View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5797-12 (Length: 139)
Name: Solexa-NF5797-12
Description: NF5797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5797-12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 121; Significance: 2e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 121; E-Value: 2e-62
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 41089715 - 41089847
Alignment:
| Q |
7 |
aactactttactaaattaagacaaatttcctacttttgaaataattcgatatcatgatccaacatttctcatatttaacttttcaatttatttacttaat |
106 |
Q |
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| T |
41089715 |
aactactttactaaattaagacaaatttcctacttttgaaataatacgatatcatgatccaacatttctcatatttaagttttcaatttatttacttaat |
41089814 |
T |
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| Q |
107 |
ttagcagaatcacagctttctattgaattaata |
139 |
Q |
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| T |
41089815 |
ttagcagcatcacagctttctattgaattaata |
41089847 |
T |
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