View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5706-36 (Length: 141)
Name: Solexa-NF5706-36
Description: NF5706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5706-36 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 6e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 6e-69
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 15051633 - 15051498
Alignment:
| Q |
6 |
agtagcaaaggtctctaaaactttcacattgcagttgcaatatcaattaagaacctttattcaaaaccttggaaacaacattcactcactcaactcaatc |
105 |
Q |
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| T |
15051633 |
agtaacaaaggtctctaaaactttcacattgcagttgcaatatcaattaagaacctttattcaaaaccttggaaacaacattcactcactcaactcaatc |
15051534 |
T |
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| Q |
106 |
aacctgttgggcataactcatagttaatgataagtg |
141 |
Q |
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| T |
15051533 |
aacctgttgggcataactcatagttaatgataagtg |
15051498 |
T |
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