatgtaggacatgtaatt 4124236  T
Q  168 cacacttgcacacaaca 184  Q
    |||| ||||||||||||    
T  4124237 cacagttgcacacaaca 4124253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 41854752 - 41854630
Alignment:
Q  58 agaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggg 157  Q
    ||||||| |||||||| |||||| |||| |||||||| |   ||||| |||| |||| |||||||||| ||||| |||||||| || || | ||| ||||    
T  41854752 agaaagacgtcacactcttacccaaaaccttaaggcattatatttataggtcatcttgcttataaggtgttcaa-cctttactctttta-ctgatgtggg 41854655  T
Q  158 acatataactcacacttgcacacaa 182  Q
    |||||||||||| ||||||||||||    
T  41854654 acatataactcatacttgcacacaa 41854630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 47129195 - 47129088
Alignment:
Q  76 taccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttg 175  Q
    ||||| |||| |||| || ||| |||||| ||||||||||||||||||   ||||| |||||||| || |||||||| || |||||||||||||||||||    
T  47129195 tacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaa-cctttactattttatccgatgtgagacatataactcacacttg 47129097  T
Q  176 cacacaaca 184  Q
      |||||||    
T  47129096 tgcacaaca 47129088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 30253600 - 30253537
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaa 131  Q
    |||||| |||||| |||| |||||||||||||||||| ||| |||||||||||||||| |||||    
T  30253600 cacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaa 30253537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 24838749 - 24838867
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcct-cttacttataaggttttcaaacctttacttttctatccgatatgggacatata 164  Q
    |||||||| |||||| |||| ||||| ||| | |||||| | |||| |||||||||||||| ||||| |||||||| || ||| |||| || ||||||||    
T  24838749 gtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaa-cctttactcttttattcgatgtgagacatata 24838847  T
Q  165 actcacacttgcacacaaca 184  Q
    ||| ||||||  ||||||||    
T  24838848 acttacacttatacacaaca 24838867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 9901751 - 9901648
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| |||||||||||| | ||||| ||| |||||| | ||| |||||||||| || |||||||| | ||||||||||||    
T  9901751 cacactcttacccaaaaccttaagacaatgagtttatggatcctc-tacgtataagatgttc-aacctttactgttttatccgatgt-ggacatataact 9901655  T
Q  168 cacactt 174  Q
    |||||||    
T  9901654 cacactt 9901648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 36967344 - 36967394
Alignment:
Q  134 ctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| |||||||| || ||||||||||||||||||| ||||||||    
T  36967344 ctttacttttttatccgatgtgagacatataactcacacttgtacacaaca 36967394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 40094506 - 40094560
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
    |||||||||| || |||| ||| | ||||||||||||||||||||||||||||||    
T  40094506 aacctttactcttttatctgatgttggacatataactcacacttgcacacaacac 40094560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 37393105 - 37393057
Alignment:
Q  136 ttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||||  |||||| |||||||||||| ||||||||||||||    
T  37393105 ttacttttctatctaatatggaacatataactcaaacttgcacacaaca 37393057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 37345600 - 37345551
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaacacgt 187  Q
    ||||| |||| |||| ||||||||||||||||| ||||||||| ||||||    
T  37345600 actttcctattcgatgtgggacatataactcactcttgcacacgacacgt 37345551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 3244506 - 3244615
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| || ||||||||||||||||||    
T  3244506 ttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaa-cctttacttttctatccgatgtgagacatataactcacactt 3244604  T
Q  175 gcacacaacac 185  Q
    |||||||||||    
T  3244605 gcacacaacac 3244615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 36629345 - 36629229
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||| || || | |||||||||||||||||| ||||||||||||||    
T  36629345 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaa-cttttacttttctatccgatgtgggacatataact 36629247  T
Q  168 cacacttgcacacaacac 185  Q
    |||||||| |||||||||    
T  36629246 cacacttgaacacaacac 36629229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 49076507 - 49076611
Alignment:
Q  79 cccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcac 178  Q
    ||||||||||||| ||||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||||||| |||||||||||||||||||||    
T  49076507 cccaaactttaagacaatgggtttataggtcctcttacttataaggtgttcaa-cctttactgttttatccgatatggtacatataactcacacttgcac 49076605  T
Q  179 acaaca 184  Q
    ||||||    
T  49076606 acaaca 49076611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 41370464 - 41370357
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| |||||| |||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||| || |||||||| |||||||||||||||    
T  41370464 acactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttc-aacatttactattttatccgatttgggacatataactc 41370366  T
Q  169 acacttgca 177  Q
    |||||||||    
T  41370365 acacttgca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 16888863 - 16888980
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||||| ||||  |||| |||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||    
T  16888863 tcacactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaa-cctttacttttctatccgatgtgggacatataac 16888961  T
Q  167 tcacacttg-cacacaaca 184  Q
    ||||||||| |||||||||    
T  16888962 tcacacttgccacacaaca 16888980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 4955365 - 4955480
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| ||||||  ||||||||||||||||||| ||||| |||| ||| || ||||||||||| |||||||||||    
T  4955365 cacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaa-ccttaactattttatccgatatgagacatataact 4955463  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  4955464 cacacttgcacacaaca 4955480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 184
Target Start/End: Complemental strand, 2740827 - 2740693
Alignment:
Q  49 ccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc 148  Q
    ||||||| |||| ||| | |||||| ||||   |||| |||||||  || |||||| |||||||||||||||||||| ||||| |||||||| |||||||    
T  2740827 ccacaagtgagagagacgccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaa-cctttactgttctatc 2740729  T
Q  149 cgatatgggacatataactcacacttgcacacaaca 184  Q
    |||| |||||||||||||||||||||||||||||||    
T  2740728 cgatgtgggacatataactcacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 52884981 - 52884880
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||| |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||||||||||    
T  52884981 aaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacacttgcacaca 52884883  T
Q  182 aca 184  Q
    |||    
T  52884882 aca 52884880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 2741179 - 2741063
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||   |||| |||||||||||||||||||| ||||| |||||||| ||||||| ||| ||||||||||||||    
T  2741179 cacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaa-cctttactattctatctgatgtgggacatataact 2741081  T
Q  168 cacacttgcacacaacac 185  Q
    |||||||||||| |||||    
T  2741080 cacacttgcacataacac 2741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 52884804 - 52884688
Alignment:
Q  68 cacactgttaccccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    |||||| |||||||||| | ||||||||||| |||||| | || ||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||    
T  52884804 cacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataac 52884706  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||||||||||||||||    
T  52884705 tcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 55933172 - 55933280
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||||||||||||||| |||||| |||||||||||||||||||| ||| |||| ||||| || |||||||| | ||||||||||||    
T  55933172 cacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacccttactattttatccgatgtaggacatataact 55933270  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  55933271 cacacttgca 55933280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 25483444 - 25483329
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| | |||||||||||||||| | ||||| |||||||| || |||||||| || |||||||||||    
T  25483444 cacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaa-cctttactattttatccgatgtgagacatataact 25483346  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  25483345 cacacttgcacacaaca 25483329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 34646697 - 34646812
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||||||||||  ||||||||| ||||||||| ||| ||| |||||| || |||||||| ||||||||||||||    
T  34646697 cacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttc-aacatttactgttttatccgatgtgggacatataact 34646795  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  34646796 cacacttgtacacaaca 34646812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 39792908 - 39793023
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||  | ||||||| |||||||||| ||||| | |||||||||||||| ||| ||||||||||||||    
T  39792908 cacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaa-catttacttttctatctgatgtgggacatataact 39793006  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  39793007 cacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 32941129 - 32941286
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| ||| |||||||| |||||| |||| ||||||||||||||||||  | ||||||| |||||||||    
T  32941129 tccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggt 32941228  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| |||||||||| |||| |||||| |  ||||||||||||||||||||| ||||||    
T  32941229 gttc-aacctttactgttctttccgatgtaagacatataactcacacttgcagacaaca 32941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 3340957 - 3340802
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||||||||||  |||||||   |||||| |||||| |||| |||||||| || |||||| ||||||||||||||||||||    
T  3340957 tccacatcgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggt 3340858  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaa 182  Q
      || |||||||||| ||  ||| |||  ||||||||||||||||||||||||||||    
T  3340857 gctc-aacctttactctttcatctgatgcgggacatataactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 10246027 - 10245913
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||  || |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||| |||||||||    
T  10246027 cacactcttacccaaaaccttaaggctttgggtttat-ggtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtggggcatataact 10245930  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  10245929 cacacttgcacacaaca 10245913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 54741227 - 54741341
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| ||| || |||| ||||| ||||  || ||| |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||| ||    
T  54741227 acactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataattc 54741325  T
Q  169 acacttgcacacaaca 184  Q
    ||||||||||||||||    
T  54741326 acacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 16889591 - 16889700
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| ||||||||||||| |  ||||||   |||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||    
T  16889591 ttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaa-cctttacttttctatccgatttgagacatataactcacactt 16889689  T
Q  175 g-cacacaaca 184  Q
    | |||||||||    
T  16889690 gccacacaaca 16889700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 50630762 - 50630911
Alignment:
Q  27 ccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggtt 126  Q
    ||||||||||| |||||  ||| ||||||  ||| |||   |||||| |||||| |||| ||||||||||| |||||| ||||||||||||||||| ||     
T  50630762 ccacatcgaggctaaaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtg 50630861  T
Q  127 ttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    ||| |||||||||| || |||||||| | ||||||||||||||| ||||||    
T  50630862 ttc-aacctttactattttatccgatgtaggacatataactcacgcttgca 50630911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 54109020 - 54108907
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||||| ||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||  ||||||    
T  54109020 cacactcttacccaaaactt-aaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggac--ataact 54108925  T
Q  168 cacacttgcacacaacac 185  Q
     |||||||||||||||||    
T  54108924 gacacttgcacacaacac 54108907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 22028016 - 22028124
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||  | || |||||||| |||||||||||| ||||||||    
T  22028016 ttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttc-aacctttcgtattttatccgatgtgggacatataagtcacactt 22028114  T
Q  175 gcacacaaca 184  Q
    ||||||||||    
T  22028115 gcacacaaca 22028124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 54017642 - 54017754
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||||  |||| ||||||||||| |||||| |||||||||||||||||| | ||| |||||||||| || |||| ||  |||||||||||||    
T  54017642 tcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttc-aacctttactattttatctgacgtgggacatataac 54017740  T
Q  167 tcacacttgcacac 180  Q
    ||||||||||||||    
T  54017741 tcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 1731695 - 1731810
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||  |||||| |||||||||| ||||||| | ||||| |||||||| || |||| ||| ||||||||||||||    
T  1731695 cacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaa-cctttactgttttatctgatgtgggacatataact 1731793  T
Q  168 cacacttgcacacaaca 184  Q
    |||| ||||||||||||    
T  1731794 cacatttgcacacaaca 1731810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 3341275 - 3341121
Alignment:
Q  29 acatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggtttt 128  Q
    |||||||||||||||| ||| || ||   |||||||  ||||||| |||||| |||  ||||  ||||||  |||| ||||||||||||||||| || ||    
T  3341275 acatcgaggttaaaataaccacataattaagaaagacatcacactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtt 3341176  T
Q  129 caaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     || |||||||| || ||||| || |||||||||||||||||||||||||||||||    
T  3341175 taa-cctttactcttttatccaatgtgggacatataactcacacttgcacacaaca 3341121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 22183270 - 22183427
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  |||  ||||| |||| ||| | |||||| ||| || |||| ||||||||||| |||||| |||||| ||||||||||  |    
T  22183270 tccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaatt 22183369  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||||| | |||||| || |||||||| ||||| |||||||||||||||||||||||||    
T  22183370 gttcaa-catttactcttttatccgatgtgggatatataactcacacttgcacacaaca 22183427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 41707526 - 41707627
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||| |||||||||||| ||| || ||||||||| ||| ||||| |||||||| || |||||||| |||||||||||||||||||||| |||||    
T  41707526 aaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaa-cctttactcttttatccgatgtgggacatataactcacacttgtacaca 41707624  T
Q  182 aca 184  Q
    |||    
T  41707625 aca 41707627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 49880261 - 49880160
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| |||||||| || |||||| |||||||||||||||||||| ||| |||||||||| || ||| | || |||||||||||||||||||||    
T  49880261 ttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttc-aacctttactattttattcaatgtgggacatataactcacactt 49880163  T
Q  175 gca 177  Q
    |||    
T  49880162 gca 49880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 51768115 - 51768223
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||| ||||||||||||  ||||||||| ||||||||| ||||| | |||||| || ||| |||||| |||||||||||||||| ||    
T  51768115 ttacccaaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaa-catttactcttatattcgatataggacatataactcacattt 51768213  T
Q  175 gcacacaaca 184  Q
    ||||||||||    
T  51768214 gcacacaaca 51768223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 36608709 - 36608824
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| |||||  ||||| | ||||||||||||| |||| ||||| | |||||| || |||||||| | ||||||||||||    
T  36608709 cacactcttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaa-cttttactcttttatccgatgttggacatataact 36608807  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  36608808 cacacttgcacacaaca 36608824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 50002534 - 50002419
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| |||||  ||||| |||||||||||||| || || ||||| |||||||| || |||||||| || |||||||||||    
T  50002534 cacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaa-cctttactcttttatccgatgtgagacatataact 50002436  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||| ||||||    
T  50002435 cacacttgcaaacaaca 50002419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 22028417 - 22028534
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaaccttta--cttttctatccgatatgggacatataa 165  Q
    |||||| |||||| |||| ||||| |||||||||||| |||||||||||| ||||||| ||| ||||||||   |||| |||||||| | ||||||||||    
T  22028417 cacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttc-aacctttatttttttttatccgatgtaggacatataa 22028515  T
Q  166 ctcacacttgcacacaaca 184  Q
     | ||||||||||||||||    
T  22028516 gtaacacttgcacacaaca 22028534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 36572118 - 36572012
Alignment:
Q  77 accccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgc 176  Q
    |||| |||| |||||||||||  ||||| |||| ||||||||||||||| ||||| | |||||| || ||| |||| ||||||||||||||||||||||     
T  36572118 acccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaa-catttactcttttattcgatgtgggacatataactcacacttgt 36572020  T
Q  177 acacaaca 184  Q
    ||||||||    
T  36572019 acacaaca 36572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 44620767 - 44620654
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||  ||| |||||| ||||||||||||||||| || ||||| ||| |||| ||  ||||||| ||||||||||||||    
T  44620767 cacactcttacccaaaaccttaaggttatg-gtttatgggtcctcttacttataaagtgttcaa-cctctactatttcatccgatgtgggacatataact 44620670  T
Q  168 cacacttgcacacaac 183  Q
    ||||||||||||||||    
T  44620669 cacacttgcacacaac 44620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 39404492 - 39404391
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||| ||  |||||| |||||||||||||||||||| ||| | |||||||| || |||| ||| |||||||||||||||||||||| |||||    
T  39404492 aaaccttaaggctataggtttatgggtcctcttacttataaggtgttcca-cctttactcttttatctgatgtgggacatataactcacacttgtacaca 39404394  T
Q  182 aca 184  Q
    |||    
T  39404393 aca 39404391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 45496913 - 45496820
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacata 162  Q
    |||||| |||||| |||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||||  || |||||||| |||||||||    
T  45496913 cacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttc-aacctttacgattttatccgatgtgggacata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 49303014 - 49302902
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttac--ttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||  ||||||| | ||| ||||||||||||| |||  ||| ||||||||||||    
T  49303014 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttc-aacctttacttttttatttgatgtgggacatataa 49302916  T
Q  166 ctcacacttgcaca 179  Q
    ||||||||| ||||    
T  49302915 ctcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 760278 - 760194
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 172  Q
    |||||||||||||||||| |||||||| |||||||| ||| || |||||| | |||||||| |||| |||||||||||||||||||    
T  760278 ttaaggcaatgagtttatgggtcctctcacttataaagttctc-aaccttcatttttctattcgatgtgggacatataactcacac 760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 28034337 - 28034221
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||| |||| ||||| ||||||| ||| |||| |||||||| || ||||| |||  |||||||||||||||  ||||||||||| |    
T  28034337 cacactcttacctaaaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaa-cctccacttttctatccgatgcgggacatataatt 28034239  T
Q  168 cacacttgcacacaacac 185  Q
    ||||||||||||||||||    
T  28034238 cacacttgcacacaacac 28034221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 39404168 - 39404013
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| ||| | |||||| |||||| |||| |||| || ||||||||||  |||||||||||||||| ||    
T  39404168 tccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagt 39404069  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaa 182  Q
     ||| |||||||||| || ||| | || | |||||||||||||||||||| ||||||    
T  39404068 gttc-aacctttactcttttattcaatgtaggacatataactcacacttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 54936304 - 54936193
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||| ||||| ||| |||||||||| || |||| ||| ||||    ||||||    
T  54936304 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttc-aacctttactattttatctgatgtggg----ataact 54936210  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  54936209 cacacttgtacacaaca 54936193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 4390147 - 4390264
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| |||||| |||| |||| |||||| | | |  | |||||||||||||||||| ||||| |||||||| || |||| ||| ||||| || |||    
T  4390147 gtcacactcttacccaaaaccttaacgcaatgtgctaaaggatcctcttacttataaggtgttcaa-cctttactcttttatctgatgtgggatatgtaa 4390245  T
Q  166 ctcacacttgcacacaaca 184  Q
    |||||||||||||||||||    
T  4390246 ctcacacttgcacacaaca 4390264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 31691260 - 31691202
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggtt 126  Q
    |||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||||    
T  31691260 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtt 31691202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 34004593 - 34004744
Alignment:
Q  28 cacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttt 127  Q
    |||||||||| || ||  ||| |||||| |||| ||| | |||||| ||| |  |||| |||||| ||||||||||| |||||||||||||||||| | |    
T  34004593 cacatcgaggctagaacaaccgcacaagggagagagacggcacactcttatcgaaaaccttaagg-aatgagtttatgggtcctcttacttataagttgt 34004691  T
Q  128 tcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaa 182  Q
    || |||||||| |||| ||||  || || ||||||||||||||||||||||||||    
T  34004692 tc-aacctttagtttt-tatcatatgtgtgacatataactcacacttgcacacaa 34004744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 3700434 - 3700358
Alignment:
Q  107 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||| ||||||||||||| ||||| | |||||| || |||||||| | |||||||||||||||||||||||||||||    
T  3700434 gtccttttacttataaggtgttcaa-catttactcttttatccgatgtaggacatataactcacacttgcacacaaca 3700358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 10246436 - 10246340
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||| ||| |||||| |||||||| ||||||||| | ||||| |||||||| || |||||||| || ||||||||||  ||||||||||||||||    
T  10246436 ttaaggctatgggtttatgggtcctctaacttataagatgttcaa-cctttactcttttatccgatttgagacatataacagacacttgcacacaaca 10246340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 44620462 - 44620362
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||||| |||| ||||||||||| |||||| ||  |||||| ||||||||| ||| |||||||||| || |||||||| ||| |||||||||    
T  44620462 tcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttc-aacctttactgttttatccgatgtggaacatataac 44620364  T
Q  167 tc 168  Q
    ||    
T  44620363 tc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 183
Target Start/End: Original strand, 49076837 - 49076992
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  |||||||   |||||| | |||| |||| ||||||  ||| |||||| ||| |||||||| |||||||    
T  49076837 tccacatcgaggctagaacaaccgcacaagcaagaaagacaccacactctaacccaaaaccttaaggttatgggtttatgggttctcttact-ataaggt 49076935  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaac 183  Q
     ||||| |||||||| || || || |||||| ||||||||||||||||||||||||||    
T  49076936 gttcaa-cctttactattttagccaatatggaacatataactcacacttgcacacaac 49076992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 20825944 - 20825829
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||| |   |||||| ||| |||||| ||||||||| ||||| |||||||| || |||||||| ||| ||||||||||    
T  20825944 cacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaa-cctttactcttttatccgatgtggaacatataact 20825846  T
Q  168 cacacttgcacacaaca 184  Q
    |||| ||| ||||||||    
T  20825845 cacatttgtacacaaca 20825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 44621110 - 44621011
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| ||||||||||||  | ||||||||||||||||| ||| |||||||||| || |||||||| |||| |||| ||||    
T  44621110 cacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttc-aacctttactgttttatccgatgtgggtcatacaact 44621012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 54017750 - 54017867
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggg--acatataa 165  Q
    |||||| |||||  |||| ||||| ||||| |  ||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||  | ||||||    
T  54017750 cacactcttacctaaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttc-aacctttactgttttatccgatgtgggatatatataa 54017848  T
Q  166 ctcacacttgcacacaaca 184  Q
    |||||| ||||||||||||    
T  54017849 ctcacatttgcacacaaca 54017867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 54108645 - 54108538
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagttt-attggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    |||||| ||| || |||| |||||||||||| ||| || |||||| ||||||||||||| ||||| |||||||| || ||||| |||||||||  |||||    
T  54108645 cacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaa-cctttactattttatcctatatgggac--ataac 54108549  T
Q  167 tcacacttgca 177  Q
    |||||||||||    
T  54108548 tcacacttgca 54108538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 43174615 - 43174499
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttact-tttctatccgatatgggacatataac 166  Q
    |||||| |||||| | |||||||||  ||  ||||||  ||||||||||||||||||| ||| |||||||||| ||| |||| ||| || | ||||||||    
T  43174615 cacactcttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttc-aacctttactctttttatctgatgtgtggcatataac 43174517  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||||||| ||||||||    
T  43174516 tcacacttgtacacaaca 43174499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 44621492 - 44621420
Alignment:
Q  110 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaac 183  Q
    |||||||||||||||| || || |||||||| || ||||| || | ||||||||||||||||||||||||||||    
T  44621492 ctcttacttataaggtgtttaa-cctttactgttttatcccatgttggacatataactcacacttgcacacaac 44621420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 54343087 - 54343147
Alignment:
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  54343087 ggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 18932797 - 18932880
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 152  Q
    |||||| |||||  |||| ||||||||||| |||||| |||||||||| ||||||||| ||| |||||||||| || ||||||||    
T  18932797 cacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattc-aacctttactattttatccgat 18932880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 20826306 - 20826223
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcaca 171  Q
    ||||||| ||| |||||| ||| ||||||||||||| || ||||| | |||||| || |||||||| ||||||||||||||||||    
T  20826306 ttaaggctatgggtttatgggttctcttacttataacgtgttcaa-cttttactattttatccgatgtgggacatataactcaca 20826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 44620362 - 44620289
Alignment:
Q  110 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||||||| ||||| |||||||| || ||||| || |||||||||||||||| | ||| ||||||||    
T  44620362 ctcttacttataaggtgttcaa-cctttactattttatcccatgtgggacatataactcatatttgtacacaaca 44620289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 12197424 - 12197371
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| ||||||||||  ||| |||||| ||||||||||||||||||||||||    
T  12197424 aaccttcacttttctatttgatgtgggacctataactcacacttgcacacaaca 12197371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 19504747 - 19504698
Alignment:
Q  135 tttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| || ||||||||||||||||||||||||| ||||| ||||||||    
T  19504747 tttactattttatccgatatgggacatataactcatacttgtacacaaca 19504698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 23556912 - 23557024
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| ||| || ||||||||||||||||| ||||| | | |||||| ||||||  | ||| |||||  ||||||||||||||| |   |||| |||    
T  23556912 gtcacactcttatccaaaactttaaggcaatgattttatggattctcttatttataaaatgttc-aacctccacttttctatccgatgtaaaacatttaa 23557010  T
Q  166 ctcacacttgcaca 179  Q
    ||||||||||||||    
T  23557011 ctcacacttgcaca 23557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 11706636 - 11706684
Alignment:
Q  136 ttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||| |||||||| ||||||||| ||||||| |||||||||||||    
T  11706636 ttacttttttatccgatgtgggacatacaactcacccttgcacacaaca 11706684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 50459803 - 50459724
Alignment:
Q  94 aatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||| ||||||  ||||||||||||||||| | ||||| |||||||| || || ||||| ||| |||||||||||||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaa-cctttactcttttaaccgatgtggaacatataactcacactt 50459724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 6975543 - 6975612
Alignment:
Q  107 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    ||||||||||||||||| | ||||| |||||||| || |||| ||| || ||||||||||||||| |||||    
T  6975543 gtcctcttacttataagatattcaa-cctttactattttatcggatgtgagacatataactcacatttgca 6975612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 15841034 - 15841146
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| |||||| |||||| ||| ||||| |||||| | |||||| ||||||||  | ||||  |||  ||||||||||| |||||||||||||||| ||    
T  15841034 acactcttacccaaaacttaaag-caatgggtttatagatcctctcacttataaaatgttcag-cctccacttttctatctgatatgggacatataattc 15841131  T
Q  169 acacttgcacacaac 183  Q
    ||| ||| |||||||    
T  15841132 acatttgtacacaac 15841146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 23817729 - 23817783
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataa 122  Q
    |||||| |||||| |||| ||||||||||||||||||   |||||||||||||||    
T  23817729 cacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 50788093 - 50788139
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    |||||||||| || |||||||| |||||||||||||| |||||||||    
T  50788093 aacctttactattttatccgatgtgggacatataacttacacttgca 50788139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 45050647 - 45050594
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| || |||  ||| || ||||||||||||||||||||||||||||    
T  45050647 aacctttactcttttatttgatgtgagacatataactcacacttgcacacaaca 45050594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 18879916 - 18879852
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttca 130  Q
    |||||||| |||||| |||| |||||| |||  |||||| |||| ||||||||||||||| ||||    
T  18879916 gtcacactcttacccaaaaccttaaggaaataggtttataggtcatcttacttataaggtgttca 18879852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 43827536 - 43827492
Alignment:
Q  80 ccaaactttaaggcaatgagtttattggtcctcttacttataagg 124  Q
    |||||| |||||||||||| ||||| |||||||||| ||||||||    
T  43827536 ccaaaccttaaggcaatgaatttatgggtcctcttatttataagg 43827492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 18603108 - 18603276
Alignment:
Q  6 gaggggagccaggagggtcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttatt 105  Q
    |||||||||||||||   | |||||||||||| || || |||| ||||||  ||| ||||| |||||| |||||| |||| ||||||||||| ||||||     
T  18603108 gaggggagccaggagaaccgtccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatg 18603207  T
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttg 175  Q
    |||||||||||||||||||| ||| |||||||||| || |||| ||| ||||||||||||||||||||||    
T  18603208 ggtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 26074720 - 26074607
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||||||| ||||||||||    
T  26074720 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatatggaacatataact 26074622  T
Q  168 cacacttgcacacaa 182  Q
    |||||||| ||||||    
T  26074621 cacacttgtacacaa 26074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 36568577 - 36568732
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| |||||||||||  || | |||||| |||||  |||| ||||||||||| |||||  |||| ||| |||||||||||    
T  36568577 tccacatcgaggatagaacaaccacacaagagaga--gacgccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggt 36568674  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36568675 gttcaa-cttttacttttctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 26074196 - 26074312
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| ||| || ||||||||||| ||| |||| ||||| ||||||||||| |||||||| || |||||||||||    
T  26074196 cacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaa-cctttacttttttatccgatgtgtgacatataact 26074294  T
Q  168 cacacttgcacacaacac 185  Q
    ||||||||||||||||||    
T  26074295 cacacttgcacacaacac 26074312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 40296365 - 40296477
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| | ||||||||| |||||| |||||||||||||||||||| ||| ||||||| || || |||||||| ||||||||||||||    
T  40296365 cacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttc-aaccttttctattttatccgatgtgggacatataact 40296463  T
Q  168 cacacttgcacaca 181  Q
    ||||||||||||||    
T  40296464 cacacttgcacaca 40296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 41632890 - 41632774
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  |||| ||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||    
T  41632890 cacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgagacatataact 41632792  T
Q  168 cacacttgcacacaacac 185  Q
     |||||||||||||||||    
T  41632791 tacacttgcacacaacac 41632774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 299597 - 299482
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| | |||| ||||||| |||||||||| |||| ||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  299597 cacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataact 299499  T
Q  168 cacacttgcacacaaca 184  Q
    ||||||||| |||||||    
T  299498 cacacttgcgcacaaca 299482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 6224304 - 6224189
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| || |||||||  ||||||||||||||    
T  6224304 cacactcttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgaagtgggacatataact 6224206  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  6224205 cacacttgtacacaaca 6224189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 13415810 - 13415925
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||| |||  |||||| |||||||||||||||||||| ||||| ||||||||  | |||||||| ||||||||||||||    
T  13415810 cacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaa-cctttactaatttatccgatgtgggacatataact 13415908  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  13415909 cacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 36492267 - 36492382
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| | |||| |||| ||||||||||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  36492267 cacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataact 36492365  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||| ||||||    
T  36492366 cacacttgcaaacaaca 36492382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 1028525 - 1028683
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| |||||| |||| ||| | |||||| |||||  |||| ||||||  ||  |||||| ||||||||||||||||| ||    
T  1028525 tccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttataaagt 1028624  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
     ||||  |||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  1028625 gttcat-cctttacttttctatccgatgtgggacatataactcacacttgtacacaacac 1028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 32487503 - 32487394
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| |||||| |||| ||||||||||| |||||| ||||||||||||||| |||| ||| |||||||||| || |||||||| ||||||||||||    
T  32487503 gtcacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat-aggtgttc-aacctttactattttatccgatgtgggacatataa 32487406  T
Q  166 ctcacacttgca 177  Q
    ||||||||||||    
T  32487405 ctcacacttgca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 26075219 - 26075327
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| || ||||||||| ||||||||    
T  26075219 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgagacatataaatcacactt 26075317  T
Q  175 gcacacaaca 184  Q
    | ||||||||    
T  26075318 gtacacaaca 26075327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 41170742 - 41170640
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||| | ||| |||||||||| || |||||||| ||||||||||||||    
T  41170742 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttc-aacctttactattttatccgatgtgggacatataact 41170644  T
Q  168 caca 171  Q
    ||||    
T  41170643 caca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 34753033 - 34753190
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| ||| | |||||| |||||| |||| ||||||||||  |||||| |||| |||||||||||||||    
T  34753033 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggt 34753132  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| ||| ||||||||||||||| || |||||||||||||| ||| ||| ||||||||    
T  34753133 gttc-aacttttacttttctatccaatgtgggacatataacttacatttgtacacaaca 34753190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 172
Target Start/End: Complemental strand, 38427717 - 38427553
Alignment:
Q  6 gaggggagccaggagggtcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttatt 105  Q
    |||||||||  ||| | |||||||||||||||||| ||  ||| |||||| |||| ||| |||||||| |||| | |||| ||||| |||||  || ||     
T  38427717 gaggggagctcggaagatcatccacatcgaggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatg 38427618  T
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 172  Q
    |||||||| ||||||||| | ||||| ||||||||||||||||| || |||||||||||||||||||    
T  38427617 ggtcctct-acttataagatgttcaa-cctttacttttctatccaatgtgggacatataactcacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 6500558 - 6500451
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||  |||||||||||||||||||| ||| |||||||||| || |||||||| | ||||||||||||    
T  6500558 cacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttc-aacctttactattttatccgatgt-ggacatataact 6500461  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  6500460 cacacttgca 6500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 9498704 - 9498812
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||| ||| || |||||||||||    
T  9498704 cacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattctatctgatgtgagacatataact 9498802  T
Q  168 cacacttgca 177  Q
    |||| |||||    
T  9498803 cacatttgca 9498812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 26590916 - 26591068
Alignment:
Q  24 catccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataag 123  Q
    ||||||||||||||||| ||  ||| ||| || |||| ||| | |||||| |||| | |||| |||||||| ||| ||||| | ||||||||||||||||    
T  26590916 catccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttataag 26591015  T
Q  124 gttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    || ||| |||||||||||||| || |||||||| |||| ||| |||||||||||    
T  26591016 gtgttc-aacctttacttttcgattcgatatggaacatttaaatcacacttgca 26591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 15370207 - 15370092
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||  ||  ||||| |||||||||||||||||| | ||||| |||||||| || ||| |||| ||||||||||||||    
T  15370207 cacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaa-cctttactattttattcgatgtgggacatataact 15370109  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  15370108 cacacttgcacacaaca 15370092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 6500972 - 6500823
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||| ||| ||||||  ||| |||   |||||| ||| || |||| |||||||||||||||||| |||||| ||| |||||||||    
T  6500972 tccacatcgaggctagaataaccgcacaagtaagagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggt 6500873  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
     ||| |||||||||| || |||||||| | ||||||||||||||||||||||    
T  6500872 gttc-aacctttactattttatccgatgt-ggacatataactcacacttgca 6500823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 11417026 - 11417140
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||| | |||| ||||||||||| |||||| | |||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||||||    
T  11417026 tcacactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatataac 11417124  T
Q  167 tcacacttgcacacaaca 184  Q
    |  |||||||||||||||    
T  11417125 t--cacttgcacacaaca 11417140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 35150114 - 35150002
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| |||||  ||||| |||| ||||||||||||||| ||||| |||| ||| || |||||||| ||||||||||||||    
T  35150114 cacacttttacccaaaaccttaagacaatggatttatgggtc-tcttacttataaggtgttcaa-ccttgactcttttatccgatgtgggacatataact 35150017  T
Q  168 cacacttgcacacaa 182  Q
    |||||||||||||||    
T  35150016 cacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 3295073 - 3295176
Alignment:
Q  76 taccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttg 175  Q
    ||||| |||| | ||||||||| |||||| |||| ||||||||||||||| ||| |||||||||| || |||||||| |||||||||| |||||||||||    
T  3295073 tacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttc-aacctttactattttatccgatgtgggacatat-actcacacttg 3295170  T
Q  176 cacaca 181  Q
    ||||||    
T  3295171 cacaca 3295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 25328043 - 25327928
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||| |  |||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| | ||||||||||||    
T  25328043 cacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttc-aacttttactgttttatccgatgtaggacatataact 25327945  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||  ||||||||    
T  25327944 cacacttagacacaaca 25327928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 624346 - 624196
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  |||||||||| |||| |||   |||||| |||||| |||| | ||||| ||| |||||| |||| |||||||||||| ||    
T  624346 tccacatcgaggctagaacaaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgt 624247  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
     ||| |||||||||| || ||| | || ||||||||||||||||||||||||    
T  624246 gttc-aacctttactattttatacaatgtgggacatataactcacacttgca 624196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 31509710 - 31509616
Alignment:
Q  89 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||  ||||||| |||||||| ||  |||| |||  ||||||||||||||| || ||||||||||||||||||||||||||||    
T  31509710 aaggcaatgagtttatgagtcctctcacttataaagtgctcaa-cctccacttttctatccgatgtgagacatataactcacacttgcacacaaca 31509616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 3295408 - 3295508
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||  |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||| |||||| |||||||||| ||||||    
T  3295408 aaaccttaaggcaattggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtggaacatat-actcacacttccacaca 3295505  T
Q  182 aca 184  Q
    |||    
T  3295506 aca 3295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 27502105 - 27502194
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    ||||||||||  |||||| |||||||||||||||||||| || || |||||||| || ||||| || ||||||||||||||||||||||||    
T  27502105 ttaaggcaataggtttatgggtcctcttacttataaggtgtttaa-cctttactattttatccaatgtgggacatataactcacacttgca 27502194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 42508706 - 42508605
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||| ||||||  |||||||||||||| || | || || |||||||||||||||||||| ||||| |||||| ||||||||| |||||    
T  42508706 aaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaa-cctttacttttctatccgatgtgggatatataattcacacttgtacaca 42508608  T
Q  182 aca 184  Q
    |||    
T  42508607 aca 42508605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 12662661 - 12662817
Alignment:
Q  27 ccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggtt 126  Q
    ||||||||||| || ||  ||||||||||  ||||||    |||||| |||||| |||  ||||| |||||  ||||| |||  ||||||||||||  |     
T  12662661 ccacatcgaggctagaagaaccccacaagcaagaaaggcaccacactcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatg 12662760  T
Q  127 ttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||| |||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  12662761 ttcaa-cctttactattttatccgatgtgggacatataactcacacttgcacacaaca 12662817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 26074839 - 26074947
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||| ||||  |||||| ||||||| ||||||||  || ||||| |||||||| || |||||||| |||||||||||||||||||||    
T  26074839 ttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaa-cctttactcttttatccgatgtgggacatataactcacactt 26074937  T
Q  175 gcacacaaca 184  Q
    | ||||||||    
T  26074938 gtacacaaca 26074947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 26074395 - 26074320
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttg 175  Q
    |||||| |||||||||||||||||||| ||||| | |||| ||||||||| ||| ||||||||||||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatc-tttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 36521935 - 36522062
Alignment:
Q  57 gagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgg 156  Q
    |||| ||||| |||||| |||||| |||| ||||||||||  |||||| |||||||| | ||| |  || ||||| |||  ||||||||||| ||| |||    
T  36521935 gagagagatgacacactcttacccaaaaccttaaggcaattggtttatgggtcctctcatttaaagagtgttcaa-cctcaacttttctatctgatgtgg 36522033  T
Q  157 gacatataactcacacttgcacacaacac 185  Q
    |||||||||||||||||||| ||||||||    
T  36522034 gacatataactcacacttgcgcacaacac 36522062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 42405646 - 42405761
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||| |  ||||||  ||||| |||||| |||||| ||||| |||||||| || |||||||| | ||||||||||||    
T  42405646 cacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaa-cctttactattttatccgatgttggacatataact 42405744  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  42405745 cacacttgtacacaaca 42405761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 24489275 - 24489370
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
    ||||||||||| |||||| |||  ||||||| ||||||| || || ||||| |||||||||| ||| |||||||||||||||||||||| |||||||||    
T  24489275 ttaaggcaatgggtttatgggt--tcttactaataaggtgtttaa-ccttttcttttctatctgatgtgggacatataactcacacttgaacacaacac 24489370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 29549305 - 29549413
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| |||||| |||| |||||| |||| ||||||||||| ||| ||||  |||||||| || |||| ||||||| ||||||||||    
T  29549305 cacactcttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcat-cctttactattttatctgatatggaacatataact 29549403  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  29549404 cacacttgca 29549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 33747860 - 33747783
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||||||||||||| | ||||||||||||||| || ||  |||||||||| || |||||||| ||||||||||||    
T  33747860 ttaaggcaatgagtttatggatcctcttacttataaagtatt-taacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 2411114 - 2411010
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| |||| | |||| |||||||||| ||||||| ||| |||||||||| ||| | ||||| | ||||||| ||||||| || | |||||||||||||    
T  2411114 acactcttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaa-cttttacttctctatccaatgtaggacatataactc 2411016  T
Q  169 acactt 174  Q
    ||||||    
T  2411015 acactt 2411010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 301025 - 300954
Alignment:
Q  110 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaa 182  Q
    |||||||||||||||| ||||| |||||||| || |||| ||| ||||||||||||| |||||||| ||||||    
T  301025 ctcttacttataaggtattcaa-cctttactgttttatctgatgtgggacatataacccacacttgtacacaa 300954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 623948 - 623818
Alignment:
Q  46 accccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttct 145  Q
    |||||||||| |||| |||   |||||| |||| | |||| ||||||| || ||||||| | ||  ||||||| ||| || ||||| |||||||| || |    
T  623948 accccacaagtgagagagacaccacactcttactcaaaaccttaaggctataagtttatggctcaacttacttgtaaagtgttcaa-cctttactattat 623850  T
Q  146 atccgatatgggacatataactcacacttgca 177  Q
    ||||||| || |||||||||||||||||||||    
T  623849 atccgatgtgagacatataactcacacttgca 623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 36527202 - 36527248
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  36527202 acttttctatctgatgtgggacatataactcacacttgtacacaaca 36527248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 13785727 - 13785775
Alignment:
Q  136 ttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  13785727 ttactttt-tatccgatttgggacatataactcacacttccacacaacac 13785775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 15370552 - 15370447
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  |||||||||   ||| ||| | |||||| |||| | |||| ||||||| ||| |||||| ||||||||||||||||||||    
T  15370552 tccacatcgaggctagaacaaccccacaaacaagagagacgccacactcttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggt 15370453  T
Q  126 tttcaa 131  Q
     |||||    
T  15370452 gttcaa 15370447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 35150789 - 35150740
Alignment:
Q  135 tttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| || ||| |||| |||||||||||||||||||||||||||||||    
T  35150789 tttactcttttattcgatgtgggacatataactcacacttgcacacaaca 35150740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 35151080 - 35151031
Alignment:
Q  135 tttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| || ||| |||| |||||||||||||||||||||||||||||||    
T  35151080 tttactcttttattcgatgtgggacatataactcacacttgcacacaaca 35151031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 39309755 - 39309677
Alignment:
Q  105 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| |||||| || ||||| | |||||  || |||||||| |||||||||||||||| ||||| ||||||||    
T  39309755 tggtcctcttatttataatgtgttcaa-catttacccttttatccgatgtgggacatataactcatacttgtacacaaca 39309677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 7768925 - 7768852
Alignment:
Q  101 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttg 175  Q
    |||| |||||| ||||||||||||| ||||| |||||| | || |||||||| | ||| ||||||||||||||||    
T  7768925 ttatgggtccttttacttataaggtgttcaa-cctttattattttatccgatgtaggatatataactcacacttg 7768852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 42524760 - 42524719
Alignment:
Q  134 ctttacttttctatccgatatgggacatataactcacacttg 175  Q
    ||||||||||||||||||| || ||||||||| |||||||||    
T  42524760 ctttacttttctatccgatgtgagacatataattcacacttg 42524719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 5723917 - 5723949
Alignment:
Q  145 tatccgatatgggacatataactcacacttgca 177  Q
    |||||||| ||||||||||||||||||||||||    
T  5723917 tatccgatgtgggacatataactcacacttgca 5723949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 28531364 - 28531480
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  |||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||    
T  28531364 cacactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaa-cctttgcttttctatccgatgtgggacatataact 28531462  T
Q  168 cacacttgcacacaacac 185  Q
    ||||||||||||||||||    
T  28531463 cacacttgcacacaacac 28531480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 28254287 - 28254402
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||| |    
T  28254287 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaa-cctttacttttctatccgatgtgggacatataagt 28254385  T
Q  168 cacacttgcacacaaca 184  Q
    |||||| ||||||||||    
T  28254386 cacactggcacacaaca 28254402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 15880413 - 15880256
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| |||||  ||| ||||||  ||| ||| | |||||| |||||| |||| ||||||||||| |||||| ||||||||||||||||||||    
T  15880413 tccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggt 15880314  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| |||||||||| || |||||||| ||| |||||||||||||||||| ||||||||    
T  15880313 gttc-aacctttactcttttatccgatgtggaacatataactcacacttgtacacaaca 15880256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 36005888 - 36006044
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||||||||||  ||| ||| | |||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  36005888 tccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 36005987  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| ||| ||||| ||||||| |||| |||||||||||||||||||||| ||||||||    
T  36005988 gttc-aacttttac-tttctattcgatgtgggacatataactcacacttgtacacaaca 36006044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 41283525 - 41283633
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||||||||||||||||||||||    
T  41283525 cacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatatgggacatataact 41283623  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  41283624 cacacttgca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 962706 - 962591
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| ||||| |||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  962706 cacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaa-cctttacttttctatccgatgtgggacatataact 962608  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||| ||||||    
T  962607 cacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 40679657 - 40679795
Alignment:
Q  46 accccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttct 145  Q
    ||||||||||  ||| ||| | |||||| |||||| |||  ||||||| ||| |||||| ||| |||||||||||||||| ||||| |||| ||||||||    
T  40679657 accccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaaccctt-acttttct 40679755  T
Q  146 atccgatatgggacatataactcacacttgcacacaacac 185  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  40679756 atccgatatgggacatataactcacatttgcacacaacac 40679795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 42514799 - 42514641
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||||||||||  ||| ||| | |||||| |||||| |||  ||||||| ||| |||||| ||||||||||||||||||||    
T  42514799 tccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggt 42514700  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
     ||||| |||||||||||||||| ||| | |||||||||||||||||||||| |||||||    
T  42514699 gttcaa-cctttacttttctatctgatgtaggacatataactcacacttgcatacaacac 42514641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 36178655 - 36178763
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||||||    
T  36178655 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataact 36178753  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  36178754 cacacttgca 36178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 14745717 - 14745825
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||| || ||||||||||||||    
T  14745717 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatgtgggacatataact 14745815  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  14745816 cacacttgca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 37106296 - 37106188
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||| |||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||||||    
T  37106296 cacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgatgtgggacatataact 37106198  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  37106197 cacacttgca 37106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 6421493 - 6421378
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| | ||||||||||||||||  ||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||||||    
T  6421493 cacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttc-aacctttactcttttatccgatgtgggacatataact 6421395  T
Q  168 cacacttgcacacaaca 184  Q
    ||||||||  |||||||    
T  6421394 cacacttgtgcacaaca 6421378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 5542675 - 5542783
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||| ||||||||||  |||||| |||||||||||||||||||| ||||| |||||||| || ||| |||||||||||||||||||    
T  5542675 cacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaa-cctttactattttattcgatatgggacatataact 5542773  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  5542774 cacacttgca 5542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 16542538 - 16542442
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||||  ||||||||| ||||||||| ||||| |||||||| || |||||||| |||||| ||||||||||||||||||||||||    
T  16542538 ttaaggcaatgagtttataagtcctcttatttataaggtgttcaa-cctttactattttatccgatgtgggacttataactcacacttgcacacaaca 16542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 37106032 - 37105924
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  |||||||||||||||||| ||||| |||||||||||||| ||| |||||||||| || ||| |||| ||||||||||||||    
T  37106032 cacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttc-aacctttactattttattcgatgtgggacatataact 37105934  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  37105933 cacacttgca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 31468799 - 31468911
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||||| |||| |||||||||||||||||| ||||||||||    |||| | ||||| |||||||| || |||||||| |||||||||||||    
T  31468799 tcacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta----taagatattcaa-cctttactattttatccgatgtgggacatataac 31468893  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||||||||||||||||    
T  31468894 tcacacttgcacacaaca 31468911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 31899496 - 31899591
Alignment:
Q  88 taaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| ||| ||||||||||||||||| |||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttc-aacatttactattttatccgatgtggaacatataactcacactttcacacaaca 31899591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 33561490 - 33561616
Alignment:
Q  57 gagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgg 156  Q
    |||| |||| ||||||| |||||| |||| ||||| |||||||||||| |||||||| |||||||| || || || |||  ||||||||||| ||| |||    
T  33561490 gagagagatatcacactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaa-cctccacttttctatctgatgtgg 33561588  T
Q  157 gacatataactcacacttgcacacaaca 184  Q
     |||||||||||||||||||||||||||    
T  33561589 aacatataactcacacttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 38796299 - 38796383
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| |||||||||||||||||||| ||||| | |||||| || |||||||| |||||||||||||||||||||||||||||||    
T  38796299 gtttataggtcctcttacttataaggtgttcaa-catttactgttttatccgatgtgggacatataactcacacttgcacacaaca 38796383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 38796677 - 38796785
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| |||||||| |  |||||| |||||||||||||||||||| ||||| |||||| | || |||| ||| |||||||||||||||||||||    
T  38796677 ttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaa-cctttattgttttatcagatgtgggacatataactcacactt 38796775  T
Q  175 gcacacaaca 184  Q
    ||||||||||    
T  38796776 gcacacaaca 38796785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30323572 - 30323457
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| |||||||| |||| ||| || ||||| |||  | ||||||||| ||| |||||||||||||     
T  30323572 cacactcttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaa-cctccaattttctatctgatttgggacatataaca 30323474  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  30323473 cacacttgcacacaaca 30323457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 35580776 - 35580886
Alignment:
Q  70 cactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 169  Q
    |||| |||||| |||| ||||||||||| |||||| |||||||| ||||||||||| ||||| | |||| | || |||||||| ||||||||||||||||    
T  35580776 cactcttacccaaaaccttaaggcaatgggtttat-ggtcctctcacttataaggtgttcaa-catttattgttttatccgatgtgggacatataactca 35580873  T
Q  170 cacttgcacacaa 182  Q
    |||||||||||||    
T  35580874 cacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 37895111 - 37895226
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| ||||||  || || |||||| |||||||||||| | |||| ||||||||||||| ||||||||||||||    
T  37895111 cacactcttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaa-cttttatttttctatccgatgtgggacatataact 37895209  T
Q  168 cacacttgcacacaaca 184  Q
    || ||| ||||||||||    
T  37895210 caaactcgcacacaaca 37895226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 180
Target Start/End: Complemental strand, 7598684 - 7598606
Alignment:
Q  101 ttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacac 180  Q
    |||| |||||||||||||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaa-cctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 40733625 - 40733512
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||||||||||   |  |||||| |||||||||||||||||||| ||||| | ||||||||| |||| ||| ||||||||||||||    
T  40733625 cacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaa-catttacttttttatctgatgtgggacatataact 40733527  T
Q  168 cacacttgcacacaa 182  Q
    |||||||| ||||||    
T  40733526 cacacttgtacacaa 40733512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 5543048 - 5543156
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  ||||||||||  |||||| | |||||||||||||||||| ||||| |||||||| || |||| ||| ||||||||||||||    
T  5543048 cacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaa-cctttactattttatcggatgtgggacatataact 5543146  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  5543147 cacacttgca 5543156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 7598329 - 7598225
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||||| |||||||||| |||||||||| ||||||||| || || ||||||||||||||| |||| | | |||||||| ||||||||    
T  7598329 ttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaa-cctttacttttctattcgatgtagaacatataattcacactt 7598231  T
Q  175 gcacac 180  Q
    ||||||    
T  7598230 gcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 37632647 - 37632762
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||| |  ||| |||||| |||||||||||||||||  | | |||||||||||| || |||||||| | ||||||||||||    
T  37632647 cacactcttacccaaaaccttaaagttatgggtttatgggtcctcttacttataaaatgt-caaacctttactattttatccgatgtaggacatataact 37632745  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  37632746 cacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 12529092 - 12529193
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||||||||||||||||||||||  ||||||||||||||| ||| ||| || ||||||| || |||  ||| | |||||||||||||||||||||| |||    
T  12529092 aaactttaaggcaatgagtttatgagtcctcttacttatacggtgttc-aatctttactgttttatttgatgtaggacatataactcacacttgcataca 12529190  T
Q  182 aca 184  Q
    |||    
T  12529191 aca 12529193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 30313303 - 30313171
Alignment:
Q  50 cacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 149  Q
    |||||| |||| ||| | |||||| |||||| |||  |||||||||||||||| | |||||||| ||||||||| | ||||| |||  ||||||||||||    
T  30313303 cacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataag-tgttcaa-cctccacttttctatcc 30313206  T
Q  150 gatatgggacatataactcacacttgcacacaaca 184  Q
    ||| || |||||||||| ||| |||||||||||||    
T  30313205 gatgtgagacatataacacacgcttgcacacaaca 30313171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 1769973 - 1769889
Alignment:
Q  95 atgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacac 180  Q
    ||||||||||  ||||||||||||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||||||||||    
T  1769973 atgagtttatgagtcctcttacttataaggtgttcaa-cttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 36178320 - 36178427
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| |||||| |||| ||||| ||||| ||||||  |||| |||||||||||||| ||| | |||||||| || |||||||  |||||||||||||||    
T  36178320 acactcttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttcca-cctttactattttatccgaagtgggacatataactc 36178418  T
Q  169 acacttgca 177  Q
    |||||||||    
T  36178419 acacttgca 36178427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 33953819 - 33953937
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| |||||| ||| ||||||||||   |||||| |||||||| |||||||  || ||||| |||  ||||||||||| ||| |||||| |||||    
T  33953819 gtcacactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaa-cctccacttttctatctgatgtgggacttataa 33953917  T
Q  166 ctcacacttgcacacaacac 185  Q
    |||||| |||||||||||||    
T  33953918 ctcacatttgcacacaacac 33953937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 37894761 - 37894855
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaa 182  Q
    |||||||||||  |||||  ||| |||||||||||||||||| |  ||||||||||||||| | || |||||||||||||||||| ||||||||||    
T  37894761 ttaaggcaatggatttatgagtcttcttacttataaggtttttag-cctttacttttctattcaatgtgggacatataactcacatttgcacacaa 37894855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 6713070 - 6712969
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| |||| |||||  |||||| |||||||||||||||||||| ||||| | |||||| || |||||||| || ||||||||||||||||||| | |||    
T  6713070 aaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaa-catttactgttttatccgatgtgagacatataactcacacttgtataca 6712972  T
Q  182 aca 184  Q
    |||    
T  6712971 aca 6712969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 28254169 - 28254254
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 161  Q
    |||||| |||||||||||||| | ||||||  |||||||||||||||| || ||| |||||||||||||||||||||| || |||||    
T  28254169 ttaccctaaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttc-aacctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 29873569 - 29873702
Alignment:
Q  50 cacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 149  Q
    |||||| |||| ||| |||||||| |||| | |||| ||||||||||||||||||  ||||||  ||||||||  | ||| |||||  |||||||||||     
T  29873569 cacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttc-aacctccacttttctatct 29873667  T
Q  150 gatatgggacatataactcacacttgcacacaaca 184  Q
    ||| |||||||| |||| ||| |||||||||||||    
T  29873668 gatgtgggacatgtaacacacccttgcacacaaca 29873702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 14745344 - 14745452
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| ||||||| |||||| ||| | ||| |||| ||||| || ||| |||| ||||||||||||||    
T  14745344 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttc-aaccattactattttattcgatgtgggacatataact 14745442  T
Q  168 cacacttgca 177  Q
    |||| |||||    
T  14745443 cacagttgca 14745452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 15511545 - 15511658
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  ||||| ||||| |||||| ||||||||||||||||| || ||| |||||||||| || |||||| | || |||||||||||    
T  15511545 cacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttc-aacctttactcttttatccgttgtgtgacatataact 15511643  T
Q  168 cacacttgcacacaaca 184  Q
      |||||||||||||||    
T  15511644 --cacttgcacacaaca 15511658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 36785675 - 36785728
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  36785675 aacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 36785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 29676971 - 29676896
Alignment:
Q  108 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| || |||||||| || ||||||||||| || |||||||| ||||||||||||||||||| |||||||||||    
T  29676971 tcctctcacctataaggtgtt-aaacctttactcttttatccgatgtgggacatataactcacacctgcacacaaca 29676896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 40163461 - 40163520
Alignment:
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||    
T  40163461 ggtcatcttacttataaggtgttcaa-cctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 9231356 - 9231242
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| ||| || ||||||||||||  || ||| || | |||||||| ||||||  | ||||| |||||||||||||||| |||||| ||||||||||||    
T  9231356 acactcttaaccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaa-cctttacttttctatctgatatgagacatataactc 9231258  T
Q  169 acacttgcacacaaca 184  Q
    | |||| |||||||||    
T  9231257 atacttacacacaaca 9231242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 33954380 - 33954426
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  33954380 acttttctatctgatgtgggacatataactcacacttgcacacaaca 33954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 40733990 - 40733878
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| ||||||||||||  | || ||||  | ||||||||||||||||| || ||| ||||||| || ||| |||| ||||||||||||||    
T  40733990 cacactcttacccaaaactttaaggctgt-aggttatgagccctcttacttataaggtgtt-aaatctttactcttttattcgatgtgggacatataact 40733893  T
Q  168 cacacttgcacacaa 182  Q
    |||||||| ||||||    
T  40733892 cacacttgtacacaa 40733878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 23346345 - 23346227
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata-- 164  Q
    ||||||| |||||  |||| ||||||| ||| |||||| || ||||||| ||||||||| || || ||||||||||||||| |||| || ||||||||      
T  23346345 tcacactcttaccgaaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaa-cctttacttttctatacgatgtgagacatatata 23346248  T
Q  165 actcacacttgcacacaacac 185  Q
    ||||||||| |||||||||||    
T  23346247 actcacactcgcacacaacac 23346227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 29874073 - 29874185
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| ||||||||||| |||||| |||||||  | |||||| || ||||| |||  ||||||||||| ||| |||||||||||||     
T  29874073 cacactcttatccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaa-cctccacttttctatctgatgtgggacatataaca 29874171  T
Q  168 cacacttgcacaca 181  Q
    |||||||| |||||    
T  29874172 cacacttgtacaca 29874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 33731749 - 33731653
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 172  Q
    |||||| |||| ||||||||||  |||||| | ||||||||||||||||||  || |||||||||| || |||||||| || || |||||||||||||    
T  33731749 ttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctc-aacctttactcttttatccgatgtgagatatataactcacac 33731653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 5367563 - 5367448
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||  ||| ||| || | || ||||||||||||||| ||||| ||||| || || |||||||| |||||||||||  |    
T  5367563 cacactcttacccaaaaccttaaggttatgtgttcatggatcatcttacttataaggtgttcaa-cctttgctcttttatccgatctgggacatatatat 5367465  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  5367464 cacacttgtacacaaca 5367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 12910335 - 12910221
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| |||||| |||| ||||| |||||| |||||  ||| | | ||||||||||  ||||| ||| |||||||| ||||||| ||| |||||||||||    
T  12910335 acactcttacccaaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaa-cctgtacttttccatccgatgtggaacatataactc 12910237  T
Q  169 acacttgcacacaaca 184  Q
    | |||| |||||||||    
T  12910236 aaacttacacacaaca 12910221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 36178221 - 36178311
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac 159  Q
    |||||| |||||| |||  ||||||||||| |||||| ||| | |||||||||||||| ||| |||||||||| || |||||||| ||||||    
T  36178221 cacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttc-aacctttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 42515078 - 42515004
Alignment:
Q  114 tacttataaggttttcaaacctttacttttctatccgatatggg----acatataactcacacttgcacacaacac 185  Q
    |||||||||||| || || |||||||||||||||||||| ||||    ||||||||||||||| ||||||||||||    
T  42515078 tacttataaggtgtttaa-cctttacttttctatccgatgtgggacatacatataactcacacctgcacacaacac 42515004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 6421350 - 6421297
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| || |||||||| |||||||||||||| ||||||| ||||||||    
T  6421350 aacctttactcttttatccgatgtgggacatataacttacacttgtacacaaca 6421297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 6422218 - 6422126
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacat 161  Q
    |||||| |||||  |||| ||||||| ||| |||||| |||||||||| |||||| || ||||| ||||||||||| |||| ||| ||||||||    
T  6422218 cacactcttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaa-cctttacttttttatctgatgtgggacat 6422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 16590977 - 16590881
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttct-atccgatatgggacatataactcacacttgcacac 180  Q
    |||| ||||||||||| |||||| |||||||||||||      | ||||| ||||||||||| | ||  ||| |||||||||||||||||||||||||||    
T  16590977 aaaccttaaggcaatgtgtttatgggtcctcttactt------tgttcaa-cctttactttttttatttgatgtgggacatataactcacacttgcacac 16590885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 43443103 - 43443147
Alignment:
Q  140 ttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||||    
T  43443103 ttttctatctgatgtgggacatataacttacacttgcacacaaca 43443147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 3673117 - 3673078
Alignment:
Q  145 tatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  3673117 tatccaatgtgggacatataactcacacttgcacacaaca 3673078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 31259666 - 31259784
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc---gatatgggacatata 164  Q
    |||||| |||||| |||| ||||||  ||  |||||| |||| ||||||||||||||| ||  |||||||||| || |||||   ||| || ||||||||    
T  31259666 cacactcttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgtt-gaacctttactcttttatccgatgatgtgagacatata 31259764  T
Q  165 actcacacttgcacacaaca 184  Q
    |||| ||||| |||||||||    
T  31259765 actcgcacttacacacaaca 31259784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 29676622 - 29676543
Alignment:
Q  89 aaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 169  Q
    |||||||||||||||| ||| |||| |||||||| || ||| || ||||||| || ||||| || || |||||||||||||    
T  29676622 aaggcaatgagtttatgggttctctcacttataatgtgttc-aatctttactcttttatccaatgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 9608845 - 9608738
Alignment:
Q  76 taccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttg 175  Q
    ||||| |||| ||||||  ||| |||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9608845 tacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaa-cctttacttttctatccgatatgggacatataactcacacttg 9608747  T
Q  176 cacacaaca 184  Q
    |||||||||    
T  9608746 cacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 3038298 - 3038455
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| ||||| |||||| |||||| |||| ||||||||||| |||||| |||||| |||||||||| ||    
T  3038298 tccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagt 3038397  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| |||||||||| || |||||||| |||||||||||||||||||||| ||||||||    
T  3038398 gttc-aacctttactattttatccgatgtgggacatataactcacacttgtacacaaca 3038455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 8918772 - 8918929
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    ||||||||||||||||||  ||| |||| |  ||||||| |||||||| |||||| |||| ||||| ||||  |||||| ||||||||||||||||| ||    
T  8918772 tccacatcgaggttaaaacaaccacacacgcaagaaagacgtcacactcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagt 8918871  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| |||||||||| | ||||| ||| |||||||| ||||||||||||||||||||||    
T  8918872 gttc-aacctttactctgctatctgatgtgggacatgtaactcacacttgcacacaaca 8918929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 41972252 - 41972151
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||||||| ||||||| |||||| |||||| | ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41972252 aaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaa-cctttacttttctatccgatgtgggacatataactcacacttgcacaca 41972154  T
Q  182 aca 184  Q
    |||    
T  41972153 aca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 34835317 - 34835205
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| ||||||||||||||    
T  34835317 cacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatcggatgtgggacatataact 34835219  T
Q  168 cacacttgcacaca 181  Q
    ||| |||| |||||    
T  34835218 cacccttgtacaca 34835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 9309463 - 9309348
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| | || |||||||||||||||||  |||||||||||||||||||| ||||| | |||||| || |||||||| ||||||||||||||    
T  9309463 cacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaa-catttactcttttatccgatgtgggacatataact 9309365  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  9309364 cacacttgcacacaaca 9309348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 177
Target Start/End: Complemental strand, 3669857 - 3669687
Alignment:
Q  6 gaggggagccaggagggtcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttatt 105  Q
    ||||||||| ||| ||  |||||||||||||| || ||  ||| ||||||  ||| |||   |||||| |||||| |||| ||||||||||||||||||     
T  3669857 gaggggagctagggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatg 3669758  T
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
     ||||||||||||||||||| ||| |||||||||| || |||| ||| ||||||||||||||||||||||||    
T  3669757 agtcctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataactcacacttgca 3669687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 25561859 - 25561981
Alignment:
Q  62 agatgtcacactgttaccccaaa-ctttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggaca 160  Q
    |||||||||||| |||||||||| | ||||| |||||||||||| |||||||||||||||||||| ||| ||| |||||| || |||||||| |||||||    
T  25561859 agatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttc-aacgtttactcttttatccgatgtgggaca 25561957  T
Q  161 tataactcacacttgcacacaaca 184  Q
    ||||||||||||||| | ||||||    
T  25561958 tataactcacacttgtagacaaca 25561981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 147559 - 147444
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||||||||||||||  |||||| |||||||||| ||||||||| ||| |||||||||| || |||||||| ||||||||||||||    
T  147559 cacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttc-aacctttactcttttatccgatgtgggacatataact 147461  T
Q  168 cacacttgcacacaaca 184  Q
    ||||||| ||| |||||    
T  147460 cacacttacacgcaaca 147444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 40518692 - 40518577
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| |||||| |||| ||||| || || |||||| |||||||||| ||||||||| ||||| |||||||||||||||| ||| ||||||||||||    
T  40518692 gtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaa-cctttacttttctatctgatgtgggacatataa 40518594  T
Q  166 ctcacacttgcacacaa 182  Q
    |||||||||| ||||||    
T  40518593 ctcacacttgaacacaa 40518577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 45121960 - 45122070
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    ||||||||||||| |||  ||||||||||||||||||  |||||||||||||||| || ||| |||||||||| || ||| |||| ||||||||||||||    
T  45121960 cacactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttc-aacctttactattttatgcgatgtgggacatataact 45122058  T
Q  168 cacacttgcaca 179  Q
    ||||||||||||    
T  45122059 cacacttgcaca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 45122107 - 45122220
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||  ||||||||||| ||| |||||||||||||||| ||||| |||||||| || |||||||| || |||||||||||    
T  45122107 cacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaa-cctttactattttatccgatgtgagacatataact 45122205  T
Q  168 cacacttgcacacaa 182  Q
    |||||||||||||||    
T  45122206 cacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 34835029 - 34834869
Alignment:
Q  23 tcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataa 122  Q
    ||||||||||||||| || ||  ||| ||||||  ||| |||   |||||| |||||| |||| ||||||||||||||||||  ||| ||||||||||||    
T  34835029 tcatccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataa 34834930  T
Q  123 ggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||| || || |||||||| || ||||| || |||||||||||||||||||||| ||||||||    
T  34834929 ggtgtttaa-cctttactattttatccaatgtgggacatataactcacacttgtacacaaca 34834869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 34835583 - 34835470
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc-cgatatgggacatataac 166  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||  ||  |||||||||||||    
T  34835583 cacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgtt-aaacctttactattttatcgggacgtgggacatataac 34835485  T
Q  167 tcacacttgcacaca 181  Q
    |||| |||| |||||    
T  34835484 tcacccttgtacaca 34835470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 34835849 - 34835736
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc-cgatatgggacatataac 166  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||  ||  |||||||||||||    
T  34835849 cacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgtt-aaacctttactattttatcgggacgtgggacatataac 34835751  T
Q  167 tcacacttgcacaca 181  Q
    |||| |||| |||||    
T  34835750 tcacccttgtacaca 34835736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 1013921 - 1014029
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| | ||||| |||||||||| ||||||||||||||||||||||| ||| ||| ||| |||||| || |||||||| ||| ||||||||||    
T  1013921 cacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttc-aacttttactattttatccgatgtggaacatataact 1014019  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  1014020 cacacttgca 1014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 3670168 - 3670060
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||| |||  |||||| ||||||| |||||||||||| || ||||||||||| || |||||||| ||||||||||||||    
T  3670168 cacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgtt-aaacctttactattttatccgatgtgggacatataact 3670070  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  3670069 cacacttgca 3670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 4154716 - 4154832
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||  |||||||||||||| |||||| | |||||||| || ||||| |||  ||||||||||| ||| ||||||||||||||    
T  4154716 cacactcttacccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaa-cctccacttttctatcagatgtgggacatataact 4154814  T
Q  168 cacacttgcacacaacac 185  Q
    ||||||||||||||||||    
T  4154815 cacacttgcacacaacac 4154832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 6876912 - 6877028
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac-atataac 166  Q
    |||||| |||||| ||||  |||| |||||||| ||| |||| ||||| ||||||||| ||||| ||||||||||| |||||||| |||||| |||||||    
T  6876912 cacactcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaa-cctttacttttttatccgatgtgggactatataac 6877010  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||||||||||||||||    
T  6877011 tcacacttgcacacaaca 6877028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 1513923 - 1514078
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||| |||||||| |  ||| ||||  |||||| |||||| |||| ||||||  ||| |||||  ||||||||||||||||||||    
T  1513923 tccacatcgaggctagaataaccccacatgtaagagagataccacacttttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggt 1514022  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaa 182  Q
     ||| |||||||||| || |||||||| ||||| |||||||||| ||||| ||||||    
T  1514023 gttc-aacctttactcttttatccgatgtgggatatataactcatacttgtacacaa 1514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30359379 - 30359264
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||| ||| |||||| ||||||||| |||||||||| ||||| | |||||| || |||||||| || |||||||||||    
T  30359379 cacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaa-catttactcttttatccgatgtgagacatataact 30359281  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  30359280 cacacttgtacacaaca 30359264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 33113417 - 33113532
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  |||||||||||||||||| ||||||||||||||||||   ||| |||||||||| || |||||||| | ||||||||||||    
T  33113417 cacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttc-aacctttactattttatccgatgtaggacatataact 33113515  T
Q  168 cacacttgcacacaaca 184  Q
    || ||||| ||||||||    
T  33113516 caaacttgtacacaaca 33113532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 5420745 - 5420644
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||||||| ||||||  ||||||||||||||||| | ||||| |||||||| ||||||||||| ||||||||||||  |||||||||| |||    
T  5420745 aaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaa-cctttactattctatccgatgtgggacatataatacacacttgcataca 5420647  T
Q  182 aca 184  Q
    |||    
T  5420646 aca 5420644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 1014295 - 1014403
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| ||||||||||| || |||||||  |||||||||||||||||||| ||| |||||||||| || |||| ||| |  |||||||||||    
T  1014295 cacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtatgacatataact 1014393  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  1014394 cacacttgca 1014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 43398132 - 43398225
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctc---ttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacact 173  Q
    ||||||||||||||||| ||||| |||||||   ||| ||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||    
T  43398132 aaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaa-cctttacttttctatccgatatgagatatataactcacact 43398225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 9620745 - 9620841
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||||||||| |||||||| |||||||| ||  |||| | | |||||||||||| | | || ||||||||||||||||||||||||||||    
T  9620745 ttaaggcaatgagtttatgggtcctctcacttataaagtgatcaa-cttctacttttctatctgttgtgagacatataactcacacttgcacacaaca 9620841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 70322 - 70425
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| |||||  |||| |||||||| || |||||| |||||||||||||||||| | ||| ||| |||||| || |||||||| ||||||||||||    
T  70322 gtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttc-aacatttactcttttatccgatgtgggacatataa 70420  T
Q  166 ctcac 170  Q
    |||||    
T  70421 ctcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 30441193 - 30441081
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataa----ggttttcaaacctttacttttctatccgatatgggacatat 163  Q
    |||||| |||||| |||| ||||||||||| |||||| || ||||||||||||||    ||| ||||| |||||||| || || ||||| ||||||||||    
T  30441193 cacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaa-cctttactattttagccgatgtgggacatat 30441095  T
Q  164 aactcacacttgca 177  Q
    ||||||||||||||    
T  30441094 aactcacacttgca 30441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 40518179 - 40518062
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttac--ttttctatccgatatgggacatataa 165  Q
    |||||| |||||| |||| |||||||| || |||||| |||||  ||||||||||||| ||| |||||||||  |||| ||||| || ||| ||||||||    
T  40518179 cacactcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttc-aacctttacttttttttatccaatgtggaacatataa 40518081  T
Q  166 ctcacacttgcacacaaca 184  Q
    |||||||||| ||||||||    
T  40518080 ctcacacttgaacacaaca 40518062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 40579556 - 40579662
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||| |||| ||||| ||||||| |||||||||||||||||||| ||| |||||||||| || ||||| |||||  |||||||| |    
T  40579556 cacactcttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccaatatgaaacatataatt 40579654  T
Q  168 cacacttg 175  Q
    ||||||||    
T  40579655 cacacttg 40579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 4154350 - 4154445
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||||||||| |||| ||| |||||||| || ||||| |||  ||||||||||| ||| | |||||||||||||||| ||||||||||||    
T  4154350 ttaaggcaatgagtttatgggtc-tctcacttataaagtgttcaa-cctccacttttctatctgatgtaggacatataactcacatttgcacacaaca 4154445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 18372787 - 18372859
Alignment:
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcaca 179  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| || |||||||||||||||||| ||||    
T  18372787 ggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgtgacatataactcacactttcaca 18372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 5915975 - 5915865
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| ||||||    ||||||| || ||  || |||||| ||| ||||| || | ||||||||||||    
T  5915975 cacactcttacccaaaaccttaaggcaatgagtttatgggtcct----cttataaagtgtt--aaactttacatttttatccaatgtaggacatataact 5915882  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  5915881 cacacttgcacacaaca 5915865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 9482676 - 9482755
Alignment:
Q  90 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 170  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||| || ||| |||||||||||||    
T  9482676 aggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatcccatgtggaacatataactcac 9482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 9483237 - 9483320
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 152  Q
    |||||| |||||| |||| ||||| ||||| |||||| |||||||||||||||||||| ||| |||||||||| || ||||||||    
T  9483237 cacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 9507890 - 9507770
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttact---tttctatccgatatg--ggacata 162  Q
    |||||| |||||| |||| |||||| |||| ||||||  ||||||||||||||||||| ||| ||||||||||    || ||||| |||||  ||| |||    
T  9507890 cacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattc-aacctttactgtacttttatccaatatggaggagata 9507792  T
Q  163 taactcacacttgcacacaaca 184  Q
    ||||||||||||||||||||||    
T  9507791 taactcacacttgcacacaaca 9507770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30359717 - 30359602
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  ||||||  ||| ||||||  ||||||||||||||||||| ||||| | |||||| || |||| ||| || |||||||||||    
T  30359717 cacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaa-cttttactcttttatctgatgtgagacatataact 30359619  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  30359618 cacacttgtacacaaca 30359602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 45122724 - 45122649
Alignment:
Q  76 taccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgat 152  Q
    ||||| |||| ||||| |||||||||||| |||||||||||||||||||| ||| |||||||||| || ||||||||    
T  45122724 tacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttc-aacctttactattttatccgat 45122649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 18372044 - 18372142
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||| ||||||||||||| | |||||||||||||||||| ||| |||||||||| || |||  ||| ||| ||||||||||    
T  18372044 cacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttc-aacctttactattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 41416252 - 41416322
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcac 170  Q
    |||||| | |||||||||||||||||| ||||| |||||||| || |||||||| |||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 9309065 - 9308969
Alignment:
Q  90 aggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatg--ggacatataactcacacttgcacacaacac 185  Q
    |||||||| |||||| |||||||||||||||||  | ||||| | |||||| || |||| ||| ||  ||||||||||||||||||||||||||||||    
T  9309065 aggcaatgggtttatgggtcctcttacttataacatgttcaa-cttttactcttttatctgatgtgtaggacatataactcacacttgcacacaacac 9308969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 18373004 - 18373085
Alignment:
Q  91 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacact 173  Q
    ||||||||||||||  ||||||||| ||||||||| ||| |||||||||| || |||||||  |||||||||||| |||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttc-aacctttactattttatccgaagtgggacatataaatcacact 18373085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 37544498 - 37544655
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  |||||||   |||||| |||||| |||| |||| | ||||  ||||| ||||||||| ||||||| ||    
T  37544498 tccacatcgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgt 37544597  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||||| |||||||| || |||||||| || ||| |||||||||||||||  |||||||    
T  37544598 gttcaa-cctttactattttatccgatgtgcgacttataactcacacttgtgcacaaca 37544655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 45121664 - 45121820
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  |||||| |||  ||| |||| ||||||| |||| | |||| |||||||  |  |||||| | ||||||||||||||||||    
T  45121664 tccacatcgaggctagaacaaccccataagtaagagagatatcacactcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataaggt 45121763  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
      || |||||||||| || |||||||| ||||||| | |||||||||||| ||||||||    
T  45121764 gatc-aacctttactcttttatccgatgtgggaca-acaactcacacttgtacacaaca 45121820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 45123052 - 45123002
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  45123052 aacctttactattttatccgatgtgggacatataactcacacttgcacaca 45123002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 147871 - 147822
Alignment:
Q  135 tttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  147871 tttacttttttatcagatgtgggacatataactcacacttgcacacaaca 147822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 18372344 - 18372416
Alignment:
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcaca 179  Q
    |||| ||||||||||||||| ||||| |||||||| || |||||||| || |||||||||||||||||| ||||    
T  18372344 ggtcttcttacttataaggtgttcaa-cctttactattttatccgatgtgagacatataactcacactttcaca 18372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 6731950 - 6731904
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||    
T  6731950 aacctttactattttatccgatgtgggacatataactcacacttgca 6731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 177
Target Start/End: Original strand, 20870561 - 20870733
Alignment:
Q  6 gaggggagccaggagggtcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttatt 105  Q
    ||||||||||||||||  | |||| ||| |||||| ||  ||| ||||||  ||| |||   |||||| ||| || |||  |||||||| || ||||||     
T  20870561 gaggggagccaggaggaccgtccatatcaaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatg 20870660  T
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggac--atataactcacacttgca 177  Q
    |||||||||||||||||| | ||| |||||||||| || |||| ||| ||| ||  ||||||||||||||||||    
T  20870661 ggtcctcttacttataagatgttc-aacctttactattttatctgatgtggaacatatataactcacacttgca 20870733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 8794180 - 8794104
Alignment:
Q  107 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||| | ||||| | |||| | || |||||||| || ||||||||||||||||||| ||||||||    
T  8794180 gtcctcttacttataagatgttcaa-catttattcttttatccgatgtgagacatataactcacacttgtacacaaca 8794104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 18380067 - 18380171
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| | |||| |||||| | || |||||| || || |||||||||||||| ||||| |||||||| || ||| |||| ||||| ||||||||    
T  18380067 cacactcttactcaaaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaa-cctttactattttattcgatgtgggatatataact 18380165  T
Q  168 cacact 173  Q
    ||||||    
T  18380166 cacact 18380171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 25561736 - 25561792
Alignment:
Q  110 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  25561736 ctcttacttataaggtgttcaa-cctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 33832055 - 33831971
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| ||||||||||||||||| || ||||| | | ||||||||| | | |  || ||||||||||||||||||||||||||||    
T  33832055 gtttataggtcctcttacttataaagtgttcaa-cttctacttttctcttcaacgtgagacatataactcacacttgcacacaaca 33831971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 9609193 - 9609114
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatc 148  Q
    |||||| |||||  |||| ||||||| ||| |||||| |||| ||||||||||||| | ||| ||||||||||||||||||    
T  9609193 cacactcttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttc-aacctttacttttctatc 9609114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 18372676 - 18372758
Alignment:
Q  91 ggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttg 175  Q
    ||||||| ||||||  |||||||||||||||| || ||| |||||||||| || ||||||| |||| |||||||| |||||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttataa-gtgttc-aacctttactattttatccgaaatggaacatataaatcacacttg 18372758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 18645712 - 18645752
Alignment:
Q  144 ctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  18645712 ctatccgatgtgagacatataactcacacttgcacacaaca 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 43274829 - 43274944
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| | |||| ||||| ||||  |||||| |||||||||||||||||  | ||| |||||||||| || |||| ||| ||  ||||||||||    
T  43274829 cacactcttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattc-aacctttactcttttatctgatgtgaaacatataact 43274927  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||  ||||||||    
T  43274928 cacacttatacacaaca 43274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 18372485 - 18372531
Alignment:
Q  133 cctttacttttctatccgatatgggacatataactcacacttgcaca 179  Q
    |||||||| || |||||||| ||||||||||||||||||||| ||||    
T  18372485 cctttactattttatccgatgtgggacatataactcacactttcaca 18372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 20995520 - 20995566
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| |||| ||| || ||||||||||||||||||||||||||||    
T  20995520 acttttttatctgatgtgagacatataactcacacttgcacacaaca 20995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 12283915 - 12283867
Alignment:
Q  135 tttacttttctatccgatatgggacatataactcacacttgcacacaac 183  Q
    ||||||||| |||| ||  |||||||||||||| |||||||||||||||    
T  12283915 tttacttttttatctgacgtgggacatataacttacacttgcacacaac 12283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 32305566 - 32305503
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccga 151  Q
    |||||| |||| |||||| |||| ||||||||||||||| ||| |||||||||| || |||||||    
T  32305566 ttaaggtaatgggtttataggtcttcttacttataaggtgttc-aacctttactattttatccga 32305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 12114612 - 12114727
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||    
T  12114612 cacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaa-cctttacttttctatccgatgtgggatatataact 12114710  T
Q  168 cacacttgcacacaaca 184  Q
     ||||||||||||||||    
T  12114711 tacacttgcacacaaca 12114727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 21832395 - 21832509
Alignment:
Q  70 cactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 169  Q
    |||| |||||| |||| ||||||| ||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||    
T  21832395 cactcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaa-cctttacttttctatccaatgtgggacatataactca 21832493  T
Q  170 cacttgcacacaacac 185  Q
    |||||||||| |||||    
T  21832494 cacttgcacataacac 21832509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 15773004 - 15772851
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    ||||||||||||||| ||  ||| ||||||  ||| |||   |||||| ||| || |||| |||| ||||||||||||| ||||||||||||||||||||    
T  15773004 tccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggt 15772905  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacac 180  Q
     ||||| | |||||| || ||||||||||||||||||||||||||||||||||||    
T  15772904 gttcaa-catttactcttttatccgatatgggacatataactcacacttgcacac 15772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 25739433 - 25739590
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || || |||| ||||||  ||| ||| |||||||| |||||| |||| | || ||||||||||||| |||||||||||||||| | |    
T  25739433 tccacatcgaggctagaactaccgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgat 25739532  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||| ||| |||||| || |||||||| |||||||||||||||||||||||||||||||    
T  25739533 gttc-aacttttactattttatccgatgtgggacatataactcacacttgcacacaaca 25739590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 35946630 - 35946515
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||| | |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||    
T  35946630 cacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaa-cctttactgttttatccgatgtgggacatataact 35946532  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  35946531 cacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 43346841 - 43346956
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||||||||||||| ||| |||||||||||||||| ||| |||||||||| || |||| ||| ||||||||||||||    
T  43346841 cacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttc-aacctttactattttatctgatgtgggacatataact 43346939  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  43346940 cacacttgtacacaaca 43346956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 29644910 - 29645067
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| |||||  ||| || |||  ||| ||| | |||||| |||||| |||| ||||| ||||| |||||| ||||||||||||||||||||    
T  29644910 tccacatcgaggctaaaacaaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggt 29645009  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     || || |||||||| || |||||||| |||||||||||||| ||||||||||||||||    
T  29645010 gtttaa-cctttactcttttatccgatgtgggacatataacttacacttgcacacaaca 29645067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 33803260 - 33803417
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||||||  ||| | |||||| |||||| | || |||| |||||| |||||| |||||||||||||||| |||    
T  33803260 tccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggt 33803359  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||||| |||||||| || |||||||| |||||||||||||||||| ||||||||||||    
T  33803360 gttcaa-cctttactattttatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 15773301 - 15773185
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||||| |||||||||||||||||| ||||  ||||||||||||||||| | ||| ||| |||||| || ||| |||| |||||||||||||    
T  15773301 tcacactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttc-aacttttactcttttattcgatgtgggacatataac 15773203  T
Q  167 tcacacttgcacacaaca 184  Q
    ||||||||||||||||||    
T  15773202 tcacacttgcacacaaca 15773185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 22304677 - 22304569
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||||||| ||||||||||| ||    
T  22304677 cacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattc-aacctttactattttatccgatgtgggacatatagct 22304579  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  22304578 cacacttgca 22304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 184
Target Start/End: Original strand, 42342377 - 42342553
Alignment:
Q  7 aggggagccaggagggtcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattg 106  Q
    |||||||||||| ||  | ||||||| |||| || ||  ||| ||||||  ||| ||| |||||||| |||||| |||| ||||| |||||  ||||| |    
T  42342377 aggggagccagggggaccgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgg 42342476  T
Q  107 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||||||| || || |||||||| || |||| ||| |||||||||||||||||||||||||||||||    
T  42342477 gtcctcttacttataaggtgttgaa-cctttactcttttatcggatgtgggacatataactcacacttgcacacaaca 42342553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 32462950 - 32463066
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| | |||| ||||||||||| ||||||  ||| ||||||||||||||| ||||| | |||||| ||||||||||| ||||||||||||||    
T  32462950 cacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataact 32463049  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  32463050 cacacttgtacacaaca 32463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 37990689 - 37990804
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||||||||||  ||||||||||||||||||| ||| ||| |||||| || |||||||| ||| ||||||||||    
T  37990689 cacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttc-aacatttactattttatccgatgtggaacatataact 37990787  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  37990788 cacacttgtacacaaca 37990804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 37991027 - 37991142
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||||| || ||||| || || |||||||||||    
T  37991027 cacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttc-aacctttactattttatccaatgtgagacatataact 37991125  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  37991126 cacacttgtacacaaca 37991142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 181
Target Start/End: Original strand, 1634366 - 1634477
Alignment:
Q  70 cactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 169  Q
    |||| |||||| |||| ||||| ||||| |||||| ||||||||||||||||| || || || | |||| ||||||||||||| ||||||||||||||||    
T  1634366 cactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactca 1634465  T
Q  170 cacttgcacaca 181  Q
    ||||||||||||    
T  1634466 cacttgcacaca 1634477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 29644631 - 29644744
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| ||||| |||||| ||| |||||||||||||||| ||||| |||||||| ||  ||||||| ||||||||||||||    
T  29644631 cacactcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaa-cctttactctttaatccgatgtgggacatataact 29644729  T
Q  168 cacacttgcacacaa 182  Q
    |||||||||||||||    
T  29644730 cacacttgcacacaa 29644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 52634785 - 52634669
Alignment:
Q  66 gtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataa 165  Q
    |||||||| |||||| |||| ||||||||||| |||||| |||| ||||||||||||||  ||||| |||||||| || |||||||| ||||||||||||    
T  52634785 gtcacactcttacccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaa-cctttactgttttatccgatgtgggacatataa 52634688  T
Q  166 ctcacacttgcacacaaca 184  Q
    |||||||||| ||||||||    
T  52634687 ctcacacttgtacacaaca 52634669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 33175711 - 33175829
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttatt---ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatata 164  Q
    |||||| |||||| |||| ||||||| |||||||||||   ||| |||||||||||||||| ||||| |||||||||||||||| ||| || ||||||||    
T  33175711 cacactcttacccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaa-cctttacttttctatctgatgtgagacatata 33175809  T
Q  165 actcacacttgcacacaaca 184  Q
    ||||||||||| ||||||||    
T  33175810 actcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 41359774 - 41359926
Alignment:
Q  27 ccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggtt 126  Q
    ||||||||||| || ||  ||| |||||| |||| ||| | |||| | |||||| |||| ||||||||||| |||||| ||||||||||||||||||||     
T  41359774 ccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggta 41359873  T
Q  127 ttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||| |||||||||| || |||||||| ||||    |||||||||||||||||||||||    
T  41359874 ttc-aacctttactattgtatccgatgtggg----ataactcacacttgcacacaaca 41359926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 45901822 - 45901706
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||  |||||||||||| ||||||||||  ||||||||||||||||||| ||||| | |||  | || |||||||| ||||||||||||||    
T  45901822 cacactcttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataact 45901723  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  45901722 cacacttgtacacaaca 45901706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 49336737 - 49336852
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||||||  ||||||||| | ||| |||||| ||||||||||||||||||||  |||| |||||||||||||||||||| || ||||| |||||    
T  49336737 cacactcttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaa-cctttacttttctatccgatgtgagacatgtaact 49336835  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  49336836 cacacttgtacacaaca 49336852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 39934960 - 39935104
Alignment:
Q  23 tcatccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataa 122  Q
    ||||||||||||||| || ||  ||| ||||||  ||| |||  ||||||| |||| | |||||||||||||||| |||||| | |||||||||||||||    
T  39934960 tcatccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataa 39935059  T
Q  123 ggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||| ||| |||||||||| || |||||||| | |||||||||||||    
T  39935060 ggtgttc-aacctttactcttttatccgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 8328012 - 8327897
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||| |  |||||| ||| |||||||||||||| | ||||  |||||||| || |||||||| ||||||||||||||    
T  8328012 cacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcat-cctttactcttttatccgatgtgggacatataact 8327914  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  8327913 cacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 54017866 - 54017981
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||  |  ||||||  ||||||||||||||||||| ||||| |||||||| || |||||||| | ||||||||||||    
T  54017866 cacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaa-cctttactcttttatccgatgtaggacatataact 54017964  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  54017965 cacacttgcacacaaca 54017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 9240238 - 9240141
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaacac 185  Q
    |||||| ||||  ||||| |||||||||||||||||||| ||||  | ||||||| |||||||||| ||| ||||||||||||||||||||||||||||    
T  9240238 ttaaggtaatggatttatgggtcctcttacttataaggtgttcag-cttttacttctctatccgatgtggaacatataactcacacttgcacacaacac 9240141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 184
Target Start/End: Complemental strand, 32589809 - 32589697
Alignment:
Q  70 cactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactca 169  Q
    |||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||| | || ||||  || |||||||||| |||||    
T  32589809 cactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttattattttatcttatgtgggacatat-actca 32589712  T
Q  170 cacttgcacacaaca 184  Q
    |||||||||||||||    
T  32589711 cacttgcacacaaca 32589697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 42342098 - 42342255
Alignment:
Q  26 tccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||||||||| || ||  ||| ||||||  ||| ||| | |||||| |||||| |||| ||||||||||||||||||  ||||||||||||||||||     
T  42342098 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggc 42342197  T
Q  126 tttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
     ||  ||| |||||| || |||||||| ||| |||||| | ||||||||||||||||||    
T  42342198 att-gaacatttactcttttatccgatgtggaacatatgaatcacacttgcacacaaca 42342255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 39389178 - 39389070
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||| ||||| |||||| |||||||||| || |||||| ||||| |||||||| || |||||||| | ||||||||||||    
T  39389178 cacactcttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaa-cctttactattttatccgatgtaggacatataact 39389080  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  39389079 cacacttgca 39389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 184
Target Start/End: Complemental strand, 25755546 - 25755387
Alignment:
Q  24 catccacatcgaggttaaaattaccccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataag 123  Q
    |||||||||||||| || ||  ||| ||||||  ||| ||| | |||||| ||||||  ||||||| | |||||  |||||  |||||||||||||||||    
T  25755546 catccacatcgaggctagaacaaccgcacaagcaagagagacgccacacttttacccacaactttaggacaatggatttatgagtcctcttacttataag 25755447  T
Q  124 gttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    || ||||| |||||||| || |||| ||| || ||||||||||||||||||| ||||||||    
T  25755446 gtattcaa-cctttactcttttatctgatgtgagacatataactcacacttgtacacaaca 25755387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 31190087 - 31190010
Alignment:
Q  106 ggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||| ||||||||||| ||||| |||||||| || |||||||| |||||||||| ||||||||||||||||||||    
T  31190087 ggtcctctaacttataaggtgttcaa-cctttactcttttatccgatgtgggacatatcactcacacttgcacacaaca 31190010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 45395681 - 45395818
Alignment:
Q  46 accccacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttct 145  Q
    |||||||||| |||| |||   |||||| |||||| |||| ||||| ||||| |||||| | ||||||||||||||| || || || |||||||| || |    
T  45395681 accccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaa-cctttactctttt 45395779  T
Q  146 atccgatatgggacatataactcacacttgcacacaaca 184  Q
    || |||| ||||| |||||||| ||||||||||||||||    
T  45395780 attcgatgtgggatatataacttacacttgcacacaaca 45395818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 4823763 - 4823655
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||  |||||||||||||||||| ||||||| |||||||||||| ||  ||| |||||| || |||||||| || ||| |||||||    
T  4823763 cacactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtt-taacttttactattttatccgatgtgagacttataact 4823665  T
Q  168 cacacttgca 177  Q
    ||||||||||    
T  4823664 cacacttgca 4823655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 39336280 - 39336392
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| ||| || |||| |||| ||||||||||||| | |||||| |||||||| || ||||| |||  |  |||||||||||| |||||||||||||||    
T  39336280 acactattatccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaa-cctccaactttctatccgatgtgggacatataactc 39336378  T
Q  169 acacttgcacacaa 182  Q
    ||||||||||||||    
T  39336379 acacttgcacacaa 39336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 53118064 - 53118139
Alignment:
Q  108 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| ||||||||||| ||||| |||||||| || |||||||||||| ||||||||||||||||||| |||||||    
T  53118064 tcctctcacttataaggtgttcaa-cctttactcttttatccgatatggaacatataactcacacttgcccacaaca 53118139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 54018248 - 54018363
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| |||||||  |  |||||| |||||||||||||||||||| ||| || ||||||| || ||||||||   ||||||||||||    
T  54018248 cacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttc-aatctttactcttttatccgatgcaggacatataact 54018346  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||| ||||    
T  54018347 cacacttgcacataaca 54018363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 47964550 - 47964684
Alignment:
Q  50 cacaagagagaaagatgtcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatcc 149  Q
    |||||| |||| ||| | |||||| |||||| |||| ||||||||||  |||||| |||||||| |||||||  |  ||||| |||  || |||||||||    
T  47964550 cacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaa-cctccacatttctatcc 47964648  T
Q  150 gatatgggacatataactcacacttgcacacaacac 185  Q
    |||  |||||||| ||||||||||||||||||||||    
T  47964649 gatgcgggacatacaactcacacttgcacacaacac 47964684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 7767383 - 7767476
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    ||||| ||||| ||||||  ||||||||| |||||| || | ||| |||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  7767383 ttaagacaatgggtttatgagtcctcttagttataaagtgtccaa-cctttacttttctatccgatgtgggacatataactcagacttacacaca 7767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 12747871 - 12747917
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  12747871 acttttctatccgatgtgggacatataactcacacttgcacacaaca 12747917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 50612541 - 50612610
Alignment:
Q  107 gtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    ||||||||||||||||||| ||||| | |||||| || |||||||| ||||||||||||||||||||||||    
T  50612541 gtcctcttacttataaggtgttcaatc-tttactattttatccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 39914329 - 39914245
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| |||||||||| ||||||||| ||||| ||| |||| || |||| ||| || ||||||||||||||||||||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaa-cctctactgttttatctgatgtgagacatataactcacacttgcacacaaca 39914245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 51886645 - 51886561
Alignment:
Q  92 gcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    ||||||||||||| |||||||||||||||| | | ||||| |||||||| || ||| |||| || |||||||||||||||||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttcaa-cctttactattttattcgatgtgagacatataactcacacttgca 51886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 32462608 - 32462724
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| |||| |||||  |||||| | || ||||||||||||||| ||||| | |||||| ||  || |||| ||||||||||||||    
T  32462608 cacactcttatccaaaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataact 32462707  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  32462708 cacacttgtacacaaca 32462724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 53577472 - 53577357
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| | || ||||||||||  |||||| | ||| |||| || |||| | ||||| |||||||| || |||||||| || |||||||||||    
T  53577472 cacactcttacccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaa-cctttactgttttatccgatgtgtgacatataact 53577374  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  53577373 cacacttgcacacaaca 53577357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 180
Target Start/End: Original strand, 3384317 - 3384427
Alignment:
Q  69 acactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 168  Q
    ||||| |||||| ||||||||||||| | ||||||| ||||||||| ||||||| || ||  ||||| |||| || ||||  || |||||||||||||||    
T  3384317 acactcttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtt-taacctatactgttttatcatatgtgggacatataactc 3384415  T
Q  169 acacttgcacac 180  Q
    || |||||||||    
T  3384416 acgcttgcacac 3384427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 22304005 - 22304113
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| ||| || |||| ||||||||||| |||||| ||||| ||||||||||||        ||||||||| || |||| ||| ||||||||||||||    
T  22304005 cacactcttatccaaaaccttaaggcaatgggtttatgggtccgcttacttataag--------acctttactattttatctgatgtgggacatataact 22304096  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||| ||||||||    
T  22304097 cacacttgtacacaaca 22304113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 37726572 - 37726504
Alignment:
Q  108 tcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    |||||||||||||||||| ||||| | |||||| || |||||||| || |||||||||||||||||||||    
T  37726572 tcctcttacttataaggtattcaa-catttactattttatccgatgtgagacatataactcacacttgca 37726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 43346696 - 43346643
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||||||||||    
T  43346696 aacctttactattttatccgatgtgggacatacaactcacacttgcacacaaca 43346643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 42584903 - 42584970
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| | |||||||||||||||||| ||||| | |||||| ||||||||||| ||||||||||||||    
T  42584903 gtttatggatcctcttacttataaggtgttcaatc-tttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 3135123 - 3135224
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||| | |||| ||| |||| || |||||| ||| || ||||||||||||| ||||| | |||||| || |||||||| ||||||||||||||    
T  3135123 cacactcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaa-catttactattttatccgatgtgggacatataact 3135221  T
Q  168 cac 170  Q
    |||    
T  3135222 cac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 22304292 - 22304246
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||    
T  22304292 aacctttactattttatccgatgtgggacatataactcacacttgca 22304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 33362362 - 33362460
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatggga---catataactcacacttgcacacaac 183  Q
    |||||| |||| |||||| |||||||||||||||||||| ||| |||||||| | || ||||||| ||| ||   ||||||||||||||||  |||||||    
T  33362362 ttaaggaaatgggtttatgggtcctcttacttataaggtattc-aacctttattattttatccgacatgagatatcatataactcacacttatacacaac 33362460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 46546374 - 46546490
Alignment:
Q  67 tcacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataac 166  Q
    ||||||| |||| | |||| ||||||||||| |||||| | | |||| |||||||| || ||||| |||  || |||| |||| || | |||||||||||    
T  46546374 tcacactcttacacaaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaa-cctccacatttcaatccaatgtaggacatataac 46546472  T
Q  167 tcacacttgcacacaaca 184  Q
    |||||||| |||||||||    
T  46546473 tcacacttacacacaaca 46546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 52635048 - 52634991
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||| |||||| |||  |||||||||||||||||| |||||||||| |||||||||    
T  52635048 cacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataaggt 52634991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 11661602 - 11661531
Alignment:
Q  109 cctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    ||||||||||||||| | || || || ||||| || |||||||| |||||||||||||||||||||| |||||    
T  11661602 cctcttacttataagatgtttaa-ccgttactattttatccgatgtgggacatataactcacacttgtacaca 11661531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 33809129 - 33809173
Alignment:
Q  140 ttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||||    
T  33809129 ttttctatctgatgtgggacatataacttacacttgcacacaaca 33809173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 2300015 - 2299969
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| ||  ||||||||||||| |||||||||||||||||    
T  2300015 acttttctatctgacgtgggacatataacccacacttgcacacaaca 2299969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 22303709 - 22303759
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttactt 118  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||    
T  22303709 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 25317538 - 25317492
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||||  |||||| ||||||||||| |||||||||||||||    
T  25317538 acttttctatctaatatggaacatataactcgcacttgcacacaaca 25317492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 36986040 - 36986101
Alignment:
Q  110 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 172  Q
    |||| |||||||| ||| |||| |||| |||||||||| |||| |||||||||||||||||||    
T  36986040 ctctcacttataaagttctcaa-ccttcacttttctattcgatgtgggacatataactcacac 36986101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 37011479 - 37011540
Alignment:
Q  110 ctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacac 172  Q
    |||| |||||||| ||| |||| |||| |||||||||| |||| |||||||||||||||||||    
T  37011479 ctctcacttataaagttctcaa-ccttcacttttctattcgatgtgggacatataactcacac 37011540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 47965034 - 47965080
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||| |   |||||||||||||||||||||||||||    
T  47965034 acttttctatccgatgtaaaacatataactcacacttgcacacaaca 47965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 5446 - 5350
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  5446 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaa-cctttactgttctatccgatgtggaacatataactcacacttgcacacaaca 5350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 5090 - 4975
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| ||||  ||||||||||||||||| |||| | ||||||||||| | || ||||||||||| |||| |||||| || ||||||||| |    
T  5090 cacactcttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatatt-aaacctttactgttctctccgatgtgagacatataatt 4992  T
Q  168 cacacttgcacacaaca 184  Q
    |||||||||||||||||    
T  4991 cacacttgcacacaaca 4975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 5866 - 5770
Alignment:
Q  87 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| || ||||||||||||||||||||||||||||    
T  5866 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgcgacatataactcacacttgcacacaaca 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 5490 - 5389
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||||||||| ||||  |||||| || ||||||||||||||||| ||||| |||||||| || |||||||| | ||||||||||||||||||||||||||    
T  5490 aaactttaagacaatatgtttatgggccctcttacttataaggtgttcaa-cctttactattttatccgatgtaggacatataactcacacttgcacaca 5392  T
Q  182 aca 184  Q
    |||    
T  5391 aca 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 564 - 679
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataact 167  Q
    |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| || || ||||| ||||||||||||||    
T  564 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttc-aacctttactcttttaaccgatgtgggacatataact 662  T
Q  168 cacacttgcacacaaca 184  Q
    ||||||||  |||||||    
T  663 cacacttgtgcacaaca 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 229 - 300
Alignment:
Q  105 tggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgca 177  Q
    ||||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||||||||||    
T  229 tggtcctcttacttataaggtgttcaa-cctttactattttatccgatgtgggacatataactcacacttgca 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 17520 - 17621
Alignment:
Q  82 aaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 181  Q
    |||| ||||||| ||| |||||| |||||||||||||| ||||| ||||| |||||||| || |||| ||| || |||||||||||||||||||||||||    
T  17520 aaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaa-cctttactattttatctgatgtgtgacatataactcacacttgcacaca 17618  T
Q  182 aca 184  Q
    |||    
T  17619 aca 17621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 50; Significance: 9e-20; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 1163 - 1271
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||| ||||||||||| ||||||  ||||| || |||||||||| ||||| |||||||| || ||||| || |||||||||||||||||||||    
T  1163 ttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaa-cctttactcttttatccaatgtgggacatataactcacactt 1261  T
Q  175 gcacacaaca 184  Q
    | ||||||||    
T  1262 gtacacaaca 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 3097 - 3150
Alignment:
Q  131 aacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||||||| || |||||||| ||||||||||||||||||| |||||||||||    
T  3097 aacctttactcttttatccgatgtgggacatataactcacacctgcacacaaca 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 1741 - 1798
Alignment:
Q  68 cacactgttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggt 125  Q
    |||||| |||||  |||| ||||||||||| |||||| |||||||| |||||||||||    
T  1741 cacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttataaggt 1798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 47461 - 47356
Alignment:
Q  75 ttaccccaaactttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacactt 174  Q
    |||||| |||||||||||||||| |||||| | | |||||||||||||||| |||||| ||||||| || |||| ||| || ||||| ||| ||||||||    
T  47461 ttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaa-ctttactattttatcggatgtgagacatttaattcacactt 47363  T
Q  175 gcacaca 181  Q
    |||||||    
T  47362 gcacaca 47356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 39877 - 39831
Alignment:
Q  138 acttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  39877 acttttctatccgatgtgggacatataactcacacttgaacacaaca 39831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 10192 - 10276
Alignment:
Q  99 gtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 184  Q
    |||||| |||||||||||||||||||| ||| ||| |||||  || |||||||| || |||||||||||||||||||  |||||||    
T  10192 gtttatgggtcctcttacttataaggtgttc-aacttttaccattttatccgatgtgagacatataactcacacttgtgcacaaca 10276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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