View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5706-14 (Length: 82)
Name: Solexa-NF5706-14
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5706-14 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 75; Significance: 3e-35; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-35
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 36172099 - 36172173
Alignment:
| Q |
8 |
aaacattggccaatgtcggatgtgtcaagtgtatgacattggcatgtgtttgagtaccaaagacgtcttcactct |
82 |
Q |
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| T |
36172099 |
aaacattggccaatgtcggatgtgtcaagtgtatgacattggcatgtgtttgagtaccaaagacgtcttcactct |
36172173 |
T |
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