View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5802-11 (Length: 111)
Name: Solexa-NF5802-11
Description: NF5802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5802-11 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 105; Significance: 6e-53; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 105; E-Value: 6e-53
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 3914517 - 3914413
Alignment:
| Q |
7 |
acttacaagtcaaatagagaagtaagctttccaagctcgggagggatatgtccacttaggagattatcattcagttccctacaaaaggttgcatattaat |
106 |
Q |
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| T |
3914517 |
acttacaagtcaaatagagaagtaagctttccaagctcgggagggatatgtccacttaggagattatcattcagttccctacaaaaggttgcatattaat |
3914418 |
T |
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| Q |
107 |
ggctg |
111 |
Q |
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||||| |
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| T |
3914417 |
ggctg |
3914413 |
T |
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