View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5706-32 (Length: 141)

Name: Solexa-NF5706-32
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5706-32
Solexa-NF5706-32
[»] chr4 (58 HSPs)
chr4 (1-129)||(18774318-18774446)
chr4 (1-129)||(16819014-16819142)
chr4 (1-129)||(19244267-19244394)
chr4 (1-106)||(18006694-18006798)
chr4 (1-126)||(49001636-49001745)
chr4 (7-106)||(33378720-33378819)
chr4 (1-129)||(23509624-23509737)
chr4 (1-126)||(55651817-55651926)
chr4 (24-106)||(36209790-36209873)
chr4 (1-91)||(17993486-17993576)
chr4 (78-126)||(39525861-39525909)
chr4 (82-129)||(8996984-8997031)
chr4 (1-58)||(11515597-11515654)
chr4 (1-58)||(11519629-11519686)
chr4 (1-93)||(14778116-14778208)
chr4 (1-58)||(31266454-31266511)
chr4 (1-58)||(39525800-39525857)
chr4 (78-126)||(11515545-11515593)
chr4 (78-126)||(11519577-11519625)
chr4 (78-126)||(11536356-11536404)
chr4 (1-55)||(11536411-11536465)
chr4 (18-59)||(4987834-4987875)
chr4 (9-58)||(5873931-5873980)
chr4 (1-58)||(8996918-8996975)
chr4 (9-58)||(10696170-10696219)
chr4 (9-58)||(10909939-10909988)
chr4 (9-58)||(24713986-24714035)
chr4 (9-58)||(47151742-47151791)
chr4 (18-58)||(3391005-3391045)
chr4 (78-125)||(5873882-5873927)
chr4 (78-126)||(10301045-10301093)
chr4 (18-58)||(15207071-15207111)
chr4 (78-125)||(15207115-15207160)
chr4 (18-58)||(17198096-17198136)
chr4 (18-58)||(19581803-19581843)
chr4 (78-126)||(31266515-31266563)
chr4 (78-125)||(47151797-47151842)
chr4 (78-109)||(16305616-16305647)
chr4 (79-125)||(19581754-19581798)
chr4 (79-125)||(25657632-25657676)
chr4 (79-125)||(40454068-40454112)
chr4 (79-125)||(40470324-40470368)
chr4 (79-125)||(8182594-8182639)
chr4 (79-109)||(14835806-14835836)
chr4 (79-125)||(18077624-18077669)
chr4 (79-109)||(24713951-24713981)
chr4 (77-106)||(3499442-3499471)
chr4 (1-54)||(10301101-10301154)
chr4 (79-108)||(25009290-25009319)
chr4 (18-58)||(14835761-14835801)
chr4 (77-125)||(15474944-15474992)
chr4 (18-58)||(16305651-16305691)
chr4 (18-58)||(16317876-16317916)
chr4 (78-125)||(17198140-17198185)
chr4 (18-54)||(25009328-25009364)
chr4 (27-98)||(13575892-13575962)
chr4 (27-58)||(22675298-22675329)
chr4 (27-98)||(29121667-29121738)
[»] scaffold0752 (1 HSPs)
scaffold0752 (4-128)||(2290-2414)
[»] chr5 (65 HSPs)
chr5 (1-129)||(36096847-36096975)
chr5 (1-129)||(36095390-36095518)
chr5 (7-129)||(20167828-20167949)
chr5 (1-106)||(40228957-40229062)
chr5 (1-127)||(13523480-13523590)
chr5 (1-127)||(13534207-13534317)
chr5 (1-127)||(35542864-35542974)
chr5 (1-98)||(20214850-20214947)
chr5 (27-125)||(23478642-23478740)
chr5 (24-107)||(1915697-1915781)
chr5 (7-106)||(40032509-40032608)
chr5 (1-106)||(13405384-13405489)
chr5 (1-58)||(32754397-32754454)
chr5 (76-126)||(20416732-20416782)
chr5 (1-58)||(21414648-21414705)
chr5 (78-126)||(105949-105997)
chr5 (78-126)||(21414596-21414644)
chr5 (1-55)||(20416673-20416727)
chr5 (1-58)||(105888-105945)
chr5 (76-129)||(32754342-32754395)
chr5 (78-126)||(20624580-20624627)
chr5 (27-98)||(33933598-33933669)
chr5 (9-58)||(37406418-37406467)
chr5 (18-58)||(17447145-17447185)
chr5 (18-58)||(17457761-17457801)
chr5 (18-58)||(19463743-19463783)
chr5 (18-58)||(19477773-19477813)
chr5 (77-125)||(21660491-21660539)
chr5 (18-58)||(24926572-24926612)
chr5 (18-58)||(24983870-24983910)
chr5 (18-58)||(34062408-34062448)
chr5 (79-126)||(42394831-42394876)
chr5 (79-125)||(1109528-1109572)
chr5 (30-97)||(4887303-4887370)
chr5 (27-106)||(11207724-11207803)
chr5 (27-98)||(11994210-11994281)
chr5 (79-125)||(17447096-17447140)
chr5 (79-125)||(17457712-17457756)
chr5 (79-125)||(21703495-21703539)
chr5 (79-125)||(21706359-21706403)
chr5 (5-55)||(20624523-20624573)
chr5 (79-125)||(20797528-20797573)
chr5 (79-109)||(23392532-23392562)
chr5 (79-109)||(23406279-23406309)
chr5 (79-109)||(31448369-31448399)
chr5 (79-109)||(34051792-34051822)
chr5 (79-109)||(34062453-34062483)
chr5 (79-108)||(21517560-21517589)
chr5 (79-108)||(21519893-21519922)
chr5 (18-55)||(21703547-21703584)
chr5 (80-125)||(24983820-24983864)
chr5 (80-125)||(36084295-36084339)
chr5 (80-125)||(43622253-43622297)
chr5 (18-58)||(20551603-20551643)
chr5 (80-108)||(20551649-20551677)
chr5 (18-58)||(20562111-20562151)
chr5 (18-54)||(21517515-21517551)
chr5 (18-58)||(23392487-23392527)
chr5 (18-58)||(23406234-23406274)
chr5 (18-58)||(34051747-34051787)
chr5 (18-58)||(36084249-36084289)
chr5 (18-58)||(43622303-43622343)
chr5 (79-125)||(1122286-1122330)
chr5 (79-125)||(8521675-8521719)
chr5 (79-125)||(37406472-37406516)
[»] chr1 (57 HSPs)
chr1 (1-129)||(45070317-45070444)
chr1 (1-129)||(28474500-28474626)
chr1 (1-106)||(26547929-26548034)
chr1 (1-127)||(46180573-46180683)
chr1 (1-106)||(22019638-22019743)
chr1 (1-98)||(22655789-22655886)
chr1 (1-106)||(22643199-22643304)
chr1 (1-129)||(20799355-20799468)
chr1 (1-60)||(14387803-14387862)
chr1 (24-106)||(23065236-23065319)
chr1 (24-106)||(28380296-28380379)
chr1 (1-129)||(23927318-23927431)
chr1 (1-126)||(22609671-22609779)
chr1 (1-60)||(18310649-18310708)
chr1 (78-129)||(20883620-20883671)
chr1 (1-55)||(20883558-20883612)
chr1 (5-58)||(20866991-20867044)
chr1 (1-91)||(52350393-52350483)
chr1 (76-126)||(675865-675915)
chr1 (24-93)||(19038307-19038377)
chr1 (1-58)||(675917-675974)
chr1 (26-90)||(19170054-19170119)
chr1 (78-126)||(11194806-11194854)
chr1 (78-126)||(18310710-18310758)
chr1 (27-98)||(25448243-25448314)
chr1 (75-125)||(17371332-17371382)
chr1 (77-126)||(18381675-18381722)
chr1 (75-125)||(21544289-21544339)
chr1 (9-58)||(9050173-9050222)
chr1 (9-58)||(21165289-21165338)
chr1 (78-125)||(9050226-9050271)
chr1 (78-126)||(12947137-12947185)
chr1 (78-126)||(14387864-14387912)
chr1 (78-125)||(21165240-21165285)
chr1 (18-58)||(24252972-24253012)
chr1 (18-58)||(39193805-39193845)
chr1 (18-58)||(39587424-39587464)
chr1 (18-58)||(47195733-47195773)
chr1 (79-125)||(147971-148015)
chr1 (79-125)||(154046-154090)
chr1 (27-98)||(2327118-2327189)
chr1 (79-125)||(5974170-5974214)
chr1 (79-125)||(39587375-39587419)
chr1 (79-125)||(47195684-47195728)
chr1 (8-58)||(11194752-11194802)
chr1 (9-58)||(17957706-17957755)
chr1 (21-58)||(20441031-20441068)
chr1 (79-108)||(24252938-24252967)
chr1 (80-125)||(26577024-26577068)
chr1 (77-106)||(37642533-37642562)
chr1 (80-125)||(39193851-39193895)
chr1 (24-90)||(44201299-44201363)
chr1 (79-126)||(4250339-4250384)
chr1 (51-106)||(5929990-5930046)
chr1 (18-58)||(18381631-18381671)
chr1 (27-106)||(2267347-2267425)
chr1 (79-125)||(17957657-17957701)
[»] scaffold0090 (2 HSPs)
scaffold0090 (21-126)||(1085-1190)
scaffold0090 (21-126)||(5465-5570)
[»] chr6 (90 HSPs)
chr6 (1-129)||(19289026-19289155)
chr6 (18-129)||(17047966-17048078)
chr6 (24-106)||(21128522-21128605)
chr6 (1-127)||(11235938-11236048)
chr6 (1-126)||(9933333-9933443)
chr6 (27-125)||(17608098-17608196)
chr6 (1-127)||(18499044-18499154)
chr6 (1-60)||(11206436-11206495)
chr6 (24-106)||(11525382-11525465)
chr6 (1-58)||(17741347-17741404)
chr6 (76-129)||(18555692-18555745)
chr6 (1-119)||(31931871-31931973)
chr6 (77-129)||(12952836-12952888)
chr6 (24-93)||(7585918-7585988)
chr6 (71-129)||(30401315-30401372)
chr6 (73-129)||(11206383-11206439)
chr6 (78-126)||(18825944-18825992)
chr6 (78-126)||(29765976-29766024)
chr6 (1-58)||(12952775-12952833)
chr6 (1-58)||(18555747-18555804)
chr6 (1-58)||(18825883-18825940)
chr6 (1-54)||(25722601-25722654)
chr6 (1-54)||(25735201-25735254)
chr6 (1-58)||(29766028-29766085)
chr6 (78-126)||(22309233-22309281)
chr6 (78-126)||(25519130-25519178)
chr6 (27-98)||(16264945-16265015)
chr6 (8-58)||(5845576-5845626)
chr6 (1-43)||(18834296-18834338)
chr6 (75-125)||(20635999-20636049)
chr6 (9-58)||(10547424-10547473)
chr6 (9-58)||(13928646-13928695)
chr6 (78-126)||(17741408-17741457)
chr6 (1-54)||(22309290-22309343)
chr6 (1-58)||(25519182-25519239)
chr6 (76-109)||(25675621-25675654)
chr6 (1-42)||(25675673-25675714)
chr6 (76-109)||(25679697-25679730)
chr6 (1-42)||(25679749-25679790)
chr6 (76-109)||(25686438-25686471)
chr6 (76-109)||(25735261-25735294)
chr6 (78-126)||(25800760-25800806)
chr6 (78-126)||(17043048-17043096)
chr6 (78-110)||(17745439-17745471)
chr6 (18-58)||(18925424-18925464)
chr6 (77-125)||(22387078-22387126)
chr6 (78-126)||(27166150-27166198)
chr6 (1-53)||(30401261-30401313)
chr6 (79-125)||(5845527-5845571)
chr6 (79-125)||(16123250-16123294)
chr6 (79-125)||(17577504-17577548)
chr6 (79-125)||(18925469-18925513)
chr6 (79-109)||(8654120-8654150)
chr6 (79-125)||(10402825-10402870)
chr6 (79-109)||(10547478-10547508)
chr6 (79-125)||(12828120-12828165)
chr6 (79-109)||(13913472-13913502)
chr6 (79-125)||(25788128-25788173)
chr6 (79-109)||(25986539-25986569)
chr6 (79-125)||(32761639-32761684)
chr6 (79-108)||(9366-9395)
chr6 (78-107)||(4293186-4293215)
chr6 (21-58)||(8654155-8654192)
chr6 (79-108)||(12382367-12382396)
chr6 (9-58)||(16122898-16122947)
chr6 (78-126)||(16122951-16122997)
chr6 (9-58)||(16123196-16123245)
chr6 (9-54)||(17745386-17745431)
chr6 (80-125)||(20029629-20029673)
chr6 (80-125)||(20062380-20062424)
chr6 (76-109)||(25722661-25722694)
chr6 (1-58)||(27166089-27166146)
chr6 (80-125)||(30119972-30120016)
chr6 (78-126)||(31572838-31572884)
chr6 (18-58)||(7375437-7375477)
chr6 (80-108)||(7375483-7375511)
chr6 (18-54)||(11146911-11146947)
chr6 (18-58)||(12382401-12382441)
chr6 (18-58)||(12828170-12828210)
chr6 (79-126)||(13928596-13928641)
chr6 (78-126)||(17064637-17064685)
chr6 (26-58)||(18378592-18378624)
chr6 (18-58)||(25788178-25788218)
chr6 (18-54)||(25800815-25800851)
chr6 (18-58)||(30119926-30119966)
chr6 (27-98)||(15954987-15955058)
chr6 (7-58)||(17043100-17043151)
chr6 (27-98)||(17381730-17381801)
chr6 (19-58)||(20062335-20062374)
chr6 (27-58)||(21235436-21235467)
[»] chr2 (49 HSPs)
chr2 (21-126)||(19297314-19297419)
chr2 (21-126)||(19312675-19312780)
chr2 (1-106)||(20646233-20646337)
chr2 (1-129)||(22755745-22755872)
chr2 (1-129)||(17968860-17968972)
chr2 (1-106)||(24814270-24814374)
chr2 (27-106)||(1084347-1084426)
chr2 (1-129)||(24275488-24275600)
chr2 (24-106)||(24793718-24793799)
chr2 (1-126)||(19497660-19497769)
chr2 (1-127)||(19356770-19356880)
chr2 (1-58)||(6081677-6081734)
chr2 (1-54)||(22764179-22764232)
chr2 (78-126)||(6081625-6081673)
chr2 (78-126)||(36784535-36784583)
chr2 (76-127)||(967215-967266)
chr2 (24-98)||(21025199-21025274)
chr2 (1-58)||(967156-967213)
chr2 (1-90)||(23392384-23392473)
chr2 (1-58)||(36784474-36784531)
chr2 (9-58)||(20417323-20417372)
chr2 (1-54)||(22774883-22774936)
chr2 (1-54)||(22780261-22780314)
chr2 (9-58)||(27978062-27978111)
chr2 (9-58)||(28064591-28064640)
chr2 (9-58)||(38585765-38585814)
chr2 (18-58)||(24414710-24414750)
chr2 (18-58)||(24425222-24425262)
chr2 (18-58)||(26867590-26867630)
chr2 (18-58)||(26880179-26880219)
chr2 (79-125)||(24414755-24414799)
chr2 (79-125)||(24425267-24425311)
chr2 (79-125)||(26867541-26867585)
chr2 (27-98)||(28700947-28701018)
chr2 (79-125)||(18768638-18768683)
chr2 (79-109)||(20417377-20417407)
chr2 (79-125)||(21172181-21172226)
chr2 (79-109)||(26880144-26880174)
chr2 (79-109)||(28374229-28374259)
chr2 (79-109)||(28379568-28379598)
chr2 (79-125)||(28721048-28721093)
chr2 (79-125)||(28731636-28731681)
chr2 (76-109)||(22774843-22774876)
chr2 (76-109)||(22780221-22780254)
chr2 (18-59)||(28374184-28374225)
chr2 (18-59)||(28379523-28379564)
chr2 (18-58)||(18768593-18768633)
chr2 (18-58)||(30795259-30795299)
chr2 (79-126)||(38585819-38585864)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-106)||(9596-9701)
[»] chr8 (62 HSPs)
chr8 (21-129)||(19461446-19461554)
chr8 (21-129)||(19559124-19559232)
chr8 (1-125)||(28903746-28903870)
chr8 (1-106)||(40003491-40003596)
chr8 (1-126)||(20259303-20259412)
chr8 (1-126)||(21045933-21046042)
chr8 (27-106)||(21541272-21541351)
chr8 (1-129)||(22211073-22211185)
chr8 (1-137)||(23371039-23371159)
chr8 (1-129)||(23380806-23380918)
chr8 (1-106)||(8032313-8032418)
chr8 (1-106)||(18534814-18534919)
chr8 (1-127)||(3833227-3833337)
chr8 (1-126)||(3844008-3844117)
chr8 (1-126)||(7018085-7018194)
chr8 (24-93)||(17518831-17518901)
chr8 (1-98)||(29379881-29379978)
chr8 (24-106)||(23270921-23271004)
chr8 (1-58)||(22135543-22135600)
chr8 (77-129)||(22135603-22135656)
chr8 (1-58)||(22166692-22166749)
chr8 (77-129)||(22166752-22166805)
chr8 (1-58)||(3844351-3844408)
chr8 (77-125)||(23783817-23783866)
chr8 (78-126)||(22623113-22623161)
chr8 (27-98)||(1237960-1238031)
chr8 (76-126)||(3844299-3844349)
chr8 (77-125)||(18158744-18158790)
chr8 (9-58)||(18768813-18768862)
chr8 (77-125)||(18768866-18768912)
chr8 (9-58)||(23269586-23269635)
chr8 (9-58)||(40212852-40212901)
chr8 (18-58)||(16747555-16747595)
chr8 (18-58)||(23457005-23457045)
chr8 (18-58)||(23469161-23469201)
chr8 (18-58)||(26734717-26734757)
chr8 (79-125)||(16747506-16747550)
chr8 (18-57)||(18158794-18158833)
chr8 (27-98)||(19927337-19927408)
chr8 (79-125)||(20160977-20161021)
chr8 (79-125)||(20196446-20196490)
chr8 (79-125)||(23269640-23269684)
chr8 (79-125)||(26734762-26734806)
chr8 (79-125)||(30314444-30314488)
chr8 (79-125)||(19225422-19225467)
chr8 (1-58)||(23783869-23783927)
chr8 (77-106)||(1745437-1745466)
chr8 (82-126)||(18154224-18154266)
chr8 (1-54)||(22623052-22623105)
chr8 (79-108)||(28691386-28691415)
chr8 (79-108)||(30325058-30325087)
chr8 (79-108)||(31215536-31215565)
chr8 (18-58)||(18154273-18154313)
chr8 (80-108)||(19418856-19418884)
chr8 (80-108)||(19429433-19429461)
chr8 (27-98)||(15335830-15335901)
chr8 (27-98)||(15424895-15424966)
chr8 (27-98)||(15516199-15516270)
chr8 (27-98)||(24832843-24832914)
chr8 (27-58)||(30421231-30421262)
chr8 (79-125)||(40212906-40212950)
chr8 (27-98)||(45538243-45538314)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-129)||(17501-17628)
[»] scaffold0017 (4 HSPs)
scaffold0017 (1-129)||(40008-40135)
scaffold0017 (78-126)||(180711-180759)
scaffold0017 (1-54)||(175855-175908)
scaffold0017 (78-126)||(175799-175847)
[»] chr3 (108 HSPs)
chr3 (1-129)||(27173295-27173422)
chr3 (1-129)||(31113609-31113737)
chr3 (24-106)||(13148569-13148651)
chr3 (1-127)||(21736600-21736710)
chr3 (1-129)||(23680050-23680163)
chr3 (1-129)||(24052287-24052400)
chr3 (1-125)||(10529604-10529727)
chr3 (8-98)||(17022336-17022426)
chr3 (1-126)||(2246858-2246967)
chr3 (27-106)||(11908755-11908834)
chr3 (1-58)||(13198876-13198933)
chr3 (27-106)||(12752391-12752470)
chr3 (1-92)||(22151563-22151654)
chr3 (1-98)||(41046021-41046118)
chr3 (1-58)||(15650722-15650779)
chr3 (1-58)||(15662357-15662414)
chr3 (1-58)||(17281066-17281123)
chr3 (78-126)||(1064630-1064678)
chr3 (78-126)||(16077421-16077469)
chr3 (78-126)||(16670857-16670905)
chr3 (78-126)||(17281127-17281175)
chr3 (78-129)||(15662418-15662469)
chr3 (24-93)||(51988794-51988867)
chr3 (75-125)||(13977993-13978043)
chr3 (75-125)||(15833664-15833714)
chr3 (75-125)||(15851210-15851260)
chr3 (1-43)||(16665760-16665802)
chr3 (1-58)||(8739761-8739818)
chr3 (1-58)||(9091999-9092056)
chr3 (1-58)||(14581674-14581731)
chr3 (1-58)||(16077473-16077530)
chr3 (1-58)||(16670796-16670853)
chr3 (1-54)||(29905821-29905874)
chr3 (1-54)||(29933216-29933269)
chr3 (1-54)||(29946986-29947039)
chr3 (1-54)||(29982370-29982423)
chr3 (1-54)||(29996140-29996193)
chr3 (79-126)||(4457391-4457436)
chr3 (78-126)||(8739822-8739870)
chr3 (78-126)||(8758193-8758241)
chr3 (78-126)||(9092060-9092108)
chr3 (78-126)||(14581622-14581670)
chr3 (82-126)||(16665825-16665869)
chr3 (78-129)||(15650783-15650834)
chr3 (27-98)||(51341348-51341419)
chr3 (1-58)||(1054236-1054292)
chr3 (1-58)||(1064682-1064738)
chr3 (1-58)||(8758133-8758189)
chr3 (9-58)||(14254055-14254104)
chr3 (9-58)||(14321341-14321390)
chr3 (1-58)||(15226633-15226690)
chr3 (78-126)||(27883857-27883903)
chr3 (9-58)||(27883907-27883956)
chr3 (76-109)||(29905881-29905914)
chr3 (76-109)||(29933276-29933309)
chr3 (76-109)||(29947046-29947079)
chr3 (76-109)||(29982430-29982463)
chr3 (76-109)||(29996200-29996233)
chr3 (78-126)||(1054184-1054232)
chr3 (79-126)||(4404748-4404793)
chr3 (18-58)||(4404798-4404838)
chr3 (18-58)||(4457441-4457481)
chr3 (18-58)||(11168000-11168040)
chr3 (18-58)||(11216390-11216430)
chr3 (78-125)||(15226694-15226739)
chr3 (18-58)||(18851360-18851400)
chr3 (18-58)||(38315233-38315273)
chr3 (79-125)||(7608039-7608083)
chr3 (79-125)||(11216435-11216479)
chr3 (7-58)||(17961885-17961936)
chr3 (27-106)||(20627269-20627347)
chr3 (70-109)||(28169555-28169594)
chr3 (79-125)||(29460927-29460971)
chr3 (79-125)||(29471779-29471823)
chr3 (79-125)||(934104-934149)
chr3 (79-109)||(9390933-9390963)
chr3 (7-57)||(18006790-18006840)
chr3 (79-125)||(19887067-19887112)
chr3 (79-125)||(23636187-23636232)
chr3 (79-125)||(24706268-24706313)
chr3 (9-55)||(28169593-28169639)
chr3 (79-108)||(1783784-1783813)
chr3 (79-108)||(1794196-1794225)
chr3 (1-54)||(8995589-8995642)
chr3 (1-54)||(9006141-9006194)
chr3 (80-125)||(9536068-9536112)
chr3 (79-108)||(13604737-13604766)
chr3 (1-58)||(15216010-15216067)
chr3 (33-106)||(41495265-41495337)
chr3 (27-96)||(46349617-46349686)
chr3 (29-98)||(47405243-47405311)
chr3 (80-125)||(48337718-48337762)
chr3 (18-54)||(1783739-1783775)
chr3 (18-54)||(1794151-1794187)
chr3 (18-58)||(7794258-7794298)
chr3 (18-58)||(7804214-7804254)
chr3 (80-108)||(7804260-7804288)
chr3 (79-107)||(8995651-8995679)
chr3 (18-54)||(9380325-9380361)
chr3 (18-54)||(9390888-9390924)
chr3 (79-126)||(14254109-14254154)
chr3 (18-58)||(17909670-17909710)
chr3 (18-54)||(19887022-19887058)
chr3 (18-58)||(48337768-48337808)
chr3 (79-126)||(9006203-9006250)
chr3 (78-109)||(15216071-15216102)
chr3 (27-98)||(29855725-29855796)
chr3 (27-98)||(49990570-49990641)
[»] scaffold0185 (1 HSPs)
scaffold0185 (1-129)||(9585-9712)
[»] scaffold0012 (6 HSPs)
scaffold0012 (1-129)||(7311-7440)
scaffold0012 (1-55)||(128156-128210)
scaffold0012 (1-55)||(141332-141386)
scaffold0012 (76-109)||(128118-128151)
scaffold0012 (76-108)||(141295-141327)
scaffold0012 (30-98)||(215224-215292)
[»] scaffold0254 (1 HSPs)
scaffold0254 (38-129)||(22313-22404)
[»] scaffold0547 (1 HSPs)
scaffold0547 (1-129)||(1172-1284)
[»] chr7 (51 HSPs)
chr7 (1-141)||(24882135-24882259)
chr7 (1-106)||(13174317-13174422)
chr7 (1-126)||(26209280-26209389)
chr7 (24-106)||(8998667-8998750)
chr7 (1-129)||(13682777-13682889)
chr7 (1-129)||(15216773-15216885)
chr7 (1-106)||(11086771-11086876)
chr7 (1-126)||(8933980-8934089)
chr7 (1-126)||(12733898-12734007)
chr7 (1-58)||(3476055-3476112)
chr7 (1-58)||(18419644-18419701)
chr7 (1-58)||(18441725-18441782)
chr7 (1-54)||(29590524-29590577)
chr7 (1-58)||(48382674-48382731)
chr7 (1-58)||(6043942-6043999)
chr7 (29-106)||(19710793-19710870)
chr7 (78-126)||(6044003-6044051)
chr7 (78-126)||(18419592-18419640)
chr7 (78-126)||(18441673-18441721)
chr7 (76-129)||(3476114-3476166)
chr7 (1-58)||(19193410-19193467)
chr7 (78-128)||(38593528-38593576)
chr7 (81-126)||(29590452-29590497)
chr7 (9-58)||(38593475-38593524)
chr7 (18-58)||(25201332-25201372)
chr7 (78-125)||(25201376-25201421)
chr7 (79-125)||(3166196-3166240)
chr7 (78-109)||(19193375-19193406)
chr7 (79-125)||(44280958-44281002)
chr7 (79-125)||(589691-589736)
chr7 (80-125)||(1368091-1368135)
chr7 (79-108)||(9261574-9261603)
chr7 (79-108)||(20491466-20491495)
chr7 (80-125)||(21769737-21769781)
chr7 (79-108)||(24244262-24244291)
chr7 (79-108)||(30049996-30050025)
chr7 (79-108)||(31116304-31116333)
chr7 (9-58)||(40054493-40054542)
chr7 (77-106)||(48805696-48805725)
chr7 (18-58)||(1368141-1368181)
chr7 (80-108)||(9160207-9160235)
chr7 (18-58)||(9160241-9160281)
chr7 (80-108)||(9170662-9170690)
chr7 (18-58)||(9170696-9170736)
chr7 (80-108)||(9171463-9171491)
chr7 (18-58)||(9171497-9171537)
chr7 (18-58)||(21769691-21769731)
chr7 (18-54)||(31116259-31116295)
chr7 (27-98)||(9709625-9709695)
chr7 (27-98)||(14426810-14426880)
chr7 (79-125)||(40054547-40054591)
[»] scaffold0002 (3 HSPs)
scaffold0002 (24-106)||(156351-156433)
scaffold0002 (1-106)||(481488-481593)
scaffold0002 (18-58)||(117623-117663)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-129)||(36007-36119)
[»] scaffold0655 (1 HSPs)
scaffold0655 (24-106)||(5421-5503)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-106)||(6214-6318)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-126)||(70070-70179)
[»] scaffold0774 (1 HSPs)
scaffold0774 (1-129)||(6038-6150)
[»] scaffold1321 (1 HSPs)
scaffold1321 (1-106)||(626-731)
[»] scaffold1263 (1 HSPs)
scaffold1263 (1-106)||(819-924)
[»] scaffold0422 (1 HSPs)
scaffold0422 (29-125)||(12021-12117)
[»] scaffold0410 (1 HSPs)
scaffold0410 (1-129)||(7010-7122)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-129)||(15337-15449)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-106)||(62019-62124)
scaffold0010 (1-106)||(117580-117685)
[»] scaffold0604 (2 HSPs)
scaffold0604 (1-58)||(271-328)
scaffold0604 (76-129)||(216-269)
[»] scaffold0269 (1 HSPs)
scaffold0269 (27-106)||(7600-7679)
[»] scaffold0163 (4 HSPs)
scaffold0163 (78-129)||(29946-29997)
scaffold0163 (1-54)||(29996-30049)
scaffold0163 (80-125)||(36535-36579)
scaffold0163 (18-58)||(36489-36529)
[»] scaffold0739 (2 HSPs)
scaffold0739 (1-58)||(2518-2575)
scaffold0739 (76-129)||(2464-2516)
[»] scaffold0481 (2 HSPs)
scaffold0481 (1-58)||(12498-12555)
scaffold0481 (78-126)||(12559-12607)
[»] scaffold0201 (4 HSPs)
scaffold0201 (1-54)||(7759-7812)
scaffold0201 (76-109)||(7719-7752)
scaffold0201 (9-58)||(7197-7246)
scaffold0201 (79-125)||(7148-7192)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-129)||(163595-163708)
[»] scaffold0908 (1 HSPs)
scaffold0908 (27-98)||(3611-3682)
[»] scaffold0497 (2 HSPs)
scaffold0497 (78-129)||(10022-10073)
scaffold0497 (1-58)||(9961-10018)
[»] scaffold0050 (1 HSPs)
scaffold0050 (27-90)||(35512-35575)
[»] scaffold0042 (4 HSPs)
scaffold0042 (78-129)||(5749-5800)
scaffold0042 (78-129)||(13161-13212)
scaffold0042 (1-58)||(5804-5861)
scaffold0042 (1-58)||(13216-13273)
[»] scaffold1102 (2 HSPs)
scaffold1102 (1-58)||(2768-2825)
scaffold1102 (78-126)||(2829-2877)
[»] scaffold0407 (4 HSPs)
scaffold0407 (1-58)||(11789-11846)
scaffold0407 (78-126)||(11850-11898)
scaffold0407 (78-126)||(15681-15729)
scaffold0407 (1-58)||(15620-15677)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-127)||(58982-59092)
[»] scaffold0073 (2 HSPs)
scaffold0073 (76-127)||(58757-58808)
scaffold0073 (1-58)||(58810-58867)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-93)||(61522-61614)
scaffold0005 (18-58)||(3898-3938)
[»] scaffold0207 (1 HSPs)
scaffold0207 (27-106)||(20932-21011)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-125)||(1382-1507)
[»] scaffold0414 (2 HSPs)
scaffold0414 (18-59)||(2811-2852)
scaffold0414 (79-125)||(2763-2807)
[»] scaffold0226 (4 HSPs)
scaffold0226 (9-58)||(18899-18948)
scaffold0226 (77-125)||(18952-18998)
scaffold0226 (9-58)||(28293-28342)
scaffold0226 (77-125)||(28346-28392)
[»] scaffold1477 (2 HSPs)
scaffold1477 (78-125)||(1429-1474)
scaffold1477 (9-58)||(1376-1425)
[»] scaffold1204 (2 HSPs)
scaffold1204 (18-58)||(2125-2165)
scaffold1204 (78-125)||(2169-2214)
[»] scaffold0767 (2 HSPs)
scaffold0767 (18-58)||(5099-5139)
scaffold0767 (79-125)||(5050-5094)
[»] scaffold0272 (4 HSPs)
scaffold0272 (18-58)||(12993-13033)
scaffold0272 (18-58)||(13298-13338)
scaffold0272 (79-125)||(13038-13082)
scaffold0272 (79-125)||(13343-13387)
[»] scaffold0216 (1 HSPs)
scaffold0216 (18-58)||(464-504)
[»] scaffold0178 (1 HSPs)
scaffold0178 (79-126)||(27179-27224)
[»] scaffold0177 (1 HSPs)
scaffold0177 (77-125)||(20179-20227)
[»] scaffold0077 (2 HSPs)
scaffold0077 (18-58)||(34850-34890)
scaffold0077 (78-125)||(34894-34939)
[»] scaffold0072 (2 HSPs)
scaffold0072 (18-58)||(36426-36466)
scaffold0072 (79-125)||(36471-36515)
[»] scaffold0439 (1 HSPs)
scaffold0439 (27-98)||(6449-6520)
[»] scaffold0314 (1 HSPs)
scaffold0314 (79-125)||(20510-20554)
[»] scaffold0084 (2 HSPs)
scaffold0084 (19-58)||(56472-56511)
scaffold0084 (78-129)||(56515-56566)
[»] scaffold0068 (3 HSPs)
scaffold0068 (79-125)||(7507-7551)
scaffold0068 (79-125)||(10371-10415)
scaffold0068 (18-55)||(10326-10363)
[»] scaffold0210 (1 HSPs)
scaffold0210 (24-58)||(1969-2003)
[»] scaffold0047 (2 HSPs)
scaffold0047 (79-109)||(32640-32670)
scaffold0047 (18-58)||(32595-32635)
[»] scaffold0387 (1 HSPs)
scaffold0387 (77-106)||(7681-7710)
[»] scaffold0217 (1 HSPs)
scaffold0217 (33-98)||(19334-19398)
[»] scaffold0102 (1 HSPs)
scaffold0102 (9-58)||(51784-51833)
[»] scaffold0028 (2 HSPs)
scaffold0028 (79-108)||(53894-53923)
scaffold0028 (27-98)||(5326-5397)
[»] scaffold0627 (1 HSPs)
scaffold0627 (18-58)||(7788-7828)
[»] scaffold0391 (1 HSPs)
scaffold0391 (18-58)||(1927-1967)
[»] scaffold0290 (1 HSPs)
scaffold0290 (26-58)||(18361-18393)
[»] scaffold0267 (1 HSPs)
scaffold0267 (18-58)||(5910-5950)
[»] scaffold0133 (2 HSPs)
scaffold0133 (18-58)||(42211-42251)
scaffold0133 (80-108)||(42257-42285)
[»] scaffold2108 (2 HSPs)
scaffold2108 (80-127)||(54-100)
scaffold2108 (19-58)||(106-145)
[»] scaffold1359 (1 HSPs)
scaffold1359 (27-98)||(429-499)
[»] scaffold0452 (1 HSPs)
scaffold0452 (27-98)||(1608-1679)
[»] scaffold0297 (1 HSPs)
scaffold0297 (35-90)||(17297-17352)
[»] scaffold0132 (1 HSPs)
scaffold0132 (27-106)||(37784-37862)
[»] scaffold0003 (1 HSPs)
scaffold0003 (27-58)||(89812-89843)


Alignment Details
Target: chr4 (Bit Score: 121; Significance: 2e-62; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 2e-62
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18774318 - 18774446
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18774318 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatatgaagaaaactgcgt 18774417  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||||||||||||||    
T  18774418 ctgaagctatgaagtgtttctgaagtttc 18774446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 16819014 - 16819142
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  16819014 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggacccatcaagaagaggaacctaaagcatctgaagaaaactgcgt 16819113  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  16819114 ctgaagctatgaagtgcttctgaagtttc 16819142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 19244394 - 19244267
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  19244394 cataggcaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacctaaagcatctgaagaaaactgcgt 19244296  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||| | ||||||| ||||||||||||    
T  19244295 ctgaagttttgaagtgcttctgaagtttc 19244267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18006694 - 18006798
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  18006694 cataggcaaagttgatcaatt-caataggtcttggaagaacaaaagagagcaaaggaaccatcaataagaggaacctaaagcatctgaagaaaactgcgt 18006792  T
Q  101 ctgaag 106  Q
    ||||||    
T  18006793 ctgaag 18006798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 49001636 - 49001745
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || |||||||||||||||||||||||||    
T  49001636 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaactgcgt 49001719  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  49001720 ctgaagctatgaagtgcttctgaagt 49001745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 33378819 - 33378720
Alignment:
Q  7 caaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||| || || || ||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||||||||| |||||| |||| |||||||    
T  33378819 caaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaaacctaaagcatctaaagaaatctgcctctgaag 33378720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23509737 - 23509624
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||               | |||||||||||||||||||||||||    
T  23509737 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatagagagcaaaagaa---------------agctaaagcatctgaagaaaactgcgt 23509653  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  23509652 ctgaagctatgaagtgcttctgaagtttc 23509624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 55651926 - 55651817
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  55651926 catatgcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 55651843  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  55651842 ctgaagctatgaagtgcttctgaagt 55651817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 36209790 - 36209873
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||||||||||||||||||||| |||||| || ||||||||| |||||| |||| |||||||||| |||| |||||||    
T  36209790 aataggtcttggaagaacaaaagagagctaaggaatcaacaagaagagaaacctagaagcgtctgaagaaatctgcctctgaag 36209873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17993486 - 17993576
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaaga 91  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| || |  |||||| |||||| |||||||||||||    
T  17993486 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaaga 17993576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 39525861 - 39525909
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  39525861 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 39525909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 8996984 - 8997031
Alignment:
Q  82 catctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  8996984 catctgaagaaaactgcgtctgaagctatgaagtgcttctaaagtttc 8997031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11515654 - 11515597
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||  |||||||||||||    
T  11515654 cataggcaaagtcaatcaatttcaataggtcttgaaagaacaatggagagcaaaggaa 11515597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11519686 - 11519629
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||  |||||||||||||    
T  11519686 cataggcaaagtcaatcaatttcaataggtcttgaaagaacaatggagagcaaaggaa 11519629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14778116 - 14778208
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaa 93  Q
    ||||| ||||||| || ||||| |||||||||| ||| |||||||||||||||||||| || |  |||||| |||||| |||||||||||||||    
T  14778116 catagacaaagttgatcaattt-aataggtcttagaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaa 14778208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31266454 - 31266511
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||  |||||||||||||    
T  31266454 cataggcaaagtcaatcaatttcaataggttttggaagaacaatggagagcaaaggaa 31266511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39525800 - 39525857
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||  |||||||||||||    
T  39525800 cataggcaaagtcaattaatttcattaggtcttggaagaacaatggagagcaaaggaa 39525857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 11515593 - 11515545
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||    
T  11515593 aaagcatctgaagaaaactgcgtctgaagctaagaaatgcttctgaagt 11515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 11519625 - 11519577
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||||    
T  11519625 aaagcatctgaagaaaactgcgtctgaagctaagaaatgcttctgaagt 11519577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 11536404 - 11536356
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  11536404 aaagaatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 11536356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11536465 - 11536411
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||  ||||||||||    
T  11536465 catagggaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaag 11536411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 4987875 - 4987834
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaac 59  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  4987875 aatttcaataggtcttggaagaacaatggagagcaaaggaac 4987834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 5873980 - 5873931
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  5873980 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 5873931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8996918 - 8996975
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||| ||| ||| | |||||||||||||||||||||||||| ||||||||| ||||    
T  8996918 cataggaaaaattattcaatttcaataggtcttggaagaacaatagagagcaatggaa 8996975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 10696219 - 10696170
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  10696219 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 10696170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 10909988 - 10909939
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  10909988 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 10909939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 24714035 - 24713986
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  24714035 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 24713986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 47151742 - 47151791
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  47151742 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 47151791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 3391045 - 3391005
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  3391045 aatttcaataggtcttggaagaacaatggagagcaaaggaa 3391005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 5873927 - 5873882
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  5873927 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 5873882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 10301093 - 10301045
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||||||||||| || |||||| || ||||||    
T  10301093 aaagcatctgaagaaaactgcgtctgaagttaagaagtgcttatgaagt 10301045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 15207071 - 15207111
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  15207071 aatttcaataggtcttggaagaacaatggagagcaaaggaa 15207111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 15207115 - 15207160
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  15207115 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 15207160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 17198096 - 17198136
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  17198096 aatttcaataggtcttggaagaacaatggagagcaaaggaa 17198136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 19581843 - 19581803
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  19581843 aatttcaataggtcttggaagaacaatggagagcaaaggaa 19581803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 31266515 - 31266563
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||| ||||||||||||||||||| |||||| |||| ||||    
T  31266515 aaagcatctgaataaaactgcgtctgaagctaagaagtgcttctaaagt 31266563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 47151797 - 47151842
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  47151797 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 47151842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 109
Target Start/End: Complemental strand, 16305647 - 16305616
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||    
T  16305647 aaagcatctgaagaaaactgcgtctgaagcta 16305616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 19581798 - 19581754
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  19581798 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 19581754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 25657676 - 25657632
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  25657676 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 25657632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 40454068 - 40454112
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  40454068 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 40454112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 40470324 - 40470368
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  40470324 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 40470368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 8182594 - 8182639
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  8182594 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 8182639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 14835806 - 14835836
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  14835806 aagcatctgaagaaaactgcgtctgaagcta 14835836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 18077624 - 18077669
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  18077624 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 18077669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Complemental strand, 24713981 - 24713951
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  24713981 aagcatctgaagaaaactgcgtctgaagcta 24713951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 106
Target Start/End: Original strand, 3499442 - 3499471
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||    
T  3499442 taaagcatctgaagaaaactgcgtctgaag 3499471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10301154 - 10301101
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||| ||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  10301154 catatgcaaagtcattcaatttcaataggtcttggaagaacaatggagagcaaa 10301101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 25009319 - 25009290
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  25009319 aagcatctgaagaaaactgcgtctgaagct 25009290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 14835761 - 14835801
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  14835761 aatttcaataggtcttggaagaacaatgtagagcaaaggaa 14835801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 15474944 - 15474992
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||| |||||||||||||| ||||||||| ||||||||| | ||||||    
T  15474944 taaagaatctgaagaaaactacgtctgaagttatgaagtgctcctgaag 15474992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 16305691 - 16305651
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||| |||||||||||  |||||||||||||    
T  16305691 aatttcaataggtcgtggaagaacaatggagagcaaaggaa 16305651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 16317916 - 16317876
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||| |||||||||||  |||||||||||||    
T  16317916 aatttcaataggtcgtggaagaacaatggagagcaaaggaa 16317876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 17198140 - 17198185
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||| |||||||||||  ||||| ||||||||    
T  17198140 aaagcatctgaagaaaactgtgtctgaagcta--aagtgcttctgaag 17198185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 25009364 - 25009328
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  25009364 aatttcaataggtcttggaagaacaatggagagcaaa 25009328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 13575892 - 13575962
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| |||||||||| ||| || ||| ||| | | | |||||| |||||||||||||||    
T  13575892 aggtcttggaagaacaatagagagcaaatgaatcaacaaaaag-gaagcttaaagcgtctgaagaaaactgc 13575962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 58
Target Start/End: Original strand, 22675298 - 22675329
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||| ||||||||||||||    
T  22675298 aggtcttggaagaacaatagagagcaaaggaa 22675329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 29121738 - 29121667
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||| | |||||||||||||||    
T  29121738 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaaacgtctgaagaaaactgc 29121667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 117; Significance: 5e-60; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 117; E-Value: 5e-60
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 2414 - 2290
Alignment:
Q  4 aggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctg 103  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2414 aggcaaagttaatcaatttcaataggtcttggaagaataaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctg 2315  T
Q  104 aagctatgaagtgtttctgaagttt 128  Q
    |||||||||||||||||||||||||    
T  2314 aagctatgaagtgtttctgaagttt 2290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 1e-57; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 1e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36096847 - 36096975
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  36096847 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatatgaagaaaactgcgt 36096946  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  36096947 ctgaagctatgaagtgcttctgaagtttc 36096975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36095390 - 36095518
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  36095390 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatatgaagaaaactgcgt 36095489  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
     ||||||||||||||| ||||||||||||    
T  36095490 ttgaagctatgaagtgcttctgaagtttc 36095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 20167828 - 20167949
Alignment:
Q  7 caaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  20167828 caaagttaatcaatt-caatatgtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatctgaagaaaactgcatctgaag 20167926  T
Q  107 ctatgaagtgtttctgaagtttc 129  Q
     ||||||||||||||||||||||    
T  20167927 ttatgaagtgtttctgaagtttc 20167949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40229062 - 40228957
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||| ||||     
T  40229062 catagacaaagttaatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcc 40228964  T
Q  100 tctgaag 106  Q
    |||||||    
T  40228963 tctgaag 40228957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13523590 - 13523480
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||                ||||||||||||||||||||||||    
T  13523590 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagaaacc----------------taaagcatctgaagaaaactgcgt 13523507  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||||||||||||||    
T  13523506 ctgaagctatgaagtgtttctgaagtt 13523480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13534317 - 13534207
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  13534317 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 13534234  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||||||||||||||    
T  13534233 ctgaagctatgaagtgtttctgaagtt 13534207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 35542864 - 35542974
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||                ||||||||||||||||||||||||    
T  35542864 cataggcaaagttattcaatttcaataggtcttggaagaacaatagagagcaaaggaacc----------------taaagcatctgaagaaaactgcgt 35542947  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||||||||||||||    
T  35542948 ctgaagctatgaagtgtttctgaagtt 35542974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20214850 - 20214947
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgc 98  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||| ||||    
T  20214850 catagacaaagttaattaattt-aataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctagaagcatctgaagaaatctgc 20214947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 23478740 - 23478642
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| | |||||||||||||||||||||||||||| ||||  ||||||| | ||||||    
T  23478740 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaagaaaactgcgtctcaagcgttgaagtgctcctgaag 23478642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 1915781 - 1915697
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaagc 107  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| || ||| ||||||||||||||| |||| ||||||||    
T  1915781 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaatctagaagcatctgaagaaatctgcctctgaagc 1915697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 40032509 - 40032608
Alignment:
Q  7 caaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaa 105  Q
    ||||||| || ||||| |||| |||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||| |||| ||||||    
T  40032509 caaagttgatcaattt-aataagtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctgaa 40032607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 13405489 - 13405384
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||    |||||| |||||| ||||||||||||||| ||||     
T  13405489 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaatgtgaagagaaacctagaagcatctgaagaaatctgcc 13405391  T
Q  100 tctgaag 106  Q
    |||||||    
T  13405390 tctgaag 13405384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32754454 - 32754397
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  32754454 catatgcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaa 32754397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 20416732 - 20416782
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  20416732 ctaaagcatctgaagaaaactgcgtctgaagctataaagtgcttctgaagt 20416782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21414705 - 21414648
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  21414705 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 21414648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 105949 - 105997
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  105949 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 105997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 21414644 - 21414596
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  21414644 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 21414596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20416673 - 20416727
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||    
T  20416673 cataggcaaagttaatcaatttcaattggttttggaagaacaatagagagcaaag 20416727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 105888 - 105945
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  105888 cataggcaaagtcaatcaatctcaataggtcttggaagaacaatggagagcaaaggaa 105945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 32754395 - 32754342
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||| ||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  32754395 ctaaaacatctgaagaaaactgcatctgaagttatgaagtgcttctgaagtttc 32754342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 20624580 - 20624627
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  20624580 aaagcatctgaagaaaactgcgtctgaagcta-aaagtgtttctgaagt 20624627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 33933669 - 33933598
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| |||||||||||||| || ||| ||||| | | |||| | |||||||||||||||    
T  33933669 aggtcttggaagaacaatagagagcaaaggaatcaacaaaaagagaagcttaaatcgtctgaagaaaactgc 33933598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 37406418 - 37406467
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  37406418 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 37406467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 17447185 - 17447145
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  17447185 aatttcaataggtcttggaagaacaatggagagcaaaggaa 17447145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 17457801 - 17457761
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  17457801 aatttcaataggtcttggaagaacaatggagagcaaaggaa 17457761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 19463743 - 19463783
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  19463743 aatttcaataggtcttggaagaacaatggagagcaaaggaa 19463783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 19477773 - 19477813
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  19477773 aatttcaataggtcttggaagaacaatggagagcaaaggaa 19477813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 21660539 - 21660491
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  21660539 taaagcgtctgaagaaaactgcgtctgaagttatgaagtgctcctgaag 21660491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 24926612 - 24926572
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  24926612 aatttcaataggtcttggaagaacaaaggaaagcaaaggaa 24926572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 24983910 - 24983870
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  24983910 aatttcaataggtcttggaagaacaaaggaaagcaaaggaa 24983870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 34062408 - 34062448
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  34062408 aatttcaataggtcttggaagaacaatggagagcaaaggaa 34062448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 42394831 - 42394876
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||    
T  42394831 aagcatctgaagaaaactgcgtctgaagc--tgaagtgcttctgaagt 42394876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 1109572 - 1109528
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  1109572 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 1109528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 4887370 - 4887303
Alignment:
Q  30 tcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactg 97  Q
    |||||||||||||| |||||||||||||| || ||| ||| | | | |||||| ||||||||||||||    
T  4887370 tcttggaagaacaatagagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactg 4887303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 11207724 - 11207803
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||| ||| || ||  || ||  ||||| | |||||||| ||||||||||||||| |||||||    
T  11207724 aggtcttggaagaacaaaagaaagcgaaagattcaacataaagagaagcctaaagcgtctgaagaaaactgcctctgaag 11207803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 11994281 - 11994210
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    |||||||||||||||||   |||||||||||| || ||| ||| | | | ||||||||||||||||||||||    
T  11994281 aggtcttggaagaacaattaagagcaaaggaatcaacaaaaagggaagcttaaagcatctgaagaaaactgc 11994210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 17447140 - 17447096
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  17447140 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 17447096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 17457756 - 17457712
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  17457756 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 17457712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 21703539 - 21703495
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  21703539 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 21703495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 21706403 - 21706359
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  21706403 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 21706359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 20624523 - 20624573
Alignment:
Q  5 ggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    |||||||| ||| ||||||||| ||||||||||||||||  ||||||||||    
T  20624523 ggcaaagtcaatcaatttcaatgggtcttggaagaacaatggagagcaaag 20624573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 20797528 - 20797573
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  20797528 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 20797573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 23392532 - 23392562
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  23392532 aagcatctgaagaaaactgcgtctgaagcta 23392562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 23406279 - 23406309
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  23406279 aagcatctgaagaaaactgcgtctgaagcta 23406309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 31448369 - 31448399
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  31448369 aagcatctgaagaaaactgcgtctgaagcta 31448399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 34051792 - 34051822
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  34051792 aagcatctgaagaaaactgcgtctgaagcta 34051822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 34062453 - 34062483
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  34062453 aagcatctgaagaaaactgcgtctgaagcta 34062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 21517560 - 21517589
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  21517560 aagcatctgaagaaaactgcgtctgaagct 21517589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 21519893 - 21519922
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  21519893 aagcatctgaagaaaactgcgtctgaagct 21519922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 21703584 - 21703547
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  21703584 aatttcaataggtcttggaagaacaatggagagcaaag 21703547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 24983864 - 24983820
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  24983864 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 24983820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 36084295 - 36084339
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||    
T  36084295 agcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 36084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 43622297 - 43622253
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  43622297 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 43622253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 20551603 - 20551643
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  20551603 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 20551643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 20551649 - 20551677
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  20551649 agcatctgaagaaaactgcgtctgaagct 20551677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 20562111 - 20562151
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  20562111 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 20562151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 21517515 - 21517551
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  21517515 aatttcaataggtcttggaagaacaatggagagcaaa 21517551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 23392487 - 23392527
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  23392487 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 23392527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 23406234 - 23406274
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  23406234 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 23406274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 34051747 - 34051787
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  ||||| |||||||    
T  34051747 aatttcaataggtcttggaagaacaatggagagtaaaggaa 34051787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 36084249 - 36084289
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  36084249 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 36084289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 43622343 - 43622303
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  43622343 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 43622303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 1122330 - 1122286
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||| |||||||||||||  ||||| ||||||||    
T  1122330 aagcatctgaagaaaaccgcgtctgaagcta--aagtgcttctgaag 1122286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 8521675 - 8521719
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||| |||||||||||  ||||| ||||||||    
T  8521675 aagcatctgaagaaaactgtgtctgaagcta--aagtgcttctgaag 8521719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 37406472 - 37406516
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  37406472 aagcatctcaagaaaactgcgtctgaagcta--aagtgcttctgaag 37406516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 3e-55; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 3e-55
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 45070317 - 45070444
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45070317 cataggcaatgttaatcaatt-caataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatctgaagaaaactgcgt 45070415  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||||||||||||||    
T  45070416 ctgaagctatgaagtgtttctgaagtttc 45070444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 28474626 - 28474500
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||| ||||||| ||    
T  28474626 cataggcaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacctaaagcatctgaa-aaaactgtgt 28474529  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||  | ||||||| ||||||||||||    
T  28474528 ctgaaattttgaagtgcttctgaagtttc 28474500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 26547929 - 26548034
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || || || ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||| |    
T  26547929 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaagaaatctgcct 26548028  T
Q  101 ctgaag 106  Q
    ||||||    
T  26548029 ctgaag 26548034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 46180573 - 46180683
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                |||||||||||||||||||||| |||||    
T  46180573 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aacctaaagcatctgaagaaaattgcgt 46180656  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||||||||||||||    
T  46180657 ctgaagctatgaagtgtttctgaagtt 46180683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22019743 - 22019638
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacct-aaagcatctgaagaaaactgcg 99  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||| ||||     
T  22019743 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaaagcatctgaagaaatctgcc 22019645  T
Q  100 tctgaag 106  Q
    |||||||    
T  22019644 tctgaag 22019638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 22655886 - 22655789
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||| ||||||| || || || ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| |||||||| ||||    
T  22655886 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatttgaagaaatctgc 22655789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22643304 - 22643199
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || || || |||||||||||||||||||||||| |||||||||| ||  |||||||| ||||||||||||||||||||| | || |    
T  22643304 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagaaagcaaaggaatcaaaaagaagagaaacctaaagcatctgaagaaatcggcct 22643205  T
Q  101 ctgaag 106  Q
    ||||||    
T  22643204 ctgaag 22643199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 20799468 - 20799355
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaag-aaaactgcg 99  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || ||||||||||||||| |||||||||    
T  20799468 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaaactgcg 20799385  T
Q  100 tctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||| ||||||||||||    
T  20799384 tctgaagctatgaagtgcttctgaagtttc 20799355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14387803 - 14387862
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaacc 60  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  14387803 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaacc 14387862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 23065319 - 23065236
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||| | || |||||||    
T  23065319 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatcagcatctgaag 23065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 28380379 - 28380296
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||| |||| |||||||    
T  28380379 aataggtcttagaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcctctgaag 28380296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23927431 - 23927318
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||             |||    ||||||||||||||||||||||    
T  23927431 cataggcaaagttaatcaatttcaatagatcttggaagaacaatagagagcaaaggaatt-----------taa----aagcatctgaagaaaactgcgt 23927347  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  23927346 ctgaagctatgaagtgcttctgaagtttc 23927318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22609671 - 22609779
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  22609671 cataggcaaagttaatcaatt-caataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 22609753  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  22609754 ctgaagctatgaagtgcttctgaagt 22609779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18310649 - 18310708
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaacc 60  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  18310649 catagacaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaacc 18310708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 20883620 - 20883671
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20883620 aaagcatctgaagaaaactgcgtctgaagctatgaagtgcttctgaagtttc 20883671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20883558 - 20883612
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  20883558 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaag 20883612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 20866991 - 20867044
Alignment:
Q  5 ggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  20866991 ggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaa 20867044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 52350393 - 52350483
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaaga 91  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| || |  |||||| |||||| |||||||||||||    
T  52350393 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaaga 52350483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 675915 - 675865
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  675915 ctaaagcatctgaaggaaactgcgtctaaagctatgaagtgtttctgaagt 675865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 19038377 - 19038307
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaa 93  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||| |||||| |||||| ||||||||    
T  19038377 aataggtcttggaagaacaaaagaaagcaaaggaatcaacaagaagagaaacctagaagcatatgaagaaa 19038307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 675974 - 675917
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||| || ||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  675974 catagacatagttaagcaatttcaataggtcttggaagaacaatagagagcaaaggaa 675917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 19170054 - 19170119
Alignment:
Q  26 taggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacc-taaagcatctgaag 90  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||| | || ||||||||||||||    
T  19170054 taggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagccttaaagcatctgaag 19170119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 11194806 - 11194854
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  11194806 aaagcatctgaagaaaactgcgtcggaagctaagaagtgcttctgaagt 11194854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 18310710 - 18310758
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||||||||||||| | ||||| |||||||||    
T  18310710 aaagcatctgaagaaaactgcgtctgaagctctaaagtggttctgaagt 18310758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 25448243 - 25448314
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| |||||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  25448243 aggtcttggaagaacaatagagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 25448314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 17371382 - 17371332
Alignment:
Q  75 cctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||| |||||||| ||||||||| | ||||||    
T  17371382 cctaaagcatctgaagaaaactgtgtctgaagttatgaagtgctcctgaag 17371332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 18381675 - 18381722
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  18381675 taaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaagt 18381722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 21544339 - 21544289
Alignment:
Q  75 cctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||| ||||||||||| ||||||||| | ||||||    
T  21544339 cctaaagcatctgaagaaaaatgcgtctgaagttatgaagtgctcctgaag 21544289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 9050173 - 9050222
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  9050173 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 9050222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 21165338 - 21165289
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  21165338 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 21165289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 9050226 - 9050271
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  9050226 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 9050271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 12947185 - 12947137
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||| ||||||||| | |||||| |||||||||    
T  12947185 aaagcatctgaagaaaactgtgtctgaagccaagaagtgcttctgaagt 12947137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 14387864 - 14387912
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||| |||||||||| | ||||| |||||||||    
T  14387864 aaagcatctgaagaaaactgtgtctgaagctctaaagtggttctgaagt 14387912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 21165285 - 21165240
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  21165285 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 21165240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 24253012 - 24252972
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  24253012 aatttcaataggtcttggaagaacaatggagagcaaaggaa 24252972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 39193805 - 39193845
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  39193805 aatttcaataggtcttggaagaacaaaggaaagcaaaggaa 39193845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 39587464 - 39587424
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  39587464 aatttcaataggtcttggaagaacaatggagagcaaaggaa 39587424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 47195773 - 47195733
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  47195773 aatttcaataggtcttggaagaacaatggagagcaaaggaa 47195733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 147971 - 148015
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  147971 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 148015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 154046 - 154090
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  154046 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 154090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 2327118 - 2327189
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  2327118 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 2327189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 5974214 - 5974170
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  5974214 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 5974170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 39587419 - 39587375
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  39587419 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 39587375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 47195728 - 47195684
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  47195728 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 47195684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 11194752 - 11194802
Alignment:
Q  8 aaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||| | ||||||||||||||||||||||||||   ||||||||||||    
T  11194752 aaagttattcaatttcaataggtcttggaagaacaatgaagagcaaaggaa 11194802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 17957755 - 17957706
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  || ||||||||||    
T  17957755 aagtcaatcaatttcaataggtcttggaagaacaatggaaagcaaaggaa 17957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 20441031 - 20441068
Alignment:
Q  21 ttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||||||||||  |||||||||||||    
T  20441031 ttcaataggtcttggaagaacaatggagagcaaaggaa 20441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 24252967 - 24252938
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  24252967 aagcatctgaagaaaactgcgtctgaagct 24252938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 26577068 - 26577024
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  26577068 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 26577024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 37642562 - 37642533
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||    
T  37642562 taaagcatctgaagaaaactgcgtctgaag 37642533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 39193851 - 39193895
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  39193851 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 39193895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 44201363 - 44201299
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaag 90  Q
    ||||||||||||||||||||||||||| ||| ||   ||||| ||||| |||||| ||||||||||||    
T  44201363 aataggtcttggaagaacaaaagagaggaaatga---atcaacaagagaaacctagaagcatctgaag 44201299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 4250339 - 4250384
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||| ||||||||  ||||||| |||||||||    
T  4250339 aagcatctgaagaaaactgcatctgaagc--tgaagtgcttctgaagt 4250384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 5930046 - 5929990
Alignment:
Q  51 caaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||| || ||||||||| |||||| ||||||||||||||| |||| |||||||    
T  5930046 caaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctgaag 5929990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 18381631 - 18381671
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||| ||||||||    
T  18381631 aatttcaataggtcttggaagaacaatggagaccaaaggaa 18381671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 2267425 - 2267347
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||| |||||| |||| || || ||| ||| | | | |||||||| ||||||||||||| |||||||    
T  2267425 aggtcttggaagaacaatagagagtaaagaaatcaacaaaaag-gaagcttaaagcatatgaagaaaactgcttctgaag 2267347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 17957701 - 17957657
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||| ||||||||||||||  ||||| ||||||||    
T  17957701 aagcatctgaagaaaattgcgtctgaagcta--aagtgcttctgaag 17957657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 102; Significance: 5e-51; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 1190 - 1085
Alignment:
Q  21 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1190 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttc 1091  T
Q  121 tgaagt 126  Q
    ||||||    
T  1090 tgaagt 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 5570 - 5465
Alignment:
Q  21 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5570 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttc 5471  T
Q  121 tgaagt 126  Q
    ||||||    
T  5470 tgaagt 5465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 1e-48; HSPs: 90)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 19289026 - 19289155
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaag-aaaactgcg 99  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  19289026 catagacaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatttgaagaaaaactgcg 19289125  T
Q  100 tctgaagctatgaagtgtttctgaagtttc 129  Q
     ||||||||||||||| |||||||||||||    
T  19289126 actgaagctatgaagtatttctgaagtttc 19289155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 17048078 - 17047966
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaag-aaaactgcgtctgaagctatgaagtg 116  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||  ||||| || ||||||||||||||| ||||||||||||||||||  ||||||    
T  17048078 aatttaaataggtcttggaagaacaaaagagagcaaagaaaccatcagaaagaggaatctaaagcatctgaagaaaaactgcgtctgaagcttagaagtg 17047979  T
Q  117 tttctgaagtttc 129  Q
     ||||||||||||    
T  17047978 cttctgaagtttc 17047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 21128605 - 21128522
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||||||| ||||||||    
T  21128605 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaaactgtgtctgaag 21128522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 11236048 - 11235938
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||                ||||||||||||||||||||| ||    
T  11236048 catagacaaagttaatcaatttcaataggtcttggaagaacaaaagagagaaaaggaacc----------------taaagcatctgaagaaaactgtgt 11235965  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||||||||||||||    
T  11235964 ctgaagctatgaagtgtttctgaagtt 11235938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 9933333 - 9933443
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||   ||| |            |||||||||||||||||||||||    
T  9933333 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagga---atcta------------aaagcatctgaagaaaactgcgt 9933417  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  9933418 ctgaagctatgaagtgcttctgaagt 9933443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 17608098 - 17608196
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||| ||| || ||| ||||| | |||||||||||||||||||||| ||||||||| | ||||||| | ||||||    
T  17608098 aggtcttggaagaacaaaagagagcaaatgaatcaacaaaaagagaagcctaaagcatctgaagaaaactacgtctgaagttttgaagtgctcctgaag 17608196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18499154 - 18499044
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  18499154 cataggcaaagttattcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 18499071  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||| ||||||||||    
T  18499070 ctgaagctatgaagtgcttctgaagtt 18499044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11206495 - 11206436
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaacc 60  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11206495 cataggcaaagttaatcaatttcaataggtcttggaagaacaaacgagagcaaaggaacc 11206436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 11525382 - 11525465
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| |||||| ||||||||||||||| |||| |||||||    
T  11525382 aataggtcttggaagaacaaaagagagcaaatgaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctgaag 11525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17741347 - 17741404
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  17741347 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaa 17741404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 18555745 - 18555692
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18555745 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgcttctgaagtttc 18555692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 31931973 - 31931871
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||                ||||||||||||||||||||||||    
T  31931973 catagacaaagttaatcaatttcaataggtcttggaagaacaataaagagcaaaggaacc----------------taaagcatctgaagaaaactgcgt 31931890  T
Q  101 ctgaagctatgaagtgttt 119  Q
    |||||||||||||||||||    
T  31931889 ctgaagctatgaagtgttt 31931871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 12952836 - 12952888
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12952836 taaagcatctgaagaaaactgcgtctgaagctatgaagtgcttctgaagtttc 12952888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 7585918 - 7585988
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaa 93  Q
    |||||||||||||||||||||||| |||||| ||| || ||||||||| |||||| |||||||||||||||    
T  7585918 aataggtcttggaagaacaaaagaaagcaaatgaatcaacaagaagagaaacctagaagcatctgaagaaa 7585988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 30401315 - 30401372
Alignment:
Q  71 gtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  30401315 gtaatctaaagcatctgaagaaaactgcgtctgaagctatg-agtgcttctgaagtttc 30401372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 11206439 - 11206383
Alignment:
Q  73 aacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| || |||||||||    
T  11206439 aacctaaagcacctgaagaaaactacgtctgaagctatgaagtgattatgaagtttc 11206383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 18825944 - 18825992
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  18825944 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 18825992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 29766024 - 29765976
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  29766024 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 29765976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12952775 - 12952833
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttgg-aagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||    
T  12952775 cataggcaaagttattcaatttcaataggtcttggaaagaacaatagagagcaaaggaa 12952833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18555804 - 18555747
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||| ||||  ||||||||||| |||||||||||||| ||||||||||||||    
T  18555804 cataggcaaaattaaacaatttcaatagatcttggaagaacaatagagagcaaaggaa 18555747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18825883 - 18825940
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||| |||||||| |||||||||||||||||   ||||||||||||    
T  18825883 cataggcaaagttaatcaatttcaaaaggtcttggaagaacaatgaagagcaaaggaa 18825940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25722601 - 25722654
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||||| | ||||||||||||||||||||||||||  |||||||||    
T  25722601 cataggcaaagttattcaatttcaataggtcttggaagaacaatggagagcaaa 25722654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25735201 - 25735254
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||||| | ||||||||||||||||||||||||||  |||||||||    
T  25735201 cataggcaaagttattcaatttcaataggtcttggaagaacaatggagagcaaa 25735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29766085 - 29766028
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| | | ||||||||||||||||||||||||||  |||||||||||||    
T  29766085 cataggcaaagtcattcaatttcaataggtcttggaagaacaatggagagcaaaggaa 29766028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 22309281 - 22309233
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||    
T  22309281 aaagcatctgaagaaaactgcgtctgaagctaagaagtacttctgaagt 22309233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 25519178 - 25519130
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| || ||||||    
T  25519178 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttatgaagt 25519130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 16264945 - 16265015
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    |||||||| |||||||| |||||||||||||| || ||| ||| | | ||||||||||||||||||||||||    
T  16264945 aggtcttgaaagaacaatagagagcaaaggaatcaacaaaaag-gaatcctaaagcatctgaagaaaactgc 16265015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 5845626 - 5845576
Alignment:
Q  8 aaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  5845626 aaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 5845576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18834296 - 18834338
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaa 43  Q
    |||||||||||||||| |||||||| |||||||||||||||||    
T  18834296 cataggcaaagttaatcaatttcaaaaggtcttggaagaacaa 18834338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 20636049 - 20635999
Alignment:
Q  75 cctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||| |||||||||||||| ||||||||| | ||||||    
T  20636049 cctaaagcatctgaagagaactgcgtctgaagttatgaagtgctcctgaag 20635999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 10547424 - 10547473
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  10547424 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 10547473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 13928695 - 13928646
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  13928695 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 13928646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 17741408 - 17741457
Alignment:
Q  78 aaagcatctgaagaaaa-ctgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  17741408 aaagcatctgaagaaaaactacgtctgaagctatgaagtgcttctgaagt 17741457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22309343 - 22309290
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  22309343 cataggcaaagtcattcaatttcaataggtcttggaagaacaatggagagcaaa 22309290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25519239 - 25519182
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||||||| | | ||||||||||||||||||||||||||  |||||||||||||    
T  25519239 catatgcaaagtcattcaatttcaataggtcttggaagaacaatggagagcaaaggaa 25519182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 25675654 - 25675621
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  25675654 ctaaagcatctgaagaaaactgcgtctgaagcta 25675621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25675714 - 25675673
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaaca 42  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  25675714 cataggcaaagttattcaatttcaataggtcttggaagaaca 25675673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 25679730 - 25679697
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  25679730 ctaaagcatctgaagaaaactgcgtctgaagcta 25679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25679790 - 25679749
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaaca 42  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  25679790 cataggcaaagttattcaatttcaataggtcttggaagaaca 25679749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 25686438 - 25686471
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  25686438 ctaaagcatctgaagaaaactgcgtctgaagcta 25686471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 25735261 - 25735294
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  25735261 ctaaagcatctgaagaaaactgcgtctgaagcta 25735294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 25800806 - 25800760
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  25800806 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaagt 25800760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 17043096 - 17043048
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||| ||||||||||||||||||||||| || |||||| |||||||||    
T  17043096 aaagcctctgaagaaaactgcgtctgaagttaggaagtgcttctgaagt 17043048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 17745439 - 17745471
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctat 110  Q
    |||||||||||||||||||||||||||||||||    
T  17745439 aaagcatctgaagaaaactgcgtctgaagctat 17745471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 18925424 - 18925464
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  18925424 aatttcaataggtcttggaagaacaatggagagcaaaggaa 18925464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 22387126 - 22387078
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||  ||||||||| | ||||||    
T  22387126 taaagcatctgaagaaaactgcgtctgaaattatgaagtgctcctgaag 22387078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 27166150 - 27166198
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||| |||||||||| |||||| || ||||||    
T  27166150 aaagcatctgaagaaaactgcatctgaagctaagaagtgcttatgaagt 27166198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30401261 - 30401313
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaa 53  Q
    |||||||||||||||| ||||||||| ||| |||| ||||||| |||||||||    
T  30401261 cataggcaaagttaatcaatttcaattggttttggtagaacaatagagagcaa 30401313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 5845571 - 5845527
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  5845571 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 5845527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 16123250 - 16123294
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||    
T  16123250 aagcatctgaagaaaattgcgtctgaagcta--aagtgtttctgaag 16123294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 17577504 - 17577548
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  17577504 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 17577548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 18925469 - 18925513
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  18925469 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 18925513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Complemental strand, 8654150 - 8654120
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  8654150 aagcatctgaagaaaactgcgtctgaagcta 8654120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 10402825 - 10402870
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  10402825 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 10402870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 10547478 - 10547508
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  10547478 aagcatctgaagaaaactgcgtctgaagcta 10547508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 12828165 - 12828120
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  12828165 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 12828120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Complemental strand, 13913502 - 13913472
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  13913502 aagcatctgaagaaaactgcgtctgaagcta 13913472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 25788173 - 25788128
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  25788173 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 25788128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Complemental strand, 25986569 - 25986539
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  25986569 aagcatctgaagaaaactgcgtctgaagcta 25986539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 32761639 - 32761684
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  32761639 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 32761684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 9366 - 9395
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  9366 aagcatctgaagaaaactgcgtctgaagct 9395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 107
Target Start/End: Complemental strand, 4293215 - 4293186
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagc 107  Q
    ||||||||||||||||||||||||||||||    
T  4293215 aaagcatctgaagaaaactgcgtctgaagc 4293186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 8654192 - 8654155
Alignment:
Q  21 ttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||||||||||  |||||||||||||    
T  8654192 ttcaataggtcttggaagaacaatggagagcaaaggaa 8654155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 12382396 - 12382367
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  12382396 aagcatctgaagaaaactgcgtctgaagct 12382367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 16122898 - 16122947
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  || ||||||||||    
T  16122898 aagtcaatcaatttcaataggtcttggaagaacaatggaaagcaaaggaa 16122947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 16122951 - 16122997
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||| ||||||||||||||  ||||| |||||||||    
T  16122951 aaagcatctgaagaaaattgcgtctgaagcta--aagtgcttctgaagt 16122997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 16123196 - 16123245
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  || ||||||||||    
T  16123196 aagtcaatcaatttcaataggtcttggaagaacaatggaaagcaaaggaa 16123245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 17745386 - 17745431
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||    
T  17745386 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaa 17745431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 20029629 - 20029673
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  20029629 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 20029673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 20062380 - 20062424
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  20062380 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 20062424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 25722661 - 25722694
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||| |||||||||||    
T  25722661 ctaaagcatctgaagaaaactgggtctgaagcta 25722694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27166089 - 27166146
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| | | ||||| ||||||||| ||||||||||  |||||||||||||    
T  27166089 cataggcaaagtcattcaatttaaataggtctgggaagaacaatggagagcaaaggaa 27166146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 30119972 - 30120016
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||    
T  30119972 agcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 30120016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 31572884 - 31572838
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||| |||||||||||  ||||| |||||||||    
T  31572884 aaagcatctgaagaaaactgtgtctgaagcta--aagtgcttctgaagt 31572838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 7375437 - 7375477
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  7375437 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 7375477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 7375483 - 7375511
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  7375483 agcatctgaagaaaactgcgtctgaagct 7375511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 11146911 - 11146947
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  11146911 aatttcaataggtcttggaagaacaatagaaagcaaa 11146947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 12382441 - 12382401
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  12382441 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 12382401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 12828210 - 12828170
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  12828210 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 12828170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 13928641 - 13928596
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||| ||||||||  ||||| |||||||||    
T  13928641 aagcatctgaagaaaactgcgtttgaagcta--aagtgcttctgaagt 13928596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 17064685 - 17064637
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||| ||| ||||||||||||||||||| || |||||| |||||||||    
T  17064685 aaagcctctaaagaaaactgcgtctgaagttaggaagtgcttctgaagt 17064637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 18378624 - 18378592
Alignment:
Q  26 taggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||| |||||||    
T  18378624 taggtcttggaagaacaaaagagagtaaaggaa 18378592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 25788218 - 25788178
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  25788218 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 25788178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 25800851 - 25800815
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  25800851 aatttcaataggtcttggaagaacaatggagagcaaa 25800815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 30119926 - 30119966
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  30119926 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 30119966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 15955058 - 15954987
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||| |||||| ||||||||    
T  15955058 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaaaaaaactgc 15954987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 17043151 - 17043100
Alignment:
Q  7 caaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||| | |||||| |||||||||||||||||||||   ||||||||||||    
T  17043151 caaagtcattaaattacaataggtcttggaagaacaatgaagagcaaaggaa 17043100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 17381801 - 17381730
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||| ||||| || ||| ||| | | | |||||| |||||||||||||||    
T  17381801 aggtcttggaagaacaataaagagcataggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 17381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 20062335 - 20062374
Alignment:
Q  19 atttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||||||||||||  || ||||||||||    
T  20062335 atttcaataggtcttggaagaacaatggaaagcaaaggaa 20062374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 58
Target Start/End: Complemental strand, 21235467 - 21235436
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||| ||||||||||||||    
T  21235467 aggtcttggaagaacaatagagagcaaaggaa 21235436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 1e-48; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 19297314 - 19297419
Alignment:
Q  21 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  19297314 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatctgaaggaaactgcgtctgaagctatgaagtgtttc 19297413  T
Q  121 tgaagt 126  Q
    ||||||    
T  19297414 tgaagt 19297419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 19312675 - 19312780
Alignment:
Q  21 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  19312675 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatctgaagaaaactgcgtcttaagctatgaagtgtttc 19312774  T
Q  121 tgaagt 126  Q
    ||||||    
T  19312775 tgaagt 19312780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20646233 - 20646337
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  20646233 cataggcaaagttgatcaatt-caataggtcttggaagaacaaaagagagcaaaggaaccatcaataagaggaacctaaagcatctgaagaaaactgcgt 20646331  T
Q  101 ctgaag 106  Q
    ||||||    
T  20646332 ctgaag 20646337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22755872 - 22755745
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||| |||||||||| || |||||||||||  |||||||||||||||||||||||| |||    
T  22755872 catagacaaagttgatcaattt-aataggtcttggaagaacaaacgagagcaaagaaatcatcaagaagaagaacctaaagcatctgaagaaaactacgt 22755774  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||| | ||||||| ||||||||||||    
T  22755773 ctgaagttttgaagtgcttctgaagtttc 22755745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 17968860 - 17968972
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || |||||||||||||||||||||||||    
T  17968860 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaactgcgt 17968943  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  17968944 ctgaagctatgaagtgcttctgaagtttc 17968972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24814270 - 24814374
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || || || ||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||| |||| |    
T  24814270 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaagcatctgaagaaatctgctt 24814368  T
Q  101 ctgaag 106  Q
    ||||||    
T  24814369 ctgaag 24814374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 1084426 - 1084347
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||||||||||||||||||||||||| || ||||||||| | |||||||||||||||||||| ||| |||||||    
T  1084426 aggtcttggaagaacaaaagagagcaaaggaatcagcaagaagagaagcctaaagcatctgaagaaaattgcctctgaag 1084347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 24275600 - 24275488
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || |||||||||||||||||||| ||||    
T  24275600 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaacagcgt 24275517  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  24275516 ctgaagctatgaagtgcttctgaagtttc 24275488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 24793718 - 24793799
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||| |||| |||||||    
T  24793718 aataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaagcatctgaagaaatctgcctctgaag 24793799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 19497660 - 19497769
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || |||||||||||||||||||||||||    
T  19497660 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaactgcgt 19497743  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| || ||||||    
T  19497744 ctgaagctatgaagtgcttttgaagt 19497769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 19356880 - 19356770
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||                ||||||||| || |||||||||||||||    
T  19356880 catagacaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aacctaaagtatatgaagaaaactgcgt 19356797  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    ||||||||||||||||||| |||||||    
T  19356796 ctgaagctatgaagtgtttttgaagtt 19356770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6081734 - 6081677
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  6081734 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 6081677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22764232 - 22764179
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  22764232 cataggcaaagttattcaatttcaataggtcttggaagaacaatagagagcaaa 22764179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 6081673 - 6081625
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  6081673 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 6081625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 36784535 - 36784583
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  36784535 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 36784583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 967215 - 967266
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtt 127  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  967215 ctaaaacatctaaagaaaactgcgtctgaagctatgaagtgcttctgaagtt 967266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 21025199 - 21025274
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgc 98  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||  |||||| |||||| |||||||| ||||    
T  21025199 aataggtcttggaacaacaaaagagagcaaaggaatcaacaagaagataaacctagaagcatatgaagaaatctgc 21025274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 967156 - 967213
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||| ||||||| |||||||||||||||||||||||||  ||| ||||||||||    
T  967156 cataggcatagttaatcaatttcaataggtcttggaagaacagtagaaagcaaaggaa 967213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23392384 - 23392473
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaag 90  Q
    ||||| ||||||| || ||| | ||||||||||||||||||||||||||||||| ||| || ||| | ||| | |||||| |||||||||    
T  23392384 catagacaaagttgatcaatcttaataggtcttggaagaacaaaagagagcaaaagaatcaacaaaaggagaagcctaaatcatctgaag 23392473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36784474 - 36784531
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| | | ||||||||||||||||||||||||||  |||||||||||||    
T  36784474 cataggcaaagtcattcaatttcaataggtcttggaagaacaatggagagcaaaggaa 36784531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 20417323 - 20417372
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  20417323 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 20417372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22774936 - 22774883
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||| ||||||| | ||||| |||||||||||||||||||| ||||||||||    
T  22774936 cataggtaaagttattcaatttaaataggtcttggaagaacaatagagagcaaa 22774883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22780314 - 22780261
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||| ||||||| | ||||| |||||||||||||||||||| ||||||||||    
T  22780314 cataggtaaagttattcaatttaaataggtcttggaagaacaatagagagcaaa 22780261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 27978062 - 27978111
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  27978062 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 27978111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 28064591 - 28064640
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  28064591 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 28064640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 38585765 - 38585814
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  38585765 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 38585814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 24414710 - 24414750
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  24414710 aatttcaataggtcttggaagaacaatggagagcaaaggaa 24414750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 24425222 - 24425262
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  24425222 aatttcaataggtcttggaagaacaatggagagcaaaggaa 24425262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 26867630 - 26867590
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  26867630 aatttcaataggtcttggaagaacaacggagagcaaaggaa 26867590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 26880219 - 26880179
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  26880219 aatttcaataggtcttggaagaacaatggagagcaaaggaa 26880179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 24414755 - 24414799
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  24414755 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 24414799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 24425267 - 24425311
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  24425267 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 24425311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 26867585 - 26867541
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  26867585 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 26867541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 28700947 - 28701018
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  28700947 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 28701018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 18768638 - 18768683
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  18768638 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 18768683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 20417377 - 20417407
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  20417377 aagcatctgaagaaaactgcgtctgaagcta 20417407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 21172181 - 21172226
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  21172181 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 21172226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Complemental strand, 26880174 - 26880144
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  26880174 aagcatctgaagaaaactgcgtctgaagcta 26880144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 28374229 - 28374259
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  28374229 aagcatctgaagaaaactgcgtctgaagcta 28374259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 28379568 - 28379598
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  28379568 aagcatctgaagaaaactgcgtctgaagcta 28379598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 28721048 - 28721093
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  28721048 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 28721093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 28731636 - 28731681
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  28731636 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 28731681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 22774876 - 22774843
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||| |||||||||||||    
T  22774876 ctaaagcatctgaagaaaacagcgtctgaagcta 22774843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 22780254 - 22780221
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||| |||||||||||||    
T  22780254 ctaaagcatctgaagaaaacagcgtctgaagcta 22780221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 28374184 - 28374225
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaac 59  Q
    ||||||||||||||||||||||||||   |||||||||||||    
T  28374184 aatttcaataggtcttggaagaacaatgaagagcaaaggaac 28374225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 28379523 - 28379564
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaac 59  Q
    ||||||||||||||||||||||||||   |||||||||||||    
T  28379523 aatttcaataggtcttggaagaacaatgaagagcaaaggaac 28379564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 18768593 - 18768633
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  18768593 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 18768633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 30795299 - 30795259
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  30795299 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 30795259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 38585819 - 38585864
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| ||||||||||||||  ||||| |||||||||    
T  38585819 aagcatctgaagaaaattgcgtctgaagcta--aagtgcttctgaagt 38585864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 94; Significance: 3e-46; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9596 - 9701
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  9596 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcaaaggacccatcaagaagaggaacctaaagcatctgaagaaaactgcgt 9695  T
Q  101 ctgaag 106  Q
    ||||||    
T  9696 ctgaag 9701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 1e-45; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 19461554 - 19461446
Alignment:
Q  21 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||    
T  19461554 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatctgaagaaaactgcgtctgaagttttgaagtgcttc 19461455  T
Q  121 tgaagtttc 129  Q
    |||||||||    
T  19461454 tgaagtttc 19461446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 19559232 - 19559124
Alignment:
Q  21 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||    
T  19559232 ttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagaggaacctaaagcatctgaagaaaactgcgtctgaagttttgaagtgcttc 19559133  T
Q  121 tgaagtttc 129  Q
    |||||||||    
T  19559132 tgaagtttc 19559124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 28903870 - 28903746
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || || || ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  28903870 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaagaaaactgcgt 28903771  T
Q  101 ctgaagctatgaagtgtttctgaag 125  Q
    |||||| ||||||||| | ||||||    
T  28903770 ctgaagttatgaagtgctcctgaag 28903746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40003596 - 40003491
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || || || ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||| |    
T  40003596 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaagaaatctgcct 40003497  T
Q  101 ctgaag 106  Q
    ||||||    
T  40003496 ctgaag 40003491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 20259303 - 20259412
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || |||||||||||||||||||||||||    
T  20259303 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaactgcgt 20259386  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  20259387 ctgaagctatgaagtgcttctgaagt 20259412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21045933 - 21046042
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || |||||||||||||||||||||||||    
T  21045933 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaactgcgt 21046016  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  21046017 ctgaagctatgaagtgcttctgaagt 21046042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 21541351 - 21541272
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| | ||||||||||||||||||| |||| |||||||    
T  21541351 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaagaaatctgcctctgaag 21541272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 22211073 - 22211185
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| |||||||| | |||||||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  22211073 catagacaaagttattcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 22211156  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  22211157 ctgaagctatgaagtgcttctgaagtttc 22211185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 23371159 - 23371039
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||  ||||||| |                |||||||||||||||||||| |||    
T  23371159 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagaaaaaaggaatc----------------taaagcatctgaagaaaactacgt 23371076  T
Q  101 ctgaagctatgaagtgtttctgaagtttctaatgcct 137  Q
    |||||||||||||||| |||||||||||| |||||||    
T  23371075 ctgaagctatgaagtgcttctgaagtttcaaatgcct 23371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23380918 - 23380806
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |                ||||||||| ||||||||||||||    
T  23380918 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagaacaaaggaatc----------------taaagcatcagaagaaaactgcgt 23380835  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  23380834 ctgaagctatgaagtgcttctgaagtttc 23380806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8032418 - 8032313
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| || |  |||||| |||||| ||||||||||||||| ||||     
T  8032418 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatctgcc 8032320  T
Q  100 tctgaag 106  Q
    |||||||    
T  8032319 tctgaag 8032313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18534814 - 18534919
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| || |  |||||| |||||| ||||||||||||||| ||||     
T  18534814 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaatctgcc 18534912  T
Q  100 tctgaag 106  Q
    |||||||    
T  18534913 tctgaag 18534919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3833337 - 3833227
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||| ||||||  |||||||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  3833337 cataggcatagttaagcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 3833254  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||| ||||||||||    
T  3833253 ctgaagctatgaagtgcttctgaagtt 3833227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3844117 - 3844008
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||| ||||||  |||||||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  3844117 cataggcatagttaagcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 3844034  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  3844033 ctgaagctatgaagtgcttctgaagt 3844008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 7018085 - 7018194
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||| |                ||||||||||||||||||||||||    
T  7018085 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagaaagcaaaagaatc----------------taaagcatctgaagaaaactgcgt 7018168  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||| ||||||||||    
T  7018169 ctgaagctatgaagtttttctgaagt 7018194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 17518831 - 17518901
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacct-aaagcatctgaagaaa 93  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||| | ||||||||||||||||    
T  17518831 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacttaaaagcatctgaagaaa 17518901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29379978 - 29379881
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgc 98  Q
    ||||| ||||||| || ||||| || |||||||||||||||||||||||| ||||||| || ||||||||| |||||| ||||||||||||||| ||||    
T  29379978 catagacaaagttgatcaattt-aacaggtcttggaagaacaaaagagagtaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgc 29379881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 23270921 - 23271004
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaag 106  Q
    |||| |||||||||||||| | ||||||||||||| || ||||||||| |||||| ||||||||||||||| |||| |||||||    
T  23270921 aataagtcttggaagaacataggagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctgaag 23271004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22135543 - 22135600
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||| |||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  22135543 cataggcgaagttaatcattttcaataggtcttggaagaacaatagagagcaaaggaa 22135600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 22135603 - 22135656
Alignment:
Q  77 taaagcatctgaa-gaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22135603 taaagcatctgaatgaaaactgcgtctgaagctatgaagtgcttctgaagtttc 22135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22166692 - 22166749
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||| |||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  22166692 cataggcgaagttaatcattttcaataggtcttggaagaacaatagagagcaaaggaa 22166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 22166752 - 22166805
Alignment:
Q  77 taaagcatctgaa-gaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22166752 taaagcatctgaatgaaaactgcgtctgaagctatgaagtgcttctgaagtttc 22166805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3844408 - 3844351
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||| |||||   |||||||||||||||||||||||||| ||||||||||||||    
T  3844408 cataggcatagttaggcaatttcaataggtcttggaagaacaatagagagcaaaggaa 3844351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 23783866 - 23783817
Alignment:
Q  77 taaagcatctgaa-gaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  23783866 taaagcatctgaatgaaaactgcgtctgaagctatgaagtgtttatgaag 23783817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 22623113 - 22623161
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||    
T  22623113 aaagcatctgaagaaaactgcgtctgaagccaagaagtgcttctgaagt 22623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 1238031 - 1237960
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | ||||||||||||||||||||||    
T  1238031 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcatctgaagaaaactgc 1237960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 3844349 - 3844299
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||| |||||||||||||||| ||||| |||||||||||| |||||||||    
T  3844349 ctaaaacatctgaagaaaactgagtctggagctatgaagtgcttctgaagt 3844299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 18158790 - 18158744
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  18158790 taaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 18158744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 18768813 - 18768862
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  18768813 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 18768862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 18768866 - 18768912
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  18768866 taaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 18768912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 23269586 - 23269635
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||    
T  23269586 aagtcaataaatttcaataggtcttggaagaacaatgaagagcaaaggaa 23269635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 40212852 - 40212901
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| |||||||||||||||||||||||||| ||| ||||||||||    
T  40212852 aagtcaatcaatttcaataggtcttggaagaacaatagaaagcaaaggaa 40212901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 16747595 - 16747555
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  16747595 aatttcaataggtcttggaagaacaatggagagcaaaggaa 16747555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 23457005 - 23457045
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  23457005 aatttcaataggtcttggaagaacaatggagagcaaaggaa 23457045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 23469161 - 23469201
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  23469161 aatttcaataggtcttggaagaacaatggagagcaaaggaa 23469201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 26734717 - 26734757
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  26734717 aatttcaataggtcttggaagaacaatggagagcaaaggaa 26734757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 16747550 - 16747506
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  16747550 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 16747506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 18158833 - 18158794
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaagga 57  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  18158833 aatttcaataggtcttggaagaacaatggagagcaaagga 18158794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 19927408 - 19927337
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | ||||||||||||||| ||| ||| | | | |||||| ||| |||||||||||    
T  19927408 aggtcttggaagaacaataaagagcaaaggaaccaacaaaaagggaagcttaaagcgtctaaagaaaactgc 19927337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 20160977 - 20161021
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  20160977 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 20161021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 20196490 - 20196446
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  20196490 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 20196446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 23269640 - 23269684
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  23269640 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 23269684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 26734762 - 26734806
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  26734762 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 26734806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 30314444 - 30314488
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  30314444 aagcatctgaagaaaactgcgtctgaagc--tgaagtgcttctgaag 30314488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 19225467 - 19225422
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||    
T  19225467 aagcatctgaagaaaactgcgtctgaagct-tatagtgtttctgaag 19225422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23783927 - 23783869
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtctt-ggaagaacaaaagagagcaaaggaa 58  Q
    ||||| |||||||| | |||||||||||||||| | |||||||| ||||||||||||||    
T  23783927 catagacaaagttattcaatttcaataggtcttcgaaagaacaatagagagcaaaggaa 23783869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 1745466 - 1745437
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||    
T  1745466 taaagcatctgaagaaaactgcgtctgaag 1745437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 18154266 - 18154224
Alignment:
Q  82 catctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||    
T  18154266 catctgaagaaaactgcgtctgaagcta--aagtgcttctgaagt 18154224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22623052 - 22623105
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||| ||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  22623052 catatgcaaagtcattcaatttcaataggtcttggaagaacaatggagagcaaa 22623105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 28691415 - 28691386
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  28691415 aagcatctgaagaaaactgcgtctgaagct 28691386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 30325058 - 30325087
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  30325058 aagcatctgaagaaaactgcgtctgaagct 30325087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 31215565 - 31215536
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  31215565 aagcatctgaagaaaactgcgtctgaagct 31215536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 18154313 - 18154273
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||| |||||||||||||||||  |||||||||||||    
T  18154313 aatttcaaaaggtcttggaagaacaatggagagcaaaggaa 18154273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 19418884 - 19418856
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  19418884 agcatctgaagaaaactgcgtctgaagct 19418856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 19429461 - 19429433
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  19429461 agcatctgaagaaaactgcgtctgaagct 19429433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 15335830 - 15335901
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||  |||||||||||||||    
T  15335830 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagtgtctgaagaaaactgc 15335901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 15424895 - 15424966
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||  |||||||||||||||    
T  15424895 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagtgtctgaagaaaactgc 15424966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 15516199 - 15516270
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||  |||||||||||||||    
T  15516199 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagtgtctgaagaaaactgc 15516270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 24832843 - 24832914
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | ||||||||| || || ||| ||| | | | |||||| |||||||||||||||    
T  24832843 aggtcttggaagaacaataaagagcaaagaaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 24832914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 58
Target Start/End: Original strand, 30421231 - 30421262
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||| ||||||||||||||    
T  30421231 aggtcttggaagaacaatagagagcaaaggaa 30421262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 40212906 - 40212950
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||| ||||||||||||||  ||||| ||||||||    
T  40212906 aagcatctgaagaaaattgcgtctgaagcta--aagtgcttctgaag 40212950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 45538243 - 45538314
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | ||||||||| || || ||| ||| | | | |||||| |||||||||||||||    
T  45538243 aggtcttggaagaacaataaagagcaaagaaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 45538314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 85; Significance: 7e-41; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 17501 - 17628
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  17501 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaagaaaactgcgt 17599  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||| | ||||||| ||||||||||||    
T  17600 ctgaagttttgaagtgcttctgaagtttc 17628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 85; Significance: 7e-41; HSPs: 4)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 40008 - 40135
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  40008 cataggcaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaggaacctaaagcatctgaagaaaactgcgt 40106  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||| | | ||||| ||||||||||||    
T  40107 ctgaagttttaaagtgcttctgaagtttc 40135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 180759 - 180711
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||    
T  180759 aaagcatctgaagaaaactgcgtctgaagccaagaagtgcttctgaagt 180711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 175908 - 175855
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||| ||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  175908 catatgcaaagtcattcaatttcaataggtcttggaagaacaatggagagcaaa 175855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 175847 - 175799
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||| |||||||| | |||||| |||| ||||    
T  175847 aaagcatctgaagaaaactgcatctgaagccaagaagtgcttctaaagt 175799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 7e-41; HSPs: 108)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 7e-41
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 27173422 - 27173295
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||||||| || |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| || ||||| |||||||||||||||||||    
T  27173422 cataggcaaagtttattaatt-caataggtcttggaagaacaaaagagagcaaagaaaccatcaaaaagaggaatctaaaacatctgaagaaaactgcgt 27173324  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||| |||||| ||||||||||||    
T  27173323 ctgaagctaagaagtgcttctgaagtttc 27173295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 31113609 - 31113737
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaac-catcaagaagagtaacctaaagcatctgaagaaaactgcg 99  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||| ||||||  ||  |||||||||||| |||||||||||||||||||||||||||    
T  31113609 cataggcaaagttgatcaattt-aataggtcttggaagaacaaaagaaagcaaaaaaaatcatcaagaagaggaacctaaagcatctgaagaaaactgcg 31113707  T
Q  100 tctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||| | ||||||| ||||||||||||    
T  31113708 tctgaagttttgaagtgcttctgaagtttc 31113737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 13148651 - 13148569
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||| |||||||    
T  13148651 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaagaaatctgcctctgaag 13148569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21736710 - 21736600
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||                ||||||||||||||||||||||||    
T  21736710 cataggcaaagttaatcaatttcaataggtcttggaagaacaataaagagcaaaggaacc----------------taaagcatctgaagaaaactgcgt 21736627  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||||||||||||||    
T  21736626 ctgaagctatgaagtgtttctgaagtt 21736600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23680050 - 23680163
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||   ||| |            |||||||||||||||||||||||    
T  23680050 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagga---atcta------------aaagcatctgaagaaaactgcgt 23680134  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  23680135 ctgaagctatgaagtgcttctgaagtttc 23680163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 24052287 - 24052400
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||   ||| |            |||||||||||||||||||||||    
T  24052287 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagga---atcta------------aaagcatctgaagaaaactgcgt 24052371  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  24052372 ctgaagctatgaagtgcttctgaagtttc 24052400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 10529727 - 10529604
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||  | || ||||||||| | |||||| |||||||||||||||||||    
T  10529727 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaagatatcaacaagaagagaagcctaaaacatctgaagaaaactgcgt 10529629  T
Q  101 ctgaagctatgaagtgtttctgaag 125  Q
     ||||| |||| |||| | ||||||    
T  10529628 gtgaagttatggagtgctcctgaag 10529604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 17022426 - 17022336
Alignment:
Q  8 aaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgc 98  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||| ||||    
T  17022426 aaagttaatcaattt-aataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctagaagcatctgaagaaatctgc 17022336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2246967 - 2246858
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || |||||||||||||||||||||||||    
T  2246967 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaactgcgt 2246884  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||| ||||    
T  2246883 ctgaagctatgaagtggttcttaagt 2246858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 11908755 - 11908834
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| | ||||||||||||||||||| |||| |||||||    
T  11908755 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaagaaatctgcctctgaag 11908834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13198876 - 13198933
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  13198876 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaa 13198933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 12752391 - 12752470
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||||||||||||||||||||| ||| || ||| ||||| | ||||||||||||||||||| |||| |||||||    
T  12752391 aggtcttggaagaacaaaagagagcaaaagaatcaacaaaaagagaagcctaaagcatctgaagaaatctgcctctgaag 12752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22151654 - 22151563
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaa 92  Q
    ||||| ||||||| || || || ||||||||||| || |||||||||||||||||||| || ||| ||||| ||||||||||||||||||||    
T  22151654 catagacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacctaaagcatctgaagaa 22151563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41046118 - 41046021
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgc 98  Q
    ||||| ||||||| || ||||| |||||||||||||| |||||||||||||||||||| || |  |||||| |||||| ||||||||||||||| ||||    
T  41046118 catagacaaagttgatcaattt-aataggtcttggaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctataagcatctgaagaaatctgc 41046021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15650722 - 15650779
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||    
T  15650722 cataggcaaagttattcaatttcaataggtcttagaagaacaatagagagcaaaggaa 15650779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15662357 - 15662414
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||| | ||||||||||||||||||||||||||  |||||||||||||    
T  15662357 cataggcaaagttattcaatttcaataggtcttggaagaacaatggagagcaaaggaa 15662414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17281066 - 17281123
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  17281066 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 17281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 1064678 - 1064630
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1064678 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 1064630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 16077469 - 16077421
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  16077469 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 16077421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 16670857 - 16670905
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  16670857 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 16670905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 17281127 - 17281175
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  17281127 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 17281175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 15662418 - 15662469
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  15662418 aaagcatctgaagaaaactgtgtctgaagctataaagtgcttctgaagtttc 15662469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 51988794 - 51988867
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagta---accta-aagcatctgaagaaa 93  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |   ||||| |||||||||||||||    
T  51988794 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaagaaacctagaagcatctgaagaaa 51988867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 13978043 - 13977993
Alignment:
Q  75 cctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  13978043 cctaaagcatctgaagaaaactgcgtctgaagttatgaagtgctcctgaag 13977993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 15833714 - 15833664
Alignment:
Q  75 cctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  15833714 cctaaagcatctgaagaaaactgcgtctgaagttatgaagtgctcctgaag 15833664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 15851260 - 15851210
Alignment:
Q  75 cctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  15851260 cctaaagcatctgaagaaaactgcgtctgaagttatgaagtgctcctgaag 15851210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16665760 - 16665802
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaa 43  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  16665760 cataggcaaagttaatcaatttcaataggtcttggaagaacaa 16665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8739761 - 8739818
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| | | ||||||||||||| |||||||||||| ||||||||||||||    
T  8739761 cataggcaaagtcattcaatttcaataggttttggaagaacaatagagagcaaaggaa 8739818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9091999 - 9092056
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| | | ||||||||||||| |||||||||||| ||||||||||||||    
T  9091999 cataggcaaagtcattcaatttcaataggttttggaagaacaatagagagcaaaggaa 9092056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14581731 - 14581674
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||||||| | | |||||||||||||||||||||||||| ||||||||||||||    
T  14581731 catatgcaaagtcattcaatttcaataggtcttggaagaacaatagagagcaaaggaa 14581674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16077530 - 16077473
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| |||  |||||||||||||||||||||||||  |||||||||||||    
T  16077530 cataggcaaagtcaatctatttcaataggtcttggaagaacaatggagagcaaaggaa 16077473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16670796 - 16670853
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||| ||||||||| ||||||||||||||||||||||||||   ||||||||||||    
T  16670796 cataggaaaagttaatcaatttcaataggtcttggaagaacaatgaagagcaaaggaa 16670853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29905821 - 29905874
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||| | ||| |||||||||||||||||||||||||| ||||||||||    
T  29905821 cataggcaaaatcaatcaatttcaataggtcttggaagaacaatagagagcaaa 29905874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29933216 - 29933269
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||    
T  29933216 cataggcaaagtcaatcaatttcaataggtcttggaagagcaatagagagcaaa 29933269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29946986 - 29947039
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||| | ||| |||||||||||||||||||||||||| ||||||||||    
T  29946986 cataggcaaaatcaatcaatttcaataggtcttggaagaacaatagagagcaaa 29947039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29982370 - 29982423
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||    
T  29982370 cataggcaaagtcaatcaatttcaataggtcttggaagagcaatagagagcaaa 29982423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29996140 - 29996193
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||| | ||| |||||||||||||||||||||||||| ||||||||||    
T  29996140 cataggcaaaatcaatcaatttcaataggtcttggaagaacaatagagagcaaa 29996193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 4457436 - 4457391
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  4457436 aagcatctgaagaaaactgcgtctgaagcta--aagtgtttctgaagt 4457391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 8739822 - 8739870
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||||    
T  8739822 aaagcatctgaagaaaactgcgtctgaagctcagaagtgcttctgaagt 8739870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 8758193 - 8758241
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||    
T  8758193 aaagcatctgaagaaaactgcgtctgaagctaagaagttcttctgaagt 8758241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 9092060 - 9092108
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||||    
T  9092060 aaagcatctgaagaaaactgcgtctgaagctcagaagtgcttctgaagt 9092108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 14581670 - 14581622
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  14581670 aaagcttctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 14581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 16665825 - 16665869
Alignment:
Q  82 catctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||| |||||| |||||||||    
T  16665825 catctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 16665869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 15650783 - 15650834
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||| | ||||||||||||| ||||| ||||||||||||    
T  15650783 aaagcatctgaagaaaagtacgtctgaagctataaagtgcttctgaagtttc 15650834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 51341419 - 51341348
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    |||||||||||||||||||||||||||| |||  | ||| ||||| | ||||||||||||||| ||| ||||    
T  51341419 aggtcttggaagaacaaaagagagcaaaagaattaacaaaaagagaagcctaaagcatctgaaaaaatctgc 51341348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1054292 - 1054236
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| | ||||||||||||||||||||||||  |||||||||||||    
T  1054292 cataggcaaagtcaatca-tttcaataggtcttggaagaacaatggagagcaaaggaa 1054236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1064738 - 1064682
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| | ||||||||||||||||||||||||  |||||||||||||    
T  1064738 cataggcaaagtcaatca-tttcaataggtcttggaagaacaatggagagcaaaggaa 1064682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8758133 - 8758189
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| | ||||||||||||||||||||||||  |||||||||||||    
T  8758133 cataggcaaagtcaatca-tttcaataggtcttggaagaacaatggagagcaaaggaa 8758189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 14254055 - 14254104
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  14254055 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 14254104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 14321341 - 14321390
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  14321341 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 14321390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15226633 - 15226690
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||||||| ||| ||||| ||||||||||||||||||||  |||||||||||||    
T  15226633 cataagcaaagtcaatcaatttaaataggtcttggaagaacaatggagagcaaaggaa 15226690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 27883903 - 27883857
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  27883903 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaagt 27883857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 27883956 - 27883907
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  27883956 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 27883907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 29905881 - 29905914
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  29905881 ctaaagcatctgaagaaaactgcgtctgaagcta 29905914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 29933276 - 29933309
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  29933276 ctaaagcatctgaagaaaactgcgtctgaagcta 29933309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 29947046 - 29947079
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  29947046 ctaaagcatctgaagaaaactgcgtctgaagcta 29947079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 29982430 - 29982463
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  29982430 ctaaagcatctgaagaaaactgcgtctgaagcta 29982463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 29996200 - 29996233
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  29996200 ctaaagcatctgaagaaaactgcgtctgaagcta 29996233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 1054232 - 1054184
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||| |||||||||||  ||||| |||||||||    
T  1054232 aaagcatctgaagaaaactgtgtctgaagctaataagtgcttctgaagt 1054184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 4404793 - 4404748
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||||    
T  4404793 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaagt 4404748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 4404838 - 4404798
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  4404838 aatttcaataggtcttggaagaacaatggagagcaaaggaa 4404798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 4457481 - 4457441
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  4457481 aatttcaataggtcttggaagaacaatggagagcaaaggaa 4457441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 11168040 - 11168000
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  11168040 aatttcaataggtcttggaagaacaatggagagcaaaggaa 11168000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 11216390 - 11216430
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  11216390 aatttcaataggtcttggaagaacaatggagagcaaaggaa 11216430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 15226694 - 15226739
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  15226694 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 15226739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 18851360 - 18851400
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  18851360 aatttcaataggtcttggaagaacaatggagagcaaaggaa 18851400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 38315273 - 38315233
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  38315273 aatttcaataggtcttggaagaacaatggagagcaaaggaa 38315233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 7608039 - 7608083
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  7608039 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 7608083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 11216435 - 11216479
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  11216435 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 11216479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 17961936 - 17961885
Alignment:
Q  7 caaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||| | ||||||||||||||||||||||||||   ||||||||||||    
T  17961936 caaagttatttaatttcaataggtcttggaagaacaatgaagagcaaaggaa 17961885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 20627269 - 20627347
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||| |||||||||||||| || ||| ||| | | | |||||| |||||| |||||||| |||||||    
T  20627269 aggtcttggaagaacaatagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaacaaaactgcttctgaag 20627347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 28169594 - 28169555
Alignment:
Q  70 agtaacctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  28169594 agtaatctgaagcatctgaagaaaactgcgtctgaagcta 28169555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 29460927 - 29460971
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  29460927 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 29460971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 29471779 - 29471823
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  29471779 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 29471823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 934149 - 934104
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  934149 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 934104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 9390933 - 9390963
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  9390933 aagcatctgaagaaaactgcgtctgaagcta 9390963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 18006840 - 18006790
Alignment:
Q  7 caaagttaataaatttcaataggtcttggaagaacaaaagagagcaaagga 57  Q
    |||||||| | ||||||||||||||||||||||||||   |||||||||||    
T  18006840 caaagttatttaatttcaataggtcttggaagaacaatgaagagcaaagga 18006790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 19887067 - 19887112
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  19887067 aagcatctgaagaaaactgcgtctgaagct-taaagtgattctgaag 19887112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 23636232 - 23636187
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  23636232 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 23636187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 24706268 - 24706313
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  24706268 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 24706313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 28169639 - 28169593
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    |||| ||| ||||||||||||||||||||||||||  ||||||||||    
T  28169639 aagtcaatcaatttcaataggtcttggaagaacaatggagagcaaag 28169593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 1783784 - 1783813
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  1783784 aagcatctgaagaaaactgcgtctgaagct 1783813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 1794196 - 1794225
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  1794196 aagcatctgaagaaaactgcgtctgaagct 1794225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8995589 - 8995642
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||| ||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  8995589 catatgcaaagtcactcaatttcaataggtcttggaagaacaatggagagcaaa 8995642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9006141 - 9006194
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||| ||||||| | | ||||||||||||||||||||||||||  |||||||||    
T  9006141 catatgcaaagtcactcaatttcaataggtcttggaagaacaatggagagcaaa 9006194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 9536112 - 9536068
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  9536112 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 9536068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 13604766 - 13604737
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  13604766 aagcatctgaagaaaactgcgtctgaagct 13604737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15216010 - 15216067
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||| ||||| ||| ||||| ||||||| ||||||||||||  |||||||||||||    
T  15216010 catagggaaagtcaatcaatttaaataggtattggaagaacaatggagagcaaaggaa 15216067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 41495337 - 41495265
Alignment:
Q  33 tggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||||||||||||||||||| || ||| ||| | | | ||||||||||||||| || ||| |||||||    
T  41495337 tggaagaacaaaagagagcaaaggaatcaacaaaaag-gaagcttaaagcatctgaagagaagtgcttctgaag 41495265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 46349617 - 46349686
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaact 96  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||||| |||||||||||    
T  46349617 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcatatgaagaaaact 46349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 47405243 - 47405311
Alignment:
Q  29 gtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||| |||||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  47405243 gtcttggaagaacaatagagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaagaaaactgc 47405311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 48337762 - 48337718
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  48337762 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 48337718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 1783739 - 1783775
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  1783739 aatttcaataggtcttggaagaacaatggagagcaaa 1783775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 1794151 - 1794187
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  1794151 aatttcaataggtcttggaagaacaatggagagcaaa 1794187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 7794258 - 7794298
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  7794258 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 7794298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 7804214 - 7804254
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  7804214 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 7804254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 7804260 - 7804288
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  7804260 agcatctgaagaaaactgcgtctgaagct 7804288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 8995651 - 8995679
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagc 107  Q
    |||||||||||||||||||||||||||||    
T  8995651 aagcatctgaagaaaactgcgtctgaagc 8995679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 9380325 - 9380361
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  9380325 aatttcaataggtcttggaagaacaatggagagcaaa 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 9390888 - 9390924
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  9390888 aatttcaataggtcttggaagaacaatggagagcaaa 9390924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 14254109 - 14254154
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||| ||||||||  ||||| |||||||||    
T  14254109 aagcatctgaagaaaactgcgtttgaagcta--aagtgcttctgaagt 14254154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 17909670 - 17909710
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||| ||||||||||||||||||||| || ||||||||||    
T  17909670 aatttgaataggtcttggaagaacaaaggaaagcaaaggaa 17909710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 19887022 - 19887058
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  19887022 aatttcaataggtcttggaagaacaatggagagcaaa 19887058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 48337808 - 48337768
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  48337808 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 48337768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 9006203 - 9006250
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||| || | | |||||| |||||||||    
T  9006203 aagcatctgaagaaaactgcgtctaaaaccaagaagtgcttctgaagt 9006250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 109
Target Start/End: Original strand, 15216071 - 15216102
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||| |||||||||||||    
T  15216071 aaagcatctgaagaaaaccgcgtctgaagcta 15216102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 29855796 - 29855725
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | ||| |||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  29855796 aggtcttggaagaacaataaagaacaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 29855725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 49990641 - 49990570
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| ||||||||||  |  || ||| ||||| | |||||||||||| |||||| ||||    
T  49990641 aggtcttggaagaacaatagagagcaaaaaattcaacaaaaagagaagcctaaagcatctaaagaaatctgc 49990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9712 - 9585
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||    
T  9712 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaagaaaactgtgt 9614  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||| | ||||||| ||||||||||||    
T  9613 ctgaagttttgaagtgcttctgaagtttc 9585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 72; Significance: 4e-33; HSPs: 6)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 7311 - 7440
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||||| || |||||||||||  |||||||||||| |||||||||||||||    
T  7311 cataggcaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaagaaatcatcaagaagaagaacctaaagcatttgaagaaaactgcgt 7409  T
Q  101 ctgaag--ctatgaagtgtttctgaagtttc 129  Q
    ||||||   | ||||||| ||||||||||||    
T  7410 ctgaagtcttttgaagtgcttctgaagtttc 7440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 128210 - 128156
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    ||||| |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  128210 catagtcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaag 128156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 141386 - 141332
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    ||||| |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  141386 catagtcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaag 141332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 128151 - 128118
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  128151 ctaaagcatctgaagaaaactgcgtctgaagcta 128118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 141327 - 141295
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||||||    
T  141327 ctaaagcatctgaagaaaactgcgtctgaagct 141295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #6
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 215224 - 215292
Alignment:
Q  30 tcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    |||||||||||||| | |||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  215224 tcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 215292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 68; Significance: 9e-31; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 22404 - 22313
Alignment:
Q  38 gaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  22404 gaacaaaagagagcaaagaaatcatcaagaagaggaacctaaagcatctgaagaaaactgcgtctgaagttttgaagtgcttctgaagtttc 22313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 64; Significance: 2e-28; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 1284 - 1172
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||                ||||||||||||||||||||||||    
T  1284 cataggcaaagttaatcaatttcaataggtcttggaagaacaaaagagagcacaggaacc----------------taaagcatctgaagaaaactgcgt 1201  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  1200 ctgaagctatgaagtgcttctgaagtttc 1172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 2e-28; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 24882135 - 24882259
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||                ||||||||||||||||||||||||    
T  24882135 catagacaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaacc----------------taaagcatctgaagaaaactgcgt 24882218  T
Q  101 ctgaagctatgaagtgtttctgaagtttctaatgcctttga 141  Q
    ||||||||||||||||||||||||||| | | |||||||||    
T  24882219 ctgaagctatgaagtgtttctgaagttacaagtgcctttga 24882259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13174317 - 13174422
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||| ||||     
T  13174317 catagacaaagttaatcaattt-aataggtcttggaagaacaaaagagagctaaggaatcatcaagaagagaaacctacaagcatctgaagaaatctgcc 13174415  T
Q  100 tctgaag 106  Q
    |||||||    
T  13174416 tctgaag 13174422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26209280 - 26209389
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || |||||||||||||||||||||||||    
T  26209280 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaactgcgt 26209363  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  26209364 ctgaagctatgaagtgcttctgaagt 26209389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 8998667 - 8998750
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||| |||| |||||||    
T  8998667 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatctgaagaaatctgcatctgaag 8998750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 13682889 - 13682777
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  13682889 cataggcaaagttaatcaatttcagtaggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 13682806  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  13682805 ctgaagctatgaagtggttctgaagtttc 13682777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15216885 - 15216773
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || |                ||||||||||||||||||||||||    
T  15216885 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagaaatc----------------taaagcatctgaagaaaactgcgt 15216802  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  15216801 ctgaagctatgaagtgcttctgaagtttc 15216773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11086771 - 11086876
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| |||||| |||||| |||||||| ||||     
T  11086771 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctagaagcatatgaagaaatctgcc 11086869  T
Q  100 tctgaag 106  Q
    |||||||    
T  11086870 tctgaag 11086876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 8934089 - 8933980
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || ||||||||||||||||||||||| |    
T  8934089 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctgaagaaaactgcat 8934006  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  8934005 ctgaagctatgaagtgcttctgaagt 8933980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 12733898 - 12734007
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||                || ||||||||||| |||||||||||||    
T  12733898 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaagg----------------aatctaaagcatctaaagaaaactgcgt 12733981  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||| |||||||||    
T  12733982 ctgaagctatgaagtgcttctgaagt 12734007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3476055 - 3476112
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  3476055 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaa 3476112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18419701 - 18419644
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  18419701 cataggcaaagtcaataaatttcaataggtcttggaagaacaatggagagcaaaggaa 18419644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18441782 - 18441725
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  18441782 cataggcaaagtcaataaatttcaataggtcttggaagaacaatggagagcaaaggaa 18441725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29590577 - 29590524
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  29590577 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 29590524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48382731 - 48382674
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  48382731 cataggcaaagttaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 48382674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6043942 - 6043999
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  6043942 cataggcaaagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 6043999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 19710793 - 19710870
Alignment:
Q  29 gtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||||||||||||||||||| ||| || ||| ||||| | ||||||||||||||| ||| |||| |||||||    
T  19710793 gtcttggaagaacaaaagagagcaaatgaatcaacaaaaagagaagcctaaagcatctgaaaaaatctgcctctgaag 19710870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 6044003 - 6044051
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  6044003 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 6044051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 18419640 - 18419592
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  18419640 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 18419592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 18441721 - 18441673
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  18441721 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 18441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 3476114 - 3476166
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  3476114 ctaaagcatctgaagaaaactgtgtctgaagctatg-agtgcttctgaagtttc 3476166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19193467 - 19193410
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||  |||||||||||||    
T  19193467 cataggcaaagtcaatcaatttaaataggtcttggaagaacaatggagagcaaaggaa 19193410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 38593528 - 38593576
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagttt 128  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  38593528 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaagttt 38593576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 29590497 - 29590452
Alignment:
Q  81 gcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||    
T  29590497 gcatctgaagaaaactgcatatgaagctatgaagtgcttctgaagt 29590452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 38593475 - 38593524
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  38593475 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 38593524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 25201332 - 25201372
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  25201332 aatttcaataggtcttggaagaacaatggagagcaaaggaa 25201372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 25201376 - 25201421
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  25201376 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 25201421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 3166240 - 3166196
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  3166240 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 3166196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 109
Target Start/End: Complemental strand, 19193406 - 19193375
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||    
T  19193406 aaagcatctgaagaaaactgcgtctgaagcta 19193375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 44281002 - 44280958
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  44281002 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 44280958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 589736 - 589691
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  589736 aagcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 589691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 1368135 - 1368091
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  1368135 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 1368091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 9261574 - 9261603
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  9261574 aagcatctgaagaaaactgcgtctgaagct 9261603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 20491495 - 20491466
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  20491495 aagcatctgaagaaaactgcgtctgaagct 20491466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 21769737 - 21769781
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||    
T  21769737 agcatctgaagaaaactgcgtctgaagct-tgaagtgctcctgaag 21769781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 24244262 - 24244291
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  24244262 aagcatctgaagaaaactgcgtctgaagct 24244291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 30050025 - 30049996
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  30050025 aagcatctgaagaaaactgcgtctgaagct 30049996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 31116304 - 31116333
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  31116304 aagcatctgaagaaaactgcgtctgaagct 31116333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 40054493 - 40054542
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  || ||||||||||    
T  40054493 aagtcaatcaatttcaataggtcttggaagaacaatggaaagcaaaggaa 40054542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 106
Target Start/End: Original strand, 48805696 - 48805725
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||    
T  48805696 taaagcatctgaagaaaactgcgtctgaag 48805725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 1368181 - 1368141
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  1368181 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 1368141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 9160235 - 9160207
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  9160235 agcatctgaagaaaactgcgtctgaagct 9160207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 9160281 - 9160241
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  9160281 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 9160241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 9170690 - 9170662
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  9170690 agcatctgaagaaaactgcgtctgaagct 9170662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 9170736 - 9170696
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  9170736 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 9170696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 9171491 - 9171463
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  9171491 agcatctgaagaaaactgcgtctgaagct 9171463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 9171537 - 9171497
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  9171537 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 9171497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 21769691 - 21769731
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  21769691 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 21769731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 31116259 - 31116295
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    ||||||||||||||||||||||||||  |||||||||    
T  31116259 aatttcaataggtcttggaagaacaatggagagcaaa 31116295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 9709625 - 9709695
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| |||||||||| ||| || ||| ||| | | | |||||| |||||||||||||||    
T  9709625 aggtcttggaagaacaatagagagcaaatgaatcaacaaaaag-gaagcttaaagcgtctgaagaaaactgc 9709695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 14426880 - 14426810
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  14426880 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaagaaaactgc 14426810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 40054547 - 40054591
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||| ||||||||||||||  ||||| ||||||||    
T  40054547 aagcatctgaagaaaattgcgtctgaagcta--aagtgcttctgaag 40054591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 9e-28; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 156351 - 156433
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||| |||||||    
T  156351 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaagaaatctgcctctgaag 156433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 481488 - 481593
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| |||||||||| ||||| || |||||||||||||||||||||||||||||||| || | ||||||| |||||| ||||||||||||||| ||||     
T  481488 catagacaaagttaatcaatttaaa-aggtcttggaagaacaaaagagagcaaaggaatcaacgagaagagaaacctagaagcatctgaagaaatctgcc 481586  T
Q  100 tctgaag 106  Q
    |||||||    
T  481587 tctgaag 481593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 117663 - 117623
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  117663 aatttcaataggtcttggaagaacaatagagagcaaaggaa 117623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 60; Significance: 6e-26; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 36119 - 36007
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  36119 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 36036  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  36035 ctgaagctatgaagtgcttctgaagtttc 36007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 5503 - 5421
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| | |||| |||||||    
T  5503 aataggtcttggaagaacaaaagagagcaaaggaatcaacaagaagagaaacctaaagcatctgaagatatctgcctctgaag 5421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 9e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6214 - 6318
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || || || ||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||||| |||| |    
T  6214 catagacaaagttgatcaaatttaataggtcttggaagaacaaaagagagcaaaggaatcaacaa-aagagaaacctaaagcatctgaagaaatctgctt 6312  T
Q  101 ctgaag 106  Q
    ||||||    
T  6313 ctgaag 6318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 57; Significance: 3e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 70179 - 70070
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||                |||| |||||||||||||||||||||||    
T  70179 cataggcaaagttaataaatttcaataggtcttggaagaacaatagagagcaaagg----------------aacccaaagcatctgaagaaaactgcgt 70096  T
Q  101 ctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||| ||||| |||||||||    
T  70095 ctgaagctataaagtggttctgaagt 70070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 56; Significance: 1e-23; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 6038 - 6150
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| |                ||||||||||||||||||||||||    
T  6038 cataggcaaagttattcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaagcatctgaagaaaactgcgt 6121  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  6122 ctgaagctatgaagtgcttctgaagtttc 6150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 54; Significance: 2e-22; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 626 - 731
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || || || ||||||||||| || |||||||||||||||||||| || ||| ||||| ||||||||||||||||||||| |||| |    
T  626 catagacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacctaaagcatctgaagaaatctgcct 725  T
Q  101 ctgaag 106  Q
    ||||||    
T  726 ctgaag 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 54; Significance: 2e-22; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 819 - 924
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    ||||| ||||||| || || || ||||||||||| || |||||||||||||||||||| || ||| ||||| ||||||||||||||||||||| |||| |    
T  819 catagacaaagttgatcaaatttaataggtcttgtaaaaacaaaagagagcaaaggaatcaacaaaaagagaaacctaaagcatctgaagaaatctgcct 918  T
Q  101 ctgaag 106  Q
    ||||||    
T  919 ctgaag 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 53; Significance: 8e-22; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 12117 - 12021
Alignment:
Q  29 gtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||| ||||||||||||||||| ||||||| || ||| ||||| | |||||||||||||||||||||||||||||||| | ||||||| | ||||||    
T  12117 gtctcggaagaacaaaagagaggaaaggaatcaacaaaaagagaagcctaaagcatctgaagaaaactgcgtctgaagttttgaagtgctcctgaag 12021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 52; Significance: 3e-21; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 7122 - 7010
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||                || || ||||||||||||||||||||||| |    
T  7122 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaa----------------agaaatctaaagcatctgaagaaaactgcat 7039  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  7038 ctgaagctatgaagtgcttctgaagtttc 7010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 52; Significance: 3e-21; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15449 - 15337
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||||||||| ||||||||||| |||||||||||||| |||||||||||                ||| ||||||||||||||||||||||| |    
T  15449 cataggcaaagttaatcaatttcaatagttcttggaagaacaatagagagcaaag----------------taatctaaagcatctgaagaaaactgctt 15366  T
Q  101 ctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||| ||||||||||||    
T  15365 ctgaagctatgaagtgcttctgaagtttc 15337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 1e-20; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 62124 - 62019
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| ||||||| || ||||| |||||||||||||||||||||||||||| |||||| || ||||||||| |||||| |||||||||||||||  |||     
T  62124 catagacaaagttgatcaattt-aataggtcttggaagaacaaaagagagctaaggaatcaacaagaagagaaacctagaagcatctgaagaaatatgcc 62026  T
Q  100 tctgaag 106  Q
    |||||||    
T  62025 tctgaag 62019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 117685 - 117580
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaaactgcg 99  Q
    ||||| ||||||| || ||||| |||||||||||||||||||||||||||| ||| || || ||||||||| |||||| ||||||||||||||| ||||     
T  117685 catagacaaagttcatcaattt-aataggtcttggaagaacaaaagagagctaagaaatcaacaagaagagaaacctagaagcatctgaagaaatctgcc 117587  T
Q  100 tctgaag 106  Q
    |||||||    
T  117586 tctgaag 117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 50; Significance: 5e-20; HSPs: 2)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 328 - 271
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  328 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaaggaa 271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 269 - 216
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaag-ctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  269 ctaaagcatctgaagaaaactgcgtctgaagcctatg-agtgcttctgaagtttc 216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 48; Significance: 8e-19; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 7679 - 7600
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    |||||||||||||| ||||||||||||||||| || ||| ||||| | ||||||||||||||||||| |||| |||||||    
T  7679 aggtcttggaagaaaaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaagaaatctgcctctgaag 7600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 48; Significance: 8e-19; HSPs: 4)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 29997 - 29946
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29997 aaagcatctgaagaaaactgcgtctgaagctatgaagtgcttctgaagtttc 29946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30049 - 29996
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  30049 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 29996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #3
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 36535 - 36579
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||    
T  36535 agcatctgaagaaaactgcgtctgaagct-taaagtgcttctgaag 36579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #4
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 36489 - 36529
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  36489 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 36529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 46; Significance: 1e-17; HSPs: 2)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2575 - 2518
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  2575 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagaacaaaggaa 2518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739; HSP #2
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 2516 - 2464
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  2516 ctaaagcatctgaagaaagctgcgtctgaagctatg-agtgcttctgaagtttc 2464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 46; Significance: 1e-17; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12498 - 12555
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||    
T  12498 cataggcaaagttaatcaatttcaataggtcttggaagaacaatatagagcaaaggaa 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 12559 - 12607
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  12559 aaagcatctgaagaaaactgcgtctgaagcgatggagtggttctgaagt 12607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 46; Significance: 1e-17; HSPs: 4)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7812 - 7759
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaa 54  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  7812 cataggcaaagttaatcaatttcaataggtcttggaagaacaatagagagcaaa 7759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 7752 - 7719
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagcta 109  Q
    ||||||||||||||||||||||||||||||||||    
T  7752 ctaaagcatctgaagaaaactgcgtctgaagcta 7719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #3
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 7246 - 7197
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| |||||||| |||||||||||||||||  |||||||||||||    
T  7246 aagtaaattaatttcaaaaggtcttggaagaacaatggagagcaaaggaa 7197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #4
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 7192 - 7148
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  7192 aagcatctaaagaaaactgcgtctgaagcta--aagtgcttctgaag 7148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 5e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 163708 - 163595
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttgg-aagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcg 99  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||                ||  |||||||||||||||||||| ||    
T  163708 cataggcaaagttaatcaatttcaataggtcttggaaagaacaatagagagcaaagg----------------aatttaaagcatctgaagaaaactacg 163625  T
Q  100 tctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||| ||||||||||||    
T  163624 tctgaagctatgaagtgcttctgaagtttc 163595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 44; Significance: 2e-16; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 3611 - 3682
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| | ||||||||||| ||||||| ||||    
T  3611 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatccgaagaaatctgc 3682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 44; Significance: 2e-16; HSPs: 2)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 10022 - 10073
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  10022 aaagcatctgaagaaaactgcgtctgaagctataaagtgcttctgaagtttc 10073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #2
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9961 - 10018
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  9961 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 10018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 2e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 35575 - 35512
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaag 90  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| | ||||||||||||||||    
T  35575 aggtcttggaagaacaaaagagagcaaaggaatcaacaaaaagagaagcctaaagcatctgaag 35512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 44; Significance: 2e-16; HSPs: 4)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 5800 - 5749
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  5800 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagtttc 5749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 13212 - 13161
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  13212 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagtttc 13161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5861 - 5804
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  5861 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 5804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13273 - 13216
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  13273 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 13216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 42; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2768 - 2825
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  2768 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102; HSP #2
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 2829 - 2877
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  2829 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 2877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 42; Significance: 0.000000000000003; HSPs: 4)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11789 - 11846
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  11789 cataggcaaagtcaatcaatttcaataggtcttggaagaacaatggagagcaaaggaa 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 11850 - 11898
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  11850 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttctgaagt 11898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 15681 - 15729
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  15681 aaagcatctgaagaaaactgcgtctgaagctaagaagtgcttcttaagt 15729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15620 - 15677
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||| ||||| | | ||||||||||||||||||||||||||  |||||||||||||    
T  15620 cataggtaaagtcattcaatttcaataggtcttggaagaacaatggagagcaaaggaa 15677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 58982 - 59092
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgt 100  Q
    |||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||| |                |||| ||||||||||||| |||||    
T  58982 cataggcaaatttattcaatttcaataggtcttggaagaacaatagagagcaaaggaatc----------------taaaccatctgaagaaaattgcgt 59065  T
Q  101 ctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||| ||||||||||    
T  59066 ctgaagctatgaagtgcttctgaagtt 59092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 58808 - 58757
Alignment:
Q  76 ctaaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtt 127  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  58808 ctaaagcatctgaagaaaactgcgtctgaagatataaagtgcttctgaagtt 58757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 58867 - 58810
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||| ||||||| | | |||||||||||||||||||||||| | ||||||||||||    
T  58867 cataggtaaagttattcattttcaataggtcttggaagaacaataaagagcaaaggaa 58810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 61614 - 61522
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaaccta-aagcatctgaagaaa 93  Q
    ||||| ||||||| || ||||| |||||||||| ||| |||||||||||||||||||| || |  |||||| |||||| |||||||||||||||    
T  61614 catagacaaagttgatcaattt-aataggtcttagaaaaacaaaagagagcaaaggaatcaacgtgaagagaaacctagaagcatctgaagaaa 61522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 3938 - 3898
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  3938 aatttcaataggtcttggaagaacaatgtagagcaaaggaa 3898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 21011 - 20932
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||| ||||||||||  |  || ||| ||||| | ||||||||||||||||||| |||| |||||||    
T  21011 aggtcttggaagaacaatagagagcaaataattcaacaaaaagagaagcctaaagcatctgaagaaatctgcctctgaag 20932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 34; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 1382 - 1507
Alignment:
Q  1 cataggcaaagttaataaatttcaataggtcttggaagaacaaa-agagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcg 99  Q
    ||||| ||||||| || || || |||||||||| |||||||||| | |||||||    | || ||| ||||| | |||||||| ||| ||||||||||||    
T  1382 catagacaaagttgattaaatttaataggtcttagaagaacaaataaagagcaagaatatcaacaaaaagagaagcctaaagcctctaaagaaaactgcg 1481  T
Q  100 tctgaagctatgaagtgtttctgaag 125  Q
    ||||||| ||||||||| | ||||||    
T  1482 tctgaagttatgaagtgctcctgaag 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 34; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 2852 - 2811
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaac 59  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  2852 aatttcaataggtcttggaagaacaatggagagcaaaggaac 2811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 2807 - 2763
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  2807 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 2763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 34; Significance: 0.0000000002; HSPs: 4)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 18899 - 18948
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  18899 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 18948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 18952 - 18998
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  18952 taaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 18998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 28293 - 28342
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  28293 aagtcaattaatttcaataggtcttggaagaacaatggagagcaaaggaa 28342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 28346 - 28392
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  28346 taaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 28392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477 (Bit Score: 33; Significance: 0.0000000007; HSPs: 2)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 1429 - 1474
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  1429 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477; HSP #2
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 1376 - 1425
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||||||||| ||  |||||||||||||    
T  1376 aagtcaattaatttcaataggtcttggaagaataatggagagcaaaggaa 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 33; Significance: 0.0000000007; HSPs: 2)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 2125 - 2165
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  2125 aatttcaataggtcttggaagaacaatggagagcaaaggaa 2165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204; HSP #2
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 2169 - 2214
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  2169 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 33; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 5139 - 5099
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  5139 aatttcaataggtcttggaagaacaatggagagcaaaggaa 5099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 5094 - 5050
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||| ||||||||||  ||||| ||||||||    
T  5094 aagcatctgaagaaaactgcatctgaagcta--aagtgcttctgaag 5050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 33; Significance: 0.0000000007; HSPs: 4)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 12993 - 13033
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  12993 aatttcaataggtcttggaagaacaatggagagcaaaggaa 13033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 13298 - 13338
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  13298 aatttcaataggtcttggaagaacaatggagagcaaaggaa 13338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 13038 - 13082
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  13038 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 13082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 13343 - 13387
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  13343 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 13387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 504 - 464
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  504 aatttcaataggtcttggaagaacaatggagagcaaaggaa 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 27224 - 27179
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagt 126  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||    
T  27224 aagcatctgaagaaaactgcgtctgaagc--tgaagtgcttctgaagt 27179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 20179 - 20227
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||| ||||||||| ||||||||| | ||||||    
T  20179 taaagcatctgaagaaaactacgtctgaagttatgaagtgctcctgaag 20227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 34850 - 34890
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  34850 aatttcaataggtcttggaagaacaatggagagcaaaggaa 34890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 34894 - 34939
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||    
T  34894 aaagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 34939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 33; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 36426 - 36466
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  36426 aatttcaataggtcttggaagaacaatggagagcaaaggaa 36466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 36471 - 36515
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  36471 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 36515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 6449 - 6520
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  6449 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 6520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 20510 - 20554
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  20510 aagcatctgaagaaaactgcgtctgaagc--tgaagtgcttctgaag 20554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.000000003; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 56472 - 56511
Alignment:
Q  19 atttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  56472 atttcaataggtcttggaagaacaatggagagcaaaggaa 56511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 56515 - 56566
Alignment:
Q  78 aaagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtttc 129  Q
    ||||||||||||||||||||||||| |||||| |||||| |  |||||||||    
T  56515 aaagcatctgaagaaaactgcgtctcaagctaagaagtgctcttgaagtttc 56566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 32; Significance: 0.000000003; HSPs: 3)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 7507 - 7551
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  7507 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 7551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 10371 - 10415
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaag 125  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  10371 aagcatctgaagaaaactgcgtctgaagcta--aagtgcttctgaag 10415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 10326 - 10363
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaag 55  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  10326 aatttcaataggtcttggaagaacaatggagagcaaag 10363  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 2003 - 1969
Alignment:
Q  24 aataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||| ||||||||||||||||||||||||||    
T  2003 aataggtcctggaagaacaaaagagagcaaaggaa 1969  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 32640 - 32670
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagcta 109  Q
    |||||||||||||||||||||||||||||||    
T  32640 aagcatctgaagaaaactgcgtctgaagcta 32670  T

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Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 32595 - 32635
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  32595 aatttcaataggtcttggaagaacaatgtagagcaaaggaa 32635  T

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Target: scaffold0387 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 7710 - 7681
Alignment:
Q  77 taaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||||||||||||||||||||||||||    
T  7710 taaagcatctgaagaaaactgcgtctgaag 7681  T

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Target: scaffold0217 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 19398 - 19334
Alignment:
Q  33 tggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||| |||||||||||||| || ||| ||| | | | ||||||||||||||||||||||    
T  19398 tggaagaacaatagagagcaaaggaatcaacaaaaag-gaagcttaaagcatctgaagaaaactgc 19334  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.00000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 51784 - 51833
Alignment:
Q  9 aagttaataaatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||| ||| ||||||||||||||||| ||||||||  |||||||||||||    
T  51784 aagtcaatcaatttcaataggtcttgaaagaacaatggagagcaaaggaa 51833  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.00000005; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 53894 - 53923
Alignment:
Q  79 aagcatctgaagaaaactgcgtctgaagct 108  Q
    ||||||||||||||||||||||||||||||    
T  53894 aagcatctgaagaaaactgcgtctgaagct 53923  T

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Target: scaffold0028; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 5326 - 5397
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||| | |||||||||||||    
T  5326 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtttgaagaaaactgc 5397  T

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Target: scaffold0627 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 7788 - 7828
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  7788 aatttcaataggtcttggaagaacaatgaagagcaaaggaa 7828  T

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Target: scaffold0391 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 1927 - 1967
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  1927 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 1967  T

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Target: scaffold0290 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 18361 - 18393
Alignment:
Q  26 taggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||| |||||||||||||||||||||||||||    
T  18361 taggttttggaagaacaaaagagagcaaaggaa 18393  T

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Target: scaffold0267 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 5910 - 5950
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||| ||||||||||||||||||||  |||||||||||||    
T  5910 aatttaaataggtcttggaagaacaatggagagcaaaggaa 5950  T

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Target: scaffold0133 (Bit Score: 29; Significance: 0.0000002; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 42211 - 42251
Alignment:
Q  18 aatttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  42211 aatttcaataggtcttggaagaacaatggaaagcaaaggaa 42251  T

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Target: scaffold0133; HSP #2
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 42257 - 42285
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagct 108  Q
    |||||||||||||||||||||||||||||    
T  42257 agcatctgaagaaaactgcgtctgaagct 42285  T

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Target: scaffold2108 (Bit Score: 28; Significance: 0.0000007; HSPs: 2)
Name: scaffold2108
Description:

Target: scaffold2108; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 100 - 54
Alignment:
Q  80 agcatctgaagaaaactgcgtctgaagctatgaagtgtttctgaagtt 127  Q
    |||||||||||||||||| |||||||||| ||||||| | ||||||||    
T  100 agcatctgaagaaaactgtgtctgaagct-tgaagtgctcctgaagtt 54  T

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Target: scaffold2108; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 145 - 106
Alignment:
Q  19 atttcaataggtcttggaagaacaaaagagagcaaaggaa 58  Q
    |||||||||||||||||||||||||  || ||||||||||    
T  145 atttcaataggtcttggaagaacaatggaaagcaaaggaa 106  T

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Target: scaffold1359 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 429 - 499
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||||||||||||| | |||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  429 aggtcttggaagaacaataaagagcaaaggaatcaacaaaaag-gaagcttaaagcgtctgaagaaaactgc 499  T

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Target: scaffold0452 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 1608 - 1679
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgc 98  Q
    ||||||| ||||||||| | |||||||||||| || ||| ||| | | | |||||| |||||||||||||||    
T  1608 aggtcttagaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgc 1679  T

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Target: scaffold0297 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 17352 - 17297
Alignment:
Q  35 gaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaag 90  Q
    |||||||||||||||||||||||| || ||| ||||  | |||||||||| |||||    
T  17352 gaagaacaaaagagagcaaaggaatcaacaaaaagataagcctaaagcatttgaag 17297  T

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Target: scaffold0132 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 37784 - 37862
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaaccatcaagaagagtaacctaaagcatctgaagaaaactgcgtctgaag 106  Q
    ||||||| | |||||| |||| |||||| ||| || ||| ||||| | ||||||||||||||||||| |||| |||||||    
T  37784 aggtcttcgtagaacagaagaaagcaaaagaatcaacaa-aagagaagcctaaagcatctgaagaaatctgcctctgaag 37862  T

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Target: scaffold0003 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 58
Target Start/End: Original strand, 89812 - 89843
Alignment:
Q  27 aggtcttggaagaacaaaagagagcaaaggaa 58  Q
    ||||||||||||||||| ||||||||||||||    
T  89812 aggtcttggaagaacaatagagagcaaaggaa 89843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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