View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5798-10 (Length: 134)
Name: Solexa-NF5798-10
Description: NF5798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5798-10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 126; Significance: 2e-65; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 46686606 - 46686735
Alignment:
| Q |
5 |
acaaaggcaagaacaaaacgggtaatttaggaatttcagttgagaatccaacatcaaatttctttcgttacaaactcatagccatcattaaaaaaccacc |
104 |
Q |
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| T |
46686606 |
acaaaggcaagaacaaaacgggtaatttaggaatttcagttgagaatccaacatcaaatttctttcgttacaaactcatagccatcattaaaacaccacc |
46686705 |
T |
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| Q |
105 |
aacttcttggttgtttcccatacaaggaaa |
134 |
Q |
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| T |
46686706 |
aacttcttggttgtttcccatacaaggaaa |
46686735 |
T |
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