View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5799-8 (Length: 141)
Name: Solexa-NF5799-8
Description: NF5799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5799-8 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 137; Significance: 6e-72; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 6e-72
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 35149116 - 35148976
Alignment:
| Q |
1 |
caaaggagacagttccgagcatcaaaaggtattatatataattcttcctaaactattaattgttgtagagaaagctattgattttttaaatgtttagttt |
100 |
Q |
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| T |
35149116 |
caaaggagacagttccgagcatcaaaaggtattatatataattcttcctaaattattaattgttgtagagaaagctattgattttttaaatgtttagttt |
35149017 |
T |
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| Q |
101 |
agaatgctaataaagcctttgatatcttgaaacgcagcgaa |
141 |
Q |
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| T |
35149016 |
agaatgctaataaagcctttgatatcttgaaacgcagcgaa |
35148976 |
T |
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