View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5709-19 (Length: 135)

Name: Solexa-NF5709-19
Description: NF5709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5709-19
Solexa-NF5709-19
[»] chr5 (43 HSPs)
chr5 (6-133)||(29201498-29201625)
chr5 (40-83)||(30217081-30217124)
chr5 (42-91)||(1084141-1084190)
chr5 (36-81)||(12975342-12975387)
chr5 (36-116)||(2568653-2568733)
chr5 (36-88)||(37588383-37588435)
chr5 (40-80)||(38047886-38047926)
chr5 (36-75)||(14295501-14295540)
chr5 (36-115)||(32172648-32172727)
chr5 (36-83)||(32408620-32408667)
chr5 (36-91)||(39105459-39105514)
chr5 (37-83)||(16889731-16889777)
chr5 (42-88)||(17258906-17258952)
chr5 (36-78)||(18543229-18543271)
chr5 (41-82)||(18875361-18875402)
chr5 (38-83)||(33533567-33533612)
chr5 (27-88)||(35553211-35553272)
chr5 (47-88)||(36774730-36774771)
chr5 (43-88)||(40205097-40205142)
chr5 (36-88)||(6183439-6183491)
chr5 (40-88)||(17368675-17368723)
chr5 (40-88)||(29844970-29845018)
chr5 (36-88)||(31030153-31030205)
chr5 (36-88)||(34975359-34975411)
chr5 (40-80)||(35550947-35550987)
chr5 (44-88)||(36638750-36638794)
chr5 (36-88)||(37526222-37526274)
chr5 (36-84)||(40335898-40335946)
chr5 (47-83)||(41052874-41052910)
chr5 (34-78)||(42646908-42646952)
chr5 (38-77)||(3951612-3951651)
chr5 (40-91)||(8481217-8481268)
chr5 (36-83)||(8651381-8651427)
chr5 (36-83)||(12425566-12425613)
chr5 (36-83)||(15003542-15003589)
chr5 (36-83)||(26005025-26005072)
chr5 (36-83)||(26390818-26390865)
chr5 (36-83)||(29054903-29054950)
chr5 (39-78)||(32942616-32942655)
chr5 (36-83)||(36542310-36542357)
chr5 (48-83)||(37611243-37611278)
chr5 (48-83)||(37787973-37788008)
chr5 (36-83)||(41957479-41957526)
[»] chr4 (26 HSPs)
chr4 (20-133)||(12650262-12650374)
chr4 (36-88)||(7694033-7694085)
chr4 (36-91)||(21157763-21157818)
chr4 (36-91)||(42866063-42866118)
chr4 (36-83)||(1028198-1028245)
chr4 (36-83)||(56480343-56480390)
chr4 (37-83)||(1706618-1706664)
chr4 (42-91)||(17975389-17975438)
chr4 (40-81)||(34398715-34398756)
chr4 (36-77)||(35958650-35958691)
chr4 (48-80)||(7730631-7730663)
chr4 (48-80)||(11262794-11262826)
chr4 (39-91)||(16200001-16200053)
chr4 (39-91)||(17822885-17822937)
chr4 (36-88)||(18628566-18628618)
chr4 (36-88)||(29263365-29263417)
chr4 (36-88)||(36048528-36048580)
chr4 (40-83)||(1137711-1137754)
chr4 (36-75)||(16494841-16494880)
chr4 (37-88)||(24929489-24929540)
chr4 (36-83)||(30581705-30581752)
chr4 (41-88)||(47800623-47800670)
chr4 (36-79)||(49893310-49893353)
chr4 (48-83)||(50742864-50742899)
chr4 (29-88)||(50800053-50800111)
chr4 (41-88)||(53673681-53673728)
[»] chr8 (38 HSPs)
chr8 (36-83)||(6509331-6509378)
chr8 (28-88)||(28769362-28769422)
chr8 (38-88)||(11183542-11183592)
chr8 (34-83)||(1433541-1433590)
chr8 (39-88)||(27028829-27028878)
chr8 (29-78)||(43393781-43393830)
chr8 (39-83)||(4558796-4558840)
chr8 (28-88)||(7918796-7918856)
chr8 (36-88)||(8062324-8062376)
chr8 (40-80)||(9912820-9912860)
chr8 (42-78)||(25097387-25097423)
chr8 (36-88)||(30013213-30013265)
chr8 (36-88)||(31705080-31705132)
chr8 (28-91)||(2093266-2093329)
chr8 (41-88)||(8060669-8060716)
chr8 (36-91)||(10075571-10075626)
chr8 (36-83)||(29973076-29973123)
chr8 (41-88)||(30277268-30277315)
chr8 (36-83)||(43709268-43709315)
chr8 (50-83)||(26479794-26479827)
chr8 (36-64)||(1470903-1470931)
chr8 (38-82)||(2342399-2342443)
chr8 (36-80)||(4763913-4763957)
chr8 (36-88)||(7645973-7646025)
chr8 (47-83)||(9836882-9836918)
chr8 (36-88)||(11795087-11795139)
chr8 (36-80)||(29592204-29592248)
chr8 (36-72)||(29592571-29592607)
chr8 (36-88)||(31862488-31862540)
chr8 (28-72)||(34770879-34770923)
chr8 (37-77)||(39551243-39551283)
chr8 (36-91)||(5227530-5227585)
chr8 (40-75)||(8578572-8578607)
chr8 (36-83)||(12361187-12361234)
chr8 (36-83)||(30627930-30627977)
chr8 (36-71)||(32841348-32841383)
chr8 (28-83)||(34551107-34551162)
chr8 (37-88)||(43504747-43504798)
[»] chr7 (32 HSPs)
chr7 (36-91)||(38010709-38010764)
chr7 (36-88)||(30812143-30812195)
chr7 (36-77)||(28340878-28340919)
chr7 (28-80)||(27548250-27548302)
chr7 (35-83)||(33645989-33646036)
chr7 (40-75)||(514766-514801)
chr7 (36-91)||(752964-753019)
chr7 (40-83)||(1350270-1350313)
chr7 (36-83)||(22759181-22759228)
chr7 (41-88)||(24363624-24363671)
chr7 (36-83)||(36370664-36370711)
chr7 (41-88)||(39334193-39334240)
chr7 (36-91)||(46056030-46056085)
chr7 (47-82)||(47354114-47354149)
chr7 (41-83)||(3968785-3968827)
chr7 (41-83)||(4966156-4966198)
chr7 (36-78)||(18350740-18350782)
chr7 (41-83)||(29363518-29363560)
chr7 (36-88)||(3610763-3610815)
chr7 (44-88)||(15321807-15321851)
chr7 (47-83)||(27378856-27378892)
chr7 (36-80)||(27517312-27517356)
chr7 (36-88)||(31771722-31771774)
chr7 (47-83)||(36060004-36060040)
chr7 (36-88)||(40689009-40689061)
chr7 (36-88)||(44151503-44151555)
chr7 (36-88)||(46104590-46104642)
chr7 (36-83)||(12110355-12110402)
chr7 (36-83)||(27481322-27481369)
chr7 (36-83)||(28165086-28165133)
chr7 (36-83)||(44821954-44822001)
chr7 (36-91)||(47177631-47177686)
[»] chr2 (35 HSPs)
chr2 (36-91)||(22681205-22681260)
chr2 (43-88)||(41817170-41817215)
chr2 (29-89)||(6167305-6167365)
chr2 (36-116)||(6993719-6993799)
chr2 (40-88)||(42419996-42420044)
chr2 (36-83)||(757450-757497)
chr2 (40-83)||(10884549-10884592)
chr2 (28-83)||(35099627-35099682)
chr2 (36-83)||(39983337-39983384)
chr2 (36-83)||(43141866-43141913)
chr2 (41-83)||(3049974-3050016)
chr2 (41-83)||(36852472-36852514)
chr2 (36-78)||(41170598-41170640)
chr2 (38-83)||(1939360-1939404)
chr2 (42-91)||(3078660-3078709)
chr2 (38-83)||(13736321-13736366)
chr2 (38-83)||(16867736-16867781)
chr2 (50-91)||(30552664-30552705)
chr2 (40-85)||(40435007-40435052)
chr2 (36-81)||(43199409-43199454)
chr2 (36-88)||(11513893-11513945)
chr2 (36-76)||(18066123-18066163)
chr2 (36-76)||(18179275-18179315)
chr2 (36-80)||(28803537-28803581)
chr2 (40-88)||(29316798-29316846)
chr2 (36-88)||(35485912-35485964)
chr2 (36-83)||(1742060-1742107)
chr2 (36-83)||(9477947-9477994)
chr2 (50-113)||(9530726-9530789)
chr2 (41-88)||(11488277-11488324)
chr2 (36-71)||(13869135-13869170)
chr2 (40-83)||(35486391-35486434)
chr2 (36-83)||(43205304-43205351)
chr2 (36-91)||(44238054-44238109)
chr2 (28-75)||(45067682-45067729)
[»] chr3 (21 HSPs)
chr3 (42-83)||(24158531-24158572)
chr3 (36-88)||(24887306-24887358)
chr3 (36-88)||(14548744-14548796)
chr3 (39-78)||(20502101-20502140)
chr3 (28-83)||(53891921-53891976)
chr3 (34-88)||(2719461-2719515)
chr3 (41-83)||(20669172-20669214)
chr3 (37-83)||(24280707-24280753)
chr3 (36-78)||(25964438-25964480)
chr3 (37-82)||(33965518-33965563)
chr3 (36-77)||(43875643-43875684)
chr3 (47-88)||(44284103-44284144)
chr3 (40-89)||(51510215-51510264)
chr3 (36-80)||(21872302-21872346)
chr3 (36-88)||(42733960-42734012)
chr3 (36-88)||(43115051-43115103)
chr3 (36-83)||(11253497-11253543)
chr3 (36-83)||(13709851-13709898)
chr3 (48-91)||(24785212-24785255)
chr3 (36-83)||(28622027-28622074)
chr3 (36-83)||(43875460-43875507)
[»] chr6 (20 HSPs)
chr6 (36-88)||(1275144-1275196)
chr6 (36-80)||(1401104-1401148)
chr6 (36-88)||(281871-281923)
chr6 (36-88)||(3168284-3168336)
chr6 (36-88)||(28088245-28088297)
chr6 (33-80)||(3525140-3525187)
chr6 (36-83)||(24838771-24838818)
chr6 (36-83)||(33787773-33787820)
chr6 (36-77)||(7149507-7149548)
chr6 (43-76)||(31686398-31686431)
chr6 (36-88)||(1402991-1403043)
chr6 (48-88)||(2205613-2205653)
chr6 (40-88)||(7945907-7945954)
chr6 (36-80)||(9041467-9041511)
chr6 (36-88)||(31671097-31671149)
chr6 (36-88)||(31812036-31812088)
chr6 (36-88)||(32171462-32171514)
chr6 (40-91)||(2117402-2117453)
chr6 (37-88)||(14492298-14492349)
chr6 (40-83)||(19275664-19275707)
[»] chr1 (35 HSPs)
chr1 (36-83)||(7218102-7218149)
chr1 (36-77)||(25005831-25005872)
chr1 (36-88)||(4700089-4700141)
chr1 (39-83)||(28938100-28938144)
chr1 (36-88)||(44422694-44422746)
chr1 (37-84)||(4549569-4549616)
chr1 (36-83)||(33976681-33976728)
chr1 (40-83)||(35017575-35017618)
chr1 (37-88)||(39347990-39348041)
chr1 (41-83)||(51929803-51929845)
chr1 (40-117)||(7136992-7137069)
chr1 (39-88)||(25479579-25479628)
chr1 (42-79)||(47598453-47598490)
chr1 (36-88)||(4549225-4549277)
chr1 (27-91)||(4622079-4622143)
chr1 (40-88)||(7472310-7472358)
chr1 (36-88)||(14629989-14630041)
chr1 (36-76)||(17269245-17269285)
chr1 (36-88)||(30257678-30257730)
chr1 (36-83)||(30259514-30259562)
chr1 (36-88)||(31517763-31517815)
chr1 (36-88)||(34290231-34290283)
chr1 (36-88)||(35590915-35590967)
chr1 (36-72)||(37272625-37272661)
chr1 (28-64)||(37295765-37295801)
chr1 (48-116)||(48748600-48748668)
chr1 (40-83)||(172838-172881)
chr1 (36-83)||(6279394-6279441)
chr1 (42-81)||(12593483-12593522)
chr1 (36-83)||(15515536-15515583)
chr1 (41-88)||(27140478-27140525)
chr1 (36-91)||(27738200-27738255)
chr1 (36-91)||(27887138-27887193)
chr1 (36-91)||(28482253-28482308)
chr1 (36-83)||(34179900-34179947)
[»] scaffold0110 (1 HSPs)
scaffold0110 (36-80)||(35826-35869)
[»] scaffold0091 (1 HSPs)
scaffold0091 (36-91)||(6947-7002)


Alignment Details
Target: chr5 (Bit Score: 124; Significance: 3e-64; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 3e-64
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 29201498 - 29201625
Alignment:
Q  6 caggttcattccccaatcaaacttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29201498 caggttcattccccaatcaaacttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaa 29201597  T
Q  106 atgtcataagcgttccccaacagtctca 133  Q
    ||||||||||||||||| ||||||||||    
T  29201598 atgtcataagcgttcccaaacagtctca 29201625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 30217081 - 30217124
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  30217081 ctataagctgctttcataagctatcctggagagcttatggaaat 30217124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 1084190 - 1084141
Alignment:
Q  42 ataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||||||||||| |||| || ||||||||||||||| |||||||    
T  1084190 ataagctgttttcataacatatcatgaagagcttatggaaataagctaaa 1084141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 12975342 - 12975387
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaa 81  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  12975342 taagctataagctgtgttcataagctatcttggagagcttatggaa 12975387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 2568653 - 2568733
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaaatgtcataagc 116  Q
    ||||||||||| ||||||||||| ||||| ||||||||| ||| |||| |||||||  | ||||||  | |||||||||||    
T  2568653 taagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagc 2568733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 37588435 - 37588383
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||||||| ||||    
T  37588435 taagctataagttgttttcataagttattctggagagcttatggaaataagct 37588383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 38047926 - 38047886
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  38047926 ctatatgctgttttcataagctatcctggagagcttatgga 38047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 14295501 - 14295540
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagctt 75  Q
    ||||||||||||||||||| ||| ||||||||||||||||    
T  14295501 taagctataagctgttttcgtaagctatcctggagagctt 14295540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 32172648 - 32172727
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaaatgtcataag 115  Q
    ||||||||||||||||||||||| ||||| || ||| || |||||||| |||| ||  || ||||| || ||||||||||    
T  32172648 taagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataag 32172727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 32408667 - 32408620
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||| || ||||||||| |||||||| |||||||||||||||    
T  32408667 taagctataaactattttcataagctatcctgaagagcttatggaaat 32408620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 39105459 - 39105514
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||| |||||||||||| ||||| |||||| |||||| |||| |||||||    
T  39105459 taagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaa 39105514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 16889731 - 16889777
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||||||| |||| || ||||| ||||||||||    
T  16889731 aagctataagctgttttcataagctatgctagagagtttatggaaat 16889777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 17258952 - 17258906
Alignment:
Q  42 ataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||| |||||||| |||||||||| |||| ||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagct 17258906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 18543271 - 18543229
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatg 78  Q
    |||| |||||| ||||||||||| |||||||||||||||||||    
T  18543271 taagatataagttgttttcataagctatcctggagagcttatg 18543229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 18875361 - 18875402
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaa 82  Q
    ||||||||||||| ||||  ||||||||||||||||||||||    
T  18875361 tataagctgttttaataagatatcctggagagcttatggaaa 18875402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 33533612 - 33533567
Alignment:
Q  38 agctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||| |||||||| || ||||| ||||||||||||||||||    
T  33533612 agctataaggtgttttcacaagctatcttggagagcttatggaaat 33533567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 35553272 - 35553211
Alignment:
Q  27 cttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||| | |||||||||| || ||||||||  |||| ||||||||||||||||||| ||||    
T  35553272 cttttcatataagctataaactattttcatacgctattctggagagcttatggaaataagct 35553211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 36774771 - 36774730
Alignment:
Q  47 ctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||| |||| |||||||||||||||||||||||| ||||    
T  36774771 ctgtttttataagctatcctggagagcttatggaaataagct 36774730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 40205142 - 40205097
Alignment:
Q  43 taagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||| ||||||||||| |||||||||||||||||| ||||| ||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagct 40205097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 6183439 - 6183491
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||| ||||||| || |  |||||||||||||||||| ||||    
T  6183439 taagctataagctgtattcataagctgttttggagagcttatggaaataagct 6183491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 17368675 - 17368723
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||| ||||||||||| ||||| ||||||| |||||||||| ||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagct 17368723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 29845018 - 29844970
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||| || | ||| |||||||||||||||||||| ||||    
T  29845018 ctataagctgtttttattagctaccctggagagcttatggaaataagct 29844970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 31030205 - 31030153
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||  |||||| ||| || ||||||||||||||||||||| ||||    
T  31030205 taagctataagtagttttcctaagctgtcctggagagcttatggaaataagct 31030153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 34975359 - 34975411
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||  ||||||| ||| ||||||||||||||| |||||||| ||||    
T  34975359 taagctataaattgttttcgtaagctatcctggagagctaatggaaataagct 34975411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 35550947 - 35550987
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatgga 80  Q
    |||||||||||||| ||||||||||||||||| || |||||    
T  35550947 ctataagctgtttttataacctatcctggagaactaatgga 35550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 36638750 - 36638794
Alignment:
Q  44 aagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||||  |||||| |||||||||||||||| ||||    
T  36638750 aagctgttttcataagttatcctagagagcttatggaaataagct 36638794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 37526274 - 37526222
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| |||||||||||  | | ||||||||||||||||||| ||||    
T  37526274 taagctataagttgttttcataagttgttctggagagcttatggaaataagct 37526222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 40335946 - 40335898
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaatt 84  Q
    |||| ||||||||| |||||||| ||||| |||| ||||||||||||||    
T  40335946 taagttataagctgctttcataagctatcttggaaagcttatggaaatt 40335898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 41052874 - 41052910
Alignment:
Q  47 ctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||  ||||||||||||||||||    
T  41052874 ctgttttcataacctattttggagagcttatggaaat 41052910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 42646908 - 42646952
Alignment:
Q  34 tttaagctataagctgttttcataacctatcctggagagcttatg 78  Q
    ||||||||||||| ||||||||||| | ||| |||||||||||||    
T  42646908 tttaagctataaggtgttttcataaacgatcttggagagcttatg 42646952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 3951612 - 3951651
Alignment:
Q  38 agctataagctgttttcataacctatcctggagagcttat 77  Q
    |||||||||||||||| |||| ||||||||||||| ||||    
T  3951612 agctataagctgtttttataagctatcctggagagattat 3951651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 8481217 - 8481268
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||||||||||||  |||| | ||| |||||||||||| |||||||    
T  8481217 ctataagctgttttcataagttatctttgagggcttatggaaataagctaaa 8481268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 8651427 - 8651381
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||| |||||||||||| |||| |||| ||||||||||||||    
T  8651427 taagctataaactgttttcataagctattctgg-gagcttatggaaat 8651381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 12425566 - 12425613
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||||| || ||||| |||||| |||||| ||||    
T  12425566 taagctataagctgttttcacaagctatcttggagaacttatgaaaat 12425613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 15003589 - 15003542
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||  |||||||||| ||||||  ||||||||||||||||    
T  15003589 taagctataagtggttttcataagctatccaagagagcttatggaaat 15003542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 26005072 - 26005025
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||  |||||||||||| ||| | ||||||||||||||||||    
T  26005072 taagctatatactgttttcataagctagcttggagagcttatggaaat 26005025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 26390865 - 26390818
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| || |||| |||  |||||||||||||||||||||||    
T  26390865 taagctataagatggtttcctaagttatcctggagagcttatggaaat 26390818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 29054903 - 29054950
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||| ||||| ||||| || |||||||||||||||    
T  29054903 taagctataagttgtttccataaactatcatgtagagcttatggaaat 29054950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 32942616 - 32942655
Alignment:
Q  39 gctataagctgttttcataacctatcctggagagcttatg 78  Q
    |||||||||||||||||||| ||||| |||||| ||||||    
T  32942616 gctataagctgttttcataagctatcttggagaacttatg 32942655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 36542357 - 36542310
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||| || ||||| ||||||| |||||||| |||||||    
T  36542357 taagctataagctgattccataagctatcctagagagcttgtggaaat 36542310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 37611278 - 37611243
Alignment:
Q  48 tgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||| ||||||||||||||||||    
T  37611278 tgttttcataagctatcttggagagcttatggaaat 37611243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 37788008 - 37787973
Alignment:
Q  48 tgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||| ||||||||||||||||||    
T  37788008 tgttttcataagctatcttggagagcttatggaaat 37787973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 41957526 - 41957479
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| |||||||||||||||||| ||||||| |||| |||||| ||||    
T  41957526 taagttataagctgttttcataagctatccttgagaacttatgaaaat 41957479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 5e-51; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 12650374 - 12650262
Alignment:
Q  20 aatcaaacttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaaatgtcataagcgtt 119  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12650374 aatcaaactttt-ttttaagctataagctgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaaatgtcataagcgtt 12650276  T
Q  120 ccccaacagtctca 133  Q
    ||| ||||||||||    
T  12650275 cccaaacagtctca 12650262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 7694085 - 7694033
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||| ||||    
T  7694085 taagctataagctgttttcataagttatcctggagagtttatggaaataagct 7694033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 21157763 - 21157818
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||| ||||||||||  |||||||| ||||||||||||||| |||||||    
T  21157763 taagctataagatgttttcatatgctatcctgaagagcttatggaaataagctaaa 21157818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 42866063 - 42866118
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||| | |||||||    
T  42866063 taagctataagttgttttcataagctatccttgagagcttatggaagtaagctaaa 42866118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 1028245 - 1028198
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||| ||||||||  |||||||||||||||| ||||||    
T  1028245 taagctataagctgctttcataagatatcctggagagcttaaggaaat 1028198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 56480343 - 56480390
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| |||||||||||||||||| ||||| ||||||||||||| ||||    
T  56480343 taagttataagctgttttcataaactatcttggagagcttatgaaaat 56480390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 1706618 - 1706664
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||||||| ||||| |||| |||||||| ||||    
T  1706618 aagctataagctgttttcataaactatcttggacagcttatgaaaat 1706664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 17975438 - 17975389
Alignment:
Q  42 ataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||||| |||| ||||| |||||||||| ||||||| |||||||    
T  17975438 ataagctgtttttataagctatcttggagagcttctggaaataagctaaa 17975389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 34398756 - 34398715
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaa 81  Q
    ||||||||||||||||||| | ||| ||||||||||||||||    
T  34398756 ctataagctgttttcataagccatcatggagagcttatggaa 34398715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 35958650 - 35958691
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttat 77  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||    
T  35958650 taagctagaagctgttttcataagctatcctggagagtttat 35958691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 7730631 - 7730663
Alignment:
Q  48 tgttttcataacctatcctggagagcttatgga 80  Q
    ||||||||||| |||||||||||||||||||||    
T  7730631 tgttttcataagctatcctggagagcttatgga 7730663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 11262826 - 11262794
Alignment:
Q  48 tgttttcataacctatcctggagagcttatgga 80  Q
    ||||||||||| |||||||||||||||||||||    
T  11262826 tgttttcataagctatcctggagagcttatgga 11262794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 16200053 - 16200001
Alignment:
Q  39 gctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||||||||||||| ||||| |||||  |||||| |||| |||||||    
T  16200053 gctataagctgttttcataagctatcttggaggacttatgaaaataagctaaa 16200001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 17822937 - 17822885
Alignment:
Q  39 gctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||| ||||||||||| ||||| |||||| |||||| |||| |||||||    
T  17822937 gctataagttgttttcataagctatcttggagaacttatgaaaataagctaaa 17822885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 18628618 - 18628566
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||| ||||| ||||||||||||  |||| |||||||||||||||||| ||||    
T  18628618 taagttataaactgttttcataagttatcttggagagcttatggaaataagct 18628566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 29263365 - 29263417
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||| ||||| ||||||||||| |||||||| ||||||| ||||||| ||||    
T  29263365 taagcgataagttgttttcataagctatcctgcagagcttgtggaaataagct 29263417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 36048528 - 36048580
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||| |||||| || ||||| | |||||||||||||||| ||||    
T  36048528 taagctataagctattttcaaaagctatcttagagagcttatggaaataagct 36048580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 1137711 - 1137754
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||| |||||||| ||||||  ||||||||||||||||    
T  1137711 ctataagctgctttcataaactatccaagagagcttatggaaat 1137754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 16494880 - 16494841
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagctt 75  Q
    ||||||||||| ||||||||||| ||||| ||||||||||    
T  16494880 taagctataagttgttttcataagctatcttggagagctt 16494841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 24929489 - 24929540
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||| ||||||||||| || | || |||||||||||||||| ||||    
T  24929489 aagctataagttgttttcataaactctactagagagcttatggaaataagct 24929540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 30581752 - 30581705
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||| ||||  |||| ||||||| ||||||||||    
T  30581752 taagctataagctgttttaataagttatcttggagagtttatggaaat 30581705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 47800623 - 47800670
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||||||| ||||| || |||||||||| |||| ||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaataagct 47800670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 49893310 - 49893353
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgg 79  Q
    |||| |||||||||||||| ||| ||||||| ||||||||||||    
T  49893310 taagttataagctgttttcgtaagctatccttgagagcttatgg 49893353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 50742899 - 50742864
Alignment:
Q  48 tgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||||||||||||||||| ||||    
T  50742899 tgttttcataagctatcctggagagcttatgaaaat 50742864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 50800111 - 50800053
Alignment:
Q  29 tttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||| ||||||||||||||||||| ||| ||||| |||||| ||| ||||||| ||||    
T  50800111 tttcttataagctataagctgttttcttaagctatcatggagaactt-tggaaataagct 50800053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 53673728 - 53673681
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||| |||||||||||| ||||| ||||||||||||| |||| ||||    
T  53673728 tataaactgttttcataagctatcttggagagcttatgtaaataagct 53673681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 6509378 - 6509331
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  6509378 taagctataagctgttttcataagctatcctggagagcttattgaaat 6509331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 28769422 - 28769362
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||| ||||||||||||||||||||||| ||||  ||||||| |||||||||| ||||    
T  28769422 ttttcttataagctataagctgttttcataagctattttggagagtttatggaaataagct 28769362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 11183542 - 11183592
Alignment:
Q  38 agctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||||||| || ||| |||||||||||||||||||| ||||    
T  11183542 agctataagctgttttcacaagctaccctggagagcttatggaaataagct 11183592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 1433541 - 1433590
Alignment:
Q  34 tttaagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||| ||||    
T  1433541 tttaagctttaagcagttttcataagctatcctggagagcttatgaaaat 1433590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 27028829 - 27028878
Alignment:
Q  39 gctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||| ||||    
T  27028829 gctataagctgttttcataagctatcttggagagcttatgaaaataagct 27028878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 43393830 - 43393781
Alignment:
Q  29 tttcttttaagctataagctgttttcataacctatcctggagagcttatg 78  Q
    |||||||||||||||||||| ||||||||| ||||  |||||||||||||    
T  43393830 tttcttttaagctataagcttttttcataagctattatggagagcttatg 43393781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 4558796 - 4558840
Alignment:
Q  39 gctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||    
T  4558796 gctataagctgtttccataagctatcctagagagcttatggaaat 4558840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 7918856 - 7918796
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||| ||||||||||| ||||||||||| ||||| || ||||||| ||||||| ||||    
T  7918856 ttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataagct 7918796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 8062324 - 8062376
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||||||| ||||| | ||||| |||||||||| ||||    
T  8062324 taagctataagctgttttcataagctatcttagagagattatggaaataagct 8062376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 9912860 - 9912820
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  9912860 ctataagctgttttcctaagctatcctggagagcttatgga 9912820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 25097387 - 25097423
Alignment:
Q  42 ataagctgttttcataacctatcctggagagcttatg 78  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25097387 ataagctgttttcataagctatcctggagagcttatg 25097423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30013213 - 30013265
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||||||| |||||||| ||| || |||||||| ||||    
T  30013213 taagctataagctgttttcataagctatcctgtagaactaatggaaataagct 30013265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 31705080 - 31705132
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||||||| || |||| ||||| |||||||||| ||||    
T  31705080 taagctataagctgttttcataagctgtccttgagagtttatggaaataagct 31705132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 2093266 - 2093329
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||||||||||| ||||||||| | |||||||| || | |||| ||||| |||||||    
T  2093266 ttttcttttaagctataagttgttttcattagctatcctgaagcgtttatagaaataagctaaa 2093329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 8060669 - 8060716
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||||||| | ||||| |||||||||||||||| ||||    
T  8060669 tataagctgttttcataagcaatcctagagagcttatggaaataagct 8060716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 10075626 - 10075571
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||| |||||||| ||||||||| ||||||| ||||||||||| |||| |||||||    
T  10075626 taagttataagctattttcataagctatcctagagagcttatgaaaataagctaaa 10075571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 29973076 - 29973123
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||||||||| ||||||| ||||| ||||||||||    
T  29973076 taagctataagttgttttcataagctatccttgagagtttatggaaat 29973123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 30277315 - 30277268
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||||||| ||||||| ||||| |||||||||| ||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagct 30277268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 43709268 - 43709315
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  43709268 taagctataagttgttttcatgagctatcctggagagcttatgaaaat 43709315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 26479794 - 26479827
Alignment:
Q  50 ttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||| |||||||||||||||||||    
T  26479794 ttttcataacctattctggagagcttatggaaat 26479827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 1470931 - 1470903
Alignment:
Q  36 taagctataagctgttttcataacctatc 64  Q
    |||||||||||||||||||||||||||||    
T  1470931 taagctataagctgttttcataacctatc 1470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 2342443 - 2342399
Alignment:
Q  38 agctataagctgttttcataacctatcctggagagcttatggaaa 82  Q
    ||||||||| ||||||||||| ||||||| || ||||||||||||    
T  2342443 agctataagttgttttcataagctatcctcgaaagcttatggaaa 2342399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 4763913 - 4763957
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||||||||||||||||  ||| |||||||| ||||||||||||    
T  4763913 taagctataagctgtttttctaagctatcctgaagagcttatgga 4763957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 7645973 - 7646025
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| ||||||||||| ||| |||| | ||||||||||||| ||||    
T  7645973 taagctataagttgttttcataagctaacctgtaaagcttatggaaataagct 7646025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 9836918 - 9836882
Alignment:
Q  47 ctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  9836918 ctgttttcataagctatcttggagagcttatggaaat 9836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 11795087 - 11795139
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||| ||||||||| |||||||| ||||  |||||||||||||||||| ||||    
T  11795087 taagttataagctgatttcataagctattatggagagcttatggaaataagct 11795139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 29592248 - 29592204
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    |||||||||| |||||||||||| ||||||  |||||||||||||    
T  29592248 taagctataatctgttttcataagctatcccagagagcttatgga 29592204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 29592607 - 29592571
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagag 72  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  29592607 taagctataagctgttttcgtaagctatcctggagag 29592571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 31862488 - 31862540
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| |||||||||||  |||||| ||||||||||| |||| ||||    
T  31862488 taagctataagatgttttcataagttatcctagagagcttatgaaaataagct 31862540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 34770879 - 34770923
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagag 72  Q
    ||||| ||||||||||||| ||||||||||| ||||||| |||||    
T  34770879 ttttcatttaagctataagttgttttcataagctatcctagagag 34770923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 39551283 - 39551243
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttat 77  Q
    |||||||||| ||||||||||| || |||||||||||||||    
T  39551283 aagctataagttgttttcataagctttcctggagagcttat 39551243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 5227530 - 5227585
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||||||||||  ||| ||||| || |||||||||| |||| |||||||    
T  5227530 taagctataagctgtttttgtaagctatcatgaagagcttatgaaaataagctaaa 5227585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 75
Target Start/End: Original strand, 8578572 - 8578607
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagctt 75  Q
    ||||||||||||||||||| |||||| |||||||||    
T  8578572 ctataagctgttttcataagctatcccggagagctt 8578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 12361187 - 12361234
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||||||||  ||| | |||||||| ||||||||    
T  12361187 taagctataagctgttttcataagttattcaggagagctaatggaaat 12361234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 30627977 - 30627930
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| |||||||||||  |||| | ||||||||||||||||    
T  30627977 taagctataagttgttttcataagttatcttagagagcttatggaaat 30627930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 32841383 - 32841348
Alignment:
Q  36 taagctataagctgttttcataacctatcctggaga 71  Q
    ||||||||||||||||||||||| ||||| ||||||    
T  32841383 taagctataagctgttttcataagctatcttggaga 32841348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 34551107 - 34551162
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||| |||||| |||||| ||||||| |||  |||||||||||||||||| ||||    
T  34551107 ttttcatttaagttataagttgttttcttaagttatcctggagagcttatgaaaat 34551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 43504747 - 43504798
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||| |||||| |||| ||||| |||||| ||||||||||| ||||    
T  43504747 aagctataagatgtttttataagctatcttggagaacttatggaaataagct 43504798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 38010709 - 38010764
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  38010709 taagctataagctgttttcataatctatcctagagaacttatggaaataagctaaa 38010764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30812143 - 30812195
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||| ||||    
T  30812143 taagctataagctgttttcattagctatcatggagagcttatggaaataagct 30812195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 28340919 - 28340878
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttat 77  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  28340919 taagctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 27548250 - 27548302
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| | ||||||||    
T  27548250 ttttcatttaagctataagctgttttcataagctatcttggataacttatgga 27548302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 33646036 - 33645989
Alignment:
Q  35 ttaagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  33646036 ttaagctataaactgttttcataagctat-ctggagagcttatggaaat 33645989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 75
Target Start/End: Original strand, 514766 - 514801
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagctt 75  Q
    ||||||||||||||||||| ||||||||||||||||    
T  514766 ctataagctgttttcataagctatcctggagagctt 514801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 752964 - 753019
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||||||||||| |||| ||||| ||| |||| |||| ||||||||||||    
T  752964 taagctataagctgttttgataaactatcttggggagcatatgaaaattagctaaa 753019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 1350313 - 1350270
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||    
T  1350313 ctataagctgttttcataaactatcctgaagagcttatgaaaat 1350270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 22759181 - 22759228
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||| |||||| |||||||| |||||| |||||||||||||||||    
T  22759181 taagctaaaagctgatttcataagctatccaggagagcttatggaaat 22759228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 24363671 - 24363624
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||| ||||||||||| ||||||||||||| |||||||||| ||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagct 24363624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 36370664 - 36370711
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||| ||||| |||||||| |||||||||||||||    
T  36370664 taagctataagttgtttccataaactatcctgaagagcttatggaaat 36370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 39334193 - 39334240
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||| || ||||||||| |||||||||||||| ||||    
T  39334193 tataagctgttttcaaaagctatcctggcgagcttatggaaataagct 39334240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 46056085 - 46056030
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||  ||||||||||| |||||| | ||||||||||||||| |||||||    
T  46056085 taagctataaattgttttcataagctatcccgtagagcttatggaaataagctaaa 46056030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 47354114 - 47354149
Alignment:
Q  47 ctgttttcataacctatcctggagagcttatggaaa 82  Q
    |||||||||||||||||||| |||||||||||||||    
T  47354114 ctgttttcataacctatcctagagagcttatggaaa 47354149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 3968827 - 3968785
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||    
T  3968827 tataagctattttcataagctatcctggagagtttatggaaat 3968785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 4966156 - 4966198
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||| | |||||| |||||||||||||||    
T  4966156 tataagctgttttcataagccatcctgaagagcttatggaaat 4966198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 18350782 - 18350740
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatg 78  Q
    |||| |||||||||||||||||| ||||| |||||||||||||    
T  18350782 taagttataagctgttttcataagctatcatggagagcttatg 18350740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 29363518 - 29363560
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||||  |||||||||||||||||||||||    
T  29363518 tataagctgttatcataagttatcctggagagcttatggaaat 29363560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 3610815 - 3610763
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| ||||||| ||| ||||||| |||||||||| ||||| ||||    
T  3610815 taagctataagttgttttcgtaaactatcctagagagcttatagaaataagct 3610763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 15321851 - 15321807
Alignment:
Q  44 aagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||| |||||||| | ||||||||||||| ||||    
T  15321851 aagctgttttcataagctatcctgaaaagcttatggaaataagct 15321807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 27378892 - 27378856
Alignment:
Q  47 ctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  27378892 ctgttttcataaactatcctggagagcttatgaaaat 27378856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 27517356 - 27517312
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||||| || ||||||||||||  ||||||||||||||||||||    
T  27517356 taagctacaaactgttttcataagttatcctggagagcttatgga 27517312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 31771722 - 31771774
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||||||   |||| ||||| |||||||||||| ||||    
T  31771722 taagctataagctgttttcatatgttatcgtggagtgcttatggaaataagct 31771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 36060004 - 36060040
Alignment:
Q  47 ctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||| |||||||||| |||||||||||||    
T  36060004 ctgttttcataagctatcctggatagcttatggaaat 36060040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 40689061 - 40689009
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||| ||||||| |||||||||| | |||||| |||| ||||    
T  40689061 taagctataagctgtgttcataagctatcctggataacttatgaaaataagct 40689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 44151555 - 44151503
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| ||||||||||| ||||| || | ||||||||||||| ||||    
T  44151555 taagctataagttgttttcataaactatcttgaaaagcttatggaaataagct 44151503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 46104642 - 46104590
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| ||||||||||| |||| ||| |||||||||| |||| ||||    
T  46104642 taagctataagttgttttcataagctatgctgaagagcttatgaaaataagct 46104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 12110355 - 12110402
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||||||||| ||||| || ||| |||||| ||||    
T  12110355 taagctataagctgttttcataagctatcttgaagaacttatgaaaat 12110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 27481369 - 27481322
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| | ||||||||| ||||| |||| |||||||||||||    
T  27481369 taagctataagttattttcataagctatcatggatagcttatggaaat 27481322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 28165086 - 28165133
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||| |||| || |||| ||||| ||||||||||||||||||    
T  28165086 taagctataaactgtctttataagctatcatggagagcttatggaaat 28165133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 44821954 - 44822001
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| |||||||||||||||||| |||| ||||||| |||||| ||||    
T  44821954 taagttataagctgttttcataagctattctggagaacttatgaaaat 44822001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 47177631 - 47177686
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||||||||||||| || ||||| ||||||  ||||| |||| |||||||    
T  47177631 taagctataagctgttttcaaaagctatcttggagaatttatgaaaataagctaaa 47177686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000005; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 22681260 - 22681205
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  22681260 taagctataagctgttttcataatctatcctagagaacttatggaaataagctaaa 22681205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 41817170 - 41817215
Alignment:
Q  43 taagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||||    
T  41817170 taagctattttcataaactatcctggagagcttatggaaataagct 41817215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 6167365 - 6167305
Alignment:
Q  29 tttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagcta 89  Q
    |||| |||||||||||||||||||| |||| ||||  |||||| ||||||||||| |||||    
T  6167365 tttcgtttaagctataagctgtttttataagctattttggagaacttatggaaataagcta 6167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 6993799 - 6993719
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaaatgtcataagc 116  Q
    ||||||||| | ||||||||||| |||| || ||||||||||| |||| |||||||  |||||||| || ||| |||||||    
T  6993799 taagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaatgacttatggacatgccataagc 6993719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 42419996 - 42420044
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| ||||    
T  42419996 ctataagctattttcataagctatcctggatagcttatggaaatgagct 42420044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 757450 - 757497
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| |||||||| ||  |||||||||||||||||||||||    
T  757450 taagctataagatgttttcaaaaattatcctggagagcttatggaaat 757497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 10884592 - 10884549
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  10884592 ctataagctgttttcataagctatcctagagagcttatgaaaat 10884549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 35099682 - 35099627
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||| || ||| ||||||||| |||||||| ||||||| ||||||||||||||||    
T  35099682 ttttcattaaagttataagctgctttcataagctatccttgagagcttatggaaat 35099627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 39983337 - 39983384
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||| ||||    
T  39983337 taagctataagttgttttcataagctatcctggagagctaatgaaaat 39983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 43141866 - 43141913
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| ||||||||||| |||||||| |||| ||||||||||    
T  43141866 taagctataagatgttttcataagctatcctgaagagtttatggaaat 43141913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 3049974 - 3050016
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||    
T  3049974 tataagctgttttcataagctatcatggagagcttatgaaaat 3050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 36852472 - 36852514
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||    
T  36852472 tataaactgttttcataagctatcttggagagcttatggaaat 36852514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 41170598 - 41170640
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatg 78  Q
    ||||||||||||||||||||||  ||||| |||||||||||||    
T  41170598 taagctataagctgttttcatatgctatcatggagagcttatg 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 1939404 - 1939360
Alignment:
Q  38 agctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||    
T  1939404 agctataa-ctgttttcataagctatactggagagcttatggaaat 1939360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 3078709 - 3078660
Alignment:
Q  42 ataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||||| |||| ||||| |||||||||| ||||||| |||||||    
T  3078709 ataagctgtttttataagctatcttggagagcttctggaaataagctaaa 3078660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 13736366 - 13736321
Alignment:
Q  38 agctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||||||| |||| || ||||||||||| ||||    
T  13736366 agctataagctgttttcataagctatactagagagcttatgaaaat 13736321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 16867736 - 16867781
Alignment:
Q  38 agctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||| |||||||| || ||||| ||||||||||||||||||    
T  16867736 agctataaggtgttttcacaagctatcttggagagcttatggaaat 16867781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 30552705 - 30552664
Alignment:
Q  50 ttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  30552705 ttttcataaactatcctagagagcttatggaaataagctaaa 30552664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 40435052 - 40435007
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaatta 85  Q
    |||||||||||||||||||  ||| ||||||||||||| |||||||    
T  40435052 ctataagctgttttcataagttatactggagagcttattgaaatta 40435007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 43199409 - 43199454
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaa 81  Q
    ||||||||||| ||||||||||| |||||||||| |||||| ||||    
T  43199409 taagctataagttgttttcataaactatcctggacagcttaaggaa 43199454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 11513893 - 11513945
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| ||||||||||| ||||| |||||| ||| ||||||| ||||    
T  11513893 taagctataagttgttttcataagctatcatggagaacttttggaaataagct 11513945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 18066123 - 18066163
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagctta 76  Q
    ||||||||||||||||||||||| ||||| |||||| ||||    
T  18066123 taagctataagctgttttcataagctatcttggagaactta 18066163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 18179315 - 18179275
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagctta 76  Q
    |||||||||||||| |||||||| |||||||||||| ||||    
T  18179315 taagctataagctgctttcataagctatcctggagaactta 18179275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 28803581 - 28803537
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||||| ||| ||||||| ||| |||||||||||||||||||||    
T  28803581 taagctacaagttgttttcttaaactatcctggagagcttatgga 28803537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 29316846 - 29316798
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||| | ||||| |||||| ||||||||||| ||||    
T  29316846 ctataagctgttttcatcagctatcttggagaacttatggaaataagct 29316798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 35485912 - 35485964
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||| ||||    
T  35485912 taagctataagttgtttttataagctatcctgaagagcctatggaaatgagct 35485964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 1742107 - 1742060
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| |||||||||||||||||| ||||| || |||| ||||||||||    
T  1742107 taagatataagctgttttcataatctatcatgaagagtttatggaaat 1742060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 9477947 - 9477994
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| |||||| ||||||||||| ||||||||||||| ||||| ||||    
T  9477947 taagttataagttgttttcataagctatcctggagaggttatgaaaat 9477994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 9530789 - 9530726
Alignment:
Q  50 ttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaaatgtcata 113  Q
    ||||||||| ||||||||||||||||||| || | |||||||  | |||||| || ||||||||    
T  9530789 ttttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatggacatgtcata 9530726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 11488277 - 11488324
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||| |||||||| ||||||||||||| ||||| |||| ||||    
T  11488277 tataagctgctttcataagctatcctggagagattatgcaaataagct 11488324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 13869170 - 13869135
Alignment:
Q  36 taagctataagctgttttcataacctatcctggaga 71  Q
    |||||||||||||||||||||||  |||||||||||    
T  13869170 taagctataagctgttttcataagttatcctggaga 13869135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 35486434 - 35486391
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||  || ||||||||||||| ||||||||||    
T  35486434 ctataagctgttttcgcaagctatcctggagaggttatggaaat 35486391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 43205304 - 43205351
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| ||||| |||||||||||| |||||  |||||||||||||||||    
T  43205304 taagatataatctgttttcataagctatcacggagagcttatggaaat 43205351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 44238109 - 44238054
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||| |||||||| ||  |||| ||||||| |||||||||| |||||||    
T  44238109 taagctataagttgttttcagaagttatcatggagagtttatggaaataagctaaa 44238054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 45067682 - 45067729
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagagctt 75  Q
    ||||||| ||||||||||| |||||| |||| ||||||||||| ||||    
T  45067682 ttttcttgtaagctataagatgttttgataatctatcctggagtgctt 45067729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.0000000000007; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 24158572 - 24158531
Alignment:
Q  42 ataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  24158572 ataagctgttttcataagctatcctggagagcttatggaaat 24158531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 24887358 - 24887306
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||    
T  24887358 taagctaaaagctgttttcataagctatcctggagagcttatgggaataagct 24887306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 14548796 - 14548744
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||||||| ||||    
T  14548796 taagctataagttgttttcataagttattctggagagcttatggaaataagct 14548744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 20502140 - 20502101
Alignment:
Q  39 gctataagctgttttcataacctatcctggagagcttatg 78  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  20502140 gctataagctgttttcataagctatcctgaagagcttatg 20502101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 53891976 - 53891921
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||||||| |||||||| ||||||| ||| |||  |||||||    
T  53891976 ttttcttttaagctataagctgatttcataagctatcctagagtgctgttggaaat 53891921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 2719461 - 2719515
Alignment:
Q  34 tttaagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||| |||||||||||| ||||| |||||| |||||| |||| ||||    
T  2719461 tttaagctataaactgttttcataagctatcttggagaacttatgaaaataagct 2719515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 20669172 - 20669214
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaat 20669214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 24280707 - 24280753
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| ||||    
T  24280707 aagctataagctgttgtcataagctatcatggagagcttatgaaaat 24280753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 25964438 - 25964480
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatg 78  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||    
T  25964438 taagctataagctgttttcataagctatcccggaaagcttatg 25964480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 33965563 - 33965518
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaa 82  Q
    |||||||||| ||||||||||| ||||| || ||||||||||||||    
T  33965563 aagctataagatgttttcataagctatcttgaagagcttatggaaa 33965518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 43875643 - 43875684
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttat 77  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||    
T  43875643 taagctataagttgttttcataagctatcatggagagcttat 43875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 44284144 - 44284103
Alignment:
Q  47 ctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||| |||||||||||||||||| ||||| ||||    
T  44284144 ctgttttcataagctatcctggagagcttatagaaataagct 44284103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 51510264 - 51510215
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagcta 89  Q
    ||||||| |||||||||||  |||| |||||||||||||||||| |||||    
T  51510264 ctataagttgttttcataagttatcgtggagagcttatggaaataagcta 51510215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 21872346 - 21872302
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||||||||| ||||||||||| |||||||||| || |||||||    
T  21872346 taagctataagttgttttcataagctatcctggaaagtttatgga 21872302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 42734012 - 42733960
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| ||||||||  | ||||| |||||||||||||||||| ||||    
T  42734012 taagctataagttgttttcaccagctatcgtggagagcttatggaaataagct 42733960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 43115051 - 43115103
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| ||||||||| | ||||| | |||||||||||||||| ||||    
T  43115051 taagctataagttgttttcatgaactatcattgagagcttatggaaataagct 43115103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 11253497 - 11253543
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  11253497 taagctataagctg-tttcataagctatcctagagagcttagggaaat 11253543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 13709898 - 13709851
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| ||||| |||||||||||| ||||||||||||| |||| |||||    
T  13709898 taaggtataatctgttttcataagctatcctggagagtttattgaaat 13709851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 24785212 - 24785255
Alignment:
Q  48 tgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||| ||||||| ||||||||||| |||| |||||||    
T  24785212 tgttttcataagctatcctcgagagcttatgtaaataagctaaa 24785255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 28622074 - 28622027
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||||||||| ||||| | |||| |||||| ||||    
T  28622074 taagctataagctgttttcataaactatcttcgagaacttatgaaaat 28622027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 43875460 - 43875507
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| |||||| |||| |||||| |||||||||||| |||||||||||    
T  43875460 taagatataagatgttctcataagctatcctggagaacttatggaaat 43875507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000003; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 1275144 - 1275196
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||| ||||    
T  1275144 taagctataagctgttttcatatgttatcctggagagcttatggaaataagct 1275196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 1401104 - 1401148
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  1401104 taagctataagctgttttcataagctatcatggagagcttatgga 1401148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 281923 - 281871
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||| ||||||| ||||||| ||||||| |||||||| ||||    
T  281923 taagctataagctgtgttcataagctatcctagagagctcatggaaataagct 281871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 3168336 - 3168284
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||| |||||||| ||| ||||||||||||||||| |||||| ||||    
T  3168336 taagctataaactgttttcttaagctatcctggagagcttaaggaaataagct 3168284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 28088297 - 28088245
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||| ||||    
T  28088297 taagctataaactgttttcataagctatcatggagagctcatggaaataagct 28088245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 3525140 - 3525187
Alignment:
Q  33 ttttaagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||||||||||||||||||| |||  ||||||| |||||||||||||    
T  3525140 ttttaagctataagctgtttttatatgctatcctagagagcttatgga 3525187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 24838818 - 24838771
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||| |||||||| ||||| |||||||||||| |||||    
T  24838818 taagctataagctgatttcataagctatcatggagagcttatagaaat 24838771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 33787820 - 33787773
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  33787820 taagttataagctgttttcataagttatcttggagagcttatggaaat 33787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 7149548 - 7149507
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttat 77  Q
    |||||||||| || ||||||||| ||||||||||||||||||    
T  7149548 taagctataaactattttcataaactatcctggagagcttat 7149507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 31686431 - 31686398
Alignment:
Q  43 taagctgttttcataacctatcctggagagctta 76  Q
    |||||||||||||||| |||||||||||||||||    
T  31686431 taagctgttttcataagctatcctggagagctta 31686398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 1402991 - 1403043
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||  ||||||||||| ||||| |||||| ||||| ||||||||||    
T  1402991 taagctataaattgttttcataagctatcatggagatcttatagaaattagct 1403043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 2205653 - 2205613
Alignment:
Q  48 tgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||| ||||| |||||||||||||||||| ||||    
T  2205653 tgttttcataagctatcttggagagcttatggaaataagct 2205613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 7945954 - 7945907
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||| ||||||||||| | ||||||||||||||||||||||| ||||    
T  7945954 ctataacctgttttcatagc-tatcctggagagcttatggaaataagct 7945907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 9041511 - 9041467
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    |||||||||||||||||| || | ||||| |||||||||||||||    
T  9041511 taagctataagctgtttttattagctatcgtggagagcttatgga 9041467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 31671149 - 31671097
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||| ||| ||||||| || |||||||| |||| ||||    
T  31671149 taagctataagctgttttcgtaaactatcctagatagcttatgaaaataagct 31671097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 31812088 - 31812036
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||| |||||| ||||||||||| ||||| ||||||||||||| |||| ||||    
T  31812088 taagatataagttgttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 32171462 - 32171514
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||| |||||||  |||  ||||||||||||||||||||||| ||||    
T  32171462 taagctataatctgttttagtaaggtatcctggagagcttatggaaataagct 32171514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 2117402 - 2117453
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||| |||||||||||  |||||| |||||||||| ||||| |||||||    
T  2117402 ctataagttgttttcataagttatcctagagagcttattgaaataagctaaa 2117453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 14492298 - 14492349
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||||||  |||||| ||||| || ||||||| ||||    
T  14492298 aagctataagctgttttcataagttatcctagagagtttgtggaaatcagct 14492349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 19275707 - 19275664
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||| |||||||||||| ||||| || |||||||||||||||    
T  19275707 ctataaactgttttcataagctatcatgaagagcttatggaaat 19275664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000001; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 7218149 - 7218102
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  7218149 taagctataagttgttttcataacctatcctggagaacttatgaaaat 7218102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 25005872 - 25005831
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttat 77  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  25005872 taagctataagttgttttcataagctatcctggagagcttat 25005831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 4700141 - 4700089
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||| ||||||| |||| ||||||||||||||||||| |||| ||||    
T  4700141 taagctataaactgtttttataaactatcctggagagcttatgaaaataagct 4700089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 28938100 - 28938144
Alignment:
Q  39 gctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  28938100 gctataagttgttttcattaccaatcctggagagcttatggaaat 28938144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 44422694 - 44422746
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||| |||| |||| ||||||||||||||||||| |||| ||||    
T  44422694 taagctataagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 4549616 - 4549569
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaatt 84  Q
    |||||||||| ||||||||||| | |||||||||||||||| ||||||    
T  4549616 aagctataagatgttttcataagcaatcctggagagcttattgaaatt 4549569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 33976681 - 33976728
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||| |||||| ||||||| ||||||||||| ||||||||||||||||    
T  33976681 taagttataagttgttttcttaacctatcctagagagcttatggaaat 33976728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 35017575 - 35017618
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||| ||||||||||||| || |||||||||||||||||||||    
T  35017575 ctatatgctgttttcataagctgtcctggagagcttatggaaat 35017618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 39348041 - 39347990
Alignment:
Q  37 aagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||| ||||||||||| |||||||| | ||||||||||||| ||||    
T  39348041 aagctataagttgttttcataaactatcctgcaaagcttatggaaataagct 39347990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 51929845 - 51929803
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||||||||||| |||| || ||||||||||||||||    
T  51929845 tataagctgttttcataagctattctagagagcttatggaaat 51929803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 7137069 - 7136992
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaaatgtcataagcg 117  Q
    ||||||||||||||||||| ||||| |||||| |||||| |||| |||| ||  | ||||||  | ||||||||||||    
T  7137069 ctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagcg 7136992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 25479579 - 25479628
Alignment:
Q  39 gctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||| ||||||||||| ||||||| ||||||||||| |||| ||||    
T  25479579 gctataagttgttttcataagctatcctagagagcttatgaaaataagct 25479628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 47598490 - 47598453
Alignment:
Q  42 ataagctgttttcataacctatcctggagagcttatgg 79  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  47598490 ataagttgttttcataagctatcctggagagcttatgg 47598453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 4549225 - 4549277
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||||| ||||| || |||||| ||| ||||||||||||| ||||    
T  4549225 taagctataagctgctttcacaaactatccaggatagcttatggaaataagct 4549277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 4622079 - 4622143
Alignment:
Q  27 cttttcttttaagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||| | ||||||||||||||||| ||||  ||||| |||||||||| || |||| |||||||    
T  4622079 cttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaa 4622143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 7472310 - 7472358
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||| ||||| ||||| ||||||||||||| |||| ||||    
T  7472310 ctataagctgtttccataagctatcttggagagcttatgaaaataagct 7472358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 14630041 - 14629989
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||| ||||||||| ||||| ||||||  |||||||||| ||||    
T  14630041 taagctataagctattttcataagctatcttggagactttatggaaataagct 14629989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 17269245 - 17269285
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagctta 76  Q
    ||||| ||||| ||||||||||| |||||||||||||||||    
T  17269245 taagcaataagttgttttcataagctatcctggagagctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30257678 - 30257730
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||| |||| ||||||||||| ||||||||||| |||||| ||||| ||||    
T  30257678 taagctttaagttgttttcataaactatcctggagggcttatagaaataagct 30257730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 30259562 - 30259514
Alignment:
Q  36 taagctataagctgttttcataac-ctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||| |||||  ||||| ||||||||||||||||||    
T  30259562 taagctataagctgtttgcataaagctatcatggagagcttatggaaat 30259514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 31517815 - 31517763
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||| ||||||| || || ||||||||||||| |||| ||||    
T  31517815 taagctataagctgtcttcataatctgtcttggagagcttatgaaaataagct 31517763  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 34290231 - 34290283
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||||||||||||| ||||| || ||| |||||| |||| ||||    
T  34290231 taagctataagctgttttcataagctatcttgaagaacttatgaaaataagct 34290283  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 35590967 - 35590915
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    |||||||||||  | |||||||| ||||| |||||||||||||||||| ||||    
T  35590967 taagctataagtcgatttcataagctatcatggagagcttatggaaataagct 35590915  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 37272661 - 37272625
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagag 72  Q
    |||||||||||||||||||||||  ||||||||||||    
T  37272661 taagctataagctgttttcataaattatcctggagag 37272625  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 37295801 - 37295765
Alignment:
Q  28 ttttcttttaagctataagctgttttcataacctatc 64  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  37295801 ttttcgtttaagctataagttgttttcataacctatc 37295765  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 48748668 - 48748600
Alignment:
Q  48 tgttttcataacctatcctggagagcttatggaaattagctaaacttgacttattgaaatgtcataagc 116  Q
    ||||||||||| ||||| |||| || |||||| ||| |||||||| | |||||| || |||||||||||    
T  48748668 tgttttcataagctatcttggacagtttatggtaataagctaaacataacttatggacatgtcataagc 48748600  T

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Target: chr1; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 172881 - 172838
Alignment:
Q  40 ctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||||||||||| ||||| | || |||||||||||||    
T  172881 ctataagctgttttcataaactatcattgaaagcttatggaaat 172838  T

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Target: chr1; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 6279394 - 6279441
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||| ||| || ||||||||| ||||||| ||||||||||||||||    
T  6279394 taagctttaaactattttcataagctatcctagagagcttatggaaat 6279441  T

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Target: chr1; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 12593522 - 12593483
Alignment:
Q  42 ataagctgttttcataacctatcctggagagcttatggaa 81  Q
    ||||||||||||||||| ||||| ||||| ||||||||||    
T  12593522 ataagctgttttcataagctatcttggagcgcttatggaa 12593483  T

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Target: chr1; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 15515536 - 15515583
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    ||||||||||| |||||||||||  |||| |||| |||||||||||||    
T  15515536 taagctataagttgttttcataagttatcatggatagcttatggaaat 15515583  T

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Target: chr1; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 27140478 - 27140525
Alignment:
Q  41 tataagctgttttcataacctatcctggagagcttatggaaattagct 88  Q
    ||||||||||||| |||| ||||| ||||||||||||| |||| ||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagct 27140525  T

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Target: chr1; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 27738255 - 27738200
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||  ||||||||||| |||| | |||||||||||||| || |||||||    
T  27738255 taagctataatttgttttcataagctatacaggagagcttatggatataagctaaa 27738200  T

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Target: chr1; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 27887193 - 27887138
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||| ||||||||||| ||||| |||||||| |||  |||| |||||||    
T  27887193 taagctataagttgttttcataaactatcatggagagcatataaaaataagctaaa 27887138  T

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Target: chr1; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 28482308 - 28482253
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    |||||||||||||||||| ||||  |||| ||||||||||| | |||| |||||||    
T  28482308 taagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaa 28482253  T

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Target: chr1; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 34179947 - 34179900
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaat 83  Q
    |||||||||| |||||||||||| |||||||| | || ||||||||||    
T  34179947 taagctataaactgttttcataaactatcctgaaaagtttatggaaat 34179900  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 35869 - 35826
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatgga 80  Q
    ||||||||| |||| |||||||| |||||||||||||||||||||    
T  35869 taagctata-gctgctttcataaactatcctggagagcttatgga 35826  T

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Target: scaffold0091 (Bit Score: 28; Significance: 0.0000007; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 6947 - 7002
Alignment:
Q  36 taagctataagctgttttcataacctatcctggagagcttatggaaattagctaaa 91  Q
    ||||||||||||||||||  ||| ||||| || |||||||||| |||| |||||||    
T  6947 taagctataagctgtttttgtaagctatcatgaagagcttatgaaaataagctaaa 7002  T

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