View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: Solexa-NF5795-4 (Length: 150)
Name: Solexa-NF5795-4
Description: NF5795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5795-4 |
 |  |
|
| [»] chr6 (11 HSPs) |
 |  |
|
| [»] chr2 (2 HSPs) |
 |  |
|
| [»] chr3 (15 HSPs) |
 |  |
|
| [»] scaffold0012 (2 HSPs) |
 |  |  |
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| [»] chr1 (16 HSPs) |
 |  |
|
| [»] scaffold0186 (3 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 119; Significance: 2e-61; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-61
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 1083412 - 1083288
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggt |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1083412 |
agttattaacattgttgaactatcctgcagtttaatgagtcactctgcatgttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggt |
1083313 |
T |
 |
| Q |
107 |
aaactagccaaatatatggtttgtg |
131 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
1083312 |
aaactagtcaaatatatggtttgtg |
1083288 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 73; E-Value: 7e-34
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 40502282 - 40502190
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
40502282 |
ttatgtgttcgattcgcctaaaacaagattatttatacttgggaaagataaactagccaaatatatggtctgtgtgaccacattttttaaggt |
40502190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 73; E-Value: 7e-34
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 40502494 - 40502402
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
40502494 |
ttatgtgtttgattcgcttaaaacaagattatttatacttgggaaagataaactagccaaatatatggtctgtgtgaccacattttttaaggt |
40502402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 1083151 - 1083064
Alignment:
| Q |
61 |
tgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaag |
148 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||||| |||||||| ||||||||||| |||||| || ||||||||||||||||||||| |
|
|
| T |
1083151 |
tgtgttcgattcacctaaaatgagattatttatacctgggaaagttaaactagccagatatatagtctgtgtaaccacattttttaag |
1083064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 40502719 - 40502663
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
40502719 |
agttactaacattgttgaactatcctgcagtttaatgagtcattctgcatgttatgt |
40502663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 24919978 - 24919886
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
|||||| |||||||| |||||||| ||||| ||||| |||||||| ||||||| ||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
24919978 |
ttatgtcttcgattcacttaaaacgggattagttatatctgggaaagataaactaaccaaatatatgttctgtgtgaccacattttttaaggt |
24919886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 24919515 - 24919464
Alignment:
| Q |
97 |
tgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaag |
148 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
24919515 |
tgggaaagataaactagccaaatatatggtctgtgttaccacattttttaag |
24919464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 31391151 - 31391218
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
31391151 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
31391218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 31391575 - 31391642
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
31391575 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
31391642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 24921084 - 24921028
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
||||| |||||||||||||||||||| ||| ||||||||||| ||||| |||||||| |
|
|
| T |
24921084 |
agttactaacattgttgaactatcctacagcttaatgagtcactctgcctgttatgt |
24921028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 31391363 - 31391429
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatg |
124 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | ||||||||||||||||||| |
|
|
| T |
31391363 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatg |
31391429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 24920151 - 24920098
Alignment:
| Q |
97 |
tgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
|||||||| ||||||||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
24920151 |
tgggaaagataaactagccaaatatatgttatgtgtgaccacattttttaaggt |
24920098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 1082708 - 1082644
Alignment:
| Q |
84 |
gattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaag |
148 |
Q |
| |
|
||||||||| || || ||||| ||||||||||| |||||| || ||||||||||||||||||||| |
|
|
| T |
1082708 |
gattatttacacctgagaaagttaaactagccagatatatagtctgtgtaaccacattttttaag |
1082644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 1082918 - 1082854
Alignment:
| Q |
84 |
gattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaag |
148 |
Q |
| |
|
|||||||||||| || ||||| |||||||||| ||||||| || |||||||||||||||||||| |
|
|
| T |
1082918 |
gattatttatacctgagaaagttaaactagcccaatatatagtccgtgtaaccacattttttaag |
1082854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 24919766 - 24919674
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
|||||| |||||||| | |||||| ||||| ||||| |||||||| ||||||||| ||||||||| | | ||| ||||||||||||||||| |
|
|
| T |
24919766 |
ttatgtcttcgattcacctaaaacgggattagttatatctgggaaagataaactagctaaatatatgttctctgtgaccacattttttaaggt |
24919674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 31392000 - 31392067
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||| ||||||| |
|
|
| T |
31392000 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaattatatgg |
31392067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 31391787 - 31391855
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatac-ttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || | ||||| | |||||||||||||||||||| |
|
|
| T |
31391787 |
ttatgtgttcgattctcataaaacaggattagttacacatggggaatgataaactagccaaatatatgg |
31391855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 24920824 - 24920757
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||| | ||||||||||||| ||| || || ||| | ||||||| |||||||||||| |
|
|
| T |
24920824 |
ttatgtgttcgattcgcgtaaaacaagattagttacacctgagaatgataaactaaccaaatatatgg |
24920757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 31390955 - 31390999
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytc |
51 |
Q |
| |
|
||||||||||||||||||||| |||| || |||||||||||| || |
|
|
| T |
31390955 |
agttattaacattgttgaactttcctacattttaatgagtcactc |
31390999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 24920401 - 24920336
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatat |
123 |
Q |
| |
|
|||||||||||||| | |||||||||||| ||| || |||||| | |||||||||||||||||| |
|
|
| T |
24920401 |
ttatgtgttcgatttgcgtaaaacaagatttgttacacgtgggaatgataaactagccaaatatat |
24920336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 81; Significance: 1e-38; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 15342177 - 15342085
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15342177 |
ttatgtgttcgattcgcttaaaacaagattatttatacttgggaaagataaactagccaaatgtatggtttgtgtaaccacattttttaaggt |
15342085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 15341965 - 15341873
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
15341965 |
ttatgtgttcgattcgcctaaaacaagattatttatactccagaaatataaactagccaaatatatggtctgtgtgaccacattttttaaggt |
15341873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 15341753 - 15341662
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaagg |
149 |
Q |
| |
|
||||||||||||||| | |||||| |||||||||| || |||||||| ||||||| ||||||||||||| ||||| | |||||||||||||| |
|
|
| T |
15341753 |
ttatgtgttcgattcgcctaaaacgagattatttacacctgggaaagataaactacccaaatatatggtctgtgtgatcacattttttaagg |
15341662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 19846035 - 19846127
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||| ||||| | |||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||| | ||||| ||||||||| |
|
|
| T |
19846035 |
ttatgtgtttgattcccctaaaacgggattatttatacctgggaaagataaactagccaaatatatggtctgtgtgatcacatattttaaggt |
19846127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 19846247 - 19846339
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||||||||| | |||||| |||||||||||| || ||||| ||||||||||||||||||| | ||| | ||||||||||||||||| |
|
|
| T |
19846247 |
ttatgtgttcgattcgcctaaaacgggattatttatacctgagaaagataaactagccaaatatatgatctgtctgaccacattttttaaggt |
19846339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 15342401 - 15342345
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
15342401 |
agttactaacattgttgaactatcctgcagtttaatgagtcactctacatgttatgt |
15342345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 19845831 - 19845920
Alignment:
| Q |
61 |
tgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
|||||||||||| | ||||| |||||||||||| ||| |||| |||||||| |||||||||||||||||| || ||||| |||||||| |
|
|
| T |
19845831 |
tgtgttcgattcgcctaaaatgggattatttatacctggaaaagttaaactagtcaaatatatggtttgtgtgacgacattctttaaggt |
19845920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 14524065 - 14524127
Alignment:
| Q |
88 |
atttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||||||||||| |||| |||| ||||||||||| ||||| |||||||| |||||||| |
|
|
| T |
14524065 |
atttatacttgggaaagataaattagctaaatatatggtctgtgtgaccacattgtttaaggt |
14524127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19845570 - 19845626
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
||||| |||||||||| ||||||||| ||||||||||||||| ||| | |||||||| |
|
|
| T |
19845570 |
agttactaacattgttcaactatcctacagtttaatgagtcactctacctgttatgt |
19845626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 15341503 - 15341452
Alignment:
| Q |
97 |
tgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaag |
148 |
Q |
| |
|
|||||||| |||||||| |||||||||||| ||||| | ||||||||||||| |
|
|
| T |
15341503 |
tgggaaagataaactagtcaaatatatggtctgtgtgaacacattttttaag |
15341452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 145
Target Start/End: Complemental strand, 2430701 - 2430670
Alignment:
| Q |
114 |
ccaaatatatggtttgtgtaaccacatttttt |
145 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |
|
|
| T |
2430701 |
ccaaatatatggtttgtgtgaccacatttttt |
2430670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 81; Significance: 1e-38; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 11355468 - 11355560
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11355468 |
ttatgtgttcgattcacttaaaacaagattatttatacttgggaaagataaactagccaaatatatggtttgtgtaaccacattttgtaaggt |
11355560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 68; E-Value: 7e-31
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 11355273 - 11355348
Alignment:
| Q |
75 |
ttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11355273 |
ttaaaacaagattatttatacttgggaaagataaactagacaaatatatggtttgtgtaaccacattttttaaggt |
11355348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 77; Significance: 3e-36; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 25010492 - 25010584
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25010492 |
ttatgtgttcgattcgcttaaaacaagattatttatacttgggaaagataaaatagtcaaatatatggtttgtgtaaccacattttttaaggt |
25010584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 25010298 - 25010373
Alignment:
| Q |
75 |
ttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
25010298 |
ttaaaacaagattatttatacttgggaaagataaactagccaaatttatggtttgtgtaaccacatttgttaaggt |
25010373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 34164480 - 34164566
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttt |
144 |
Q |
| |
|
||||||||||||||| | |||||| ||||||||||||| ||| |||| |||||||| |||||||||||||||||| |||| |||||| |
|
|
| T |
34164480 |
ttatgtgttcgattcgcctaaaacgagattatttatacctggaaaagataaactagtcaaatatatggtttgtgtgaccatattttt |
34164566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 34164268 - 34164360
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||| |||||| | ||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||| |||||| |
|
|
| T |
34164268 |
ttatgtgcccgattcgcctaaaacagaattatttatacatgggaaagataaactagccaaatatatggtctgtgtgaccacattttataaggt |
34164360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 4267663 - 4267719
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||| |
|
|
| T |
4267663 |
agttattaacattgttgaactatcctacagtttaatgagtcactgtgcctgttatgt |
4267719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 4268345 - 4268412
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| | |||||| | |||||||||||||||||||| |
|
|
| T |
4268345 |
ttatgtgttcgattctcgtaaaacatgattagttacagctgggaatgataaactagccaaatatatgg |
4268412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 4268769 - 4268835
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatg |
124 |
Q |
| |
|
||||||||||||||| | ||||||| ||||| ||| || |||||| | ||||||||||||||||||| |
|
|
| T |
4268769 |
ttatgtgttcgattcgcgtaaaacaggattagttacacctgggaatgataaactagccaaatatatg |
4268835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 13819056 - 13819000
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||| | || |||||||| |
|
|
| T |
13819056 |
agttactaacattgttgaactatcctacagtttaatgagtcactgtgtctgttatgt |
13819000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 12212147 - 12212212
Alignment:
| Q |
60 |
atgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||| | ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
12212147 |
atgtgttcgattcgcgtaaaacaggattagttacacctgggaatgataaactagccaaatatatgg |
12212212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 13818798 - 13818731
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||| | ||||||| ||| | ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
13818798 |
ttatgtgttcgattcgcgtaaaacaggataagttacacctgggaatgataaactagccaaatatatgg |
13818731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 12211509 - 12211595
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttt |
144 |
Q |
| |
|
||||||||| ||||| | |||||| |||||| ||| || | |||||| || ||||||||||||||||| |||| | |||||| |||| |
|
|
| T |
12211509 |
ttatgtgtttgattcacataaaacgagattagttacacctcggaaagatacactagccaaatatatgggttgtatgaccacaatttt |
12211595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 12211723 - 12211788
Alignment:
| Q |
60 |
atgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||| | ||||||| ||||| ||| | |||||| | |||||||||||||||||||| |
|
|
| T |
12211723 |
atgtgttcgattcgcgtaaaacaggattagttacatctgggaatgataaactagccaaatatatgg |
12211788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 13815447 - 13815382
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatat |
123 |
Q |
| |
|
||||||||||||||| | ||||||| |||| ||| || |||||| | |||||||||||||||||| |
|
|
| T |
13815447 |
ttatgtgttcgattcgcgtaaaacaggatttgttacacctgggaatgataaactagccaaatatat |
13815382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 4268558 - 4268625
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| ||| | || ||| | |||||||||||||||||||| |
|
|
| T |
4268558 |
ttatgtgttcgattatcgtaaaacaggattagttacaactgagaatgataaactagccaaatatatgg |
4268625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 145
Target Start/End: Complemental strand, 27335563 - 27335532
Alignment:
| Q |
114 |
ccaaatatatggtttgtgtaaccacatttttt |
145 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |
|
|
| T |
27335563 |
ccaaatatatggtttgtgtgaccacatttttt |
27335532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 63; Significance: 7e-28; HSPs: 2)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 63; E-Value: 7e-28
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 142389 - 142299
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaag |
148 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||| ||||| |
|
|
| T |
142389 |
ttatgtgttcgattcgcctaaaacaagattatttatacctgggaaagataaactagccaaatatatggtctgtgtgaccacatttattaag |
142299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #2
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 142172 - 142083
Alignment:
| Q |
61 |
tgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
|||||||||||| | ||||| |||||||||||||| |||||||| ||||||||||||||||| ||| ||||| ||||||||| ||||||| |
|
|
| T |
142172 |
tgtgttcgattcgcctaaaagaagattatttatacatgggaaagataaactagccaaatatacggtctgtgtgaccacatttgttaaggt |
142083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 1e-26; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 24708016 - 24708108
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||||||||| | | |||||| |||||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
24708016 |
ttatgtgttcgattcgcctgaaacaatattatttatacttgggaaagataaactagcaaaatatatggtctgtgtgaccacattttttaaggt |
24708108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 17227654 - 17227740
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttt |
144 |
Q |
| |
|
||||||||||||||| | |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
17227654 |
ttatgtgttcgattcgcctaaaacgggattatttatatctgggaaagataaactagccaaatatatggtttgtgtgaccatattttt |
17227740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 29497069 - 29497156
Alignment:
| Q |
61 |
tgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaag |
148 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||||| |||||||| ||||||||||| |||||| || ||||||| ||||||||||||| |
|
|
| T |
29497069 |
tgtgttcgattcgcctaaaatgagattatttatacctgggaaagttaaactagccagatatatagtatgtgtaagcacattttttaag |
29497156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 29496808 - 29496864
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
29496808 |
agttactaacattgttgaactatcctacagtttaatgagtcactctgcatgttatgt |
29496864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 19148855 - 19148799
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||| |
|
|
| T |
19148855 |
agttattaacattgttgaactatcctacagtttaatgagtcattgtgcctgttatgt |
19148799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 23675909 - 23675853
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||| |
|
|
| T |
23675909 |
agttattaacattgttgaactatcctacagtttaatgagtcactgtgcctgttatgt |
23675853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 17227442 - 17227534
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaaggt |
150 |
Q |
| |
|
||||||||| ||||| | ||||||| ||||||||||| | ||||| | |||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
17227442 |
ttatgtgtttgattcgcctaaaacagaattatttatacctaagaaagatttactagccaaatatatggtctgtgtgaccacattttttaaggt |
17227534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 29497302 - 29497366
Alignment:
| Q |
84 |
gattatttatacttgggaaaggtaaactagccaaatatatggtttgtgtaaccacattttttaag |
148 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||| |||||| || ||||||| ||||||||||||| |
|
|
| T |
29497302 |
gattatttatacctgagaaagttaaactagccagatatatagtctgtgtaagcacattttttaag |
29497366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 17225148 - 17225215
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||| | ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
17225148 |
ttatgtgttcgattcgcgtaaaacaggattagttacacctgggaatgataaactagccaaatatatgg |
17225215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 19148173 - 19148106
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| | |||||| | |||||||||||||||||||| |
|
|
| T |
19148173 |
ttatgtgttcgattctcgtaaaacatgattagttacagctgggaatgataaactagccaaatatatgg |
19148106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 23675227 - 23675160
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| | |||||| | |||||||||||||||||||| |
|
|
| T |
23675227 |
ttatgtgttcgattctcgtaaaacatgattagttacagctgggaatgataaactagccaaatatatgg |
23675160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 19147749 - 19147683
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatg |
124 |
Q |
| |
|
||||||||||||||| | ||||||| ||||| ||| || |||||| | ||||||||||||||||||| |
|
|
| T |
19147749 |
ttatgtgttcgattcgcgtaaaacaggattagttacacctgggaatgataaactagccaaatatatg |
19147683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 17227280 - 17227318
Alignment:
| Q |
106 |
taaactagccaaatatatggtttgtgtaaccacattttt |
144 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
17227280 |
taaactagccaaatatatggtatgtgtgaccacattttt |
17227318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 24707787 - 24707847
Alignment:
| Q |
7 |
agttattaacattgttgaactat----cctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
||||| ||||||||||||||||| | ||||||||| ||||||| |||||||||||||| |
|
|
| T |
24707787 |
agttactaacattgttgaactatatatcttgcagtttattgagtcactctgcatgttatgt |
24707847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 19147960 - 19147893
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| ||| | || ||| | |||||||||||||||||||| |
|
|
| T |
19147960 |
ttatgtgttcgattatcgtaaaacaggattagttacaactgagaatgataaactagccaaatatatgg |
19147893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 23675014 - 23674947
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| ||| | || ||| | |||||||||||||||||||| |
|
|
| T |
23675014 |
ttatgtgttcgattatcgtaaaacaggattagttacaactgagaatgataaactagccaaatatatgg |
23674947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 7e-16; HSPs: 30)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 41549199 - 41549255
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||| |
|
|
| T |
41549199 |
agttattaacattgttgaactatcctacagtttaatgagtcactgtgcctgttatgt |
41549255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22143610 - 22143677
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22143610 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22143677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22143822 - 22143889
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22143822 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22143889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22144034 - 22144101
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22144034 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22144101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22144246 - 22144313
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22144246 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22144313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22144457 - 22144524
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22144457 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22144524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22146415 - 22146482
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22146415 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22146482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22146627 - 22146694
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22146627 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22146694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22146839 - 22146906
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22146839 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22146906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22147051 - 22147118
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22147051 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22147118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22147263 - 22147330
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22147263 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22147330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22147475 - 22147542
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22147475 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22147542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22147899 - 22147966
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22147899 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22147966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22213219 - 22213286
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22213219 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22213286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22213431 - 22213498
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22213431 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22213498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22213852 - 22213919
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22213852 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22213919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22214064 - 22214131
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22214064 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22214131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22214276 - 22214343
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22214276 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22214343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22214488 - 22214555
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22214488 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22214555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22214912 - 22214979
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22214912 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22214979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22215124 - 22215191
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22215124 |
ttatgtgttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22215191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22147687 - 22147754
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||| ||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22147687 |
ttatgtgtttgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22147754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22148111 - 22148178
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||| ||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22148111 |
ttatgtgtttgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22148178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22213007 - 22213074
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||| ||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22213007 |
ttatgtgtttgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22213074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22214700 - 22214767
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||| ||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22214700 |
ttatgtgtttgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22214767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 41549881 - 41549948
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| | |||||| | |||||||||||||||||||| |
|
|
| T |
41549881 |
ttatgtgttcgattctcgtaaaacatgattagttacagctgggaatgataaactagccaaatatatgg |
41549948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 12490980 - 12490914
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatg |
124 |
Q |
| |
|
||||||||| ||||| | |||||| |||||||||||| || ||||| ||||||||||||||||||| |
|
|
| T |
12490980 |
ttatgtgtttgattcgcctaaaacgggattatttatacctgagaaagataaactagccaaatatatg |
12490914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 22212802 - 22212862
Alignment:
| Q |
65 |
ttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
|||||||||| ||||||| ||||| ||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22212802 |
ttcgattctcataaaacaggattagttacacatgggaatgataaactagccaaatatatgg |
22212862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 22213643 - 22213709
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| || || |||||| | |||||||||||||||||||| |
|
|
| T |
22213643 |
ttatgtgttcgattctcataaaacaggatta-gtacacatgggaatgataaactagccaaatatatgg |
22213709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 41550094 - 41550161
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| ||| | || ||| | |||||||||||||||||||| |
|
|
| T |
41550094 |
ttatgtgttcgattatcgtaaaacaggattagttacaactgagaatgataaactagccaaatatatgg |
41550161 |
T |
 |
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Target: chr4 (Bit Score: 43; Significance: 7e-16; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 55042499 - 55042555
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| | ||| |||||||| |
|
|
| T |
55042499 |
agttattaacattgttgaactatcctacagtttaatgagtcactgtgcctgttatgt |
55042555 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 55043181 - 55043248
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||||| ||||||| ||||| ||| | |||||| | |||||||||||||||||||| |
|
|
| T |
55043181 |
ttatgtgttcgattctcgtaaaacatgattagttacagctgggaatgataaactagccaaatatatgg |
55043248 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 55043394 - 55043461
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| ||| | || ||| | |||||||||||||||||||| |
|
|
| T |
55043394 |
ttatgtgttcgattatcgtaaaacaggattagttacaactgagaatgataaactagccaaatatatgg |
55043461 |
T |
 |
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Target: scaffold0186 (Bit Score: 35; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0186
Description:
Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 27693 - 27749
Alignment:
| Q |
7 |
agttattaacattgttgaactatcctgcagtttaatgagtcaytctgcatgttatgt |
63 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||| | | | |||||||| |
|
|
| T |
27693 |
agttactaacattgttgaactatcctacagtttaatgagtcactgtacctgttatgt |
27749 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0186; HSP #2
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 27952 - 28018
Alignment:
| Q |
59 |
tatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
|||||||||||||| | ||||||||||||| ||| || || ||| | |||||||||||||||||||| |
|
|
| T |
27952 |
tatgtgttcgattcgcgtaaaacaagattagttacacctgagaatgataaactagccaaatatatgg |
28018 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0186; HSP #3
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 28587 - 28654
Alignment:
| Q |
58 |
ttatgtgttcgattctcttaaaacaagattatttatacttgggaaaggtaaactagccaaatatatgg |
125 |
Q |
| |
|
||||||||||||||| | ||||||| ||||| ||| || || ||| | |||||||||||||| ||||| |
|
|
| T |
28587 |
ttatgtgttcgattcgcgtaaaacaggattagttacacctgtgaatgataaactagccaaatctatgg |
28654 |
T |
 |
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