View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5709-18 (Length: 145)

Name: Solexa-NF5709-18
Description: NF5709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5709-18
Solexa-NF5709-18
[»] chr5 (31 HSPs)
chr5 (4-138)||(14868958-14869092)
chr5 (42-135)||(43196902-43196995)
chr5 (42-145)||(22394125-22394228)
chr5 (42-131)||(3598706-3598795)
chr5 (35-145)||(6497471-6497581)
chr5 (42-145)||(6542260-6542363)
chr5 (42-145)||(24490845-24490947)
chr5 (42-131)||(3598414-3598503)
chr5 (38-145)||(25329094-25329201)
chr5 (42-145)||(10461346-10461449)
chr5 (37-131)||(18786274-18786367)
chr5 (42-131)||(24491136-24491225)
chr5 (42-131)||(10461638-10461727)
chr5 (42-145)||(4122580-4122681)
chr5 (35-145)||(15969709-15969814)
chr5 (38-131)||(4122870-4122963)
chr5 (37-134)||(5933121-5933218)
chr5 (37-131)||(15969426-15969520)
chr5 (42-131)||(22394417-22394506)
chr5 (42-131)||(43197194-43197283)
chr5 (75-131)||(18786015-18786071)
chr5 (42-145)||(7133404-7133510)
chr5 (63-131)||(41137163-41137231)
chr5 (37-120)||(41137444-41137527)
chr5 (42-131)||(5933418-5933507)
chr5 (42-134)||(40588939-40589031)
chr5 (42-134)||(40589542-40589634)
chr5 (42-145)||(7133127-7133229)
chr5 (42-131)||(6542552-6542640)
chr5 (42-134)||(29991105-29991195)
chr5 (95-131)||(6497246-6497282)
[»] chr2 (44 HSPs)
chr2 (38-145)||(14379110-14379217)
chr2 (42-145)||(2395436-2395539)
chr2 (38-145)||(13572750-13572857)
chr2 (42-145)||(18369014-18369117)
chr2 (37-145)||(4171804-4171912)
chr2 (42-145)||(28921472-28921575)
chr2 (42-145)||(29683453-29683556)
chr2 (42-134)||(41594241-41594333)
chr2 (42-145)||(10748495-10748598)
chr2 (42-145)||(30432874-30432977)
chr2 (42-145)||(42705231-42705334)
chr2 (37-145)||(33940677-33940785)
chr2 (42-145)||(12806828-12806931)
chr2 (38-145)||(41593948-41594055)
chr2 (42-140)||(3948365-3948463)
chr2 (42-131)||(37609248-37609337)
chr2 (42-138)||(30432597-30432693)
chr2 (42-145)||(3371581-3371684)
chr2 (37-131)||(29683172-29683266)
chr2 (42-145)||(7877324-7877428)
chr2 (42-145)||(32521754-32521857)
chr2 (37-131)||(7877617-7877712)
chr2 (42-145)||(37608958-37609060)
chr2 (42-131)||(3371303-3371392)
chr2 (35-131)||(2395151-2395247)
chr2 (42-145)||(19204871-19204975)
chr2 (42-145)||(25318573-25318676)
chr2 (38-131)||(3948657-3948751)
chr2 (63-131)||(18369306-18369373)
chr2 (67-131)||(33940970-33941034)
chr2 (42-145)||(28921195-28921297)
chr2 (42-131)||(13572473-13572561)
chr2 (42-127)||(14379410-14379495)
chr2 (42-131)||(6880266-6880355)
chr2 (42-131)||(19204593-19204682)
chr2 (105-145)||(6880037-6880077)
chr2 (36-131)||(12806543-12806639)
chr2 (42-134)||(17458008-17458100)
chr2 (66-131)||(6164191-6164256)
chr2 (42-90)||(6880003-6880051)
chr2 (42-120)||(6235959-6236037)
chr2 (77-127)||(11713757-11713807)
chr2 (65-134)||(32521498-32521568)
chr2 (42-131)||(38873475-38873562)
[»] chr1 (31 HSPs)
chr1 (42-145)||(20061799-20061902)
chr1 (42-145)||(28031926-28032029)
chr1 (42-145)||(39027482-39027585)
chr1 (36-145)||(50625045-50625152)
chr1 (42-135)||(43191657-43191750)
chr1 (42-131)||(50096134-50096223)
chr1 (37-145)||(26244545-26244653)
chr1 (42-145)||(37172249-37172352)
chr1 (42-145)||(42155029-42155131)
chr1 (36-145)||(26244828-26244937)
chr1 (64-145)||(33836-33917)
chr1 (70-145)||(10914053-10914128)
chr1 (37-135)||(39288148-39288247)
chr1 (37-135)||(47829251-47829347)
chr1 (42-145)||(50096412-50096515)
chr1 (35-135)||(14602299-14602397)
chr1 (42-131)||(20062091-20062180)
chr1 (37-131)||(14602006-14602100)
chr1 (37-134)||(33553-33650)
chr1 (42-131)||(12322093-12322182)
chr1 (42-145)||(12322371-12322476)
chr1 (35-131)||(28031641-28031737)
chr1 (37-131)||(33619189-33619283)
chr1 (42-131)||(18963610-18963699)
chr1 (42-131)||(43191949-43192038)
chr1 (65-131)||(37172541-37172607)
chr1 (37-131)||(50616935-50617029)
chr1 (37-131)||(50624762-50624856)
chr1 (77-131)||(10913810-10913864)
chr1 (75-131)||(47828997-47829052)
chr1 (76-119)||(51999499-51999542)
[»] chr6 (34 HSPs)
chr6 (36-145)||(9571675-9571784)
chr6 (42-145)||(8926468-8926571)
chr6 (42-145)||(8936725-8936828)
chr6 (42-145)||(19661351-19661453)
chr6 (42-145)||(5404849-5404952)
chr6 (42-145)||(5409174-5409277)
chr6 (42-145)||(17238313-17238416)
chr6 (42-145)||(26272259-26272362)
chr6 (42-145)||(30608867-30608970)
chr6 (36-145)||(3485053-3485162)
chr6 (38-145)||(5924106-5924214)
chr6 (37-145)||(28853764-28853872)
chr6 (42-145)||(3345021-3345124)
chr6 (42-145)||(16525472-16525575)
chr6 (42-131)||(5140691-5140780)
chr6 (42-131)||(19661642-19661731)
chr6 (37-131)||(3345312-3345406)
chr6 (42-131)||(3484784-3484874)
chr6 (42-127)||(8926188-8926273)
chr6 (42-127)||(8936445-8936530)
chr6 (42-131)||(30609159-30609248)
chr6 (42-131)||(31717176-31717265)
chr6 (42-145)||(33783397-33783501)
chr6 (37-120)||(5404596-5404679)
chr6 (39-134)||(16525194-16525286)
chr6 (64-131)||(28853507-28853575)
chr6 (37-131)||(33783690-33783785)
chr6 (42-127)||(5923827-5923913)
chr6 (74-145)||(29819665-29819736)
chr6 (42-118)||(17238033-17238109)
chr6 (105-145)||(31717454-31717494)
chr6 (63-130)||(19129429-19129496)
chr6 (35-90)||(29819409-29819464)
chr6 (51-90)||(31717480-31717519)
[»] scaffold0817 (2 HSPs)
scaffold0817 (42-145)||(4261-4364)
scaffold0817 (42-145)||(3984-4087)
[»] chr7 (32 HSPs)
chr7 (42-145)||(19157972-19158075)
chr7 (42-145)||(20757371-20757474)
chr7 (42-135)||(24357-24450)
chr7 (42-135)||(40729352-40729445)
chr7 (42-145)||(42517146-42517249)
chr7 (37-145)||(44483505-44483613)
chr7 (42-145)||(44219295-44219398)
chr7 (42-140)||(22364658-22364753)
chr7 (42-131)||(34595612-34595701)
chr7 (42-131)||(42516868-42516957)
chr7 (42-145)||(34595319-34595423)
chr7 (42-131)||(13426585-13426674)
chr7 (42-131)||(22364944-22365033)
chr7 (42-135)||(35026733-35026825)
chr7 (42-128)||(827099-827186)
chr7 (42-128)||(829110-829197)
chr7 (42-131)||(19476687-19476778)
chr7 (36-145)||(829960-830067)
chr7 (36-145)||(1195140-1195247)
chr7 (42-127)||(44219591-44219676)
chr7 (65-145)||(22954610-22954690)
chr7 (42-103)||(13426326-13426387)
chr7 (42-131)||(35026446-35026534)
chr7 (42-145)||(31579710-31579814)
chr7 (45-131)||(44483233-44483320)
chr7 (42-131)||(34487143-34487232)
chr7 (34-131)||(19476386-19476485)
chr7 (76-140)||(34487426-34487491)
chr7 (75-127)||(44402996-44403048)
chr7 (77-130)||(1271508-1271561)
chr7 (108-145)||(31579498-31579535)
chr7 (75-127)||(39719389-39719441)
[»] chr4 (42 HSPs)
chr4 (42-145)||(17865255-17865358)
chr4 (38-145)||(42239350-42239459)
chr4 (41-145)||(32592743-32592847)
chr4 (42-145)||(37815620-37815724)
chr4 (42-145)||(4712457-4712559)
chr4 (42-145)||(17107711-17107813)
chr4 (42-135)||(26314477-26314570)
chr4 (33-145)||(12792564-12792676)
chr4 (42-135)||(13492885-13492978)
chr4 (35-140)||(39385176-39385281)
chr4 (42-145)||(16959764-16959868)
chr4 (39-135)||(989075-989170)
chr4 (36-131)||(13682999-13683094)
chr4 (42-131)||(989368-989457)
chr4 (42-135)||(16491936-16492028)
chr4 (35-131)||(5720947-5721042)
chr4 (37-145)||(11021952-11022060)
chr4 (50-145)||(46081435-46081529)
chr4 (36-145)||(22487499-22487606)
chr4 (49-118)||(13683303-13683372)
chr4 (42-131)||(26314768-26314857)
chr4 (42-134)||(11021674-11021766)
chr4 (42-145)||(9301848-9301950)
chr4 (37-127)||(16960061-16960151)
chr4 (42-131)||(16491648-16491737)
chr4 (42-131)||(37815342-37815431)
chr4 (42-145)||(43750226-43750327)
chr4 (45-131)||(2184687-2184774)
chr4 (37-120)||(17864943-17865026)
chr4 (37-131)||(43749943-43750037)
chr4 (42-131)||(17107433-17107522)
chr4 (42-145)||(9301573-9301674)
chr4 (77-131)||(17865012-17865066)
chr4 (37-131)||(22487216-22487310)
chr4 (42-131)||(32593033-32593121)
chr4 (42-134)||(39385451-39385544)
chr4 (36-90)||(46481251-46481305)
chr4 (42-90)||(2184425-2184473)
chr4 (42-90)||(46480947-46480995)
chr4 (77-127)||(52017782-52017832)
chr4 (64-131)||(5278987-5279054)
chr4 (75-130)||(14488096-14488151)
[»] chr8 (39 HSPs)
chr8 (37-145)||(6943936-6944044)
chr8 (37-135)||(2835382-2835480)
chr8 (36-145)||(18764280-18764389)
chr8 (42-135)||(3273009-3273102)
chr8 (42-135)||(13154528-13154621)
chr8 (42-145)||(9180324-9180427)
chr8 (39-145)||(13405727-13405833)
chr8 (42-134)||(31402913-31403006)
chr8 (37-145)||(13154235-13154343)
chr8 (42-145)||(26479327-26479429)
chr8 (42-120)||(6892052-6892130)
chr8 (42-131)||(31186375-31186464)
chr8 (37-131)||(220509-220602)
chr8 (37-131)||(689664-689757)
chr8 (37-131)||(734132-734225)
chr8 (37-131)||(858028-858121)
chr8 (42-131)||(6943658-6943747)
chr8 (42-98)||(31186670-31186726)
chr8 (40-145)||(24332541-24332642)
chr8 (36-134)||(2835120-2835218)
chr8 (42-131)||(24332262-24332352)
chr8 (42-131)||(9180046-9180135)
chr8 (45-131)||(26479587-26479673)
chr8 (37-131)||(31403206-31403300)
chr8 (36-90)||(31685976-31686030)
chr8 (77-130)||(13232236-13232289)
chr8 (75-131)||(27993311-27993366)
chr8 (75-131)||(28050613-28050668)
chr8 (63-131)||(31685692-31685760)
chr8 (35-131)||(13405442-13405538)
chr8 (105-145)||(31685950-31685990)
chr8 (42-131)||(6891780-6891868)
chr8 (42-145)||(20112695-20112796)
chr8 (77-127)||(10872953-10873003)
chr8 (65-131)||(24934593-24934659)
chr8 (67-109)||(37586067-37586109)
chr8 (41-119)||(37586321-37586399)
chr8 (77-130)||(28346667-28346720)
chr8 (42-120)||(3272750-3272829)
[»] chr3 (37 HSPs)
chr3 (42-145)||(55092486-55092589)
chr3 (42-145)||(17109852-17109955)
chr3 (42-145)||(46962583-46962686)
chr3 (42-145)||(49500122-49500225)
chr3 (42-145)||(50645751-50645854)
chr3 (37-135)||(14545831-14545929)
chr3 (36-145)||(32315371-32315480)
chr3 (42-145)||(29838295-29838398)
chr3 (42-145)||(26582891-26582994)
chr3 (42-133)||(27934742-27934833)
chr3 (42-145)||(38807817-38807920)
chr3 (42-145)||(42093396-42093499)
chr3 (42-131)||(14546129-14546218)
chr3 (42-145)||(52835824-52835927)
chr3 (36-131)||(16056344-16056438)
chr3 (37-131)||(49499839-49499933)
chr3 (42-131)||(27284971-27285060)
chr3 (42-131)||(27934452-27934541)
chr3 (38-131)||(38807535-38807628)
chr3 (42-131)||(52835546-52835635)
chr3 (37-131)||(33162613-33162707)
chr3 (37-131)||(46962875-46962969)
chr3 (42-131)||(32315669-32315757)
chr3 (49-145)||(26582621-26582716)
chr3 (42-131)||(7029386-7029475)
chr3 (34-127)||(29838591-29838684)
chr3 (42-134)||(49121716-49121809)
chr3 (39-131)||(21323181-21323273)
chr3 (42-145)||(33162325-33162424)
chr3 (42-127)||(50645473-50645558)
chr3 (63-123)||(19590460-19590520)
chr3 (42-145)||(42093674-42093776)
chr3 (87-145)||(27285248-27285305)
chr3 (42-90)||(17109748-17109796)
chr3 (42-131)||(55092206-55092297)
chr3 (77-127)||(12673682-12673732)
chr3 (77-145)||(889164-889232)
[»] scaffold0137 (2 HSPs)
scaffold0137 (37-145)||(36763-36869)
scaffold0137 (42-120)||(37039-37117)
[»] scaffold0006 (2 HSPs)
scaffold0006 (37-145)||(212408-212516)
scaffold0006 (42-131)||(212705-212794)
[»] scaffold0170 (2 HSPs)
scaffold0170 (42-145)||(8542-8646)
scaffold0170 (77-131)||(8835-8889)
[»] scaffold0103 (2 HSPs)
scaffold0103 (42-145)||(43278-43381)
scaffold0103 (42-131)||(43571-43660)
[»] scaffold0021 (2 HSPs)
scaffold0021 (42-145)||(118311-118413)
scaffold0021 (42-131)||(118030-118119)
[»] scaffold0028 (1 HSPs)
scaffold0028 (39-140)||(74198-74298)
[»] scaffold0126 (2 HSPs)
scaffold0126 (42-145)||(35995-36098)
scaffold0126 (42-131)||(36287-36375)
[»] scaffold0147 (3 HSPs)
scaffold0147 (42-131)||(25124-25213)
scaffold0147 (42-132)||(25432-25518)
scaffold0147 (77-139)||(25397-25458)
[»] scaffold0167 (1 HSPs)
scaffold0167 (42-131)||(4680-4769)
[»] scaffold0045 (2 HSPs)
scaffold0045 (42-104)||(43988-44050)
scaffold0045 (37-104)||(43906-43973)


Alignment Details
Target: chr5 (Bit Score: 123; Significance: 1e-63; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 1e-63
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 14869092 - 14868958
Alignment:
Q  4 aggtgagttgagatgataaataattaaaagtaataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatat 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  14869092 aggtgagttgagatgataaataattaaaagtaataggtttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaatat 14868993  T
Q  104 tattttggttttagtccctgcaaatataaaaattt 138  Q
    | |||||||||||||||||||||||||||||||||    
T  14868992 ttttttggttttagtccctgcaaatataaaaattt 14868958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 43196902 - 43196995
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  43196902 ttaaatatgaaaatagtccttacaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 43196995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 22394125 - 22394228
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  22394125 ttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 22394224  T
Q  142 tttt 145  Q
    ||||    
T  22394225 tttt 22394228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 3598795 - 3598706
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  3598795 ttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatata 3598706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 6497581 - 6497471
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||||| |||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||||    
T  6497581 aataggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttgattttagttcctgcaaatataaaa 6497482  T
Q  135 attttgatttt 145  Q
    | |||| ||||    
T  6497481 aatttggtttt 6497471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 6542260 - 6542363
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||| || |  |||||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  6542260 ttaaatatgaaaattgttcccgcaaatatctgatattttggttttagtccatgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttga 6542359  T
Q  142 tttt 145  Q
    ||||    
T  6542360 tttt 6542363  T

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Target: chr5; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 24490845 - 24490947
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||     
T  24490845 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatt-ttttggttttagtccctgcaaatatagaaaatttgg 24490943  T
Q  142 tttt 145  Q
    ||||    
T  24490944 tttt 24490947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 3598414 - 3598503
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| ||||  |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  3598414 ttaaatatgaaaatggtccctgcaaatatctgacattttggatttagtccctgtaaaaatatttttttggttttagtccctgcaaatata 3598503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 25329094 - 25329201
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaatt 137  Q
    |||||||||||||||||||||||  |||||||||||| |||||| |||||||  ||||||||||||  |||| |||||||||||| |||||||||||| |    
T  25329094 aggtttaaatatgaaaatagtccccgcaaatatctgatattttgattttagttcctgtaaaaatatattttttgttttagtccctacaaatataaaaaat 25329193  T
Q  138 ttgatttt 145  Q
    ||||||||    
T  25329194 ttgatttt 25329201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 10461346 - 10461449
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  ||||||||| | ||||||||||||||||  |||||||||||| ||||  |||||||||||||||||||||||| ||||     
T  10461346 ttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtctttgtaaaaatattttttttattttagtccctgcaaatataaaaaatttgg 10461445  T
Q  142 tttt 145  Q
    ||||    
T  10461446 tttt 10461449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 18786367 - 18786274
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| |||| ||||  ||||||||||| | |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  18786367 taggtttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctgtaaaaatatttttttggttttagt-cctgcaaatata 18786274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 24491225 - 24491136
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||  |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  24491225 ttaaatatggaaatggtccctgcaataatctgacattttggttttagtccctgtaaaaatatttgtttggttttagtccctgcaaatata 24491136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 10461727 - 10461638
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| | ||||| |||||||| || |||||||||| ||||||||||||||||||||||||||    
T  10461727 ttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatata 10461638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 4122580 - 4122681
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||| |||||||||| |||||||| ||||||||| |  |  ||| |||||||||||||||||||||||| ||||     
T  4122580 ttaaatatgaaaatagtccctgcaaatatttgacattttgattttagtccctgtaaaaaaa--aaattgattttagtccctgcaaatataaaaaatttgg 4122677  T
Q  142 tttt 145  Q
    ||||    
T  4122678 tttt 4122681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 15969814 - 15969709
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||||| |||||| ||||||||||||  |||||||     ||||||| |||||||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  15969814 aataggcttaaatgtgaaaatagtccctgcaaata-----cattttgattttagtccctgtaaaaataattttttgattttagtccctgcaaatataaaa 15969720  T
Q  135 attttgatttt 145  Q
    | |||| ||||    
T  15969719 aatttggtttt 15969709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 4122963 - 4122870
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||||| ||||  |||| | ||||||||| | ||||| |||||||| || |||||||||| |||||||||||||||||| |||||||    
T  4122963 aggtttaaatatggaaatgttcctcgtaaatatctggcgttttgcttttagtccctataaaaatatttttttggttttagtccctgtaaatata 4122870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 5933121 - 5933218
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||| |||||||||||||| ||||  |||||||| ||||||||||||||||||| ||| ||   | |||||||  |||||||||||||||||||||||    
T  5933121 taggcttaaatatgaaaattgtccctgcaaatatgtgacattttggttttagtccctgcaatttttttatttttattttagtccctgcaaatataaaa 5933218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 15969426 - 15969520
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| |||||  ||||||| || | |||||||||||||| || |||||||||  |||||||||||||| |||||||||||    
T  15969426 taggcttaaatatggaaatggtccttacaaatatttggcgttttggttttagtccctataaaaatatatttttggttttagtctctgcaaatata 15969520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 22394506 - 22394417
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||||||||  | ||||||||  | |||||| ||||||  || |||||||||| ||||||||||||||| ||||||||||    
T  22394506 ttaaatatgaaaatagtcccggtaaatatctagcgttttggatttagttcctataaaaatatttttttggttttagtccatgcaaatata 22394417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 43197283 - 43197194
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  |||||||||||   |||| ||||||||| || |||||||||| ||||| ||||||||||||||||||||    
T  43197283 ttaaatatggaaatggtccctgcaaatatctggtgtttttgttttagtccctataaaaatatttttttgtttttagtccctgcaaatata 43197194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 18786015 - 18786071
Alignment:
Q  75 cattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||||| || |||||||||| ||||||||||||||| ||||||||||    
T  18786015 cattttggttttagtccctataaaaatatttttttggttttagtccttgcaaatata 18786071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 7133510 - 7133404
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgta--aaaatattatttt-ggttttagtccctgcaaatataaaaattt 138  Q
    |||||| |||||||||||   |||||||||||| |||||||||||| |   ||||  |||||||| |||| ||||||||||||||||||||||||| |||    
T  7133510 ttaaatgtgaaaatagtctccgcaaatatctgatattttggttttaatttttgtataaaaatattttttttggttttagtccctgcaaatataaaatttt 7133411  T
Q  139 tgatttt 145  Q
    || ||||    
T  7133410 tggtttt 7133404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 41137163 - 41137231
Alignment:
Q  63 gcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||| | ||||||||||| |  || |||||||||| ||||||||||||||| ||||||||||    
T  41137163 gcaaatatctggcgttttggttttaatacctataaaaatatttttttggttttagtccttgcaaatata 41137231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 41137527 - 41137444
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtcc 120  Q
    ||||||||||||||||||||||||  |||||||| ||| ||||| |||||||||  |||||   | || |||||||||||||||    
T  41137527 taggtttaaatatgaaaatagtccctgcaaatatttgatatttttgttttagtctttgtaattttttttttttggttttagtcc 41137444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 5933507 - 5933418
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| ||||  | ||||||||  | |||||| ||||||  || |||||||||  |||| |||||||||||||||||||||    
T  5933507 ttaaatatgaaaatggtccctgtaaatatctagcgttttggatttagttcctataaaaatatattttttgttttagtccctgcaaatata 5933418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 40589031 - 40588939
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    ||||||||| |||| ||||  |||||||||||   ||||| ||||| || || |||||| | | ||||| |||||||||||||||||||||||    
T  40589031 ttaaatatggaaatggtccctgcaaatatctggagttttgcttttaatccctataaaaaaaattttttgtttttagtccctgcaaatataaaa 40588939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 40589634 - 40589542
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    ||||||||| |||| ||||  ||||||||||| | ||||| ||||| || || |||||| |  | |||| |||||||||||||||||||||||    
T  40589634 ttaaatatggaaatggtccctgcaaatatctggcgttttgcttttaatccctataaaaaaaaaaatttgtttttagtccctgcaaatataaaa 40589542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 7133127 - 7133229
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||| ||||| | |||||| || |||||| ||||||||| || |||||||||| ||||||| ||| | |||  ||||||| ||  |||||    
T  7133127 ttaaatatgaaaatggtcct-gtaaatatatggcattttagttttagtctctttaaaaatatttttttggtattaattcctataaatatagaatatttga 7133225  T
Q  142 tttt 145  Q
    ||||    
T  7133226 tttt 7133229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 6542640 - 6542552
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  | ||||||||| |||||||| ||||||| || |||||| |  | |||| ||||||||||||||||||||    
T  6542640 ttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaaaaaaaatttg-ttttagtccctgcaaatata 6542552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 29991105 - 29991195
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||||||||||||| ||||   ||||||| || | |||  |||||||||  | |||||||||| ||||| ||||| |||||||||||||||||    
T  29991105 ttaaatatgaaaatggtccctccaaatatttggcgttt--gttttagtccatataaaaatatttttttgattttaatccctgcaaatataaaa 29991195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 6497246 - 6497282
Alignment:
Q  95 taaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  6497246 taaaaatatttttttgattttagtccctgcaaatata 6497282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 3e-40; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 14379110 - 14379217
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaatt 137  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| |    
T  14379110 aggtttaaatatgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatgtaaaaaat 14379209  T
Q  138 ttgatttt 145  Q
    ||| ||||    
T  14379210 ttggtttt 14379217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 2395539 - 2395436
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||||||||||||| |||||    
T  2395539 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttttgttttaatccctgcaaatataaaaaatttga 2395440  T
Q  142 tttt 145  Q
    ||||    
T  2395439 tttt 2395436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 13572857 - 13572750
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaatt 137  Q
    ||||||||||||||||||||| || |||||||| |||||||||||||||| || ||||||||||||| |||||||||||||||| ||||||||||||| |    
T  13572857 aggtttaaatatgaaaatagttcttgcaaatatatgacattttggttttaatccctgtaaaaatatttttttggttttagtcccagcaaatataaaaaat 13572758  T
Q  138 ttgatttt 145  Q
    ||||||||    
T  13572757 ttgatttt 13572750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 18369014 - 18369117
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||     
T  18369014 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttgggttttagtccctgcaaatataaaaaatttgg 18369113  T
Q  142 tttt 145  Q
    ||||    
T  18369114 tttt 18369117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 4171912 - 4171804
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||     
T  4171912 taggtttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctcggtaaaaatatttttttggttttagtcccagcaaatataaaaaa 4171813  T
Q  137 tttgatttt 145  Q
    |||| ||||    
T  4171812 tttggtttt 4171804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 28921575 - 28921472
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||| |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  28921575 ttaaatatgaaaatagtccctgcaaatatatgacattttggttttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 28921476  T
Q  142 tttt 145  Q
    ||||    
T  28921475 tttt 28921472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 29683556 - 29683453
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||| |||||||||  ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  29683556 ttaaatatggaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 29683457  T
Q  142 tttt 145  Q
    ||||    
T  29683456 tttt 29683453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 41594333 - 41594241
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  41594333 ttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaa 41594241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 10748495 - 10748598
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||||||||||||   ||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||||     
T  10748495 ttaaatatgaaaatagtctctgcaaacatctgacattttggttttagtccctgtaaaaatatttttttggttttaatccctgcaaatataaaaaatttgg 10748594  T
Q  142 tttt 145  Q
    ||||    
T  10748595 tttt 10748598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 30432977 - 30432874
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||     
T  30432977 ttaaatatggaaatggtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatttttgg 30432878  T
Q  142 tttt 145  Q
    ||||    
T  30432877 tttt 30432874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 42705334 - 42705231
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||  |||||||||||||| ||||     
T  42705334 ttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtctctgtaaaaatatttttttggttttagtcagtgcaaatataaaaaatttgg 42705235  T
Q  142 tttt 145  Q
    ||||    
T  42705234 tttt 42705231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 33940677 - 33940785
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    |||| |||||||||||||||||||  |||||||||| |||||||| |||||||| ||||||||||||| |||| |||||||| ||||||||||||||||     
T  33940677 taggcttaaatatgaaaatagtccctgcaaatatcttacattttgattttagtccctgtaaaaatatttttttagttttagttcctgcaaatataaaaaa 33940776  T
Q  137 tttgatttt 145  Q
    |||| ||||    
T  33940777 tttggtttt 33940785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 12806931 - 12806828
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||| ||||  |||||||||| ||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||| ||||     
T  12806931 ttaaatatgaaaattgtccctgcaaatatctaacattttggttttagtccccgtaaaaatatttttttggttttagtcactgcaaatataaaaaatttgg 12806832  T
Q  142 tttt 145  Q
    ||||    
T  12806831 tttt 12806828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 41593948 - 41594055
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaatt 137  Q
    |||||||||| |||||||||| |  |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||| |    
T  41593948 aggtttaaatgtgaaaatagttcctgcaaatatctgatattttggttttagtccctgtaaaaatatttttttggttttagttcctgcaaatatagaaaat 41594047  T
Q  138 ttgatttt 145  Q
    ||| ||||    
T  41594048 ttggtttt 41594055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 3948365 - 3948463
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||||||||||||||||  ||||||| ||||||||||  |||||||| || |||||||||| |||||||||||||||||||||||||||||| ||||    
T  3948365 ttaaatatgaaaatagtccatgcaaatacctgacattttaattttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatttg 3948463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 37609337 - 37609248
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||| ||||||||||| | |||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  37609337 ttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaatata 37609248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 30432597 - 30432693
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattt 138  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||| ||| | ||||||||    
T  30432597 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaagtatttttttgattttagtccctgtaaaaacaaaaattt 30432693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 3371684 - 3371581
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||| |||  || |||||  ||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||||| ||||     
T  3371684 ttaaatatgaaaattgtctcagtaaatacgtgacattttggttttagtcccagtaaaaatatttttttagttttagtccctgcaaatataaaaaatttgg 3371585  T
Q  142 tttt 145  Q
    ||||    
T  3371584 tttt 3371581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 6e-23
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 29683172 - 29683266
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| |||||||||||||| ||||  ||||||||||| | |||||||||||||| || |||||||||| |||||||||||| |||||||||||||    
T  29683172 taggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagcccctgcaaatata 29683266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 7877324 - 7877428
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||||||||||||||||  |||||||||  |||||||| || ||||  ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  7877324 ttaaatatgaaaatagtccctgcaaatatcatacattttgattgtagttcctgtaaaaatattttttttggttttagtccctgcaaatataaaaaatttg 7877423  T
Q  141 atttt 145  Q
     ||||    
T  7877424 gtttt 7877428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 32521857 - 32521754
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaaattttg 140  Q
    ||||||||||||||||| || |||||||  ||||||||||||||||||| ||||||||||| || |||| |||||| |||||||||||||||||| ||||    
T  32521857 ttaaatatgaaaatagttct-gcaaataattgacattttggttttagtccctgtaaaaatattttttttagttttaatccctgcaaatataaaaaatttg 32521759  T
Q  141 atttt 145  Q
     ||||    
T  32521758 gtttt 32521754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 7877712 - 7877617
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatata 131  Q
    ||||||||||||||||||| ||||  ||||||||||| | |||||||| ||||| || |||||||| || ||||||||||||||||||||||||||    
T  7877712 taggtttaaatatgaaaatggtccctgcaaatatctggcgttttggttctagtccctataaaaatattttttttggttttagtccctgcaaatata 7877617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 37608958 - 37609060
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||||||| |||||  ||||| |||||||||||||||||||||||||| ||||||| | |||||  |||||||| |||||||||||||| ||||     
T  37608958 ttaaatatgaaaaaagtccctgcaaa-atctgacattttggttttagtcactggaaaaataattttttgtgtttagtccttgcaaatataaaaaatttgg 37609056  T
Q  142 tttt 145  Q
    ||||    
T  37609057 tttt 37609060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 3371303 - 3371392
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  | ||||||||| | |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  3371303 ttaaatatggaaatggtccaggtaaatatctggcgttttggttttagtccctgtaaaaatatttttttggttttagttcctgcaaatata 3371392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 2395151 - 2395247
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| ||||||||| |||| |||   ||||||||||| | ||||| |||||||| || |||||||||| ||||||||||||||||||||||||||    
T  2395151 aataggcttaaatatggaaatggtcactgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatata 2395247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 19204975 - 19204871
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||||||||||||||||  | ||||||| | ||||||||||||||||  |||||||||| || ||||  |||||||||||||||||||||||| ||||    
T  19204975 ttaaatatgaaaatagtccctgtaaatatccgtcattttggttttagtccttgtaaaaatatttttttttattttagtccctgcaaatataaaaaatttg 19204876  T
Q  141 atttt 145  Q
     ||||    
T  19204875 gtttt 19204871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 25318676 - 25318573
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||| |||| ||||| ||||||||||| | |||||||||||||| || |||||||||| ||||| |||||||| || |||||||| ||  |||||    
T  25318676 ttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaatatttttttgattttagtctctacaaatatagaatatttga 25318577  T
Q  142 tttt 145  Q
    ||||    
T  25318576 tttt 25318573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 3948751 - 3948657
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactg-taaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||||| |||| |||||   ||||||||||| |||| ||||||||| ||  |||||||||| ||||||||||||||||||||||||||    
T  3948751 aggtttaaatatggaaatggtcctcataaatatctgacgttttagttttagtccctaataaaaatatttttttggttttagtccctgcaaatata 3948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 18369373 - 18369306
Alignment:
Q  63 gcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||| | |||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  18369373 gcaaatatctggcgttttggttttagtccctataaaaatatt-ttttggttttagtccctgcaaatata 18369306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 33941034 - 33940970
Alignment:
Q  67 atatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||||| ||||||| || |||||||||| ||||||||||||||||||||||||||    
T  33941034 atatctgacgttttggctttagtccctttaaaaatatttttttggttttagtccctgcaaatata 33940970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 28921195 - 28921297
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||| |||| |||| ||||  ||||||||||||  ||||||| |||||| || |||||||||| |||||||||||||||||||||||||| ||  |||||    
T  28921195 ttaactatggaaatggtccctgcaaatatctgatgttttggtattagtccctataaaaatatt-ttttggttttagtccctgcaaatatagaatatttga 28921293  T
Q  142 tttt 145  Q
    ||||    
T  28921294 tttt 28921297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 13572473 - 13572561
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| | |||| ||||||||| || |||||||||| |||| |||||||||||||||||||||    
T  13572473 ttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccctataaaaatatt-tttttgttttagtccctgcaaatata 13572561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 14379495 - 14379410
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    ||||||||| |||| ||||  ||||||||||  | |||||||||||||| || |||||||||| ||||||||||||||| ||||||    
T  14379495 ttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaatatttttttggttttagtccttgcaaa 14379410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 6880355 - 6880266
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||||||||    ||||||||| | |||||| |||||||  | |||||||||| |||||||||||||| |||||||||||    
T  6880355 ttaaatatggaaatagtccctataaatatctggcgttttggatttagtccttataaaaatatttttttggttttagtctctgcaaatata 6880266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 19204593 - 19204682
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  |||||||| |  | ||||| ||||||||  | |||||||||| ||||||||||||||||||||||||||    
T  19204593 ttaaatatggaaatggtccctgcaaatatttagcgttttgattttagtccttataaaaatatttttttggttttagtccctgcaaatata 19204682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 6880037 - 6880077
Alignment:
Q  105 attttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  6880037 attttggttttagtccctgcaaatataaaaaatttgatttt 6880077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 12806543 - 12806639
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatat-tattttggttttagtccctgcaaatata 131  Q
    ||||| ||||||||| |||| ||||| | |||||| || | |||||| ||||||| || ||||||||| | |||| |||||||||||||||||||||    
T  12806543 ataggcttaaatatggaaatggtccttgtaaatatttggcgttttggatttagtccctataaaaatatatttttttgttttagtccctgcaaatata 12806639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 17458100 - 17458008
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||||||||||||| || |  ||||||||||    |||| ||||||||| || |||||||||| ||||||||||| || ||||||||||||||    
T  17458100 ttaaatatgaaaatggttcctgcaaatatctagtgttttcgttttagtccctataaaaatatttttttggttttaatctctgcaaatataaaa 17458008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 6164256 - 6164191
Alignment:
Q  66 aatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||| | ||||| ||||| || || |||||||||| |||||||||||||||| |||||||||    
T  6164256 aatatctggcgttttgattttaatccctataaaaatatttttttggttttagtcccagcaaatata 6164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 6880003 - 6880051
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtc 90  Q
    |||||||||||||| ||||   |||||||||||||||||||||||||||    
T  6880003 ttaaatatgaaaattgtccctacaaatatctgacattttggttttagtc 6880051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 6236037 - 6235959
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtcc 120  Q
    ||||||||||||||| ||||  |||||||| ||| ||||||||||| || |  |||| ||||| || ||||||||||||    
T  6236037 ttaaatatgaaaatactccttacaaatatcagacgttttggttttaatctccataaatatatttttatggttttagtcc 6235959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 11713807 - 11713757
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    |||||||||||||| ||||||||| || |||||| |||| |||||||||||    
T  11713807 ttttggttttagtccctgtaaaaaaataattttgtttttggtccctgcaaa 11713757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 32521498 - 32521568
Alignment:
Q  65 aaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaa 134  Q
    |||||| |||| ||||||||||||||  | |||||||| || ||||||||||||||| || ||||||||||    
T  32521498 aaatatatgacgttttggttttagtccttctaaaaatattttttttggttttagtccttgtaaatataaaa 32521568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 38873475 - 38873562
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||   ||||||||| || |||||||||||||| || |||||| |  | |||||||||||||| ||||||||||    
T  38873475 ttaaatatggaaatggtccctccaaatatctaacgttttggttttagtccctataaaaaaa--aatttggttttagtccttgcaaatata 38873562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 3e-40; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 20061799 - 20061902
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20061799 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttga 20061898  T
Q  142 tttt 145  Q
    ||||    
T  20061899 tttt 20061902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 28032029 - 28031926
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||     
T  28032029 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattttgg 28031930  T
Q  142 tttt 145  Q
    ||||    
T  28031929 tttt 28031926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 39027482 - 39027585
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||| ||||||||||||  | ||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  39027482 ttaaatgtgaaaatagtccccggaaatatctgacattttgcttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 39027581  T
Q  142 tttt 145  Q
    ||||    
T  39027582 tttt 39027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 50625152 - 50625045
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| |  | |||||||||||||||||||||||||||||    
T  50625152 ataggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaaaa--aatttggttttagtccctgcaaatataaaaa 50625055  T
Q  136 ttttgatttt 145  Q
     |||| ||||    
T  50625054 atttggtttt 50625045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 43191657 - 43191750
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||||||||||||| ||||  |||||||||||| ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  43191657 ttaaatatgaaaattgtccctgcaaatatctgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 43191750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 50096134 - 50096223
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  50096134 ttaaatatggaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatata 50096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 26244545 - 26244653
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    |||| ||||||||| |||| ||||  |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| ||      
T  26244545 taggcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggatttagtccctgcaaatatagaata 26244644  T
Q  137 tttgatttt 145  Q
    |||||||||    
T  26244645 tttgatttt 26244653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 37172249 - 37172352
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||||| ||||||||||||  ||||| ||||||||||| |||||||||||| |||||    
T  37172249 ttaaatatgaaaatagtctctgcaaatatctgtcattttggttttagtccctgtaaaaatatatttttgattttagtcccttcaaatataaaaaatttga 37172348  T
Q  142 tttt 145  Q
    ||||    
T  37172349 tttt 37172352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 42155131 - 42155029
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  42155131 ttaaatatgaaaatagtccctgtaaatatctgacattttggttttagatcctgtaaaaatatt-ttttggttttagtccctgcaaatataaaaaatttgg 42155033  T
Q  142 tttt 145  Q
    ||||    
T  42155032 tttt 42155029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 26244937 - 26244828
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||| |||||||||| |  ||||||||||||||||||||||||| || ||| ||||||||| ||||| |||||||||||||||||||| |||    
T  26244937 ataggcttaaatgtgaaaatagttcctgcaaatatctgacattttggttttaatccctgaaaaaatatttttttgattttagtccctgcaaatatagaaa 26244838  T
Q  136 ttttgatttt 145  Q
     |||| ||||    
T  26244837 atttggtttt 26244828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 33917 - 33836
Alignment:
Q  64 caaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| || ||| ||||||||||| |||| ||||    
T  33917 caaatatctgacattttggttttagtccctgtaaaaatatttttttggttttattctctgtaaatataaaaaatttggtttt 33836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 10914128 - 10914053
Alignment:
Q  70 tctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| || |||| ||||    
T  10914128 tctgacattttggttttagtccgtgtaaaaatatttttttggttttagtccctgcaaatataacaaatttggtttt 10914053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 39288148 - 39288247
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaaa 135  Q
    |||| |||||||||||||||||||   ||||||| |||||||||| |||||||| ||||||||||| || ||||| |||||||| |||||||||||||||    
T  39288148 taggcttaaatatgaaaatagtccctccaaatatatgacattttgattttagtctctgtaaaaatattttttttgattttagtcactgcaaatataaaaa 39288247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 47829347 - 47829251
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||||  ||||  || | || |||| |||||||||||||||||||||||||    
T  47829347 taggtttaaatatgaaaattgtccctgcaaatatctgacattttggttttagttcctgt--aatttttgtttttgttttagtccctgcaaatataaaaa 47829251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 50096515 - 50096412
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||| ||||||||||||  |||||||||||||||||||||||  |||  |||||||||| | ||||||||||||||||| |||||||| ||| ||||     
T  50096515 ttaaatgtgaaaatagtccctgcaaatatctgacattttggtttaggtccgtgtaaaaataattttttggttttagtccctacaaatatagaaaatttgg 50096416  T
Q  142 tttt 145  Q
    ||||    
T  50096415 tttt 50096412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 14602397 - 14602299
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||||| || |  || || | || |||| ||||||||||||||||||||||||    
T  14602397 aataggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccc--tataattttttttttagttttagtccctgcaaatataaaa 14602300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 20062180 - 20062091
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| | |||||||||||||| || |||||||||| ||| ||||||||||||||||||||||    
T  20062180 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatattttttgggttttagtccctgcaaatata 20062091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 14602006 - 14602100
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  ||||||||||| || |||||||||||||  | |||||||||| |||| |||||||||||||||||||||    
T  14602006 taggcttaaatatggaaatggtccctgcaaatatctggcactttggttttagtccatataaaaatatttttttagttttagtccctgcaaatata 14602100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 33553 - 33650
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||| ||||||||||| ||  |||  ||||||||||||| |||||||||||||| || |||||||||| || | ||||||||| ||||||||||||||    
T  33553 taggcttaaatatgaacatgatccctgcaaatatctgacgttttggttttagtccctataaaaatatttttctagttttagtctctgcaaatataaaa 33650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 12322093 - 12322182
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| |||   | ||||||||||| |||||||||||||| || |||||||||| ||||||| ||||||||| ||||||||    
T  12322093 ttaaatatgaaaatggtctctgtaaatatctgacgttttggttttagtccctataaaaatatttttttggtattagtccctacaaatata 12322182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 12322476 - 12322371
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgac-attttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaaatttt 139  Q
    |||||||||||||||||||  | ||||||||||| |||||||||||| || ||||||||||| || ||||| |||||||||||||||||  ||||| |||    
T  12322476 ttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaatattttttttgattttagtccctgcaaattaaaaaaattt 12322377  T
Q  140 gatttt 145  Q
    | ||||    
T  12322376 ggtttt 12322371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 28031641 - 28031737
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| ||||||||| |||| ||||  ||||||||||| | |||| |||||||||  | ||||| |||| ||||||||||||||||||||||||||    
T  28031641 aataggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccttataaaattatttttttggttttagtccctgcaaatata 28031737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 33619283 - 33619189
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  |||||||||||   |||||||||||||  || |||||||||| ||||||||||||||||| ||||||||    
T  33619283 taggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcctataaaaatatttttttggttttagtccctacaaatata 33619189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 18963610 - 18963699
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| || |||| ||||  ||||||||| | | |||||||||||||| || |||||||||| ||||||||||||||| ||||||||||    
T  18963610 ttaaatgtggaaatggtccctgcaaatatccggcgttttggttttagtccctataaaaatatttttttggttttagtccttgcaaatata 18963699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 43192038 - 43191949
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||| || ||||  | ||||||||| |||||||| ||||||  || |||||||||| ||||||||||||| ||||||||||||    
T  43192038 ttaaatatgaatatggtccatgtaaatatctggcattttggatttagttcctataaaaatatttttttggttttagttcctgcaaatata 43191949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 37172607 - 37172541
Alignment:
Q  65 aaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| | ||||| |||||||| || |||||||||| ||||||||||||||||||| ||||||    
T  37172607 aaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcgaatata 37172541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 50616935 - 50617029
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  ||||||||||| | | ||||||||||||  | || | ||||| ||||||||||||||||||||||||||    
T  50616935 taggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttatatatatatttttttggttttagtccctgcaaatata 50617029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 50624762 - 50624856
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  ||||||||||| | | ||||||||||||  | || | ||||| ||||||||||||||||||||||||||    
T  50624762 taggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttatatatatatttttttggttttagtccctgcaaatata 50624856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 10913810 - 10913864
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||| || || |||| ||||| ||||||||||||||||||||||||||    
T  10913810 ttttggttttaatccctataaagatatttttttggttttagtccctgcaaatata 10913864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 47828997 - 47829052
Alignment:
Q  75 cattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||| ||||||| || |||||||||| ||||| ||||||||||||||||||||    
T  47828997 cattttggatttagtccctataaaaatatttttttg-ttttagtccctgcaaatata 47829052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 51999499 - 51999542
Alignment:
Q  76 attttggttttagtcactgtaaaaatattattttggttttagtc 119  Q
    ||||||||||||||| ||||||||||||  ||||| ||||||||    
T  51999499 attttggttttagtccctgtaaaaatatatttttgattttagtc 51999542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 4e-39; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 9571784 - 9571675
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  9571784 ataggcttaaatatgaaaatagtccttgcaaatatctgacattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatgaaaa 9571685  T
Q  136 ttttgatttt 145  Q
     |||||||||    
T  9571684 atttgatttt 9571675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 8926571 - 8926468
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  8926571 ttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 8926472  T
Q  142 tttt 145  Q
    ||||    
T  8926471 tttt 8926468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 8936828 - 8936725
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  8936828 ttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 8936729  T
Q  142 tttt 145  Q
    ||||    
T  8936728 tttt 8936725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 19661351 - 19661453
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  19661351 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtttctgtaaaaatatt-ttttggttttagtccctgcaaatataaaaaatttga 19661449  T
Q  142 tttt 145  Q
    ||||    
T  19661450 tttt 19661453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 5404952 - 5404849
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||| ||||| |||||||||||||||||||||||| ||||     
T  5404952 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaatatttttttgattttagtccctgcaaatataaaaaatttgg 5404853  T
Q  142 tttt 145  Q
    ||||    
T  5404852 tttt 5404849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 5409277 - 5409174
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||| ||||| |||||||||||||||||||||||| ||||     
T  5409277 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaatatttttttgattttagtccctgcaaatataaaaaatttgg 5409178  T
Q  142 tttt 145  Q
    ||||    
T  5409177 tttt 5409174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 17238416 - 17238313
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||| ||||     
T  17238416 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaataattttttggttttagtccctgcaaatatagaaaatttgg 17238317  T
Q  142 tttt 145  Q
    ||||    
T  17238316 tttt 17238313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 26272362 - 26272259
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| || |||||||||  ||||||||||||| |||||||||||||||| |||||    
T  26272362 ttaaatatgaaaatagtccctgtaaatatctgacattttggttttagtccctataaaaatatatttttggttttagttcctgcaaatataaaaaatttga 26272263  T
Q  142 tttt 145  Q
    ||||    
T  26272262 tttt 26272259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 30608867 - 30608970
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||| ||| ||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  30608867 ttaaatatgaaaatagtccctgcaaatatttgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 30608966  T
Q  142 tttt 145  Q
    ||||    
T  30608967 tttt 30608970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 3485162 - 3485053
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||| ||||||||||||  |||||||| ||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||    
T  3485162 ataggcttaaatgtgaaaatagtccctgcaaatatgtgacattttggttttagtccctgcaaaaatatttttttgattttagtccctgcaaatataaaaa 3485063  T
Q  136 ttttgatttt 145  Q
     |||| ||||    
T  3485062 atttggtttt 3485053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 5924214 - 5924106
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattatttt-ggttttagtccctgcaaatataaaaat 136  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||| ||||  |||||||||||| ||||||||||||     
T  5924214 aggtttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaatatttttttatgttttagtccctacaaatataaaaaa 5924115  T
Q  137 tttgatttt 145  Q
    |||| ||||    
T  5924114 tttggtttt 5924106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 28853872 - 28853764
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    |||| ||||| |||||||||||||   ||||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||||     
T  28853872 taggcttaaacatgaaaatagtccctacaaatatctgacattttggttttagtccctataaaaatatttttttggttttagttcctgcaaatataaaaaa 28853773  T
Q  137 tttgatttt 145  Q
    |||| ||||    
T  28853772 tttggtttt 28853764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 3345021 - 3345124
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  ||| |||||||| |||||||||||||||  |||||||||||| |||| ||||||||||||||||||||||||| ||||     
T  3345021 ttaaatatgaaaatagtccctgcagatatctgatattttggttttagtccttgtaaaaatatttttttcgttttagtccctgcaaatataaaaaatttgg 3345120  T
Q  142 tttt 145  Q
    ||||    
T  3345121 tttt 3345124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 16525575 - 16525472
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||| |||   |||||||||||||||||||| |||||||  |||||||||||| |||| ||||||||||||| ||||||||||| ||||     
T  16525575 ttaaatatgaaaatcgtctccgcaaatatctgacattttggatttagtccttgtaaaaatattttttttgttttagtccctgtaaatataaaaaatttgg 16525476  T
Q  142 tttt 145  Q
    ||||    
T  16525475 tttt 16525472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 5140691 - 5140780
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||||||| ||  ||||||||| ||||| ||||||||||||||||||||    
T  5140691 ttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctacaaaaatatttttttgattttagtccctgcaaatata 5140780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 19661731 - 19661642
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||| ||||||||||| | |||||||||||||| || |||||||||| ||||| ||||||||||||||||||||    
T  19661731 ttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatata 19661642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 3345406 - 3345312
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  ||||||||||| | |||||||||||||| || |||||||||| ||||||||||||| |||| |||||||    
T  3345406 taggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagttcctgtaaatata 3345312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 3484784 - 3484874
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatata 131  Q
    ||||||||| ||||  |||  |||||||||| |||||||||||||||||  |||||||||| || ||||||||||||||||||||||||||    
T  3484784 ttaaatatggaaatgatccctgcaaatatctaacattttggttttagtctgtgtaaaaatattttttttggttttagtccctgcaaatata 3484874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 8926188 - 8926273
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    ||||||||| |||| |||   |||||||||| || |||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  8926188 ttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaa 8926273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 8936445 - 8936530
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    ||||||||| |||| |||   |||||||||| || |||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  8936445 ttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaa 8936530  T

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Target: chr6; HSP #21
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 30609248 - 30609159
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| ||||  |||||||||||   |||||||||||||| || |||||||||| ||| ||||||||||| ||||||||||    
T  30609248 ttaaatatgaaaatggtccctgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccatgcaaatata 30609159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 31717176 - 31717265
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  |||||||| |||| ||||||||||| || || |||||||||| ||||||||||||||| ||||||||||    
T  31717176 ttaaatatggaaatggtccctgcaaatatttgacgttttggttttaatccctataaaaatatttttttggttttagtccatgcaaatata 31717265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 33783397 - 33783501
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaaattttg 140  Q
    ||||||||||| |||||||  |||||||||||| |||||||||| | |  ||||||||||| || |||| |||||||||| |||||||||||||| ||||    
T  33783397 ttaaatatgaagatagtccctgcaaatatctgatattttggtttcaattcctgtaaaaatattttttttagttttagtccttgcaaatataaaaaatttg 33783496  T
Q  141 atttt 145  Q
     ||||    
T  33783497 gtttt 33783501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 5404596 - 5404679
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtcc 120  Q
    |||||||||||||| |||| ||||  ||||||||||| ||||||| |||||||| || |||||||||| |||||||||| ||||    
T  5404596 taggtttaaatatggaaatggtccctgcaaatatctggcattttgattttagtccctataaaaatatttttttggttttggtcc 5404679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 16525194 - 16525286
Alignment:
Q  39 ggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||||||||||| |||||||||  ||||||||||||| ||||| ||||| || ||   | ||| || |||||||||||||||||||||||||||||    
T  16525194 ggtttaaatatggaaatagtccctgcaaatatctgacgttttgcttttaatccct---ataatttttttttggttttagtccctgcaaatataaaa 16525286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 28853507 - 28853575
Alignment:
Q  64 caaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatata 131  Q
    ||||||| || | |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  28853507 caaatatttggcgttttggttttagtccctgtaaaaatattttttttggttttagtccctgcaaatata 28853575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 33783785 - 33783690
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattatttt-ggttttagtccctgcaaatata 131  Q
    |||||||||||||| ||||  |||  ||||||||||| | ||| |||||||||| |  |||||||||| |||| ||||||||||||||||||||||    
T  33783785 taggtttaaatatggaaatgatccctgcaaatatctggcgtttcggttttagtccccctaaaaatattttttttggttttagtccctgcaaatata 33783690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 5923827 - 5923913
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaa 127  Q
    ||||||||| |||| ||||  ||||||||||  | |||||||||||||| || |||||||| || ||||||||||||||||||||||    
T  5923827 ttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaatattttttttggttttagtccctgcaaa 5923913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 29819736 - 29819665
Alignment:
Q  74 acattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    ||||||||||||||||| | ||||||| ||| ||||| |||||||||  ||||||||||||| |||| ||||    
T  29819736 acattttggttttagtctcggtaaaaacatttttttgattttagtccaagcaaatataaaaaatttggtttt 29819665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 17238033 - 17238109
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagt 118  Q
    ||||||||| ||||  |||  |||||||||||| ||||||||||||||| ||| |||| | || |||||||||||||    
T  17238033 ttaaatatggaaatgatccctgcaaatatctgatattttggttttagtccctgcaaaattttttttttggttttagt 17238109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 31717494 - 31717454
Alignment:
Q  105 attttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    |||||||||||||||||||||||||||| || |||| ||||    
T  31717494 attttggttttagtccctgcaaatataacaaatttggtttt 31717454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 19129496 - 19129429
Alignment:
Q  63 gcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatat 130  Q
    |||||||| | || |||||||||||||| ||||||   |||| ||||| |||| ||||||||||||||    
T  19129496 gcaaatatgtcacgttttggttttagtccctgtaattttatttttttgtttttggtccctgcaaatat 19129429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 29819409 - 29819464
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtc 90  Q
    |||||| ||||||||| |||| ||||  ||||||||||| | ||||||||||||||    
T  29819409 aataggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtc 29819464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 31717519 - 31717480
Alignment:
Q  51 aaaatagtcctagcaaatatctgacattttggttttagtc 90  Q
    ||||||||||  |||||||||||| |||||||||||||||    
T  31717519 aaaatagtccctgcaaatatctgaaattttggttttagtc 31717480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 80; Significance: 7e-38; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 4364 - 4261
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  4364 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 4265  T
Q  142 tttt 145  Q
    ||||    
T  4264 tttt 4261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 3984 - 4087
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||| |||| ||||  ||||||||||| | |||||||||||||| || |||||||||| |||||||||||||||||| ||||||| ||| ||||     
T  3984 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaaaatttgg 4083  T
Q  142 tttt 145  Q
    ||||    
T  4084 tttt 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 7e-38; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 19158075 - 19157972
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||     
T  19158075 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattttgg 19157976  T
Q  142 tttt 145  Q
    ||||    
T  19157975 tttt 19157972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 20757474 - 20757371
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||     
T  20757474 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaattttgg 20757375  T
Q  142 tttt 145  Q
    ||||    
T  20757374 tttt 20757371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 24357 - 24450
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  24357 ttaaatatgaaaatagtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 24450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 40729445 - 40729352
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  40729445 ttaaatatgaaaatagtctttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 40729352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 42517249 - 42517146
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||| |||||||| |||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  42517249 ttaaatgtgaaaataatccccgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttga 42517150  T
Q  142 tttt 145  Q
    ||||    
T  42517149 tttt 42517146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 44483613 - 44483505
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    |||| |||||| ||||||||||||  |||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  44483613 taggcttaaatgtgaaaatagtccccgcaaatatttaacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaat 44483514  T
Q  137 tttgatttt 145  Q
    |||| ||||    
T  44483513 tttggtttt 44483505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 44219295 - 44219398
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||||| ||||     
T  44219295 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaatatttttttgtttttagtccctataaatataaaaaatttgg 44219394  T
Q  142 tttt 145  Q
    ||||    
T  44219395 tttt 44219398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 22364658 - 22364753
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||| ||||   ||| || |||||||||||||||||||||||||||||| ||||    
T  22364658 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgt---aatttttttttggttttagtccctgcaaatataaaaaatttg 22364753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 34595701 - 34595612
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| ||||  | ||||||||||| |||||||||||||| || |||||||||| |||||| |||||||||||||||||||    
T  34595701 ttaaatatgaaaatggtccctgtaaatatctgacgttttggttttagtccctataaaaatatttttttggctttagtccctgcaaatata 34595612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 42516868 - 42516957
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||||    
T  42516868 ttaaatatggaaatggtccctgcaaatatctggcattttggttttagttcctataaaaatatttttttggttttagtccctgcaaatata 42516957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 34595319 - 34595423
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgaca-ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||||||||||||||||  | |||||||||||| ||||||||||| || ||||||||||||| ||||| |||||||||||||||||  ||||| ||||    
T  34595319 ttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaatatttttttgattttagtccctgcaaattaaaaaaatttg 34595418  T
Q  141 atttt 145  Q
     ||||    
T  34595419 gtttt 34595423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 13426674 - 13426585
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||  ||| ||||  ||||||||||||| |||| ||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  13426674 ttaaatatgggaatggtccctgcaaatatctgacgttttagttttagtccctctaaaaatatttttttggttttagtccctgcaaatata 13426585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 22365033 - 22364944
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| || || ||||||||||  ||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||    
T  22365033 ttaaatatggaaatggttcttgcaaatatcttgcattttggttttagtctttataaaaatatttttttggttttagtccctgcaaatata 22364944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 35026825 - 35026733
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||||||||||||||||||  | |||||| ||||||||||||||||||   |||||||||||| |||||||||||||| ||| |||||||||||    
T  35026825 ttaaatatgaaaatagtccctgtaaatat-tgacattttggttttagttcatgtaaaaatatttttttggttttagtctctgtaaatataaaaa 35026733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 827099 - 827186
Alignment:
Q  42 ttaaatatg-aaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaat 128  Q
    ||||||||| ||||| ||||| ||||||||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||||||    
T  827099 ttaaatatggaaaatggtccttgcaaatatctgacattttgattctagtccctctaaaaatattttttgggttttagtccctgcaaat 827186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 829110 - 829197
Alignment:
Q  42 ttaaatatg-aaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaat 128  Q
    ||||||||| ||||| ||||| ||||||||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||||||    
T  829110 ttaaatatggaaaatggtccttgcaaatatctgacattttgattctagtccctctaaaaatattttttgggttttagtccctgcaaat 829197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 19476778 - 19476687
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgaca-ttttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatata 131  Q
    |||||||||||||||||||| |||||||||||| | |||| ||||||||  ||||||||||| || |||| |||||||||||||||||||||    
T  19476778 ttaaatatgaaaatagtccttgcaaatatctgatatttttagttttagttcctgtaaaaatatttttttttgttttagtccctgcaaatata 19476687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 830067 - 829960
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||| |||||| || ||||  || | || |||| |||| ||||||||||||||||||||    
T  830067 ataggcttaaatgtgaaaatagtccttgcaaatatctgacattttagttttaatccctgt--aattttttttttagtttcagtccctgcaaatataaaaa 829970  T
Q  136 ttttgatttt 145  Q
     |||| ||||    
T  829969 atttggtttt 829960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 1195247 - 1195140
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||| |||||| || ||||  || | || |||| |||| ||||||||||||||||||||    
T  1195247 ataggcttaaatgtgaaaatagtccttgcaaatatctgacattttagttttaatccctgt--aattttttttttagtttcagtccctgcaaatataaaaa 1195150  T
Q  136 ttttgatttt 145  Q
     |||| ||||    
T  1195149 atttggtttt 1195140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 44219676 - 44219591
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    ||||||||| |||||||||  ||||||||||  | ||||||||||| || || |||||||||| ||||||||||||||||||||||    
T  44219676 ttaaatatggaaatagtccctgcaaatatcttgcgttttggttttattccctataaaaatatttttttggttttagtccctgcaaa 44219591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 22954690 - 22954610
Alignment:
Q  65 aaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    ||||||||| |||||| |||||| || || |||||||||| |||||||||||||||||||||||||| ||  |||||||||    
T  22954690 aaatatctggcattttagttttaatctctataaaaatatttttttggttttagtccctgcaaatatagaatatttgatttt 22954610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 13426326 - 13426387
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatat 103  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||  ||||||||||||    
T  13426326 ttaaatatcaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaatat 13426387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 35026446 - 35026534
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||| ||||||| |||||||||||||| |||||||||| || |||| |||||||||| ||||||||||    
T  35026446 ttaaatatggaaatggtccctgcaaacatctgacgttttggttttagtccctgtaaaaat-ttttttttgttttagtccatgcaaatata 35026534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 31579814 - 31579710
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattatttt-ggttttagtccctgcaaatataaaaattttg 140  Q
    ||||||||  |||| ||||| |||||| |||  | ||||| |||||||| || |||||||||| |||| |||||||||||||||||||||||||  ||||    
T  31579814 ttaaatatagaaatggtccttgcaaatttctagcgttttgattttagtctctctaaaaatattttttttggttttagtccctgcaaatataaaatatttg 31579715  T
Q  141 atttt 145  Q
    |||||    
T  31579714 atttt 31579710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 44483233 - 44483320
Alignment:
Q  45 aatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatata 131  Q
    |||||| |||| ||||  ||||||||||||| |||||||||||||| || |||||||| || ||||| ||||| ||||||||||||||    
T  44483233 aatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaatattttttttgattttaatccctgcaaatata 44483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 34487143 - 34487232
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| || |  ||||||||||| | ||||||||||||    | |||||||||| |||||||||||||| |||||||||||    
T  34487143 ttaaatatgaaaatggttcctgcaaatatctgccgttttggttttagctcttataaaaatatttttttggttttagtctctgcaaatata 34487232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 19476386 - 19476485
Alignment:
Q  34 taataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata--ttattttggttttagtccctgcaaatata 131  Q
    ||||||| ||||||||| |||| ||||  || ||||| || | |||||||||||||| || ||||||||  || |||| |||||||||||||||||||||    
T  19476386 taataggcttaaatatggaaatggtccctgccaatatttggcgttttggttttagtccctataaaaatattttttttttgttttagtccctgcaaatata 19476485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 34487491 - 34487426
Alignment:
Q  76 attttggttttagtcactgtaaaaatattattttgg-ttttagtccctgcaaatataaaaattttg 140  Q
    ||||||||||||||| || |||||||||| |||| | ||||||||||| |||||||||||| ||||    
T  34487491 attttggttttagtccctataaaaatattttttttgattttagtccctccaaatataaaaaatttg 34487426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 44402996 - 44403048
Alignment:
Q  75 cattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    |||||||||||||||| |||||||||||  |||||| |||| |||||||||||    
T  44402996 cattttggttttagtccctgtaaaaataaaattttgtttttggtccctgcaaa 44403048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 1271561 - 1271508
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatat 130  Q
    |||||||||||||| |||||||| | || | ||| |||||||||||||||||||    
T  1271561 ttttggttttagtccctgtaaaacttttttgttgtttttagtccctgcaaatat 1271508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 31579498 - 31579535
Alignment:
Q  108 ttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  31579498 ttggttttagtccctgcaaatataaaaaaattgatttt 31579535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 39719389 - 39719441
Alignment:
Q  75 cattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    |||||||||||||||| ||||||||| |  |||||| |||| |||||||||||    
T  39719389 cattttggttttagtctctgtaaaaagaaaattttgtttttggtccctgcaaa 39719441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 7e-38; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 7e-38
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 17865358 - 17865255
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  17865358 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 17865259  T
Q  142 tttt 145  Q
    ||||    
T  17865258 tttt 17865255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 42239459 - 42239350
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgc--aaatataaaaa 135  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||  |||| ||||||    
T  42239459 aggtttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtctctgtaaaaatatttttttggttttagtccctgcaaaaatgtaaaaa 42239360  T
Q  136 ttttgatttt 145  Q
    ||||||||||    
T  42239359 ttttgatttt 42239350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 32592743 - 32592847
Alignment:
Q  41 tttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttg 140  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  32592743 tttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccttgtaaaaatatttttttggttttagtccctgcaaatataaaaattttg 32592842  T
Q  141 atttt 145  Q
     ||||    
T  32592843 gtttt 32592847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 37815724 - 37815620
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  37815724 ttaaatatgaaaattgtcccagcaaatatctgacattttggttttagtccctgtaaaaatattttttttggttttagtccctgcaaatataaaaaatttg 37815625  T
Q  141 atttt 145  Q
     ||||    
T  37815624 gtttt 37815620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 4712559 - 4712457
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| ||||     
T  4712559 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaatatt-ttttggttttagtccctgcaaatataaaaaatttgg 4712461  T
Q  142 tttt 145  Q
    ||||    
T  4712460 tttt 4712457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 17107813 - 17107711
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||  ||||    
T  17107813 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtca-tgtaaaaatatttttttgattttagtccctgcaaatataaaaaaattga 17107715  T
Q  142 tttt 145  Q
    ||||    
T  17107714 tttt 17107711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 26314477 - 26314570
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  26314477 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaactatttttttggttttagtccctgcaaatataaaaa 26314570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 12792564 - 12792676
Alignment:
Q  33 gtaataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataa 132  Q
    |||||||| |||||||| ||||||||  |  |||||||||| |||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  12792564 gtaataggcttaaatataaaaatagttatttcaaatatctgtcattttggttttagtccctgtaaaaatatttttttgattttagtccctgcaaatataa 12792663  T
Q  133 aaattttgatttt 145  Q
    ||| |||||||||    
T  12792664 aaaatttgatttt 12792676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 13492885 - 13492978
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||||| |||||    
T  13492885 ttaaatatgaaaatagtccctgcaaatatctgactttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaataaaaaaa 13492978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 39385176 - 39385281
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||||| |||||||||||||| ||||   ||||||| ||||||||||| |||| || ||||||||||||| |||||||||||||||||||||||||||||    
T  39385176 aataggcttaaatatgaaaatcgtccctccaaatatatgacattttggatttaatctctgtaaaaatatttttttggttttagtccctgcaaatataaaa 39385275  T
Q  135 attttg 140  Q
    | ||||    
T  39385276 aatttg 39385281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 16959764 - 16959868
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||| || |||||||| || ||||||||||||||| |||||||||||||| ||||    
T  16959764 ttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtccctataaaaatattttttttggttttagtccatgcaaatataaaaaatttg 16959863  T
Q  141 atttt 145  Q
     ||||    
T  16959864 gtttt 16959868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 989075 - 989170
Alignment:
Q  39 ggtttaaatatgaaaatagtcctagc-aaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||    
T  989075 ggtttaaatatgaaaatagtccctgccaaatatctgacattttggttttagtc-ctgtaaaaatatttttttggttttagt-cctgtaaatataaaaa 989170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 13682999 - 13683094
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||| ||||||||| ||||  |||  |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |||||||    
T  13682999 ataggcttaaatatggaaatgatccctgcaaatatctgacattttggttttagtccctataaaaatatttttttggttttagtccctgtaaatata 13683094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 989457 - 989368
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||||| |||||||||||||| || |||||||||| |||||||||||||||||||| |||||    
T  989457 ttaaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaatatttttttggttttagtccctgcagatata 989368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 16492028 - 16491936
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| || ||||||||||||| |||| ||||||| || ||||||||||||||    
T  16492028 ttaaatatgaaaatagtcactgcaaatatctgacattttggttttaatccctgtaaaaatatttttttagttttag-ccttgcaaatataaaaa 16491936  T

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Target: chr4; HSP #16
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 5720947 - 5721042
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| ||||||||| |||| ||||  ||||||||||| | |||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  5720947 aataggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatt-ttttggttttagtccctgcaaatata 5721042  T

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Target: chr4; HSP #17
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 11022060 - 11021952
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    ||||||||||||||||||| ||||  | | |||||||| ||||| |||||| ||  |||||||||||| ||||||||||||||| | ||||||||||||     
T  11022060 taggtttaaatatgaaaatggtccctgtacatatctgatattttcgttttaatccatgtaaaaatatttttttggttttagtccttacaaatataaaaaa 11021961  T
Q  137 tttgatttt 145  Q
    |||||||||    
T  11021960 tttgatttt 11021952  T

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Target: chr4; HSP #18
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 50 - 145
Target Start/End: Original strand, 46081435 - 46081529
Alignment:
Q  50 gaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    |||||||||||   ||||||||||||||||| ||||||||| || |||||||||| |||||||||| |||||||||||||| ||||||||| ||||    
T  46081435 gaaaatagtccctccaaatatctgacatttttgttttagtccctataaaaatatttttttggtttt-gtccctgcaaatatgaaaattttggtttt 46081529  T

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Target: chr4; HSP #19
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 22487606 - 22487499
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||  || | || ||||||||||||||| ||||||||| ||||    
T  22487606 ataggcttaaatatgaaaatagtccctgcaaatatttgacattttggttttagtccctgt--aattttttttttggttttagtccttgcaaatatgaaaa 22487509  T
Q  136 ttttgatttt 145  Q
     |||| ||||    
T  22487508 atttggtttt 22487499  T

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Target: chr4; HSP #20
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 13683372 - 13683303
Alignment:
Q  49 tgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagt 118  Q
    ||||||||||||  ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||    
T  13683372 tgaaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttggttttagt 13683303  T

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Target: chr4; HSP #21
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 26314857 - 26314768
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| ||||  |||| ||||||||||| | ||||||||||| || || |||||||||| ||||||||||||||||||||||||||    
T  26314857 ttaaatatggaaatgttcctggcaaatatctggcgttttggttttaatccctataaaaatatttttttggttttagtccctgcaaatata 26314768  T

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Target: chr4; HSP #22
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 11021674 - 11021766
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    |||||||||||||| ||||   |||||||||| | |||||||||||||| || |||||||||| ||||| |||| ||||||||||||||||||    
T  11021674 ttaaatatgaaaatggtccctacaaatatctggcgttttggttttagtccctataaaaatatttttttgattttggtccctgcaaatataaaa 11021766  T

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Target: chr4; HSP #23
Raw Score: 48; E-Value: 8e-19
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 9301950 - 9301848
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||| |||| |||| |||||||||||| | ||||| |||||||| || |||||||||| ||||||||||||||| |||||||||| ||  |||||    
T  9301950 ttaaatatggaaatggtcc-agcaaatatctggcgttttgattttagtctctataaaaatatttttttggttttagtccatgcaaatatagaatatttga 9301852  T
Q  142 tttt 145  Q
    ||||    
T  9301851 tttt 9301848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 16960151 - 16960061
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    |||| ||||||||| |||| ||||  ||||||||||  |||||||||||||||| || |||||||||| ||||||||||||||| ||||||    
T  16960151 taggcttaaatatggaaatggtccctgcaaatatcttgcattttggttttagtccctataaaaatatttttttggttttagtccttgcaaa 16960061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 16491648 - 16491737
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| ||||| | ||||||||| ||||||  |||||||  || |||||||||| ||||||||||| ||||||||||||||    
T  16491648 ttaaatatgaaaatggtccttgtaaatatctggcattttaattttagttcctataaaaatatttttttggttttaatccctgcaaatata 16491737  T

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Target: chr4; HSP #26
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 37815342 - 37815431
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  | ||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||| ||||||||||    
T  37815342 ttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatatttttttggttttagtccatgcaaatata 37815431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 43750327 - 43750226
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  ||||||||| | ||||||||||||||||| |||||   | || ||||  |||||||||||||||||||||||| ||||     
T  43750327 ttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtcattgtaat--ttttttttttattttagtccctgcaaatataaaaaatttgg 43750230  T
Q  142 tttt 145  Q
    ||||    
T  43750229 tttt 43750226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 2184774 - 2184687
Alignment:
Q  45 aatatgaaaatagtcctagcaaatatctgacattttggttttagtcac-tgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| |||| ||||  ||||||||||||| |||||||||||||  | | |||||||||| ||||||||||||||||||||||||||    
T  2184774 aatatggaaatggtccctgcaaatatctgacgttttggttttagtgtcctataaaaatatttttttggttttagtccctgcaaatata 2184687  T

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Target: chr4; HSP #29
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 17864943 - 17865026
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtcc 120  Q
    |||| ||||||||| |||| ||||| ||||||||||| | ||||||||||||||  | |||||||||| |||||||||||||||    
T  17864943 taggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccatataaaaatatttttttggttttagtcc 17865026  T

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Target: chr4; HSP #30
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 43749943 - 43750037
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  |||||||||||   ||||| |||||||  || |||||||||| ||||||||||||||||||||||||||    
T  43749943 taggcttaaatatggaaatggtccctgcaaatatctggtgttttgattttagttcctataaaaatatttttttggttttagtccctgcaaatata 43750037  T

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Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 17107433 - 17107522
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  | |||||| || | |||| ||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  17107433 ttaaatatggaaatggtccctgaaaatatttggcgttttagttttagtccctgttaaaatatttttttggttttagtccctgcaaatata 17107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 9301573 - 9301674
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||| ||||||||||| ||||||||||  ||||||| ||| |||| ||||||||||||| ||||  ||||||||||| |||| ||||||| ||||     
T  9301573 ttaaatataaaaatagtcct-gcaaatatctatcattttgattt-agtctctgtaaaaatatttttttaattttagtcccttcaaacataaaaaatttgg 9301670  T
Q  142 tttt 145  Q
    ||||    
T  9301671 tttt 9301674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 17865012 - 17865066
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||||||  | |||||||||| ||||||||||||||||||||||||||    
T  17865012 ttttggttttagtccatataaaaatatttttttggttttagtccctgcaaatata 17865066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 22487216 - 22487310
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  |||||||||||   ||||||||||||||  | |||||||||| ||||| |||||||| |||||||||||    
T  22487216 taggcttaaatatggaaatggtccccgcaaatatctggtgttttggttttagtccttataaaaatatttttttgtttttagtctctgcaaatata 22487310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 32593121 - 32593033
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| || | ||||||||||| |||||||||||||| ||  | |||||  ||| ||||||||||||||||||||||||||    
T  32593121 ttaaatatggaaatggttccagcaaatatcttacattttggttttaatccttataaaataatt-ttttggttttagtccctgcaaatata 32593033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 39385544 - 39385451
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatat--tattttggttttagtccctgcaaatataaaa 134  Q
    ||||||||| |||| ||||   |||||||||||| ||||| ||||| || || |||||||||  ||||||| |||||||||||||||||||||||    
T  39385544 ttaaatatggaaatggtccctacaaatatctgacgttttgcttttaatccctataaaaatatattattttg-ttttagtccctgcaaatataaaa 39385451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 46481305 - 46481251
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtc 90  Q
    ||||| |||||||||||||||||||  |||||||||| ||||||||| |||||||    
T  46481305 ataggcttaaatatgaaaatagtccctgcaaatatctaacattttggatttagtc 46481251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 2184425 - 2184473
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtc 90  Q
    |||||||||||||||| |   ||||||||||||||||||||||||||||    
T  2184425 ttaaatatgaaaatagcctctgcaaatatctgacattttggttttagtc 2184473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 46480947 - 46480995
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtc 90  Q
    |||||||||||||| ||||| ||||||||||| | ||||||||||||||    
T  46480947 ttaaatatgaaaatggtccttgcaaatatctggcgttttggttttagtc 46480995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 52017832 - 52017782
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    |||||||||||||| ||||||||| |  |||||| ||||||||||||||||    
T  52017832 ttttggttttagtccctgtaaaaagaaaattttgtttttagtccctgcaaa 52017782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 5279054 - 5278987
Alignment:
Q  64 caaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||  || |||| ||||||||| ||||||| ||||| || |||||||||||| || |||||||    
T  5279054 caaatatcatacgttttcgttttagtctctgtaaatatatttttatggttttagtccttgtaaatata 5278987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 14488151 - 14488096
Alignment:
Q  75 cattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatat 130  Q
    |||||||||||||||| ||||||||| | | | ||| |||| ||||||||||||||    
T  14488151 cattttggttttagtccctgtaaaaaaaatttgttgtttttggtccctgcaaatat 14488096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 4e-36; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 6944044 - 6943936
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||     
T  6944044 taggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaatatttttttggttttagtccctgcaaatatgaaaaa 6943945  T
Q  137 tttgatttt 145  Q
    |||||||||    
T  6943944 tttgatttt 6943936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 2835480 - 2835382
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  2835480 taggcttaaatatgaaaatagtccccgcaaatatctgacattttggttttagtcgctgtaaaaatatttttttgattttagtccctgcaaatataaaaa 2835382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 18764280 - 18764389
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||| ||||||||| ||||||| ||||||||||||    
T  18764280 ataggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccttgtaaaaatatttttttggtttgagtcccttcaaatataaaaa 18764379  T
Q  136 ttttgatttt 145  Q
     |||| ||||    
T  18764380 ctttggtttt 18764389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 3273102 - 3273009
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||||| || |||||||||| ||||| ||||||||||||||||||||||||    
T  3273102 ttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaatatttttttgattttagtccctgcaaatataaaaa 3273009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 13154621 - 13154528
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||||||||||||||||||   |||||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||||||    
T  13154621 ttaaatatgaaaatagtccctacaaatatctgacattttgattttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 13154528  T

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Target: chr8; HSP #6
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 9180427 - 9180324
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||||| ||| |||  ||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||| ||||     
T  9180427 ttaaatatgaatataatccctgcaaatatctgacattttggttttaatccctgtaaaaatattgttttggttttagtccttgcaaatataaaaaatttgg 9180328  T
Q  142 tttt 145  Q
    ||||    
T  9180327 tttt 9180324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 13405833 - 13405727
Alignment:
Q  39 ggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattt 138  Q
    ||||||||| ||||||||||    |||||||| |||||||||||||||| || ||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  13405833 ggtttaaatgtgaaaatagtttctgcaaatatttgacattttggttttaatccctgtaaaaatatttttttggttttagtcccttcaaatataaaaaatt 13405734  T
Q  139 tgatttt 145  Q
    || ||||    
T  13405733 tggtttt 13405727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 31402913 - 31403006
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattt-tggttttagtccctgcaaatataaaa 134  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||  |||||||||||| |||  |||||||||||||||||||||||||    
T  31402913 ttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccttgtaaaaatattttttggggttttagtccctgcaaatataaaa 31403006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 13154235 - 13154343
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    |||| ||||||||| |||| ||||  |||||||||||   |||||||||||||| || |||||||||| |||||||||||||||||||||||||| ||      
T  13154235 taggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaata 13154334  T
Q  137 tttgatttt 145  Q
    |||||||||    
T  13154335 tttgatttt 13154343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 26479327 - 26479429
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||| ||||||||||||  |||||||| ||||||||||||||||||| ||||||||| |  |  |||||||||||| ||||||||||||||||||||     
T  26479327 ttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaa-aaaaaattggttttagtcactgcaaatataaaaattttgg 26479425  T
Q  142 tttt 145  Q
    ||||    
T  26479426 tttt 26479429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 6892130 - 6892052
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtcc 120  Q
    ||||||||||||||| |||| | |||||||||||||||| ||||||||| ||||||||||||| |||||||||| ||||    
T  6892130 ttaaatatgaaaataatccttgtaaatatctgacattttagttttagtccctgtaaaaatatttttttggttttggtcc 6892052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 31186375 - 31186464
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| | |||||||||||||| || |||||||||| ||||| ||||||||||||||||||||    
T  31186375 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatata 31186464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 220509 - 220602
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  | ||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||    
T  220509 taggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatatt-ttttggttttagtccctgcaaatata 220602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 689664 - 689757
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  | ||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||    
T  689664 taggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatatt-ttttggttttagtccctgcaaatata 689757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 734132 - 734225
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  | ||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||    
T  734132 taggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatatt-ttttggttttagtccctgcaaatata 734225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 858028 - 858121
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  | ||||||||| |||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||    
T  858028 taggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatatt-ttttggttttagtccctgcaaatata 858121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 6943658 - 6943747
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  |||||||| || | |||||||||||||| || |||||||||| ||||| ||||||||||||||||||||    
T  6943658 ttaaatatggaaatggtccccgcaaatatttggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatata 6943747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 31186726 - 31186670
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaa 98  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  31186726 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaa 31186670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 24332642 - 24332541
Alignment:
Q  40 gtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaatttt 139  Q
    |||||||||||||||| ||||  |||||||||||||||||| ||||||||| ||||   ||| || |||| |||||||||||||| |||||||||| |||    
T  24332642 gtttaaatatgaaaattgtccctgcaaatatctgacattttagttttagtccctgt---aattttttttttgttttagtccctgc-aatataaaaaattt 24332547  T
Q  140 gatttt 145  Q
    | ||||    
T  24332546 ggtttt 24332541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 2835120 - 2835218
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaa 134  Q
    ||||| ||||||||| |||| |||   ||||||||||||  |||||||||||||  || |||||||||| |||||||||||||| ||| ||||||||||    
T  2835120 ataggcttaaatatggaaatggtctctgcaaatatctgatgttttggttttagtttctataaaaatatttttttggttttagtctctgtaaatataaaa 2835218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 24332262 - 24332352
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatata 131  Q
    ||||||||||||||  |||| | |||||| |||| ||||||||||| || || |||||||| || ||||||||||||||||||||||||||    
T  24332262 ttaaatatgaaaatgatccttgtaaatatatgacgttttggttttaatccctataaaaatattttttttggttttagtccctgcaaatata 24332352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 9180046 - 9180135
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| ||||  ||||||||||| | ||||| ||||| |  || |||||||||| ||||||||||||||| ||||||||||    
T  9180046 ttaaatatgaaaatggtccctgcaaatatctggcgttttgattttaattcctataaaaatatttttttggttttagtccatgcaaatata 9180135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 26479673 - 26479587
Alignment:
Q  45 aatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| |||| ||||  ||||||||||| | |||||||||||||| || |||||| |  | |||||||||||||||||||||||||    
T  26479673 aatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaaaaaaaatttggttttagtccctgcaaatata 26479587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 31403300 - 31403206
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  |||||||||||   |||||||||||||   | |||||||||| ||||||||||||||||| ||||||||    
T  31403300 taggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcttataaaaatatttttttggttttagtcccttcaaatata 31403206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 31686030 - 31685976
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtc 90  Q
    ||||| ||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  31686030 ataggcttaaatatgaatatagtccttacaaatatctgacattttggttttagtc 31685976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 13232236 - 13232289
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatat 130  Q
    |||||||||||||| ||||||||||||| | ||| |||||||||||||||||||    
T  13232236 ttttggttttagtccctgtaaaaatattttgttgtttttagtccctgcaaatat 13232289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 27993311 - 27993366
Alignment:
Q  75 cattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||    
T  27993311 cattttggttttagtccctgtaaaaatatt-ttttggttttagttcgtgcaaatata 27993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 28050613 - 28050668
Alignment:
Q  75 cattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||    
T  28050613 cattttggttttagtccctgtaaaaatatt-ttttggttttagttcgtgcaaatata 28050668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 31685692 - 31685760
Alignment:
Q  63 gcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||  | ||||||||||| || || |||||||||| ||||||||||||||| ||||||||||    
T  31685692 gcaaatatctagcgttttggttttaatccctataaaaatatttttttggttttagtccatgcaaatata 31685760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 13405442 - 13405538
Alignment:
Q  35 aataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| ||||||||| |||| ||||  |||||||||||  |||||| |||||||   | ||||||||||  ||||||||||| ||||| |||||||    
T  13405442 aataggcttaaatatgcaaatggtccctgcaaatatctggtattttgattttagtttttataaaaatatttgtttggttttagaccctgtaaatata 13405538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 31685990 - 31685950
Alignment:
Q  105 attttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  31685990 attttggttttagtccctgcaaatataaaaaatttggtttt 31685950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 6891780 - 6891868
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggtttt-agtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| | |||| ||||||||| ||  ||||||||| |||| ||||| ||||||||||||||||    
T  6891780 ttaaatatggaaatggtccctgcaaatatctggcgtttttgttttagtctct--aaaaatattttttttgtttttagtccctgcaaatata 6891868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 20112796 - 20112695
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||| ||||||||||||| |||||||| ||| |||| | ||||| ||  ||| |||||||  ||||||||||||| |||  ||||||||||| |||||    
T  20112796 ttaaatgtgaaaatagtcct-gcaaatat-tgaaatttcgattttaatccttgtgaaaatatatttttggttttagttcctctaaatataaaaaatttga 20112699  T
Q  142 tttt 145  Q
    ||||    
T  20112698 tttt 20112695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 10872953 - 10873003
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    |||||||||||||| ||||||||||| | | ||| ||||||||||||||||    
T  10872953 ttttggttttagtccctgtaaaaataatttgttgtttttagtccctgcaaa 10873003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 24934659 - 24934593
Alignment:
Q  65 aaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||  |||||||||||| ||||  |||||||||| | ||||||||| ||||| ||||||||||    
T  24934659 aaatatcaaacattttggtttaagtccatgtaaaaatacttttttggtttcagtccttgcaaatata 24934593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 37586067 - 37586109
Alignment:
Q  67 atatctgacattttggttttagtcactgtaaaaatattatttt 109  Q
    ||||||||||||||||||||||| | |||||||||||| ||||    
T  37586067 atatctgacattttggttttagttattgtaaaaatattttttt 37586109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 37586399 - 37586321
Alignment:
Q  41 tttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtc 119  Q
    |||||||||| |||| |||||  |||||||||| | ||||||||||| ||  | |||||||||  ||||||||||||||    
T  37586399 tttaaatatggaaatggtccttacaaatatctggcgttttggttttattctttataaaaatatatttttggttttagtc 37586321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 28346720 - 28346667
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatat 130  Q
    |||||||||||||| ||| ||||||||| | ||| |||| ||||||||||||||    
T  28346720 ttttggttttagtccctgcaaaaatattttgttgtttttggtccctgcaaatat 28346667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 3272750 - 3272829
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaa-tattattttggttttagtcc 120  Q
    ||||||||| ||||  |||  ||||||||||| | |||||||||||||| || |||||| |||| |||||||||| ||||    
T  3272750 ttaaatatgtaaatgatccctgcaaatatctggcgttttggttttagtccctataaaaattatttttttggttttggtcc 3272829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 4e-33; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 55092589 - 55092486
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||   |||||||||||||||||||||||| || ||||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  55092589 ttaaatatgaaaatagtccctccaaatatctgacattttggttttattctctgtaaaaatatttttttggttttagtctctgcaaatataaaaaatttga 55092490  T
Q  142 tttt 145  Q
    ||||    
T  55092489 tttt 55092486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 17109852 - 17109955
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||| |||||||||||||||| ||||     
T  17109852 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccttgtaaaaatatttttttggttttagtgcctgcaaatataaaaaatttgg 17109951  T
Q  142 tttt 145  Q
    ||||    
T  17109952 tttt 17109955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 46962583 - 46962686
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||| ||||     
T  46962583 ttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgtaaaaaaaattttttggttttagtccctgcaaatataaaaaatttgg 46962682  T
Q  142 tttt 145  Q
    ||||    
T  46962683 tttt 46962686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 49500225 - 49500122
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||     
T  49500225 ttaaatatgaaaatagtccctgcaaatatttgatattttggttttagtccctgtaaaaatatttttttggttttagtccttgcaaatataaaaaatttgg 49500126  T
Q  142 tttt 145  Q
    ||||    
T  49500125 tttt 49500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 50645854 - 50645751
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  | |||||||||||||||| ||||||||| || |||||||||| |||||||||||||||||||||||||||||| ||||     
T  50645854 ttaaatatgaaaatagtccctgtaaatatctgacattttagttttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatttgg 50645755  T
Q  142 tttt 145  Q
    ||||    
T  50645754 tttt 50645751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 4e-30
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 14545831 - 14545929
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||| |||| ||||| ||||||||||||||||||||||||    
T  14545831 taggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccatgtaaaagtatttttttgattttagtccctgcaaatataaaaa 14545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 32315371 - 32315480
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaa 135  Q
    ||||| |||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| |||||||||| |||    
T  32315371 ataggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctctgtaaaaatatttttttgattttagtccttgcaaatatagaaa 32315470  T
Q  136 ttttgatttt 145  Q
     |||| ||||    
T  32315471 atttggtttt 32315480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 29838295 - 29838398
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||| ||| ||||||||| |||| ||||||||| ||||||||||||||| ||||     
T  29838295 ttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgcaaaaatatttttttcgttttagtctctgcaaatataaaaaatttgg 29838394  T
Q  142 tttt 145  Q
    ||||    
T  29838395 tttt 29838398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 26582994 - 26582891
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||| |||| ||||  ||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||| ||  |||||    
T  26582994 ttaaatatggaaatggtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttgattttagtccctgcaaatatagaatatttga 26582895  T
Q  142 tttt 145  Q
    ||||    
T  26582894 tttt 26582891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 27934833 - 27934742
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaa 133  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||||| | ||||||||||| ||||| |||||||||||| |||||||||    
T  27934833 ttaaatatgaaaatagtccctgcaaatatctgacattctggttttagtcccagtaaaaatatttttttgattttagtccctgtaaatataaa 27934742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 38807920 - 38807817
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||| |||||||||  | ||||||||||||||||| |||||||| ||||||||||||   ||||||||||||||||||||||||||||| ||||     
T  38807920 ttaaatatggaaatagtccctgtaaatatctgacattttgattttagtccctgtaaaaatatatgtttggttttagtccctgcaaatataaaaaatttgg 38807821  T
Q  142 tttt 145  Q
    ||||    
T  38807820 tttt 38807817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 42093396 - 42093499
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||||||||||||    | ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||     
T  42093396 ttaaatatgaaaatagtctctcctaatatctgacattttggatttagtccctgtaaaaatatttttttggttttagtctctgcaaatataaaaaatttgg 42093495  T
Q  142 tttt 145  Q
    ||||    
T  42093496 tttt 42093499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 14546218 - 14546129
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||||||||    
T  14546218 ttaaatatggaaatggtccctgcaaatatctgacattttggtttcagtcactgtaaaaatattttttgagttttagtccctgcaaatata 14546129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 9e-22
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 52835927 - 52835824
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatat-tattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||||||||||||||||  ||||||||| | |||||||||||||||| |||||||||||| | ||||  |||||||||||||||||||||||| ||||    
T  52835927 ttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtc-ctgtaaaaatatatttttttattttagtccctgcaaatataaaaaatttg 52835829  T
Q  141 atttt 145  Q
     ||||    
T  52835828 gtttt 52835824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 16056344 - 16056438
Alignment:
Q  36 ataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||||||||| || | ||||  ||||||||||| | |||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  16056344 ataggtttaaatatggaattggtccctgcaaatatctggcgttttggttttagtccctataaaaatatt-ttttggttttagtccctgcaaatata 16056438  T

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Target: chr3; HSP #16
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 49499839 - 49499933
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||| |||||||||||   |||||||||||||| || |||||||||| ||| ||||||||||||||||||||||    
T  49499839 taggcttaaatatggaaatggtccttgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccctgcaaatata 49499933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 27284971 - 27285060
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| ||||||| |||||||  || |||||||||| ||||||||||||||||||||||||||    
T  27284971 ttaaatatggaaatggtccctgcaaatatctggcattttgattttagttcctataaaaatatttttttggttttagtccctgcaaatata 27285060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 27934452 - 27934541
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| | |||||||||||||| || |||||||||| ||||||||||||||||| ||||||||    
T  27934452 ttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagtcccttcaaatata 27934541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 38807535 - 38807628
Alignment:
Q  38 aggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||||||| ||||  | ||||||||| | |||||||||||| |  | |||||||||| ||||||||||||||||||||||||||    
T  38807535 aggtttaaatatgaaaatggtccctgtaaatatctggcgttttggttttagcccttataaaaatatttttttggttttagtccctgcaaatata 38807628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 52835546 - 52835635
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  ||||||||||| | ||||| |||||||| || |||||||||| ||||||||||||||||||||||||||    
T  52835546 ttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatata 52835635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 33162707 - 33162613
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  | ||||||||||| |||| ||||||||| || |||||||||| ||||||||||||||| ||||||||||    
T  33162707 taggcttaaatatggaaatggtccccgtaaatatctgacgttttagttttagtccctataaaaatatttttttggttttagtccttgcaaatata 33162613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 46962969 - 46962875
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||| ||||||||| |||| ||||  ||||||||||| | | |||||||||||| || |||||||||| ||||||||||| ||||||||||||||    
T  46962969 taggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccctataaaaatatttttttggttttaatccctgcaaatata 46962875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 32315757 - 32315669
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| || | ||||||||    
T  32315757 ttaaatatggaaatggtccctgcaaatatctgatattttggttttagtccctgtaaaaatatt-ttttggttttaggccatacaaatata 32315669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 26582621 - 26582716
Alignment:
Q  49 tgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    |||||||||||   |||||||||||| ||||||||||||||| ||||||||||||| | ||||| ||||| |||||||||||| ||| |||| ||||    
T  26582621 tgaaaatagtctccgcaaatatctgatattttggttttagtccctgtaaaaatattttgttggtgttagt-cctgcaaatatagaaaatttggtttt 26582716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 7029386 - 7029475
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| || |  ||||||||||| | |||| ||| ||||| || |||||||||| ||||||||||||||||||||||||||    
T  7029386 ttaaatatggaaatggttcctgcaaatatctggcgtttttgttctagtccctataaaaatatttttttggttttagtccctgcaaatata 7029475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 29838684 - 29838591
Alignment:
Q  34 taataggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    ||||||| ||||||||| |||| ||||  ||||||||||  | ||||||||||||||  | |||||||||| ||||||||||||||| ||||||    
T  29838684 taataggcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccatataaaaatatttttttggttttagtccttgcaaa 29838591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 49121716 - 49121809
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata-ttattttggttttagtccctgcaaatataaaa 134  Q
    ||||||||| |||| ||||  ||||||||||| ||||||| |||||| | || |||||||| || ||||||||||||||| |||||||||||||    
T  49121716 ttaaatatggaaatggtccctgcaaatatctggcattttgattttagcccctataaaaatactttttttggttttagtccatgcaaatataaaa 49121809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 21323273 - 21323181
Alignment:
Q  39 ggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||| |||| ||||  ||||||||||  | |||||||||||||| || ||||  | || ||||||||||||||||||||||||||    
T  21323273 ggtttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaatttttttttttggttttagtccctgcaaatata 21323181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 33162325 - 33162424
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||||||||||||||||  ||||||||||||||||||  |||||||| |||||||||    |  |||||||||||||||||||||  ||||| ||||     
T  33162325 ttaaatatgaaaatagtccccgcaaatatctgacatttt-attttagtctctgtaaaaa---aaaattggttttagtccctgcaaattaaaaaaatttgg 33162420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 50645473 - 50645558
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    ||||||||| |||| ||||  ||||||||||  | |||||||||||||  || |||||||||| ||||||||||||||| ||||||    
T  50645473 ttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagttcctataaaaatatttttttggttttagtccttgcaaa 50645558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 19590460 - 19590520
Alignment:
Q  63 gcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctg 123  Q
    ||||||||||||| ||||| |||||||| || |||||||||| |||| |||||||||||||    
T  19590460 gcaaatatctgacgttttgattttagtcgctataaaaatattttttttgttttagtccctg 19590520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 42093776 - 42093674
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||| |||| ||||  ||||||||||| | ||||| |||||||| || ||||| |||| ||||| ||||| |||||||||||||| ||  |||||    
T  42093776 ttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaa-tatttttttgtttttaatccctgcaaatatagaatatttga 42093678  T
Q  142 tttt 145  Q
    ||||    
T  42093677 tttt 42093674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 27285305 - 27285248
Alignment:
Q  87 agtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||| |||| ||||    
T  27285305 agtccctgtaaaaatatttttttg-ttttagtccctgcaaatataaaaagtttggtttt 27285248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 17109748 - 17109796
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtc 90  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||||||    
T  17109748 ttaaatatgaaaatagtccctgcaaatatctagcattttggttttagtc 17109796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 55092206 - 55092297
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaata--ttattttggttttagtccctgcaaatata 131  Q
    ||||||||||||||  |||  | ||||||||||| |||||||||||||| || ||||||||  || ||||  ||||||||| ||||||||||    
T  55092206 ttaaatatgaaaatgatccctgtaaatatctgacgttttggttttagtctctataaaaatattttttttttattttagtccgtgcaaatata 55092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 12673682 - 12673732
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaa 127  Q
    |||||||||||||| |||||||||||  |||||| |||| |||||||||||    
T  12673682 ttttggttttagtccctgtaaaaataaaattttgtttttggtccctgcaaa 12673732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 889164 - 889232
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttgatttt 145  Q
    ||||| ||||| || ||||||||||||  ||||||||||||| || | ||||||||||| |||| ||||    
T  889164 ttttgattttaatccctgtaaaaatatatttttggttttagttcccgtaaatataaaaaatttggtttt 889232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 70; Significance: 6e-32; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 70; E-Value: 6e-32
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 36763 - 36869
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||     
T  36763 taggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctg--aaaatatttttttggttttagtccctgcaaatataaaaaa 36860  T
Q  137 tttgatttt 145  Q
    |||| ||||    
T  36861 tttggtttt 36869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 37117 - 37039
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtcc 120  Q
    ||||||||| |||| ||||  ||||||||||  | |||||||||||||| || |||||||||| |||||||||| ||||    
T  37117 ttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaaaatatttttttggttttggtcc 37039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 69; Significance: 2e-31; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 212408 - 212516
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaat 136  Q
    |||| |||||||||||||||||||  ||||||||| |||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||  ||||||    
T  212408 taggcttaaatatgaaaatagtccccgcaaatatcagacattttggttttagtccctgtaaaaatatttttttggtttaagtccctgcaaattaaaaaat 212507  T
Q  137 tttgatttt 145  Q
    |||| ||||    
T  212508 tttggtttt 212516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 212794 - 212705
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  | ||||||||||  |||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  212794 ttaaatatggaaatggtccccgtaaatatctgatgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaatata 212705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 65; Significance: 6e-29; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 65; E-Value: 6e-29
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 8542 - 8646
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggtttt-agtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttg 140  Q
    |||||||||||||| ||||  |||||||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  8542 ttaaatatgaaaattgtccctgcaaatatctaacattttggtttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttg 8641  T
Q  141 atttt 145  Q
     ||||    
T  8642 gtttt 8646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 8889 - 8835
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||| ||||||| || |||||||||| |||| |||||||||||||||||||||    
T  8889 ttttggatttagtccctataaaaatattttttttgttttagtccctgcaaatata 8835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 64; Significance: 2e-28; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 43278 - 43381
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    |||||| ||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||||| ||||     
T  43278 ttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaatatattttttgttttagtccctgcaaatataaaaaatttgg 43377  T
Q  142 tttt 145  Q
    ||||    
T  43378 tttt 43381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 43660 - 43571
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| || || ||||||||||| | |||||||||||||  || ||||  | || ||||||||||||||||||||||||||    
T  43660 ttaaatatggaaatggttcttgcaaatatctggcgttttggttttagttcctataaatttttttttttggttttagtccctgcaaatata 43571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 60; Significance: 6e-26; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 118413 - 118311
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||||||||  |||| |||||||||||| ||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||     
T  118413 ttaaatatgaaaattatcct-gcaaatatctgatattttggttttcgtccctgtaaaaatatttttttggttttagtcactgcaaatataaaaaatttgg 118315  T
Q  142 tttt 145  Q
    ||||    
T  118314 tttt 118311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 118030 - 118119
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  | ||||||||| | |||||| ||||||| |  || ||||||| ||||||||||||||||||||||||||    
T  118030 ttaaatatggaaatggtccctgtaaatatctggcgttttggatttagtccccatataaatatttttttggttttagtccctgcaaatata 118119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 58; Significance: 9e-25; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 58; E-Value: 9e-25
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 74298 - 74198
Alignment:
Q  39 ggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattt 138  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||| ||||  |  ||||||||| |||||||||||||||||||||||||||||| ||    
T  74298 ggtttaaatatgaaaatagtccctgcaaatatctaacattttggttt-agtccttcaaaaaatatttttttggttttagtccctgcaaatataaaaaatt 74200  T
Q  139 tg 140  Q
    ||    
T  74199 tg 74198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 52; Significance: 3e-21; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 35995 - 36098
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaattttga 141  Q
    ||||||||||| ||||| |  |||||||||||||||||| |||||  ||  ||||| |||||| ||||||||||||||| |||||||||||||| |||||    
T  35995 ttaaatatgaatatagttcctgcaaatatctgacattttcgttttgatctttgtaagaatattgttttggttttagtccttgcaaatataaaaaatttga 36094  T
Q  142 tttt 145  Q
    ||||    
T  36095 tttt 36098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 36375 - 36287
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||| ||||||||||  ||||||||||||| |||| ||||||||| || ||||| |||| |||| |||||||| ||||||||||||    
T  36375 ttaaatataaaaatagtccctgcaaatatctgacgttttagttttagtccctataaaattatt-tttttgttttagttcctgcaaatata 36287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 50; Significance: 5e-20; HSPs: 3)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 25124 - 25213
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    |||||||||||||| |||| |  |||||| |||| |||||||||||||| || |||||||||| |||||||||||||||||| |||||||    
T  25124 ttaaatatgaaaatggtcccaataaatatttgacgttttggttttagtccctataaaaatatttttttggttttagtccctgtaaatata 25213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 25518 - 25432
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataa 132  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||||||    |||||||||||||||||| ||| ||||    
T  25518 ttaaatatgaaaatagtccccgcaaatatctgatattttggttttagtccctgtaaaaat----ttttggttttagtccctgtaaaaataa 25432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #3
Raw Score: 43; E-Value: 8e-16
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 25458 - 25397
Alignment:
Q  77 ttttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatataaaaatttt 139  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  25458 ttttggttttagtccctgtaaaaataattttttggttttagtccctgcaaat-taaaaatttt 25397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 42; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 4769 - 4680
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatattattttggttttagtccctgcaaatata 131  Q
    ||||||||| |||| ||||  |||||||| |||| |||||||||||||| || ||||  | || ||||||||||||||||||||||||||    
T  4769 ttaaatatggaaatggtccctgcaaatatttgacgttttggttttagtccctataaatttttttttttggttttagtccctgcaaatata 4680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 44050 - 43988
Alignment:
Q  42 ttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatatt 104  Q
    |||||||| ||||||||||  |||||||| ||||||||||||||||||| ||||||| |||||    
T  44050 ttaaatataaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaatatatt 43988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 43906 - 43973
Alignment:
Q  37 taggtttaaatatgaaaatagtcctagcaaatatctgacattttggttttagtcactgtaaaaatatt 104  Q
    |||| ||||||||| |||||||||  ||||||||||| | ||||||||||||||  | ||||||||||    
T  43906 taggcttaaatatggaaatagtcccggcaaatatctgtcgttttggttttagtccttataaaaatatt 43973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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