View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5706-15 (Length: 128)

Name: Solexa-NF5706-15
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5706-15
Solexa-NF5706-15
[»] chr7 (58 HSPs)
chr7 (7-128)||(33384527-33384648)
chr7 (9-79)||(8160411-8160481)
chr7 (13-77)||(5235985-5236049)
chr7 (11-71)||(27093415-27093475)
chr7 (11-71)||(27184826-27184886)
chr7 (7-82)||(1433447-1433522)
chr7 (20-78)||(7328686-7328744)
chr7 (7-73)||(20549784-20549850)
chr7 (7-72)||(22484018-22484083)
chr7 (7-83)||(5233622-5233698)
chr7 (7-79)||(32308113-32308185)
chr7 (12-83)||(5548674-5548745)
chr7 (12-83)||(13770689-13770760)
chr7 (9-83)||(16341491-16341565)
chr7 (25-79)||(17307904-17307958)
chr7 (7-77)||(27945034-27945104)
chr7 (14-83)||(7758322-7758391)
chr7 (7-76)||(49107814-49107882)
chr7 (21-77)||(18013070-18013126)
chr7 (7-70)||(2948676-2948739)
chr7 (12-79)||(15902820-15902887)
chr7 (7-78)||(22602705-22602776)
chr7 (22-65)||(27732247-27732290)
chr7 (7-73)||(9482927-9482993)
chr7 (7-65)||(17851424-17851482)
chr7 (7-73)||(28155563-28155629)
chr7 (20-73)||(3721099-3721152)
chr7 (7-72)||(19206043-19206108)
chr7 (7-71)||(29787373-29787435)
chr7 (12-72)||(5835245-5835305)
chr7 (9-65)||(12278830-12278886)
chr7 (15-82)||(21138987-21139051)
chr7 (7-79)||(24339635-24339707)
chr7 (14-73)||(21568622-21568681)
chr7 (14-73)||(21880152-21880211)
chr7 (7-73)||(3554506-3554572)
chr7 (7-73)||(15680802-15680868)
chr7 (7-65)||(22868035-22868093)
chr7 (7-73)||(25481895-25481961)
chr7 (22-76)||(35297669-35297723)
chr7 (22-72)||(38143231-38143281)
chr7 (7-72)||(598201-598266)
chr7 (7-76)||(6630909-6630978)
chr7 (7-72)||(11061077-11061142)
chr7 (32-73)||(18213033-18213074)
chr7 (20-84)||(5409825-5409889)
chr7 (7-79)||(9408328-9408400)
chr7 (14-74)||(19992001-19992061)
chr7 (13-77)||(21140978-21141042)
chr7 (8-72)||(24146810-24146874)
chr7 (7-79)||(26329376-26329448)
chr7 (13-73)||(26733303-26733363)
chr7 (13-73)||(32287463-32287523)
chr7 (12-72)||(37742521-37742581)
chr7 (22-65)||(8239058-8239101)
chr7 (12-63)||(23191894-23191945)
chr7 (20-67)||(30813818-30813865)
chr7 (14-65)||(42720898-42720949)
[»] chr1 (66 HSPs)
chr1 (7-86)||(34712370-34712449)
chr1 (7-78)||(5376495-5376566)
chr1 (15-77)||(6427351-6427413)
chr1 (7-73)||(13436451-13436517)
chr1 (12-73)||(39953146-39953207)
chr1 (12-73)||(41877470-41877531)
chr1 (7-79)||(17754304-17754376)
chr1 (7-83)||(20157340-20157416)
chr1 (7-79)||(38503313-38503385)
chr1 (14-84)||(1486698-1486768)
chr1 (21-71)||(12713329-12713379)
chr1 (21-71)||(12717420-12717470)
chr1 (17-79)||(21038086-21038148)
chr1 (7-72)||(27471567-27471632)
chr1 (7-72)||(36878454-36878519)
chr1 (11-80)||(44296488-44296556)
chr1 (18-79)||(44482234-44482295)
chr1 (7-79)||(40285648-40285720)
chr1 (12-79)||(25361884-25361951)
chr1 (9-76)||(34371709-34371775)
chr1 (22-73)||(39130767-39130818)
chr1 (9-71)||(1864882-1864944)
chr1 (10-72)||(2784552-2784614)
chr1 (7-77)||(9828037-9828107)
chr1 (15-73)||(14332642-14332700)
chr1 (7-80)||(19562613-19562687)
chr1 (7-77)||(36905990-36906060)
chr1 (12-65)||(25098563-25098616)
chr1 (7-60)||(34298429-34298482)
chr1 (21-77)||(7918207-7918263)
chr1 (7-71)||(13997876-13997940)
chr1 (13-61)||(34257922-34257970)
chr1 (21-73)||(35999322-35999374)
chr1 (9-73)||(40181866-40181930)
chr1 (7-78)||(113292-113363)
chr1 (7-78)||(9629895-9629966)
chr1 (7-70)||(42325553-42325616)
chr1 (7-65)||(398773-398831)
chr1 (7-73)||(7353493-7353559)
chr1 (15-73)||(9709821-9709879)
chr1 (7-65)||(10233246-10233304)
chr1 (21-71)||(12707875-12707925)
chr1 (7-65)||(17831539-17831597)
chr1 (7-73)||(19637761-19637827)
chr1 (26-76)||(25272494-25272544)
chr1 (11-65)||(26238121-26238174)
chr1 (7-73)||(29163381-29163447)
chr1 (20-58)||(37055871-37055909)
chr1 (22-72)||(41017405-41017455)
chr1 (7-73)||(52903242-52903308)
chr1 (7-72)||(2896122-2896187)
chr1 (7-64)||(12443469-12443526)
chr1 (12-77)||(12993192-12993257)
chr1 (12-65)||(23714712-23714765)
chr1 (9-73)||(29229456-29229521)
chr1 (12-65)||(32724106-32724159)
chr1 (22-79)||(47989505-47989562)
chr1 (12-72)||(5898267-5898327)
chr1 (22-78)||(6612166-6612222)
chr1 (7-71)||(21378571-21378635)
chr1 (11-71)||(23738675-23738735)
chr1 (13-64)||(19324561-19324612)
chr1 (14-73)||(22515887-22515946)
chr1 (41-84)||(35919265-35919308)
chr1 (9-83)||(42004937-42005011)
chr1 (14-76)||(48148034-48148097)
[»] chr3 (35 HSPs)
chr3 (4-78)||(11313795-11313869)
chr3 (7-79)||(16192744-16192816)
chr3 (15-79)||(8039829-8039893)
chr3 (20-86)||(25948874-25948940)
chr3 (7-76)||(11665937-11666006)
chr3 (9-73)||(7928445-7928509)
chr3 (12-65)||(32804548-32804601)
chr3 (13-73)||(40993335-40993396)
chr3 (7-79)||(9800033-9800105)
chr3 (17-65)||(49505162-49505210)
chr3 (41-76)||(15314873-15314908)
chr3 (9-59)||(3618876-3618926)
chr3 (7-73)||(8383250-8383316)
chr3 (7-73)||(8789550-8789616)
chr3 (7-76)||(4990964-4991033)
chr3 (7-79)||(4987285-4987357)
chr3 (9-73)||(7614415-7614479)
chr3 (20-76)||(28678309-28678365)
chr3 (22-77)||(16789020-16789075)
chr3 (9-79)||(1509534-1509604)
chr3 (7-76)||(25064902-25064969)
chr3 (22-79)||(2731820-2731877)
chr3 (15-72)||(4201397-4201454)
chr3 (15-76)||(10455791-10455852)
chr3 (14-59)||(27277852-27277897)
chr3 (7-60)||(32429393-32429446)
chr3 (12-81)||(49651778-49651847)
chr3 (7-63)||(1438797-1438853)
chr3 (12-72)||(8842328-8842387)
chr3 (7-63)||(12704000-12704056)
chr3 (17-73)||(21419455-21419511)
chr3 (12-84)||(27505244-27505316)
chr3 (17-73)||(38731221-38731277)
chr3 (14-61)||(10690274-10690321)
chr3 (14-65)||(34307788-34307839)
[»] chr5 (45 HSPs)
chr5 (15-76)||(36838544-36838605)
chr5 (7-78)||(15410443-15410514)
chr5 (12-79)||(18592071-18592138)
chr5 (12-74)||(11685937-11685999)
chr5 (9-79)||(32766937-32767007)
chr5 (12-77)||(3966501-3966566)
chr5 (9-82)||(6471880-6471953)
chr5 (12-73)||(16203795-16203856)
chr5 (13-84)||(38749552-38749623)
chr5 (13-84)||(39205879-39205950)
chr5 (7-65)||(27144456-27144514)
chr5 (13-84)||(43001799-43001870)
chr5 (7-61)||(12927647-12927701)
chr5 (12-58)||(27932233-27932279)
chr5 (7-73)||(28588674-28588740)
chr5 (15-73)||(30502388-30502446)
chr5 (15-73)||(30542731-30542789)
chr5 (7-77)||(35017030-35017100)
chr5 (24-81)||(14873527-14873584)
chr5 (12-77)||(19579699-19579764)
chr5 (11-63)||(2577190-2577242)
chr5 (7-79)||(6035476-6035547)
chr5 (7-76)||(16734859-16734930)
chr5 (9-77)||(41091253-41091321)
chr5 (19-77)||(2236781-2236839)
chr5 (15-65)||(12264837-12264887)
chr5 (13-71)||(23220982-23221040)
chr5 (7-73)||(33178018-33178084)
chr5 (17-70)||(17593725-17593778)
chr5 (7-60)||(22013407-22013460)
chr5 (13-74)||(28296327-28296388)
chr5 (7-84)||(31084316-31084393)
chr5 (7-83)||(2436915-2436991)
chr5 (11-79)||(7677702-7677770)
chr5 (22-66)||(19293430-19293474)
chr5 (7-79)||(21522743-21522815)
chr5 (7-79)||(21533309-21533381)
chr5 (7-79)||(21814254-21814326)
chr5 (7-71)||(23012410-23012473)
chr5 (7-58)||(14674262-14674313)
chr5 (22-73)||(17925172-17925223)
chr5 (7-73)||(19820396-19820460)
chr5 (12-79)||(21542028-21542095)
chr5 (7-78)||(26609346-26609417)
chr5 (14-65)||(32630743-32630794)
[»] chr8 (40 HSPs)
chr8 (13-78)||(14634136-14634201)
chr8 (7-64)||(39954288-39954345)
chr8 (8-63)||(4611528-4611583)
chr8 (9-76)||(11803254-11803321)
chr8 (7-73)||(4786338-4786404)
chr8 (7-73)||(13844596-13844662)
chr8 (19-85)||(34222952-34223018)
chr8 (14-71)||(12570736-12570793)
chr8 (9-65)||(14731707-14731763)
chr8 (7-79)||(24362196-24362268)
chr8 (13-65)||(34897084-34897136)
chr8 (12-71)||(7658461-7658520)
chr8 (14-77)||(25172694-25172757)
chr8 (7-73)||(22595987-22596053)
chr8 (41-79)||(29447471-29447509)
chr8 (7-76)||(15816126-15816195)
chr8 (15-72)||(33382020-33382077)
chr8 (15-71)||(7442846-7442902)
chr8 (12-76)||(11927083-11927147)
chr8 (42-78)||(12402686-12402722)
chr8 (14-65)||(12570516-12570567)
chr8 (41-84)||(16641963-16642006)
chr8 (7-70)||(31236580-31236643)
chr8 (22-73)||(33405384-33405435)
chr8 (15-65)||(20785473-20785523)
chr8 (7-65)||(27213540-27213598)
chr8 (13-74)||(7472514-7472575)
chr8 (9-74)||(8342967-8343032)
chr8 (7-76)||(11944658-11944727)
chr8 (13-74)||(36934669-36934730)
chr8 (21-77)||(2572052-2572108)
chr8 (21-61)||(13203648-13203688)
chr8 (7-58)||(8343309-8343360)
chr8 (20-83)||(12559096-12559159)
chr8 (13-72)||(12606830-12606889)
chr8 (21-72)||(14134706-14134757)
chr8 (41-76)||(16867202-16867237)
chr8 (13-72)||(20679396-20679455)
chr8 (9-76)||(25566836-25566903)
chr8 (22-65)||(31580135-31580178)
[»] scaffold0020 (2 HSPs)
scaffold0020 (7-83)||(135302-135378)
scaffold0020 (23-77)||(137789-137843)
[»] chr4 (41 HSPs)
chr4 (9-81)||(15659752-15659824)
chr4 (12-78)||(13134448-13134514)
chr4 (7-73)||(2361975-2362041)
chr4 (7-72)||(715608-715674)
chr4 (7-72)||(752934-753000)
chr4 (11-73)||(8423718-8423780)
chr4 (7-65)||(40613443-40613501)
chr4 (9-79)||(51701253-51701323)
chr4 (13-78)||(5775353-5775418)
chr4 (7-79)||(22234884-22234957)
chr4 (7-79)||(35723378-35723451)
chr4 (10-79)||(43368075-43368144)
chr4 (7-63)||(903915-903971)
chr4 (12-84)||(3947755-3947827)
chr4 (7-75)||(13783274-13783342)
chr4 (12-56)||(17446069-17446113)
chr4 (15-71)||(36635325-36635381)
chr4 (14-73)||(15029765-15029824)
chr4 (13-64)||(22440609-22440660)
chr4 (16-79)||(30982872-30982935)
chr4 (12-79)||(40742589-40742656)
chr4 (22-65)||(55941011-55941054)
chr4 (42-84)||(7970547-7970589)
chr4 (9-83)||(18513231-18513305)
chr4 (24-78)||(18576032-18576086)
chr4 (41-79)||(19500852-19500890)
chr4 (7-65)||(24343500-24343558)
chr4 (18-72)||(33950140-33950194)
chr4 (12-73)||(4672085-4672146)
chr4 (15-72)||(7214523-7214580)
chr4 (12-61)||(21539879-21539928)
chr4 (20-77)||(30838216-30838273)
chr4 (13-65)||(999356-999408)
chr4 (13-65)||(26504307-26504359)
chr4 (41-77)||(46083987-46084023)
chr4 (7-79)||(46160889-46160961)
chr4 (12-79)||(11931278-11931345)
chr4 (15-70)||(16189710-16189765)
chr4 (7-58)||(31800493-31800544)
chr4 (9-60)||(35161031-35161082)
chr4 (13-72)||(48139263-48139322)
[»] chr6 (66 HSPs)
chr6 (7-78)||(20576628-20576699)
chr6 (14-73)||(32511666-32511725)
chr6 (20-86)||(7086801-7086867)
chr6 (14-83)||(9025484-9025553)
chr6 (7-76)||(9195751-9195820)
chr6 (15-72)||(32298608-32298665)
chr6 (7-83)||(9027171-9027247)
chr6 (7-71)||(9658872-9658936)
chr6 (14-78)||(10888969-10889033)
chr6 (17-73)||(24614413-24614469)
chr6 (7-73)||(5732510-5732576)
chr6 (15-73)||(7265593-7265651)
chr6 (7-65)||(19040345-19040403)
chr6 (7-84)||(12696317-12696394)
chr6 (15-75)||(7151413-7151473)
chr6 (7-79)||(26562682-26562754)
chr6 (19-79)||(34073341-34073401)
chr6 (22-73)||(14721249-14721300)
chr6 (7-73)||(7377972-7378038)
chr6 (7-73)||(9629376-9629442)
chr6 (7-65)||(10842525-10842583)
chr6 (15-77)||(21395304-21395365)
chr6 (7-65)||(30866152-30866210)
chr6 (15-64)||(1532241-1532290)
chr6 (9-69)||(7569172-7569232)
chr6 (20-87)||(8805560-8805625)
chr6 (7-79)||(8931596-8931668)
chr6 (13-65)||(13851735-13851787)
chr6 (7-79)||(16766690-16766762)
chr6 (21-65)||(17302354-17302398)
chr6 (32-84)||(17327644-17327696)
chr6 (7-63)||(24833243-24833299)
chr6 (14-58)||(25038086-25038130)
chr6 (9-61)||(33817944-33817996)
chr6 (25-76)||(7973665-7973716)
chr6 (9-47)||(322514-322552)
chr6 (7-77)||(677830-677900)
chr6 (7-73)||(7977830-7977896)
chr6 (7-77)||(18252747-18252817)
chr6 (7-73)||(20371110-20371176)
chr6 (15-73)||(20518346-20518404)
chr6 (19-65)||(24832593-24832639)
chr6 (12-73)||(30851600-30851659)
chr6 (7-73)||(33001289-33001355)
chr6 (9-74)||(4040461-4040526)
chr6 (7-72)||(7938109-7938174)
chr6 (12-73)||(7996378-7996439)
chr6 (12-73)||(8022362-8022423)
chr6 (17-74)||(9617437-9617494)
chr6 (35-80)||(16111750-16111795)
chr6 (12-73)||(21924935-21924996)
chr6 (24-84)||(9024165-9024225)
chr6 (7-79)||(9107364-9107436)
chr6 (12-76)||(10294105-10294169)
chr6 (7-79)||(16488584-16488656)
chr6 (7-79)||(18367829-18367901)
chr6 (14-82)||(19147842-19147910)
chr6 (9-72)||(5462681-5462744)
chr6 (12-79)||(6665211-6665278)
chr6 (16-79)||(7248360-7248423)
chr6 (21-84)||(10770663-10770726)
chr6 (9-60)||(12686408-12686458)
chr6 (13-72)||(13360373-13360432)
chr6 (7-58)||(17841604-17841655)
chr6 (14-65)||(21885792-21885843)
chr6 (8-59)||(31579239-31579290)
[»] chr2 (43 HSPs)
chr2 (9-76)||(44860315-44860382)
chr2 (7-65)||(31808070-31808128)
chr2 (7-72)||(42832277-42832342)
chr2 (7-79)||(34784976-34785048)
chr2 (7-70)||(23718019-23718082)
chr2 (7-70)||(24105691-24105754)
chr2 (7-65)||(21616755-21616813)
chr2 (21-77)||(18622613-18622669)
chr2 (7-83)||(24894382-24894458)
chr2 (7-58)||(21091716-21091767)
chr2 (7-78)||(30527590-30527661)
chr2 (15-73)||(31018591-31018649)
chr2 (22-72)||(40361755-40361805)
chr2 (15-64)||(2665897-2665946)
chr2 (9-78)||(17087935-17088003)
chr2 (7-60)||(19573971-19574024)
chr2 (12-65)||(37411252-37411305)
chr2 (12-72)||(18276519-18276579)
chr2 (13-77)||(24975321-24975385)
chr2 (22-73)||(22085012-22085063)
chr2 (12-63)||(28677907-28677958)
chr2 (14-77)||(29970545-29970608)
chr2 (9-60)||(31456654-31456705)
chr2 (14-77)||(35447883-35447946)
chr2 (9-84)||(44776594-44776669)
chr2 (21-79)||(12668417-12668475)
chr2 (24-82)||(13204035-13204093)
chr2 (49-79)||(18054797-18054827)
chr2 (22-71)||(2415325-2415374)
chr2 (9-78)||(17077007-17077075)
chr2 (42-79)||(35056896-35056933)
chr2 (13-58)||(39323263-39323308)
chr2 (21-73)||(5367199-5367251)
chr2 (12-83)||(14996213-14996285)
chr2 (9-77)||(17070937-17071004)
chr2 (7-59)||(21782832-21782884)
chr2 (17-73)||(23921256-23921312)
chr2 (17-73)||(34691805-34691861)
chr2 (17-73)||(34714217-34714273)
chr2 (8-79)||(4207851-4207921)
chr2 (16-83)||(6290159-6290225)
chr2 (7-58)||(21374714-21374765)
chr2 (12-59)||(36409641-36409688)
[»] scaffold1528 (1 HSPs)
scaffold1528 (7-79)||(1028-1100)
[»] scaffold0022 (1 HSPs)
scaffold0022 (13-77)||(99892-99956)
[»] scaffold0110 (1 HSPs)
scaffold0110 (7-82)||(28843-28918)
[»] scaffold0123 (1 HSPs)
scaffold0123 (14-79)||(44519-44584)
[»] scaffold0004 (1 HSPs)
scaffold0004 (7-58)||(92800-92851)
[»] scaffold0793 (1 HSPs)
scaffold0793 (7-72)||(4884-4950)
[»] scaffold0376 (1 HSPs)
scaffold0376 (9-79)||(6307-6377)
[»] scaffold0171 (1 HSPs)
scaffold0171 (7-84)||(23413-23490)
[»] scaffold0044 (1 HSPs)
scaffold0044 (7-79)||(53173-53245)
[»] scaffold0036 (1 HSPs)
scaffold0036 (12-76)||(9744-9808)
[»] scaffold0236 (1 HSPs)
scaffold0236 (22-76)||(25765-25819)
[»] scaffold0049 (1 HSPs)
scaffold0049 (15-72)||(63774-63831)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-76)||(241587-241656)
[»] scaffold1449 (1 HSPs)
scaffold1449 (9-77)||(1262-1329)
[»] scaffold0722 (1 HSPs)
scaffold0722 (13-73)||(7032-7092)
[»] scaffold0320 (1 HSPs)
scaffold0320 (15-71)||(17038-17094)
[»] scaffold0223 (1 HSPs)
scaffold0223 (7-79)||(20165-20237)
[»] scaffold0057 (1 HSPs)
scaffold0057 (6-58)||(24017-24069)
[»] scaffold0008 (1 HSPs)
scaffold0008 (15-79)||(263366-263430)
[»] scaffold0039 (1 HSPs)
scaffold0039 (7-78)||(84968-85039)


Alignment Details
Target: chr7 (Bit Score: 86; Significance: 2e-41; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 33384648 - 33384527
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacgtggaagtgtcggtgcttcatat 106  Q
    |||||||||||||| ||||||| | ||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||     
T  33384648 acacaccgacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtgttggtgtggtgtcggacaggtggaagtgtcagtgcttcatag 33384549  T
Q  107 atcaacatacattttaataaac 128  Q
    ||||||||||||||||||||||    
T  33384548 atcaacatacattttaataaac 33384527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 8160411 - 8160481
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  8160411 acactgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtgttggtatcgtgtcgg 8160481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 5235985 - 5236049
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| | | |||||||||||    
T  5235985 cgacaccgctaataatttaagaaaattatataatttagtgtaattatatatatcggtgtcgtgtc 5236049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 27093475 - 27093415
Alignment:
Q  11 accgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||| || |||||    
T  27093475 accgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 27184826 - 27184886
Alignment:
Q  11 accgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||| || |||||    
T  27184826 accgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 1433447 - 1433522
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggaca 82  Q
    |||| ||||||||| ||||||||| |||||||  ||| |||| |||||||||||||||| ||||||||||||||||    
T  1433447 acacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcggaca 1433522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 7328744 - 7328686
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||    
T  7328744 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 20549784 - 20549850
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||||||||| |||||||  | ||||| ||||||||||||||||| |||||||    
T  20549784 acacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 22484018 - 22484083
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||| ||||||||||||||||||| |||||||| ||||||| ||| ||||||||||||| ||||||    
T  22484018 acacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtc 22484083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 5233622 - 5233698
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    ||||||||| || | ||||||||| |||||||  |||||| |||||||||||||||||||||||| ||||| |||||    
T  5233622 acacaccgatacggttaataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtccgacac 5233698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 32308113 - 32308185
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||||||||||||||| |||||||  ||||||| ||||||||| |||||||  ||||||||||||    
T  32308113 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcgg 32308185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 5548674 - 5548745
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    ||||||||||| ||||||| |||||||   |||||| |||||||||||||||||  ||||||||||||||||    
T  5548674 ccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcggacac 5548745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 13770689 - 13770760
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    ||||||| ||||||||||||| |||||| ||||||| |||||||||| | |||| | |||||||||||||||    
T  13770689 ccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacac 13770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 16341491 - 16341565
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    |||| ||||| | ||||||||| |||||||  ||||||| ||||||||||||||||  |||||||||||||||||    
T  16341491 acacggacactgataataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcggacac 16341565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 17307904 - 17307958
Alignment:
Q  25 taatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||| |||||||  ||||||| |||||||||||||||||||||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtcgg 17307958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 27945034 - 27945104
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||| |||||||| |||||||||| |||||||| ||||||| |||||||||| | |||| |||||||||||    
T  27945034 acacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 7758322 - 7758391
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    |||||| |||||||||| ||||||||  |||||| ||| ||||||| ||||| |||||||||||||||||    
T  7758322 gacaccactaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgtcggacac 7758391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 49107814 - 49107882
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||||||||||||||||||||||| ||||||   ||||||| ||||| ||||||||||| ||||||||||    
T  49107814 acacaccgacaccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcggtgtcgtgt 49107882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 18013126 - 18013070
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||  ||||||||||    
T  18013126 ctaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgtc 18013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 2948676 - 2948739
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtg 70  Q
    |||| ||||||||||| ||||||| |||||||  | ||||||||||||||||||||||| ||||    
T  2948676 acacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 15902820 - 15902887
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||  ||||||||| | |||||  ||||||||||||||||||||||||| ||||| |||||||    
T  15902820 ccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcgg 15902887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 22602776 - 22602705
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||| |||||||||  ||| |||| |||||||  ||||||| ||||||||||||||||| ||||||||||||    
T  22602776 acacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 27732290 - 27732247
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgt 27732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 9482927 - 9482993
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||||||| |||| ||||||| |||||||  || |||| ||||||||||||||||| |||||||    
T  9482927 acacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 9482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 17851424 - 17851482
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||| ||| |||||||||||||| |||||||  ||||||| |||||||||||||||||    
T  17851424 acacatcgataccgctaataattttagaaaatcacataattcagtgtaattatatgtgt 17851482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 28155563 - 28155629
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||||||||||||| |||||||| |||||||  ||||||||| | |||| |||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcg 28155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 3721099 - 3721152
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||||| |||||||    
T  3721099 gctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcg 3721152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 19206043 - 19206108
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||| ||||||||||||||||||| |||||||  ||||||| | | ||||||||||||| ||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 29787435 - 29787373
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||| ||||||||||||||||||| |||||||  ||||||| ||||||||  |||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaat--tatgtgttggtgt 29787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 5835245 - 5835305
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||| |||||| ||| |||||||  ||||||| ||||||||||||||||| ||||||    
T  5835245 ccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 12278830 - 12278886
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||| |||| | |||||||||||||||||  ||||||| |||||||||||||||||    
T  12278830 acaccaacactgataataatttaagaaaatgacataattcagtgtaattatatgtgt 12278886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 21139051 - 21138987
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggaca 82  Q
    |||||| ||||||||| |||||||  ||||||| | ||||||||||||||| ||||||||||||||||    
T  21139051 acaccgttaataatttgagaaaat--cataatt-actgtaattatatgtgtcggtgtcgtgtcggaca 21138987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 24339635 - 24339707
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| |||||||||| | |||| |||||||||||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 24339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 21568681 - 21568622
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||| |||||||||||||||||||  ||||||| |||||||| ||||| || |||||||    
T  21568681 gacacggctaataatttaagaaaatctcataattaagtgtaatcatatgagtcggtgtcg 21568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 21880152 - 21880211
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| |||||||||||| |||||||| ||||||| |||||||||| | |||| |||||||    
T  21880152 gacatcgctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 21880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 3554572 - 3554506
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||  | |||||||||||||||| ||||||||| ||||||||||  ||| |||||||    
T  3554572 acacgccgacaccaatgataatttaagaaaattacataatttaatgtaattatagatgtcggtgtcg 3554506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 15680802 - 15680868
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||  |||||||||| || |||||  |||||||||||||||||||| |||| |||||||    
T  15680802 acacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15680868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 22868035 - 22868093
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| |||||||| |||||||| | |||||||  ||||||| |||||||||||||||||    
T  22868035 acacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgt 22868093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 25481895 - 25481961
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| |||||||||| | ||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcg 25481961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 35297723 - 35297669
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||||||| |||||||  ||||||| | | ||||||||||||||||||||||||    
T  35297723 taataatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgt 35297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 38143231 - 38143281
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||| | |||||  ||||||||| ||||||||||||||||||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtc 38143281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 598201 - 598266
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||| ||||||||||||||||||||||||||  | ||||| | ||||||| || |||| ||||||    
T  598201 acacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtc 598266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 6630978 - 6630909
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| |||||||| |||||||||| ||||| |  | ||||| ||||||||||||||||| | ||||||||    
T  6630978 acacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgt 6630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 11061142 - 11061077
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||||||| ||||||||||| | |||||  ||||||||||| |||||| | |||| ||||||    
T  11061142 acacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 18213074 - 18213033
Alignment:
Q  32 agaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||  ||||||||||||||||||||||||| |||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtcg 18213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 5409889 - 5409825
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    ||||||||||| | |||||  ||||||| |||| ||||| | |||| ||||||||||||||||||    
T  5409889 gctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacg 5409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 9408400 - 9408328
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||||||   ||||||||| | |||||  |||||||||||||||||| | |||| |||||||| ||||    
T  9408400 acacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcgg 9408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 19992001 - 19992061
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgt 74  Q
    ||||| ||||||||||| |||||||  |||| || |||||||||||| |||| ||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 21141042 - 21140978
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||||| ||||||||||||||||||   |||||| ||||| |||||| |||| || ||||||||    
T  21141042 cgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgtcggagtcgtgtc 21140978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 24146810 - 24146874
Alignment:
Q  8 cacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||||  ||||||||||| |||||||  ||||||| | | ||||||||||||| ||||||    
T  24146810 cacaccgacaatgctaataattttagaaaatcacataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 26329448 - 26329376
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| |||||| || ||||||||| ||||||   || |||| ||||||||||||||||| || ||||||||||    
T  26329448 acacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcgg 26329376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 26733303 - 26733363
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||| | |||||  ||||||| ||| |||||| |||||| |||||||    
T  26733303 cgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcg 26733363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 32287523 - 32287463
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||| | |||||||  ||||||| |||| || ||||||||| |||||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcg 32287463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 37742521 - 37742581
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||| |||||||||||| |||||| ||| ||| | |||||| |||||||| ||||||    
T  37742521 ccgacaccactaataatttaacaaaatttcatgattcaatgtaataatatgtgtcggtgtc 37742581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 8239101 - 8239058
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||||   |||||| |||||||||||||||||    
T  8239101 taataatttaagaaaatcttataattcagtgtaattatatgtgt 8239058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 23191894 - 23191945
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgt 63  Q
    ||||||||||||||||||| |||||||  |||| || |||||||||| ||||    
T  23191894 ccgacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 30813818 - 30813865
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttg 67  Q
    ||||||||||| |||||||| ||||||| |||||||||| | ||||||    
T  30813818 gctaataatttgagaaaattacataattcagtgtaattacaggtgttg 30813865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 42720949 - 42720898
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||||||||||||| | |||||  ||||||| | |||||||||||||||    
T  42720949 gacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgt 42720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 3e-21; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 34712449 - 34712370
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacgtg 86  Q
    |||||||| ||| ||||||||||| |||||||  |||||||||||||||||||||||||  |||||||||||||||||||    
T  34712449 acacaccgtcactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggacacgtg 34712370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 5376566 - 5376495
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||| |||||||||||||||||||||||||||  ||||||| |||||||||| | |||| ||||||||||||    
T  5376566 acacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcg 5376495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 6427351 - 6427413
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||||||| |||||||  ||||||| | |||||||||||||||||||||||||||    
T  6427351 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 13436451 - 13436517
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||| |||||||||||||| ||||  ||||||| |||||||||||||||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcg 13436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 39953207 - 39953146
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  39953207 ccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcg 39953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 41877531 - 41877470
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| | |||| |||||||    
T  41877531 ccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcg 41877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 17754304 - 17754376
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||||||||||||||||| | |||||| ||||||| ||||||| |||||||||  |||| |||||||    
T  17754304 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 17754376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 20157416 - 20157340
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    ||||| |||||||||||||||| | |||||||  ||||||| |||||||| |||||||| ||||||||||| |||||    
T  20157416 acacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacac 20157340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 38503313 - 38503385
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||||||||||||||||| |||||||   ||| || ||||||||||||||||| |||||| ||||||    
T  38503313 acacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcgg 38503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 1486768 - 1486698
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    ||||| ||||||||||| | |||||  ||||||| |||||||||||| |||| ||||||||||||||||||    
T  1486768 gacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacg 1486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 12713379 - 12713329
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    ||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  12713379 ctaataatttaagaaaatcacataatttagtgtaattatatgtattggtgt 12713329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 12717470 - 12717420
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    ||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  12717470 ctaataatttaagaaaatcacataatttagtgtaattatatgtattggtgt 12717420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 21038086 - 21038148
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||| ||  ||||||||||||    
T  21038086 accgctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcgg 21038148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 27471632 - 27471567
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||| |||||||||||||| ||||||   ||||||| |||||||||| |||||||||||||    
T  27471632 acacaccgataccgctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtc 27471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 36878454 - 36878519
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||| ||||||||||||||||||| |||||||  ||||||| |||||||||||| |||| ||||||    
T  36878454 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 44296556 - 44296488
Alignment:
Q  11 accgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgga 80  Q
    |||||||||| ||||||||| |||||||  ||||||||||| |||| |||||||| ||||||||||||||    
T  44296556 accgacaccggtaataatttgagaaaatgacataatttagt-taatcatatgtgtcggtgtcgtgtcgga 44296488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 44482234 - 44482295
Alignment:
Q  18 ccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||| ||||||| |||||||  ||||||| ||||||||||||||||| |||||||||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcgg 44482295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 40285720 - 40285648
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||| |||||||||||||||| |||||||  ||||||| |||||| | |||||||| | |||||||||||    
T  40285720 acacaccaacaccgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgtcgg 40285648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 25361884 - 25361951
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||| || ||||||| |||||||  ||||||| |||||||||||||||||  ||||||||||||    
T  25361884 ccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcgg 25361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 34371709 - 34371775
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| |||||||||||||||| | ||||||  ||||||| ||||||||||||||||| ||||||||||    
T  34371709 acactgacaccgctaataattga-gaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 39130818 - 39130767
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||||| ||||||||  |||||||||||||||||||||||| |||||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcg 39130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 1864944 - 1864882
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||||||||| | ||||||||| |||||||  ||||||| ||||||||||||||||| |||||    
T  1864944 acaccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 2784552 - 2784614
Alignment:
Q  10 caccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||||| ||| |||||||||||||  ||||||| ||| ||||||||||||| ||||||    
T  2784552 caccgacaccgttaaaaatttaagaaaatcacataattgagtataattatatgtgtcggtgtc 2784614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 9828037 - 9828107
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||| |||||||| |||||||||| | |||||  ||||||| ||||||||| ||||||| |||||||||||    
T  9828037 acacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtc 9828107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 14332700 - 14332642
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||| |||||||||| |||||||  ||||||||||||||||||||||| | |||||||    
T  14332700 acaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcg 14332642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 19562687 - 19562613
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc-gtgtcgga 80  Q
    |||| ||||||| ||||||||||| |||||||  |||| || ||||||||||||||||| |||||| ||||||||    
T  19562687 acacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtcagtgtcgga 19562613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 36905990 - 36906060
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||||| |||||||||||||| | |||||||  ||||||| || ||||||||||||||||| || |||||    
T  36905990 acacaccaacaccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtc 36906060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 25098616 - 25098563
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||||||| ||||||| |||||||  ||||||| |||||||||||||||||    
T  25098616 ccgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 34298429 - 34298482
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattata 60  Q
    ||||||||||||| |||||||||| |||||||  ||||||| ||||||||||||    
T  34298429 acacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 7918263 - 7918207
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||| |||||||  ||||||| |||||||||||||||||  ||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 13997876 - 13997940
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||| ||||||||| |||| |||||| |||||  ||||||| ||||||||||||||||| |||||    
T  13997876 acacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 34257970 - 34257922
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatat 61  Q
    |||||||| ||||||||||| |||||  |||||||||||||||||||||    
T  34257970 cgacaccgttaataatttaataaaatcacataatttagtgtaattatat 34257922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 35999374 - 35999322
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||||||||||||||   |||||||||| ||||||||||||||| |||||    
T  35999374 ctaataatttaagaaaatcatataatttagtataattatatgtgttgatgtcg 35999322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 40181866 - 40181930
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||| ||||||||||| |||||||  ||||||| ||||||||||||||| | |||||||    
T  40181866 acacagacactgctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 113292 - 113363
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| |||||||||| | |||| ||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcg 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 9629966 - 9629895
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    ||||| |||||||||||||||||| | |||||   |||||| ||||| |||||| |||| ||||||||||||    
T  9629966 acacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcg 9629895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 42325553 - 42325616
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtg 70  Q
    ||||||| |||||| ||||||||| |||||||  ||||||| |||||||  |||||||||||||    
T  42325553 acacaccaacaccgataataatttgagaaaatgacataattcagtgtaacaatatgtgttggtg 42325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 398831 - 398773
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||||||||||||||| | |||||  ||||||| |||||||||||| ||||    
T  398831 acacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgt 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 7353559 - 7353493
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||| | |||| |||||  | |||||| ||||||||||||||||||||| ||| |||||||    
T  7353559 acacaccgacgctgctattaattcgaaaaaattacataatttagtgtaattatatatgtcggtgtcg 7353493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 9709821 - 9709879
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||| |||||||  |||||||   ||||||||||||||| |||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcg 9709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 10233246 - 10233304
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||| ||||| ||||||| || |||||||  ||||||| |||||||||||||||||    
T  10233246 acacaccaacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgt 10233304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 12707925 - 12707875
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    ||||||||||||||||||   ||||||||||| |||||||||| |||||||    
T  12707925 ctaataatttaagaaaatcatataatttagtgcaattatatgtattggtgt 12707875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 17831597 - 17831539
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||||||||||||||| |||||||  ||| ||| |||||||| ||||||||    
T  17831597 acacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgt 17831539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 19637761 - 19637827
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||| |||||||| |||||||||||||||||  ||| ||| | |||||| |||||||| |||||||    
T  19637761 acacatcgacaccgataataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcg 19637827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 25272494 - 25272544
Alignment:
Q  26 aatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||| |||||||  |||||||||||||||||||| |||| ||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 26238174 - 26238121
Alignment:
Q  11 accgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||||||| |||||||  ||||||| ||||||| |||||||||    
T  26238174 accgacaccgctaataatttgagaaaataacataattcagtgtaa-tatatgtgt 26238121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 29163447 - 29163381
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||||||| |||||| ||||||  ||||||| | | ||||||||||||| |||||||    
T  29163447 acacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcg 29163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 37055909 - 37055871
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaatta 58  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  37055909 gctaataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 41017455 - 41017405
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||| |||||||  ||||||||| ||||||||||| ||||||||||    
T  41017455 taataatttgagaaaatgacataatttaatgtaattatatatgttggtgtc 41017405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 52903242 - 52903308
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| |||| |||| ||||||||||| |||||   |||||| ||||||||||||||||| |||||||    
T  52903242 acacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcg 52903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 2896187 - 2896122
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||| ||||||||||||||||||| |||||||  ||||||| ||||||  ||||| ||| ||||||    
T  2896187 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtc 2896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 12443526 - 12443469
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtg 64  Q
    |||| ||||||| ||||||||||| |||||||  ||||||| ||||||||| ||||||    
T  12443526 acacgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 12993192 - 12993257
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||||||||||| | ||||| | ||||| | ||||||||||| ||| ||||| |||||    
T  12993192 ccgacaccgctaataatttacgtaaattacgtaattcaatgtaattatatatgtcggtgttgtgtc 12993257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 23714765 - 23714712
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||||||||| ||||  |||||||| ||||||| |||||||||||| ||||    
T  23714765 ccgacaccgctaaaaattagagaaaattacataattaagtgtaattatacgtgt 23714712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 29229456 - 29229521
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagt-gtaattatatgtgttggtgtcg 73  Q
    |||| ||||| ||||||||||| |||||||  ||| ||||||| |||||||||||||| |||||||    
T  29229456 acactgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtgtcggtgtcg 29229521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 32724159 - 32724106
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||| || ||||||||| ||||| || ||||||||| |||||||||||||||    
T  32724159 ccgacatcgttaataatttgagaaatttacataatttaatgtaattatatgtgt 32724106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 47989505 - 47989562
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||||| |||||  ||||||| |||||||||| | |||| |||||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 47989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 5898327 - 5898267
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||||||||||| | | |||||  ||||||| |||||||||||||| || ||||||    
T  5898327 ccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtc 5898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 6612222 - 6612166
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    ||||||||| | |||||| ||||||| |||||||||| | |||| ||||||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcg 6612166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 21378571 - 21378635
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||||||||||| |||||||| || | |||||| ||||||| |||||||||| | |||| |||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 23738675 - 23738735
Alignment:
Q  11 accgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||||||| ||||||||||| | |||||  ||||||| |||| ||||| ||||||||||||    
T  23738675 accgacacagctaataatttgaaaaaatcacataattcagtgcaattaaatgtgttggtgt 23738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 19324561 - 19324612
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtg 64  Q
    |||||| ||| ||||||| |||||||  ||||||| ||||||||||||||||    
T  19324561 cgacactgctgataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 22515946 - 22515887
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||| ||||||||||| | |||||  |||||||||||||||||| | |||| |||||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22515887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 35919308 - 35919265
Alignment:
Q  41 cataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    ||||||| |||||||||||| ||||  |||||||||||||||||    
T  35919308 cataattcagtgtaattataagtgtccgtgtcgtgtcggacacg 35919265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 42005011 - 42004937
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc-gtgtcggacac 83  Q
    |||| ||||| | ||||||||| |||||||  |||||||||||||||| ||| ||||| ||||| |||||||||||    
T  42005011 acacagacacggataataatttgagaaaatgacataatttagtgtaatcataggtgtt-gtgtcggtgtcggacac 42004937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 48148097 - 48148034
Alignment:
Q  14 gacaccgctaataatttaagaaaattcc-ataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||||||||||||||| | |||| ||  |||||| ||||||||||||| ||| ||||||||||    
T  48148097 gacaccgctaataattttaaaaaaatcatataattcagtgtaattatatatgtcggtgtcgtgt 48148034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 1e-20; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 11313869 - 11313795
Alignment:
Q  4 aacacacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||| |||||||||| ||||||||||| |||||||  |||||||||||||||||||||||||| |||||||||||    
T  11313869 aacagacaccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgtcg 11313795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 16192816 - 16192744
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||||| |||||||||||    
T  16192816 acacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcgg 16192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 8039893 - 8039829
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||||||||| ||||||||  |||||| ||||||||||||||||| |||||||||||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcgg 8039829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 25948940 - 25948874
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacgtg 86  Q
    ||||||||||| | |||||  ||||||| |||||||||||| |||||||||||||||||||||||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggacacgtg 25948874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 11665937 - 11666006
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||||||||| |||||||||||| | |||||  || |||||||||||||||||||||| ||||||||||    
T  11665937 acacaccgacaacgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgt 11666006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 7928445 - 7928509
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||||||| | |||||  ||||||| ||||||||||||||||| |||||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 32804601 - 32804548
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||||| ||||||||| |||||||  |||||||||||||||||||||||||    
T  32804601 ccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgt 32804548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 40993396 - 40993335
Alignment:
Q  13 cgacaccgctaataatttaagaaaattc-cataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||||| |||| || ||||||| ||||||||||||||||| |||||||    
T  40993396 cgacaccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 40993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 9800033 - 9800105
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| |||||||| |||||||||| |||||||| |||||||  |||||||| || |||| |||||||||||||    
T  9800033 acacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcgg 9800105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 49505210 - 49505162
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 49505162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 15314908 - 15314873
Alignment:
Q  41 cataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  15314908 cataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 3618876 - 3618926
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattat 59  Q
    |||| ||||||||||||||||| |||||||||||||||| || ||||||||    
T  3618876 acactgacaccgctaataatttgagaaaattccataattcagcgtaattat 3618926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 8383250 - 8383316
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||||||||||||| |||||||   |||||| |||||||||||| |||| |||||||    
T  8383250 acacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 8789616 - 8789550
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||| ||| ||||||| |||||||  |||||||  |||||||||||||||| |||||||    
T  8789616 acacaccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcg 8789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 4991033 - 4990964
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| ||||||||||||||| ||| |||||||| ||||||| |||||||||| | |||| || |||||||    
T  4991033 acactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgt 4990964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 4987357 - 4987285
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| |||||||||| | ||||||||| ||||||||    
T  4987357 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcgg 4987285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 7614479 - 7614415
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||| | |||||||||||||||||  ||||||| ||| ||||||||| ||| |||||||    
T  7614479 acaccgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcggtgtcg 7614415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 28678309 - 28678365
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||||||||||| |||||  ||||||||||| ||||| ||||||| ||||||||||    
T  28678309 gctaataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcgtgt 28678365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 16789020 - 16789075
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||||||||| |||||   |||||| |||||||||||| ||||||||||||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtc 16789075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 1509534 - 1509604
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||| ||||||||||| | |||||  |||||||||||||||||| | |||| |||||||| ||||    
T  1509534 acactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcgg 1509604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 25064902 - 25064969
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| |||||||||||||| |||| | |||||  ||||||||||||||||  ||||||||||| ||||||    
T  25064902 acacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaat--tatgtgttggtatcgtgt 25064969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 2731820 - 2731877
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||| |||||||||||  ||||||| |||||||||||||||||  |||| |||||||    
T  2731820 taatactttaagaaaatcacataattaagtgtaattatatgtgtatgtgttgtgtcgg 2731877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 4201397 - 4201454
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||| ||||||||| | |||||  ||||||| ||||||||||||| ||||||||||    
T  4201397 acaccgttaataatttgaaaaaatcacataattaagtgtaattatatatgttggtgtc 4201454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 10455791 - 10455852
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| ||||||||| | |||||||   |||| | ||||||||||||||||||||||||||||    
T  10455791 acactgctaataatatgagaaaatcatataactaagtgtaattatatgtgttggtgtcgtgt 10455852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 27277897 - 27277852
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattat 59  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||    
T  27277897 gacactgctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 32429446 - 32429393
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattata 60  Q
    |||| |||||| ||||||||||||||||||||  ||||||| |||| |||||||    
T  32429446 acactccgacaacgctaataatttaagaaaatcacataattcagtgcaattata 32429393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 49651847 - 49651778
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggac 81  Q
    ||||||| ||||||||||| | |||||  ||||||| | |||||||| | |||| |||||||||||||||    
T  49651847 ccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 1438797 - 1438853
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgt 63  Q
    ||||||||||| |||||| ||||| |||||||  ||||||| ||| |||||||||||    
T  1438797 acacaccgacatcgctaacaatttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 8842328 - 8842387
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||||||||||||||  ||||||  |||||||| |||||||||||| ||| ||||||    
T  8842328 ccgacaccgctaataatttt-gaaaatcacataatttggtgtaattatatatgtcggtgtc 8842387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 12704000 - 12704056
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgt 63  Q
    |||| |||||||| |||||||||| ||||||   ||||||| |||||||||||||||    
T  12704000 acacgccgacaccactaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 21419511 - 21419455
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| |||||||||||||||||   |||||| | ||||||||||| |||||||||||    
T  21419511 accgttaataatttaagaaaataatataattcaatgtaattatatatgttggtgtcg 21419455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 27505244 - 27505316
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    ||||||| |||||||||||   |||||  ||||||| |||||||||| | |||| ||||||||||| ||||||    
T  27505244 ccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacg 27505316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 38731221 - 38731277
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||| | |||||  ||||||| |||||| |||||||||| |||||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcg 38731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 10690321 - 10690274
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatat 61  Q
    ||||||||||||||| | |||||||  ||||||| |||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 34307839 - 34307788
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||||||||||||| |||||||  |||| || |||||||||||| ||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgt 34307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 5e-20; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 36838544 - 36838605
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 15410514 - 15410443
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||| ||||||||||||||||||||||||||||  || ||| |||||||| |||||||||||||| ||||||    
T  15410514 acacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgttgtgtcg 15410443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 18592071 - 18592138
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||||||||| |||||||||||| ||||||| | ||||||||||||||  |||||||||||||    
T  18592071 ccgacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcgg 18592138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 11685937 - 11685999
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgt 74  Q
    ||||||||||||||||||| ||||| |  ||||||||||||||||||||||||| ||||||||    
T  11685937 ccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt 11685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 32767007 - 32766937
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||||||||||||||| |||||||  || |||| | |||||||||||||||| ||||||||||||    
T  32767007 acaccgacaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcgg 32766937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 3966501 - 3966566
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||||||||||||||||| |||||||  || |||| ||||||||||||||||| |||||||||||    
T  3966501 ccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtc 3966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 6471953 - 6471880
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggaca 82  Q
    |||| ||||| ||||||||||| |||||||  ||||||| ||||||||||||||||| |||||||||| |||||    
T  6471953 acactgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgtgggaca 6471880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 16203856 - 16203795
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||| ||||||||||| |||||||  ||||||||||||||||||||||||| |||||||    
T  16203856 ccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcg 16203795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 38749623 - 38749552
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||||||| ||||||||| | |||||  ||||||| | ||||||||||||||||||||| ||||||||||||    
T  38749623 cgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcggacacg 38749552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 39205879 - 39205950
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||||| ||||||||||| |||||||   ||||||  |||||||||||||||||||||||||||| ||||||    
T  39205879 cgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtccgacacg 39205950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 27144456 - 27144514
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||||||||||||||| || ||||  |||||||||||||||||||||||||    
T  27144456 acacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgt 27144514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 43001799 - 43001870
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||||| ||||||||||| | |||||| ||||||| |||||||||| | |||||||||  ||||||||||||    
T  43001799 cgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtcggacacg 43001870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 12927647 - 12927701
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatat 61  Q
    ||||||||||| |||||||||||| |||||||   ||||||||||||||||||||    
T  12927647 acacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 27932233 - 27932279
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  27932233 ccgacaccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 28588740 - 28588674
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||| ||||||||| |||||||  ||||||| |||||||||||| |||| |||||||    
T  28588740 acacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 30502446 - 30502388
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||| |||||||  | ||||| ||||||||||||||||| |||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 30542789 - 30542731
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||| |||||||  | ||||| ||||||||||||||||| |||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 35017030 - 35017100
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||| |||| ||| |||||||||| |||||||  |||||||||||||||||||||| | | ||||||||||    
T  35017030 acacgccgaaaccactaataatttgagaaaatcacataatttagtgtaattatatgggatagtgtcgtgtc 35017100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 14873527 - 14873584
Alignment:
Q  24 ataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggac 81  Q
    ||||||| ||||||   ||||||||||||||||||||||||| |||||| ||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggac 14873584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 19579699 - 19579764
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||||| ||||||||||| |||||||  |||||||||||| ||||| | |||| |||||||||||    
T  19579699 ccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtc 19579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 2577242 - 2577190
Alignment:
Q  11 accgacaccgctaataatttaagaaaattccataatttagtgtaattatatgt 63  Q
    |||||||||| ||||||||| |||||||  |||||||||||||||| ||||||    
T  2577242 accgacaccgataataatttgagaaaatgacataatttagtgtaatcatatgt 2577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 6035476 - 6035547
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||||||||||||||| ||||| |   |||||| ||||||||||||| ||| |||||||||||||    
T  6035476 acacgccgacaccgctaataatttgagaaa-taatataattcagtgtaattatatttgtcggtgtcgtgtcgg 6035547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 16734859 - 16734930
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataattta--gtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| ||||||||| ||||||||||||||||||  |||||  |  |||||||||||||||| ||||||||||    
T  16734859 acacgccgacaccgttaataatttaagaaaattatataatcaagtgtgtaattatatgtgtcggtgtcgtgt 16734930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 41091321 - 41091253
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||| ||||| |||||| |||| |||||||  ||||||| ||||||||||||||||| | |||||||||    
T  41091321 acacggacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtc 41091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 2236839 - 2236781
Alignment:
Q  19 cgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||||||||||||  |||||||| ||||||| ||||  | |||||||||||    
T  2236839 cgctaataatttaagaaaattatataatttaatgtaattttatgcatcggtgtcgtgtc 2236781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 12264887 - 12264837
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||||||| |||| |||||||| ||| ||| |||||||||||||||||    
T  12264887 acaccgctaattatttgagaaaattacatgattcagtgtaattatatgtgt 12264837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 23220982 - 23221040
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||||||||||||||||| | |||||  ||||||||||||| || |||||||| |||||    
T  23220982 cgacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcggtgt 23221040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 33178018 - 33178084
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| |||||||  |||||||||||| |||||  |||||||||||||||||| | |||| |||||||    
T  33178018 acacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 33178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 17593778 - 17593725
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtg 70  Q
    |||||||||||||| |||||||  | ||||| ||||||||||||| ||||||||    
T  17593778 accgctaataatttgagaaaatcacgtaattcagtgtaattatatatgttggtg 17593725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 22013407 - 22013460
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattata 60  Q
    |||| ||||||| |||||||||||   |||||| ||||||||||||||||||||    
T  22013407 acacgccgacacagctaataatttggaaaaattacataatttagtgtaattata 22013460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 28296327 - 28296388
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgt 74  Q
    |||||||| ||||||||| |||||||  ||||||| | |||| | |||||||||||||||||    
T  28296327 cgacaccgataataatttgagaaaatgacataattcaatgtactcatatgtgttggtgtcgt 28296388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 31084316 - 31084393
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| | |||||||| | |||| | ||||||||||||||||    
T  31084316 acacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacg 31084393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 2436915 - 2436991
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    |||| |||||||||||||||||||   |||||  |||||||   ||| ||||||||||| ||||||||||| |||||    
T  2436915 acacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcgtgtccgacac 2436991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 7677702 - 7677770
Alignment:
Q  11 accgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||| ||||||||||| | |||||  ||||||| |||| ||||| | |||| |||||||||||||    
T  7677702 accgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcgg 7677770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 19293474 - 19293430
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgtt 66  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||    
T  19293474 taataatttaagaaaataacataattaagtgtaatcatatgtgtt 19293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 21522743 - 21522815
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| |||||||||| |  ||| |||||||||||||    
T  21522743 acacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcgg 21522815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 21533309 - 21533381
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| |||||||||| |  ||| |||||||||||||    
T  21533309 acacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcgg 21533381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 21814254 - 21814326
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||  ||| |||||||  || |||  ||||||||||||||||| |||||||||||||    
T  21814254 acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgg 21814326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 23012473 - 23012410
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||||||||||  ||||||||||| |||||||   |||||||| ||||||||||||||| |||||    
T  23012473 acacaccgacat-gctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgt 23012410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 14674262 - 14674313
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    |||| ||||||| ||||||||||| | |||||  ||||||||||||||||||    
T  14674262 acacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 17925223 - 17925172
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||  ||||||| | |||||| |||||||| |||||||    
T  17925223 taataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcg 17925172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 19820460 - 19820396
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||||||||||||| |||||||  ||||||| |||  ||||||| |||| |||||||    
T  19820460 acactccgacaccgctaataatttgagaaaat--cataattaagtacaattataagtgtcggtgtcg 19820396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 21542028 - 21542095
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||  |||||||||||| || ||  ||||||| |||||||||| | |||| |||||||||||||    
T  21542028 ccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 21542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 26609346 - 26609417
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    ||||||||||||| |||||||||| | |||||  ||| |||||||| || ||| ||||| ||| ||||||||    
T  26609346 acacaccgacaccactaataatttgataaaatcacatgatttagtgcaactatttgtgtcggtatcgtgtcg 26609417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 32630794 - 32630743
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||| ||||||||| ||||||||  |||||| | |||||||||||||||    
T  32630794 gacaccgataataatttgagaaaattatataattcaatgtaattatatgtgt 32630743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 1e-17; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 14634201 - 14634136
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||||||||||| ||||||||||||||  |||||| ||||||||||||| ||||||||||||||||    
T  14634201 cgacaccgctaacaatttaagaaaattatataattcagtgtaattatatttgttggtgtcgtgtcg 14634136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 39954345 - 39954288
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtg 64  Q
    |||| ||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  39954345 acacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 4611528 - 4611583
Alignment:
Q  8 cacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgt 63  Q
    ||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||    
T  4611528 cacaccgacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 11803254 - 11803321
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| ||||| | |||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||    
T  11803254 acactgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgt 11803321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 4786404 - 4786338
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||  |||||||||||||||||  ||||||| ||||||||||||||||| |||||||    
T  4786404 acacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 13844662 - 13844596
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||| ||||||||||| |||||||  ||||||| ||||||||||||||||| |||||||    
T  13844662 acacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 34222952 - 34223018
Alignment:
Q  19 cgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacgt 85  Q
    |||||||||||||| |||||  ||||||| ||||||||||||||||| ||| | |||||||||||||    
T  34222952 cgctaataatttaataaaatcacataattaagtgtaattatatgtgtcggtatggtgtcggacacgt 34223018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 12570793 - 12570736
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    ||||||||||||||||||||||||   ||||||| ||||||||||||| |||||||||    
T  12570793 gacaccgctaataatttaagaaaaacgcataattaagtgtaattatatatgttggtgt 12570736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 14731707 - 14731763
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||| ||||||||||| |||||||  |||||||||||||||||||||||||    
T  14731707 acacagacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 24362268 - 24362196
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||||||||||||||| ||| |||  ||||||| |||||||||||||||||   |||||||||||    
T  24362268 acacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcgg 24362196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 34897084 - 34897136
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||||| |||||||  ||||||| |||||||||||||||||    
T  34897084 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 34897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 7658461 - 7658520
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||||||| |||||||||| |||||||| ||||||| ||||||||||||| ||| |||||    
T  7658461 ccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 25172757 - 25172694
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||| ||||||||||| | |||||| |||| |||| ||||||||||||||| |||||||||||    
T  25172757 gacactgctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtc 25172694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 22595987 - 22596053
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||| ||||||||||||| |||||  ||||||| |||||||||| | ||||||||||||    
T  22595987 acacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcg 22596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 29447471 - 29447509
Alignment:
Q  41 cataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  29447471 cataattaagtgtaattatatgtgttggtgtcgtgtcgg 29447509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 15816195 - 15816126
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| |||||||  |||||||||| | |||||  |||||||||||||||||||| |||| ||||||||||    
T  15816195 acacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 15816126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 33382077 - 33382020
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||| |||||||||||||||||  ||||||| || |||||||||||||| ||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtgtc 33382020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 7442846 - 7442902
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||||||||||||||| | |||||| ||||||| |||||||||| | ||||||||||    
T  7442846 acaccgctaataatttcataaaattacataattcagtgtaattacaagtgttggtgt 7442902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 11927147 - 11927083
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||||| | ||||||||| | |||||  ||||||| ||||||||||||||||| ||||||||||    
T  11927147 ccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 12402722 - 12402686
Alignment:
Q  42 ataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||||||| ||||||||||||||||||||||||||||    
T  12402722 ataatttaatgtaattatatgtgttggtgtcgtgtcg 12402686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 12570567 - 12570516
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||| ||||||||||||||||||   ||||||| |||||||||||||||||    
T  12570567 gacactgctaataatttaagaaaaacacataattaagtgtaattatatgtgt 12570516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 16642006 - 16641963
Alignment:
Q  41 cataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||||||||||||  |||||||||| ||||||||||||||||||    
T  16642006 cataatttagtgtcgttatatgtgtcggtgtcgtgtcggacacg 16641963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 31236643 - 31236580
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtg 70  Q
    |||| ||||||| ||||||||||| |||||||  ||||||| | ||||||||||||||| ||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 33405435 - 33405384
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||||| ||||||   ||||||||||||||||||||||||| |||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcg 33405384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 20785523 - 20785473
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||| || ||||  ||||||||| |||||||||||||||    
T  20785523 acaccgctaataatttgaggaaatcacataatttaatgtaattatatgtgt 20785473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 27213540 - 27213598
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||| ||||||||||| |||||||  ||||||| | |||||||||||||||    
T  27213540 acacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgt 27213598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 7472575 - 7472514
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgt 74  Q
    ||||||| ||||||||||||  ||||  ||||| |||||||||||||||||||  |||||||    
T  7472575 cgacaccactaataatttaaagaaatcacataaattagtgtaattatatgtgtctgtgtcgt 7472514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 8342967 - 8343032
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgt 74  Q
    |||||||||  ||||||||||| | |||||  |||||||||||||||||| | |||| ||||||||    
T  8342967 acaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 11944658 - 11944727
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| ||||||| | ||||||||| | |||||  ||||| | ||||||||||||||||| ||||||||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 36934669 - 36934730
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgt 74  Q
    |||||||||||||||||  | |||||  ||||||| | |||||||||||||||||| |||||    
T  36934669 cgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgttggcgtcgt 36934730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 2572108 - 2572052
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||| | |||||  |||||||||||||||||| | |||| |||||||||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc 2572052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 13203648 - 13203688
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatat 61  Q
    |||||||||| |||||||| ||||||| |||||||||||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 8343309 - 8343360
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    |||||||||||  ||||||||||| | |||||  ||||||||||||||||||    
T  8343309 acacaccgacatagctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 12559159 - 12559096
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    ||||||||||| |||||||   |||||| |||||||| |||||| |||||||| | ||||||||    
T  12559159 gctaataatttgagaaaatgatataattcagtgtaatcatatgtattggtgtcatctcggacac 12559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 12606889 - 12606830
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||| ||||||||||| |||||||   |||||| | ||||||||||||||| ||||||    
T  12606889 cgacactgctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 14134706 - 14134757
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||||| |||||||  ||||||| ||||||||||||| ||| ||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Complemental strand, 16867237 - 16867202
Alignment:
Q  41 cataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||||||||||||||||||| |||| ||||||||||    
T  16867237 cataatttagtgtaattataagtgtcggtgtcgtgt 16867202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 20679455 - 20679396
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||| |||||||||| |||||||  |||| || |||||||||||| |||| ||||||    
T  20679455 cgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 25566836 - 25566903
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| ||||| ||||||||||| | |||||  ||||||| |||||||||| | |||| ||||||||||    
T  25566836 acactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 31580178 - 31580135
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||||  ||||||| |||||||||||| ||||    
T  31580178 taataatttaagaaaatcacataattgagtgtaattataggtgt 31580135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 5e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 135378 - 135302
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    |||||||||||| ||||||||||| |||||||  |||||||  |||||||||||||||| ||||||||||| |||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgacac 135302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 137789 - 137843
Alignment:
Q  23 aataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||||||||||||||  || |||| |||||| | ||||||||||||||||||||    
T  137789 aataatttaagaaaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtc 137843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 5e-17; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 15659824 - 15659752
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggac 81  Q
    ||||| |||| ||||||||||| |||||||  |||||||  ||||||||||||||||||||||||||||||||    
T  15659824 acaccaacactgctaataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtcggac 15659752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 13134448 - 13134514
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    ||||||| ||| |||||||||||||||  ||||||||||||||||||||||||| | ||||||||||    
T  13134448 ccgacactgcttataatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtcgtgtcg 13134514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 2362041 - 2361975
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||| ||||||||||| | |||||| |||||||||||||||||| | |||| |||||||    
T  2362041 acacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcg 2361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 715674 - 715608
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattc-cataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||||||| ||||||||||||| |||| || ||||||| |||||||||| | |||||||||||    
T  715674 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 753000 - 752934
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattc-cataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||||||| ||||||||||||| |||| || ||||||| |||||||||| | |||||||||||    
T  753000 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 752934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 8423780 - 8423718
Alignment:
Q  11 accgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||||| |||||||  ||||||| ||||||||||||  ||| |||||||    
T  8423780 accgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcg 8423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 40613443 - 40613501
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||||||||||| ||| |||||||  ||||||| |||||||||||||||||    
T  40613443 acacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgt 40613501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 51701253 - 51701323
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||| ||||||||||| | |||||| ||||||| |||||||||| | ||||| ||||||||||||    
T  51701253 acacggacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcgg 51701323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 5775418 - 5775353
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||||||  ||||||||| |||||||  ||||||| ||||||||||||||||| |||||| |||||    
T  5775418 cgacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcatgtcg 5775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 22234957 - 22234884
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattc-cataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||||||||| ||||| | |||| || ||||||| ||||||||| ||||||| |||||||||||||    
T  22234957 acacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcgg 22234884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 35723451 - 35723378
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattc-cataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||||||||||||||| ||||||| | ||||||| | |||||||||||||||  ||||||| ||||    
T  35723451 acacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgtatcgg 35723378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 43368075 - 43368144
Alignment:
Q  10 caccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||||| |||||||||||||||||  || | |||| | | || ||||||||||||||||||||||    
T  43368075 caccgacaccgataataatttaagaaaatgacacagtttaatatgatcatatgtgttggtgtcgtgtcgg 43368144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 903915 - 903971
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgt 63  Q
    |||||||| ||||| ||||||||| |||||||  ||||||| |||||||||||||||    
T  903915 acacaccggcaccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 3947827 - 3947755
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    ||||||| ||||||||||| | |||||  ||||||| |||||||||| | ||||  |||||||||||||||||    
T  3947827 ccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacg 3947755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 13783274 - 13783342
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtg 75  Q
    ||||||||||||||||||| |||| |||| ||  || |||| ||||||||||||||||  |||||||||    
T  13783274 acacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcgtg 13783342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 17446069 - 17446113
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaat 56  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||    
T  17446069 ccgacaccactaataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 36635325 - 36635381
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    ||||| |||||||||| |||||||  ||||||| |||||||||||||||||| ||||    
T  36635325 acaccactaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgt 36635381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 15029765 - 15029824
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||| ||||||||||| | || ||  ||||||| |||||||||||||||||||||||||    
T  15029765 gacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcg 15029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 22440660 - 22440609
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtg 64  Q
    |||||||| ||||||||| |||||||  ||||||| ||||||||||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 30982935 - 30982872
Alignment:
Q  16 caccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||| |||| |||||||  |||| || |||||||||||| |||| |||||||||||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 40742589 - 40742656
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||  ||||||||| |||||||   ||||| |||||||||||||||||| | |||||||||||    
T  40742589 ccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcgg 40742656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 55941054 - 55941011
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||    
T  55941054 taataatttaagaaaattacataatttagtataatcatatgtgt 55941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 7970547 - 7970589
Alignment:
Q  42 ataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||    
T  7970547 ataattcagtgtaattatatgttttggtgtcgtgtcagacacg 7970589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 18513305 - 18513231
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    |||| ||||||| ||||||||| |||||||  ||||||| | |||||| ||||||||  |||| |||||||||||    
T  18513305 acacagacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgtcggacac 18513231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 18576086 - 18576032
Alignment:
Q  24 ataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    ||||||| |||||||  |||||||  ||||||||||||||||||||||| |||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtgttggtgtcatgtcg 18576032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 19500890 - 19500852
Alignment:
Q  41 cataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  19500890 catattttagtgtaattatatgtgatggtgtcgtgtcgg 19500852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 24343500 - 24343558
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||| | ||||||||| |||||||| ||||||| |||||||||||| ||||    
T  24343500 acacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgt 24343558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 33950140 - 33950194
Alignment:
Q  18 ccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||||||| |||||||  ||||||||| |||||| |||||||| ||||||    
T  33950140 ccgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtc 33950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 4672146 - 4672085
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||| |||||||||||  ||||||| ||||||| ||||||  ||||||||| |||||||    
T  4672146 ccgacacagctaataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtcg 4672085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 7214580 - 7214523
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||| |||||||||| |||||||  ||||||||| |||||||||||| || ||||||    
T  7214580 acaccactaataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgtc 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 21539928 - 21539879
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatat 61  Q
    ||||||||  |||||||||||||||||   ||||||||||||||||||||    
T  21539928 ccgacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 30838216 - 30838273
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||||||||| | ||||||  ||||||||||||||||||| || | |||||||||||    
T  30838216 gctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtc 30838273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 999408 - 999356
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||| |||||||||||| || ||||   ||||||||||||||||||||||||    
T  999408 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 999356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 26504359 - 26504307
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||| |||||||||||||||||||   ||| || |||||||||||||||||    
T  26504359 cgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgt 26504307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 46084023 - 46083987
Alignment:
Q  41 cataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||| |||||||||||||||||| |||||||||||    
T  46084023 cataatctagtgtaattatatgtgtcggtgtcgtgtc 46083987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 46160889 - 46160961
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||| ||| ||| ||| | |||||||  ||||||| ||||| ||||||||||| |||||||||||||    
T  46160889 acacgccgacgccgttaaaaatatgagaaaataacataattcagtgttattatatgtgtcggtgtcgtgtcgg 46160961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 11931278 - 11931345
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||| ||||||| | | |||||  ||||||||||||||| ||||||||| | |||| ||||||    
T  11931278 ccgacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtgtcgatgtcatgtcgg 11931345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 16189710 - 16189765
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtg 70  Q
    |||||||||| ||||| |||||||  ||||||| ||||||||||| ||||| ||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 31800544 - 31800493
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    |||||||||||| ||||||||||| | ||||||  |||||||| ||||||||    
T  31800544 acacaccgacacagctaataattttaaaaaattaaataatttaatgtaatta 31800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 35161031 - 35161082
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattata 60  Q
    |||||||||| |||| ||||| ||||||||  ||||||| ||||||||||||    
T  35161031 acaccgacactgctactaattcaagaaaatcacataattcagtgtaattata 35161082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 48139263 - 48139322
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||| | ||||||||| ||| |||  ||||||||| ||||||||||||||||| ||||    
T  48139263 cgacactgttaataatttgagataatctcataatttaatgtaattatatgtgttgatgtc 48139322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 2e-16; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 20576699 - 20576628
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||||||||| | ||||||||||  |||||||| ||||||| |||||||||||| |||||||||||||||||    
T  20576699 acacaccgacgcggctaataattcgagaaaattgcataattcagtgtaattataagtgttggtgtcgtgtcg 20576628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 32511725 - 32511666
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||| ||||||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcg 32511666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 7086801 - 7086867
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacgtg 86  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  7086801 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtcagacacgtg 7086867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 9025553 - 9025484
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    ||||| ||||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||| |||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacac 9025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 9195820 - 9195751
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||| ||||||  |||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||    
T  9195820 acacatcgacactcctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 32298665 - 32298608
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||    
T  32298665 acaccgctaataatttaagatcatcacataatttagtgtaattatatgtgttggtgtc 32298608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 9027171 - 9027247
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    |||| ||||||||||||||||||| ||| |||  |||||||  |||||||||||||||| ||||||||||| |||||    
T  9027171 acacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgacac 9027247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 9658872 - 9658936
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||| |||||||||||||||||||||||||||  ||||||| ||||||||||||| ||| |||||    
T  9658872 acacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 10889033 - 10888969
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    ||||||||||||||||| | |||||  ||||||||||||| |||||||||||| |||||||||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgttagtgtcgtgtcg 10888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 24614413 - 24614469
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||| ||||||  |||||||||||||||| |||||||||||||||    
T  24614413 accgctaataatttaaaaaaattatataatttagtgtaattgtatgtgttggtgtcg 24614469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 5732576 - 5732510
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||| ||||||||| |||||||  |||| |||||||||||||||||||| |||||||    
T  5732576 acacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcg 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 7265651 - 7265593
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||| |||||||  ||||||| ||||||||||||||||| |||||||    
T  7265651 acaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 19040345 - 19040403
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||||||||||||||| |||||||  ||||||| |||||||||||||||||    
T  19040345 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 19040403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 12696317 - 12696394
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||| ||||||| ||||||||||| | |||||| ||||||| |||||||||| | ||||  |||||||||||||||||    
T  12696317 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacacg 12696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 7151413 - 7151473
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtg 75  Q
    ||||| |||||||||| | |||||  ||||||| |||||||||||||||||||||||||||    
T  7151413 acacctctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 26562682 - 26562754
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||| ||||| |||||||  ||||||| ||||||||||||||||| | |||||||||||    
T  26562682 acacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcgg 26562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 34073401 - 34073341
Alignment:
Q  19 cgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||||| |||||||  ||||||| |||||||||||||| || |||||||||||||    
T  34073401 cgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcgg 34073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 14721249 - 14721300
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||| ||||||| | | |||||||||||||||||||||    
T  14721249 taataatttaagaaaattacataattcactataattatatgtgttggtgtcg 14721300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 7377972 - 7378038
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||||||| ||||| |||||||  ||||||| | ||||||||||||||| |||||||    
T  7377972 acaccccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 7378038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 9629376 - 9629442
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| |||||||||| |||||||| |||||||  ||||||| | ||||||||||||||| |||||||    
T  9629376 acacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 10842525 - 10842583
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||||||||||||||| | |||||  |||||||||||||||| ||||||||    
T  10842525 acacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgt 10842583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 21395365 - 21395304
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||||||| ||||||| | ||||||||||||||||| | |||| |||||||||||    
T  21395365 acaccgctaataatttgagaaaatac-ataatttagtgtaattacaagtgtcggtgtcgtgtc 21395304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 30866210 - 30866152
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||| |||||||||||||||| |||||||  ||||||| | |||||||||||||||    
T  30866210 acacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 1532241 - 1532290
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtg 64  Q
    |||||||||||||||| | |||||| ||||||| ||||||||||||||||    
T  1532241 acaccgctaataatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 7569232 - 7569172
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggt 69  Q
    ||||| |||| | ||||||||| |||||||| ||||||| |||||||||||| ||||||||    
T  7569232 acaccaacacagataataatttgagaaaattacataattcagtgtaattataggtgttggt 7569172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 8805625 - 8805560
Alignment:
Q  20 gctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacgtgg 87  Q
    ||||||||||| |||||||  ||||||||||||||||  ||||||| ||||| ||||| |||||||||    
T  8805625 gctaataatttgagaaaatcacataatttagtgtaat--tatgtgtcggtgtagtgtcagacacgtgg 8805560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 8931668 - 8931596
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||| ||||| |||||||  ||||||| ||| ||||||||||||| | |||||||||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtcgg 8931596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 13851735 - 13851787
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||||| |||||||  | ||||| |||||||||||||||||    
T  13851735 cgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 13851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 16766690 - 16766762
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| |||||||||| | |||| |||||||||||||    
T  16766690 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 16766762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 17302354 - 17302398
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||    
T  17302354 ctaataatttaagaaaatcacataattttgtgtaattatatgtgt 17302398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 17327696 - 17327644
Alignment:
Q  32 agaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||||||  ||||||||||||||| |||||||||  |||||||||||||||||    
T  17327696 agaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacg 17327644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 24833299 - 24833243
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgt 63  Q
    |||| |||||||  ||||||| ||||||||||  |||||||||||||||||||||||    
T  24833299 acacgccgacactactaataagttaagaaaatcgcataatttagtgtaattatatgt 24833243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 25038130 - 25038086
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||    
T  25038130 gacaccgttaataatttgagaaaattacataatttagtgtaatta 25038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 33817944 - 33817996
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatat 61  Q
    |||| ||||||||||||||||  |||||||| ||||||| |||||||||||||    
T  33817944 acactgacaccgctaataattggagaaaatttcataattcagtgtaattatat 33817996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 7973665 - 7973716
Alignment:
Q  25 taatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||||||| |||||| ||||||| |||||||||||| |||| ||||||||||    
T  7973665 taatttaaaaaaattacataattaagtgtaattataagtgtcggtgtcgtgt 7973716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 322514 - 322552
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatt 47  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  322514 acaccgacaccactaataatttaagaaaattacataatt 322552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 677830 - 677900
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||| ||||||| | ||||||||| |||||||   ||||| ||||||| ||||||| ||||||||||||||    
T  677830 acacgccgacactgttaataatttgagaaaatcatataatatagtgtatttatatgcgttggtgtcgtgtc 677900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 7977896 - 7977830
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||| ||||||||||| | |||||| ||||||| |||||||||| | |||| |||||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 7977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 18252817 - 18252747
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||| |||| |||| ||||||||||| |||||  |||||||||||||||||| | |||| ||| |||||||    
T  18252817 acactccgataccgataataatttaaaaaaatgacataatttagtgtaattacaggtgtcggtatcgtgtc 18252747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 20371176 - 20371110
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||||||||||||| |||||||  ||||| | | ||| ||||||||||| |||||||    
T  20371176 acacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcg 20371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 20518346 - 20518404
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||| |||| ||||| |||||||| ||||| | ||| |||||||||||||||||||||    
T  20518346 acaccactaacaatttgagaaaattacataaatcagtataattatatgtgttggtgtcg 20518404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 24832593 - 24832639
Alignment:
Q  19 cgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||| |||||||   ||||||||||||||||||||||||    
T  24832593 cgctaataatttgagaaaatcttataatttagtgtaattatatgtgt 24832639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 30851600 - 30851659
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||| |||||||||||||||||||  || |||| | ||||||||||||||| |||||||    
T  30851600 ccgacactgctaataatttaagaaaat--cacaattcaatgtaattatatgtgtcggtgtcg 30851659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 33001355 - 33001289
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| | ||||||||||||||| |||||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 4040461 - 4040526
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgt 74  Q
    ||||||||||| ||||||||||||||||||  ||| ||| ||| ||||||||| ||| || |||||    
T  4040461 acaccgacaccactaataatttaagaaaatcgcattattcagtataattatatatgtcggcgtcgt 4040526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 7938109 - 7938174
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||| ||||||| ||||||||||| | |||||   ||||||||||||||||||| |||| ||||||    
T  7938109 acacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 7996439 - 7996378
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||| ||||||||||| |||||||   |||||| |||||||||||||| || |||||||    
T  7996439 ccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 8022362 - 8022423
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||| ||||||||||| |||||||   |||||| |||||||||||||| || |||||||    
T  8022362 ccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 9617437 - 9617494
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgt 74  Q
    |||| ||||||||| |||||||  ||||||| | ||||||||||||||| ||||||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgt 9617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 16111795 - 16111750
Alignment:
Q  35 aaattccataatttagtgtaattatatgtgttggtgtcgtgtcgga 80  Q
    ||||| |||||||||||||||||||| ||||  |||||||||||||    
T  16111795 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 16111750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 21924996 - 21924935
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    ||||||| ||||||||||| |||| ||   |||||| ||||||||||||||||| |||||||    
T  21924996 ccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcg 21924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 9024225 - 9024165
Alignment:
Q  24 ataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    ||||||| |||||||  ||||||| | |||||| ||||||||  |||||||||||||||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgtgtcggacacg 9024165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 9107436 - 9107364
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||||||| | |||||  || |||| |||||||||| | |||| |||||||||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcgg 9107364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 10294105 - 10294169
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| |||||||||||||| ||| |||  |||| || | ||||||||||||||| ||||||||||    
T  10294105 ccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgt 10294169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 16488656 - 16488584
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||  ||| |||||||  || |||  ||||||||||||||||| |||||||||||||    
T  16488656 acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgg 16488584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 18367829 - 18367901
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||  ||| |||||||  || |||  ||||||||||||||||| |||||||||||||    
T  18367829 acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgg 18367901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 19147842 - 19147910
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggaca 82  Q
    ||||||| |||||||||||||||||   |||  | || |||||||||||||| ||||||||||| ||||    
T  19147842 gacaccgttaataatttaagaaaatcatatagatcagagtaattatatgtgtcggtgtcgtgtccgaca 19147910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 5462681 - 5462744
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||| ||||||| ||||||||| |||||||  ||||||| | ||||||||||| ||||| ||||    
T  5462681 acactgacaccgttaataatttgagaaaatcacataattcattgtaattatatatgttgatgtc 5462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 6665211 - 6665278
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| |||||||||||||| || ||||  ||||||| || |||||||| ||||| ||| |||||||||    
T  6665211 ccgaaaccgctaataatttgagtaaatcacataattcagagtaattatttgtgtcggtatcgtgtcgg 6665278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 7248360 - 7248423
Alignment:
Q  16 caccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| |||||||| | || ||||  ||||||| || ||||||||||||||||| ||||||||||    
T  7248360 caccactaataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcgg 7248423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 10770726 - 10770663
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||||||||| | |||||  ||||||| |||||||||| | |||| ||||||||||| ||||||    
T  10770726 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacacg 10770663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 12686458 - 12686408
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattata 60  Q
    |||||||||| |||||||||||||||||||  ||| ||| ||||||||||||    
T  12686458 acaccgacactgctaataatttaagaaaatcacat-attcagtgtaattata 12686408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 13360432 - 13360373
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||| ||| |||||| |||||||  ||||||| ||||||||||||||| | ||||||    
T  13360432 cgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcggtgtc 13360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 17841655 - 17841604
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    |||| ||||||| ||||||||||| | |||||  ||||||||||||||||||    
T  17841655 acacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 21885792 - 21885843
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||| ||||||||||| |||||  ||||||||| | |||||||||||||    
T  21885792 gacaccgataataatttaaaaaaataacataatttaatctaattatatgtgt 21885843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 31579290 - 31579239
Alignment:
Q  8 cacaccgacaccgctaataatttaagaaaattccataatttagtgtaattat 59  Q
    |||||| |||||| ||||||||| |||||||  ||||||| |||||||||||    
T  31579290 cacaccaacaccgttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 2e-16; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 44860315 - 44860382
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| ||||||||||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||    
T  44860315 acactgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 31808070 - 31808128
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||||||||||||||||||||||||| |||||  ||||||| |||||||||||||||||    
T  31808070 acacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgt 31808128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 42832342 - 42832277
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||||||||||||||||||| |||||||| |||| || |||||||||||| |||| ||||||    
T  42832342 acacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 34785048 - 34784976
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||||||  |||||  ||| |||||||  ||||||||||||||||||||||||| |||||||||||||    
T  34785048 acacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcgg 34784976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 23718019 - 23718082
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtg 70  Q
    |||||||||||||||||||||||| ||||| |  ||||||| ||||||||||||||||| ||||    
T  23718019 acacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 24105691 - 24105754
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtg 70  Q
    |||||||||||||||||||||||| ||||| |  ||||||| ||||||||||||||||| ||||    
T  24105691 acacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 21616755 - 21616813
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    |||| ||||||||||||||||||| |||||||  ||||||| |||||||||||||||||    
T  21616755 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 18622613 - 18622669
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||| |||||  ||||||| |||||||||||| ||||||||||||||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 24894382 - 24894458
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    |||| ||||||| ||||||||||||| |||||  ||||||| |||| ||||| | |||||||| |||||||||||||    
T  24894382 acacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgtgtcggacac 24894458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 21091716 - 21091767
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    ||||||||||||||||||||||||||||||||  |||| || ||||||||||    
T  21091716 acacaccgacaccgctaataatttaagaaaataacatacttcagtgtaatta 21091767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 30527661 - 30527590
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    ||||||| |||| | ||||||||| |||||||   |||||||||||||||||||||||| ||| ||||||||    
T  30527661 acacacccacactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggtatcgtgtcg 30527590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 31018591 - 31018649
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||| |||||||  ||| |||||||||||||||| |||| |||||||    
T  31018591 acaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcg 31018649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 40361805 - 40361755
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||| | |||||| ||||||||||||||||||||| ||||||||||    
T  40361805 taataatttgaaaaaattacataatttagtgtaattatatctgttggtgtc 40361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 2665946 - 2665897
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtg 64  Q
    ||||| |||||||||| |||||||  ||||||||||||||||||||||||    
T  2665946 acaccactaataattttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 17088003 - 17087935
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||||||||||| ||||||||||| ||||||  ||||||   ||||||||||| ||||||||||||||||    
T  17088003 acaccgacaccgttaataatttaa-aaaattatataattcgatgtaattatatatgttggtgtcgtgtcg 17087935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 19573971 - 19574024
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattata 60  Q
    |||| ||||||||| |||||||||||||||||  ||||||| ||||||||||||    
T  19573971 acacgccgacaccgataataatttaagaaaataacataattcagtgtaattata 19574024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 37411305 - 37411252
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgt 65  Q
    ||||||||||||||||||| |||||||  ||||||| ||||| |||||||||||    
T  37411305 ccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgt 37411252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 18276519 - 18276579
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    ||||||||||||||||||| |||||||  | ||||| ||||||||||| ||||| ||||||    
T  18276519 ccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtc 18276579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 24975385 - 24975321
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||||||||| |||||||   |||||| ||||||| |||||| || |||||||||||    
T  24975385 cgacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtc 24975321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 22085012 - 22085063
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||||||  |||||||||||||||| || ||||| |||||||    
T  22085012 taataatttaagaaaatgacataatttagtgtaatcatttgtgtcggtgtcg 22085063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 28677907 - 28677958
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgt 63  Q
    ||||||||||||||||||| | |||||  ||||||| |||||||||||||||    
T  28677907 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 29970608 - 29970545
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    ||||||||||||||||| |||||||  |||| || |||||||| |||||||| | |||||||||    
T  29970608 gacaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtcgtgtc 29970545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 31456705 - 31456654
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattata 60  Q
    |||| ||||||||||||||||||||||||||   ||||| ||||||||||||    
T  31456705 acactgacaccgctaataatttaagaaaattatgtaattcagtgtaattata 31456654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 35447946 - 35447883
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||| ||||||||||| ||||||||| ||||||| ||| ||| |||| ||||| ||||||||||    
T  35447946 gacatcgctaataattaaagaaaattacataattcagtataactataagtgtttgtgtcgtgtc 35447883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 44776594 - 44776669
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||| |||||||  ||||||||| ||||||  ||||| | |||||||| |||| ||| ||||||||||||||||||    
T  44776594 acacggacaccgacaataatttatgaaaatgacataactcagtgtaatcatatatgtcggtgtcgtgtcggacacg 44776669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 12668475 - 12668417
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||| | |||||  ||||||| |||||||||||| |||| |||||||||||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcgg 12668417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 13204035 - 13204093
Alignment:
Q  24 ataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggaca 82  Q
    ||||||| |||||||| ||||||||| | ||| |||||||||  |||||||||||||||    
T  13204035 ataatttgagaaaattacataatttaatataactatatgtgtcagtgtcgtgtcggaca 13204093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 79
Target Start/End: Complemental strand, 18054827 - 18054797
Alignment:
Q  49 agtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||||||||||||||||||||||||    
T  18054827 agtgtaattatatgtgttggtgtcgtgtcgg 18054797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 2415325 - 2415374
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    ||||||||| ||||||||  |||||| ||||||| |||||||||||||||    
T  2415325 taataatttgagaaaattatataattaagtgtaactatatgtgttggtgt 2415374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 17077075 - 17077007
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||||||||||| ||||||||||| ||||||  ||||||   | ||||||||| ||||||||||||||||    
T  17077075 acaccgacaccgttaataatttaa-aaaattatataattcgatataattatatatgttggtgtcgtgtcg 17077007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 35056896 - 35056933
Alignment:
Q  42 ataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcgg 35056933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 39323263 - 39323308
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    |||||||||||||||||| | |||||| ||||||| ||||||||||    
T  39323263 cgacaccgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 5367199 - 5367251
Alignment:
Q  21 ctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||| || ||||  ||||||| ||||||||||||||||| |||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 14996285 - 14996213
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattcc-ataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    ||||||| ||||||||||| | |||| ||  ||||||||||||||||| | |||| |||||| ||||||||||    
T  14996285 ccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtcttgtcggacac 14996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 17071004 - 17070937
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||| ||||||||||| ||||||  ||||||   ||||||||||| | |||||||||||||    
T  17071004 acaccgacaccgttaataatttaa-aaaattatataattcgatgtaattatatatattggtgtcgtgtc 17070937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 21782884 - 21782832
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattat 59  Q
    |||| ||||||| ||||||||||| |||||||  ||||||| |||||||||||    
T  21782884 acacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 23921256 - 23921312
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||| ||||||||| |||||||| ||||||| ||||||||||||  | |||||||||    
T  23921256 accgttaataatttgagaaaattacataattcagtgtaattataaatattggtgtcg 23921312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 34691861 - 34691805
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||| | |||||   |||||| ||||||||||||||||| |||||||    
T  34691861 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 34714273 - 34714217
Alignment:
Q  17 accgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||||||||||| | |||||   |||||| ||||||||||||||||| |||||||    
T  34714273 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 4207851 - 4207921
Alignment:
Q  8 cacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||| |||||| |||||||||| | ||||   ||||||||||||||||||||| ||| ||| |||||||||    
T  4207851 cacactgacaccactaataatttgaaaaaagcgcataatttagtgtaattatat-tgtcggtatcgtgtcgg 4207921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 6290159 - 6290225
Alignment:
Q  16 caccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacac 83  Q
    ||||||||||||||||| ||||||  ||| |||||| ||||||||||| |   |||||||||||||||    
T  6290159 caccgctaataatttaaaaaaattatatattttagtataattatatgt-tcaatgtcgtgtcggacac 6290225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 21374765 - 21374714
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    |||| ||||||| ||||||||||| | |||||| ||||||| ||||||||||    
T  21374765 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 21374714  T

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Target: chr2; HSP #43
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 36409688 - 36409641
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattat 59  Q
    ||||||||||| ||||||| | |||||  |||||||||||||||||||    
T  36409688 ccgacaccgctgataatttgaaaaaatcacataatttagtgtaattat 36409641  T

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Target: scaffold1528 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 1028 - 1100
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||||||||||||||||||||||| | |||||| ||||||| ||||||| |||||||||  |||| |||||||    
T  1028 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 1100  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 99892 - 99956
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||| ||||||||| |||||||  ||||||| | |||||||||||||||||||||||||||    
T  99892 cgacaccgataataattttagaaaataacataattcaatgtaattatatgtgttggtgtcgtgtc 99956  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 28843 - 28918
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggaca 82  Q
    |||| ||||||||| |||||||||||||||||  ||||||| | ||||||||||||||| ||||| ||||| ||||    
T  28843 acacgccgacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtcagaca 28918  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 44584 - 44519
Alignment:
Q  14 gacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    ||||||||||| ||||| |||||||  ||||||| ||||||||||||||||| ||| |||||||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcgg 44519  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 92800 - 92851
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    |||| ||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  92800 acacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 4950 - 4884
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattc-cataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||||||| ||||||||||||| |||| || ||||||| |||||||||| | |||||||||||    
T  4950 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 4884  T

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Target: scaffold0376 (Bit Score: 35; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 6307 - 6377
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||| ||||||||||| | |||||| ||||||| | ||||||||||||||| |||||||| ||||    
T  6307 acacggacactgctaataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtcgtatcgg 6377  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 23413 - 23490
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcggacacg 84  Q
    |||| ||||||| | |||||| | || |||||  ||||||| |||||||||||| |||| ||||||||||||||||||    
T  23413 acacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacg 23490  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 53173 - 53245
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| |||| ||||| |||||||| |||||||  ||||||| |||||||||||| |||| |||| ||||||||    
T  53173 acacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcgg 53245  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 9808 - 9744
Alignment:
Q  12 ccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||| || |||||||||| |||||||  | ||||| ||||||||||||||||| ||||||||||    
T  9808 ccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgt 9744  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 25819 - 25765
Alignment:
Q  22 taataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    ||||||||  |||||||  |||||||||||||||||||| |||| ||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 63774 - 63831
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtc 72  Q
    |||||||||||||||| |||||||| ||||||| |||| ||||| | |||| ||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 241587 - 241656
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgt 76  Q
    |||| ||||||| |||||||||||   |||||  |||||||||||||||||||  |||| ||||||||||    
T  241587 acacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgt 241656  T

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Target: scaffold1449 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 1329 - 1262
Alignment:
Q  9 acaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtc 77  Q
    |||||||||||| ||||||||||| ||||||  ||||||   ||||||||||| | |||||||||||||    
T  1329 acaccgacaccgttaataatttaa-aaaattatataattcgatgtaattatatattttggtgtcgtgtc 1262  T

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Target: scaffold0722 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 7092 - 7032
Alignment:
Q  13 cgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcg 73  Q
    |||||| ||||||||||| | |||||| ||||||||||| |||||| | |||| |||||||    
T  7092 cgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcg 7032  T

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Target: scaffold0320 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 17094 - 17038
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgt 71  Q
    |||||| ||||||||| |||||||  ||||| | | |||||||||||||||||||||    
T  17094 acaccgttaataatttgagaaaatggcataaatcaatgtaattatatgtgttggtgt 17038  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 20165 - 20237
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||| ||||||||||| | |||||  ||||||| |||||||||| | ||||  ||||||||||||    
T  20165 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 20237  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 24017 - 24069
Alignment:
Q  6 cacacaccgacaccgctaataatttaagaaaattccataatttagtgtaatta 58  Q
    ||||||||||||| |||||||||||   |||||  ||||||||||||||||||    
T  24017 cacacaccgacacagctaataattttcaaaaatctcataatttagtgtaatta 24069  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 263430 - 263366
Alignment:
Q  15 acaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcgg 79  Q
    |||| ||||||||||| ||||||   ||||||| |||||||||||| ||||  ||||||||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcgg 263366  T

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Target: scaffold0039 (Bit Score: 28; Significance: 0.0000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 85039 - 84968
Alignment:
Q  7 acacaccgacaccgctaataatttaagaaaattccataatttagtgtaattatatgtgttggtgtcgtgtcg 78  Q
    |||| |||||||| ||| ||||||||||||||   ||||||  |||||||||||| ||| |||||| |||||    
T  85039 acacgccgacaccactactaatttaagaaaatcatataattatgtgtaattatatatgtcggtgtcatgtcg 84968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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