View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5802-15 (Length: 80)

Name: Solexa-NF5802-15
Description: NF5802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5802-15
Solexa-NF5802-15
[»] chr6 (28 HSPs)
chr6 (1-79)||(12170525-12170603)
chr6 (1-79)||(3913529-3913607)
chr6 (1-80)||(33053122-33053201)
chr6 (1-79)||(23128675-23128753)
chr6 (1-71)||(32327180-32327250)
chr6 (1-79)||(606261-606339)
chr6 (1-78)||(29319834-29319911)
chr6 (1-79)||(67956-68034)
chr6 (1-79)||(29255401-29255479)
chr6 (1-79)||(30608470-30608548)
chr6 (1-79)||(127726-127804)
chr6 (11-79)||(4010467-4010535)
chr6 (9-80)||(3355182-3355253)
chr6 (5-76)||(7515160-7515231)
chr6 (1-72)||(30894657-30894728)
chr6 (1-80)||(34018617-34018696)
chr6 (1-63)||(1933663-1933725)
chr6 (1-78)||(30493589-30493666)
chr6 (24-77)||(546111-546164)
chr6 (1-78)||(26588428-26588505)
chr6 (16-71)||(32191693-32191748)
chr6 (27-77)||(1523491-1523541)
chr6 (15-77)||(7976144-7976206)
chr6 (16-78)||(28981249-28981311)
chr6 (17-62)||(14801900-14801945)
chr6 (26-78)||(27097598-27097650)
chr6 (38-77)||(33543561-33543600)
chr6 (26-65)||(35001677-35001716)
[»] chr1 (42 HSPs)
chr1 (1-79)||(35484346-35484424)
chr1 (1-79)||(7337618-7337696)
chr1 (1-79)||(32395057-32395135)
chr1 (1-79)||(45415617-45415695)
chr1 (1-71)||(49504558-49504628)
chr1 (1-79)||(5983895-5983973)
chr1 (1-71)||(21947581-21947651)
chr1 (1-78)||(14872698-14872775)
chr1 (1-71)||(1742340-1742410)
chr1 (1-79)||(44915698-44915776)
chr1 (3-79)||(35462004-35462080)
chr1 (1-80)||(8211865-8211943)
chr1 (1-79)||(3228328-3228406)
chr1 (1-79)||(10776416-10776494)
chr1 (14-80)||(13144766-13144832)
chr1 (2-80)||(29738618-29738696)
chr1 (16-77)||(24597281-24597342)
chr1 (1-71)||(34878241-34878311)
chr1 (16-79)||(51916620-51916683)
chr1 (1-71)||(6217790-6217860)
chr1 (1-55)||(7836775-7836829)
chr1 (1-71)||(23291605-23291675)
chr1 (1-79)||(27580083-27580161)
chr1 (1-78)||(18939378-18939455)
chr1 (17-61)||(15431639-15431683)
chr1 (1-77)||(26535408-26535484)
chr1 (17-77)||(37720106-37720166)
chr1 (17-77)||(48750260-48750320)
chr1 (16-60)||(49626987-49627031)
chr1 (28-79)||(31984247-31984298)
chr1 (17-76)||(36775668-36775727)
chr1 (16-62)||(24583024-24583070)
chr1 (1-71)||(31919047-31919117)
chr1 (12-78)||(43412444-43412510)
chr1 (16-62)||(44543346-44543392)
chr1 (10-71)||(21686941-21687002)
chr1 (14-71)||(45789613-45789670)
chr1 (16-77)||(47132977-47133038)
chr1 (1-41)||(36894262-36894302)
chr1 (16-67)||(31692434-31692485)
chr1 (1-64)||(39888241-39888304)
chr1 (38-65)||(39927505-39927532)
[»] chr7 (38 HSPs)
chr7 (1-79)||(39171545-39171623)
chr7 (1-78)||(9450093-9450170)
chr7 (1-79)||(48316767-48316845)
chr7 (1-79)||(19296928-19297006)
chr7 (2-79)||(12141263-12141340)
chr7 (1-79)||(8001501-8001579)
chr7 (1-67)||(28062190-28062256)
chr7 (1-79)||(34899562-34899640)
chr7 (1-79)||(28044711-28044789)
chr7 (1-79)||(30756774-30756852)
chr7 (1-71)||(37837421-37837491)
chr7 (1-79)||(42978668-42978746)
chr7 (1-79)||(47590369-47590447)
chr7 (1-71)||(39328753-39328823)
chr7 (1-79)||(40993215-40993293)
chr7 (16-80)||(19404711-19404775)
chr7 (1-79)||(48061480-48061558)
chr7 (1-70)||(5792854-5792923)
chr7 (1-78)||(13796885-13796962)
chr7 (17-77)||(24350796-24350856)
chr7 (17-77)||(35133021-35133081)
chr7 (16-66)||(11343883-11343933)
chr7 (9-79)||(25287141-25287211)
chr7 (1-71)||(38798839-38798909)
chr7 (16-78)||(38880534-38880596)
chr7 (9-79)||(46700101-46700171)
chr7 (10-71)||(45349762-45349823)
chr7 (12-80)||(5348546-5348614)
chr7 (16-78)||(5078370-5078432)
chr7 (1-55)||(22087375-22087429)
chr7 (1-71)||(24770304-24770374)
chr7 (26-63)||(1448783-1448820)
chr7 (1-54)||(9977186-9977239)
chr7 (17-77)||(22743018-22743078)
chr7 (17-77)||(28476301-28476361)
chr7 (16-71)||(4999992-5000047)
chr7 (1-51)||(29844922-29844970)
chr7 (1-80)||(39229072-39229151)
[»] chr2 (49 HSPs)
chr2 (1-79)||(1421742-1421820)
chr2 (1-79)||(7677829-7677907)
chr2 (1-79)||(31210563-31210641)
chr2 (1-80)||(31788522-31788601)
chr2 (1-79)||(4778819-4778897)
chr2 (1-79)||(19062308-19062386)
chr2 (1-79)||(9169214-9169292)
chr2 (5-71)||(33585699-33585765)
chr2 (1-79)||(38445232-38445310)
chr2 (2-79)||(37876562-37876639)
chr2 (15-79)||(29173676-29173740)
chr2 (1-80)||(7448313-7448392)
chr2 (1-72)||(27097369-27097440)
chr2 (1-78)||(30399992-30400069)
chr2 (1-79)||(4041550-4041628)
chr2 (1-79)||(7646539-7646622)
chr2 (16-71)||(36691955-36692010)
chr2 (1-79)||(4904101-4904179)
chr2 (1-79)||(25509024-25509102)
chr2 (1-71)||(33923771-33923841)
chr2 (1-79)||(35220391-35220469)
chr2 (1-79)||(36943077-36943155)
chr2 (11-80)||(31128735-31128804)
chr2 (17-77)||(10237174-10237234)
chr2 (1-71)||(1415623-1415693)
chr2 (1-71)||(18763534-18763604)
chr2 (1-80)||(8809346-8809425)
chr2 (16-71)||(12677414-12677469)
chr2 (1-76)||(41327569-41327644)
chr2 (1-76)||(42698660-42698735)
chr2 (2-80)||(5427824-5427901)
chr2 (16-77)||(10929746-10929807)
chr2 (22-79)||(17994686-17994743)
chr2 (1-54)||(36175477-36175530)
chr2 (17-77)||(3309027-3309087)
chr2 (16-80)||(11985188-11985252)
chr2 (46-77)||(17319432-17319463)
chr2 (16-71)||(29574592-29574647)
chr2 (7-49)||(4100417-4100459)
chr2 (16-62)||(17249120-17249166)
chr2 (1-79)||(19028870-19028948)
chr2 (16-62)||(32448592-32448638)
chr2 (12-61)||(16484658-16484707)
chr2 (16-77)||(37416791-37416852)
chr2 (16-72)||(11833558-11833614)
chr2 (16-79)||(17151504-17151568)
chr2 (34-62)||(18113968-18113996)
chr2 (26-62)||(41431119-41431155)
chr2 (4-63)||(29279542-29279601)
[»] chr5 (30 HSPs)
chr5 (5-80)||(11073854-11073929)
chr5 (1-80)||(38597852-38597931)
chr5 (1-79)||(13007284-13007362)
chr5 (1-79)||(34945448-34945526)
chr5 (1-79)||(24229739-24229817)
chr5 (1-80)||(6012092-6012171)
chr5 (1-79)||(6216953-6217031)
chr5 (1-79)||(9113680-9113758)
chr5 (1-79)||(7036274-7036352)
chr5 (1-79)||(25980213-25980291)
chr5 (21-80)||(15571561-15571620)
chr5 (1-71)||(1409553-1409623)
chr5 (1-79)||(10722816-10722894)
chr5 (1-79)||(13421988-13422066)
chr5 (1-71)||(14726424-14726494)
chr5 (1-79)||(31391708-31391786)
chr5 (1-71)||(38007413-38007483)
chr5 (1-79)||(41630557-41630635)
chr5 (1-78)||(7930232-7930309)
chr5 (1-78)||(26878064-26878141)
chr5 (17-78)||(28540862-28540923)
chr5 (16-80)||(14082350-14082414)
chr5 (17-77)||(14211298-14211358)
chr5 (1-71)||(26825485-26825555)
chr5 (12-70)||(35920960-35921018)
chr5 (10-71)||(11976898-11976959)
chr5 (17-77)||(2979263-2979323)
chr5 (17-77)||(39567341-39567401)
chr5 (16-62)||(8088184-8088230)
chr5 (1-71)||(35850854-35850924)
[»] chr4 (41 HSPs)
chr4 (1-80)||(24099021-24099100)
chr4 (1-79)||(2520855-2520933)
chr4 (1-80)||(13634191-13634270)
chr4 (1-78)||(21686198-21686275)
chr4 (1-79)||(19853467-19853545)
chr4 (1-79)||(22611259-22611337)
chr4 (1-79)||(53811104-53811182)
chr4 (1-79)||(32766590-32766668)
chr4 (1-79)||(54021936-54022014)
chr4 (1-79)||(4142707-4142785)
chr4 (2-79)||(56040601-56040678)
chr4 (1-79)||(10496411-10496489)
chr4 (1-79)||(21662513-21662591)
chr4 (1-79)||(21671277-21671355)
chr4 (1-71)||(26633634-26633704)
chr4 (1-78)||(17949280-17949357)
chr4 (1-78)||(17953132-17953209)
chr4 (16-80)||(35348398-35348462)
chr4 (1-71)||(8670561-8670631)
chr4 (1-79)||(43510273-43510350)
chr4 (16-77)||(52944402-52944463)
chr4 (17-77)||(27652036-27652096)
chr4 (1-80)||(37030337-37030416)
chr4 (1-79)||(26090869-26090947)
chr4 (1-63)||(29960920-29960982)
chr4 (22-80)||(33921151-33921209)
chr4 (1-71)||(53444194-53444264)
chr4 (17-78)||(33332525-33332586)
chr4 (22-63)||(36204350-36204391)
chr4 (22-69)||(45418609-45418656)
chr4 (11-62)||(47320384-47320435)
chr4 (1-71)||(10258859-10258929)
chr4 (26-80)||(35964911-35964965)
chr4 (16-78)||(36161802-36161864)
chr4 (2-80)||(43095705-43095783)
chr4 (9-71)||(56156605-56156667)
chr4 (26-63)||(38166201-38166238)
chr4 (38-79)||(48257587-48257628)
chr4 (1-61)||(9178429-9178489)
chr4 (22-77)||(9048761-9048816)
chr4 (5-79)||(44596743-44596814)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-79)||(32702-32780)
[»] chr8 (41 HSPs)
chr8 (1-79)||(20553194-20553272)
chr8 (1-79)||(20559697-20559775)
chr8 (1-79)||(20571259-20571337)
chr8 (1-79)||(37971341-37971419)
chr8 (1-79)||(7883194-7883272)
chr8 (1-79)||(10377747-10377825)
chr8 (1-79)||(16928710-16928788)
chr8 (2-79)||(23230702-23230779)
chr8 (5-80)||(31013560-31013635)
chr8 (1-79)||(16247176-16247254)
chr8 (1-79)||(17693567-17693645)
chr8 (9-80)||(24186613-24186684)
chr8 (1-80)||(28086765-28086844)
chr8 (1-79)||(14544856-14544934)
chr8 (1-79)||(40211255-40211333)
chr8 (1-80)||(3673499-3673578)
chr8 (24-71)||(7198156-7198203)
chr8 (24-77)||(39657535-39657588)
chr8 (17-76)||(14585751-14585810)
chr8 (16-71)||(33214632-33214687)
chr8 (16-79)||(40619026-40619089)
chr8 (1-66)||(44091722-44091784)
chr8 (1-79)||(33347474-33347552)
chr8 (1-71)||(45445772-45445842)
chr8 (1-69)||(8443474-8443542)
chr8 (17-77)||(42046295-42046355)
chr8 (26-77)||(471121-471172)
chr8 (9-79)||(36948390-36948460)
chr8 (9-71)||(7677244-7677306)
chr8 (16-62)||(15344381-15344427)
chr8 (16-62)||(15433446-15433492)
chr8 (16-62)||(15524750-15524796)
chr8 (16-62)||(29617244-29617290)
chr8 (1-62)||(1236667-1236728)
chr8 (1-62)||(1239367-1239428)
chr8 (17-62)||(18890669-18890714)
chr8 (21-78)||(27110419-27110476)
chr8 (16-80)||(29939373-29939437)
chr8 (17-61)||(43833967-43834011)
chr8 (12-71)||(14916148-14916207)
chr8 (12-71)||(21237859-21237918)
[»] chr3 (56 HSPs)
chr3 (1-78)||(9797490-9797567)
chr3 (1-79)||(21431668-21431746)
chr3 (1-79)||(36461386-36461464)
chr3 (1-79)||(6954651-6954729)
chr3 (1-79)||(7448869-7448947)
chr3 (1-79)||(7457011-7457089)
chr3 (1-79)||(32701546-32701624)
chr3 (1-79)||(52923072-52923150)
chr3 (7-78)||(45568401-45568472)
chr3 (1-79)||(48650689-48650767)
chr3 (1-78)||(40556757-40556834)
chr3 (1-71)||(10229531-10229601)
chr3 (5-79)||(12050603-12050677)
chr3 (1-79)||(21533764-21533842)
chr3 (5-79)||(43488545-43488619)
chr3 (5-79)||(46304475-46304549)
chr3 (5-76)||(38860072-38860143)
chr3 (1-79)||(9998522-9998600)
chr3 (12-78)||(14859556-14859622)
chr3 (1-71)||(35864895-35864965)
chr3 (1-71)||(38545854-38545924)
chr3 (1-79)||(40487381-40487458)
chr3 (1-79)||(54149047-54149124)
chr3 (16-80)||(23799864-23799928)
chr3 (1-69)||(33579935-33580003)
chr3 (16-79)||(19339246-19339309)
chr3 (1-79)||(10108291-10108369)
chr3 (1-79)||(10233125-10233203)
chr3 (1-79)||(12149739-12149817)
chr3 (11-77)||(41818280-41818346)
chr3 (23-77)||(51923804-51923858)
chr3 (11-79)||(21313101-21313169)
chr3 (17-77)||(51303600-51303660)
chr3 (1-80)||(26275773-26275852)
chr3 (16-63)||(43016925-43016972)
chr3 (16-75)||(45424868-45424927)
chr3 (1-63)||(45425647-45425709)
chr3 (1-71)||(47896207-47896277)
chr3 (1-62)||(29922112-29922173)
chr3 (1-62)||(29971265-29971326)
chr3 (16-77)||(35175474-35175535)
chr3 (17-77)||(16235497-16235557)
chr3 (16-79)||(20464925-20464988)
chr3 (15-65)||(19619783-19619833)
chr3 (1-71)||(47042011-47042081)
chr3 (1-71)||(48199832-48199902)
chr3 (17-62)||(8914783-8914828)
chr3 (1-34)||(36910640-36910673)
chr3 (16-77)||(50194292-50194353)
chr3 (1-62)||(53807830-53807891)
chr3 (47-79)||(4711583-4711615)
chr3 (17-77)||(7546686-7546746)
chr3 (17-61)||(21289787-21289831)
chr3 (17-76)||(27706184-27706243)
chr3 (16-71)||(53099860-53099915)
chr3 (26-77)||(53508306-53508357)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-79)||(15548-15626)
[»] scaffold0050 (1 HSPs)
scaffold0050 (2-79)||(65997-66074)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-74)||(71824-71897)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-79)||(50832-50910)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-78)||(71256-71333)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-79)||(1928-2006)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-80)||(9996-10075)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-79)||(8568-8646)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-79)||(31229-31307)
[»] scaffold0347 (1 HSPs)
scaffold0347 (16-77)||(6101-6162)
[»] scaffold0262 (1 HSPs)
scaffold0262 (18-79)||(1774-1835)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-66)||(8126-8188)
[»] scaffold0042 (1 HSPs)
scaffold0042 (26-77)||(92453-92504)
[»] scaffold0128 (1 HSPs)
scaffold0128 (18-80)||(36898-36960)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-77)||(58045-58106)


Alignment Details
Target: chr6 (Bit Score: 75; Significance: 3e-35; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-35
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12170525 - 12170603
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12170525 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccggaagcatgggtatttc 12170603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3913607 - 3913529
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||  |||||||||||||||    
T  3913607 aaagatctacatcaatcaattacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttc 3913529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33053201 - 33053122
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||||||||    
T  33053201 aaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttca 33053122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23128675 - 23128753
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  23128675 aaagatcaacatcagtcaattacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttc 23128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32327250 - 32327180
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| |||||||    
T  32327250 aaagatctacatcaatcaattacaaattcaagcaatgattttgacgttaacgttgcagatccggaagcatg 32327180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 7e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 606261 - 606339
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||  ||||||||||||||||| || ||||||||||||    
T  606261 aaagatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttc 606339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29319911 - 29319834
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||||||||| |||||||||||||||| |||||||||| | |||||||||||| ||||| ||||||| ||||||    
T  29319911 aaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattt 29319834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 68034 - 67956
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| ||| |||||| | || ||||||||||||||| || ||||||||||||    
T  68034 aaagatctacatcagtcaattacaaattcaaccaacgatttgtacgttaacgttgcagatccggaaacatgggtatttc 67956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29255479 - 29255401
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||| ||||| |||||||||||||||| |||||||||||  ||||||||| |||||||| || ||||||||||||    
T  29255479 aaagatcttcatcagtcaattacaaattcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttc 29255401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30608548 - 30608470
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||| | |||||||||||||||| ||||||||||| ||||||||||||||||| | || ||||||||||||    
T  30608548 aaagatcgacataagtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttc 30608470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 127726 - 127804
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||||| | |||||||||||  ||||||||||||||| || ||||||| |||||||    
T  127726 aaagatcgacatcagtcaattacaaattcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtatttc 127804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 4010535 - 4010467
Alignment:
Q  11 atcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||| ||||||||||| |||  |||||||||||||| ||||||| |||||||    
T  4010535 atcaatcaattacatattcaatcaatgatttgggtgttgacgttgcagatccggaagcatgagtatttc 4010467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 3355182 - 3355253
Alignment:
Q  9 acatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||| ||||||| ||||||||  ||||||||||| |||||| ||||||||||| ||||||| ||||||||    
T  3355182 acatcagtcaattataaattcaatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttca 3355253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 7515231 - 7515160
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtat 76  Q
    |||||||||| |||||||||||||||| ||||||||| |  |||||||||||| ||||| ||||||| ||||    
T  7515231 atctacatcactcaattacaaattcaaccaatgatttaggcgtcaacgttgcaaatccggaagcatgtgtat 7515160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 30894657 - 30894728
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgg 72  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  ||||||||| |||||||  ||||||||    
T  30894657 aaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttacagatccagaagcatgg 30894728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 34018617 - 34018696
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||| | |||| | ||||||||||||||  ||||||||||  |||||||||||||||||| ||||||| ||||||||    
T  34018617 aaagatcgagatcagttaattacaaattcaactaatgatttgggcgtcaacgttgcagatccggaagcatgagtatttca 34018696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1933725 - 1933663
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccg 63  Q
    ||||||| || ||||||||| ||| |||||| |||||||||||| ||||||||||||||||||    
T  1933725 aaagatcaacttcaatcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccg 1933663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30493589 - 30493666
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||| || ||| |||||  || |||||| |||||||||||| |||||||||||| ||||| ||||||||||||||    
T  30493589 aaagatcaacttcagtcaatctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattt 30493666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 546111 - 546164
Alignment:
Q  24 aaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||||| |||||||||||  |||||||||||||||||  |||||||||||||    
T  546111 aaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtatt 546164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26588505 - 26588428
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||| || ||| ||||| ||| ||||||  |||||||||||||||||||||||| ||||  ||||||| ||||||    
T  26588505 aaagatcaacttcagtcaatcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtattt 26588428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 32191748 - 32191693
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||| ||| |||||| |||||||||||| | |||||||||| |||||||||||||    
T  32191748 tcaatcacatattcaatcaatgatttggacgccaacgttgcatatccgaaagcatg 32191693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 1523491 - 1523541
Alignment:
Q  27 ttcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| |||||||||| | |||||||||||||||||  |||||||||||||    
T  1523491 ttcaatcaatgatttgaacgtcaacgttgcagatccagaagcatgggtatt 1523541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 7976206 - 7976144
Alignment:
Q  15 atcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||| ||| ||||||  ||| ||||||| |||||||||| ||||||| |||||||||||||    
T  7976206 atcaatcacagattcaattaattatttggacgtcaacgttgtagatccggaagcatgggtatt 7976144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 28981249 - 28981311
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||| ||| |||||| ||||||| | || |||||| ||||||||||||||| ||||||||||    
T  28981249 tcaatcacagattcaatcaatgatcttgacgtcaacattgcagatccgaaagtatgggtattt 28981311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 14801900 - 14801945
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||    
T  14801900 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcc 14801945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 27097650 - 27097598
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||| |||||||||||| |||||| ||||| |||||||| ||||| |||||    
T  27097650 attcaatcaatgatttggacgtcaacattgcaaatccgaaaacatggatattt 27097598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 33543600 - 33543561
Alignment:
Q  38 atttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||| |||||| |||||||||||| |||||||||||||    
T  33543600 atttgggtgtcaatgttgcagatccggaagcatgggtatt 33543561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 35001677 - 35001716
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatccgaa 65  Q
    |||||| ||| |||||||| ||||||||||||||||||||    
T  35001677 attcaatcaaagatttggacgtcaacgttgcagatccgaa 35001716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 3e-35; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 3e-35
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35484424 - 35484346
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35484424 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttc 35484346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7337696 - 7337618
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  7337696 aaagatctacatcaatcaattacaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttc 7337618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32395057 - 32395135
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  32395057 aaagatctacatcattcaattacaaattcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttc 32395135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45415617 - 45415695
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  45415617 aaagatctacatcaatcaattacaaactcaagcaatgatttggacgtcaacgttgcagatccggaagcataggtatttc 45415695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49504628 - 49504558
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  49504628 aaagatctacatcaatcaattacaaactcaaacaatgatttggatgtcaacgttgcagatccggaagcatg 49504558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5983895 - 5983973
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||  ||||||| |||||||||| |||||||||||||||    
T  5983895 aaagatctacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttc 5983973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21947651 - 21947581
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  21947651 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatg 21947581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14872698 - 14872775
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||    
T  14872698 aaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattt 14872775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1742340 - 1742410
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  |||||||||||||||||||||| |||||||||||  |||||||||| |||||||||||||||    
T  1742340 aaagatcggcatcaatcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatg 1742410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44915698 - 44915776
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  ||||| |||||||||||| ||||||| |||||||    
T  44915698 aaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttc 44915776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 35462080 - 35462004
Alignment:
Q  3 agatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||| ||||||||||||| || |||||||| ||| |||||||||||||||||| ||||||| |||||||    
T  35462080 agatctatatcagtcaattacaaattaaaccaatgattcggacgtcaacgttgcagatccggaagcatgtgtatttc 35462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8211943 - 8211865
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||| |||| ||||||||||| ||||||| |||  ||||| |||||||||||| ||||||||||||||||    
T  8211943 aaagatctacatcagtcaaatacaaattcaaccaatgatctggc-gtcaatgttgcagatccggaagcatgggtatttca 8211865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3228328 - 3228406
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| | |||| |||||||||||| ||| |||||||||||  ||||||||||||||||||||| ||||| ||||||    
T  3228328 aaagatcgatatcagtcaattacaaatacaatcaatgatttgggcgtcaacgttgcagatccgaaatcatggatatttc 3228406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10776494 - 10776416
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||| ||| |||||||||||| |||||| ||||||||||  ||||||| |||||||    
T  10776494 aaagatcgacatcagtcaattacaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttc 10776416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 13144832 - 13144766
Alignment:
Q  14 aatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||||||| |||||||||||| |||||  ||||||||| ||||||||| ||||||||    
T  13144832 aatcaattacaaattcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttca 13144766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 29738696 - 29738618
Alignment:
Q  2 aagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||||||||| |||||||||||||||| |||||| ||||  ||||| |||||| ||||| ||||||| ||||||||    
T  29738696 aagatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaatgttgcaaatccggaagcatgtgtatttca 29738618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 24597342 - 24597281
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||||| |||||||| |||||||||||| |||||||||| ||||||| |||||||||||||    
T  24597342 tcaattataaattcaatcaatgatttggacgtcaacgttgtagatccggaagcatgggtatt 24597281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34878311 - 34878241
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  |||||||||| ||||||| |||||||    
T  34878311 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatg 34878241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 51916683 - 51916620
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||| ||||||||||   ||||||||||||||| || ||||||| |||||||    
T  51916683 tcaattacaaattcaatcaatgatttgagcgtcaacgttgcagatacggaagcatgagtatttc 51916620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6217860 - 6217790
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| || ||| ||||| |||||||||| ||||||||||||||||||| ||||| ||| | |||||||    
T  6217860 aaagatcaacttcagtcaatcacaaattcaatcaatgatttggatgtcaacattgcatatctgtaagcatg 6217790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7836829 - 7836775
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttg 55  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  ||||||||||    
T  7836829 aaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 7836775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23291675 - 23291605
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| |||||||||||   ||||||||| ||||||| |||||||    
T  23291675 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcatcaacgttgaagatccggaagcatg 23291605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27580161 - 27580083
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| || ||| | ||||||||||||||  ||||||||||  |||||| |||||||| |||||||||| |||||||    
T  27580161 aaagatcgacttcagtaaattacaaattcaataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttc 27580083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18939378 - 18939455
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||| || ||| ||||||||| ||| || |||||||||||| ||| |||||||||||| | ||||||| ||||||    
T  18939378 aaagatcaacttcagtcaattacagatttaatcaatgatttggacgtcgacgttgcagatctggaagcatgtgtattt 18939455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 15431683 - 15431639
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatc 61  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||    
T  15431683 caattacaaattcaatcaatgatttgggcgtcaacgttgcagatc 15431639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26535408 - 26535484
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||||| | |||||| |||||||| || || |||||||||||   ||||||||||||||||| ||||||| |||||    
T  26535408 aaagatcgaaatcaataaattacaatttaaatcaatgatttgggcttcaacgttgcagatccggaagcatgagtatt 26535484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 37720166 - 37720106
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||   ||||||||||  ||||||||||||||||| ||||||||||||||    
T  37720166 caatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagcatgggtatt 37720106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 48750260 - 48750320
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| ||||||| || |||||||||||  |||||||||||||||||  |||||||||||||    
T  48750260 caatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggtatt 48750320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 49626987 - 49627031
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagat 60  Q
    ||||| |||||||||| |||||||||||| |||||||||||||||    
T  49626987 tcaatcacaaattcaatcaatgatttggacgtcaacgttgcagat 49627031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 31984247 - 31984298
Alignment:
Q  28 tcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||| |||||||||||  |||||||||||| ||||| |||||||||||||||    
T  31984247 tcaatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttc 31984298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 36775727 - 36775668
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtat 76  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||  || |||||||||    
T  36775727 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtat 36775668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 24583024 - 24583070
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  24583024 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 24583070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31919047 - 31919117
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| |||||| |||||||||| ||||| ||||||||||    ||||||||||||||||  |||||||    
T  31919047 aaagatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgttgcagatccagaagcatg 31919117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 43412444 - 43412510
Alignment:
Q  12 tcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||||  || |||||| |||||||||| | |||||||||||||||||  ||||||| ||||||    
T  43412444 tcaatcaatcgcatattcaatcaatgatttgaaagtcaacgttgcagatccagaagcatgcgtattt 43412510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 44543346 - 44543392
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  44543346 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 44543392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 21686941 - 21687002
Alignment:
Q  10 catcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||| ||||||| |||||||| |||||||||||  |||||| ||| ||||||| |||||||    
T  21686941 catcactcaattaaaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatg 21687002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 45789613 - 45789670
Alignment:
Q  14 aatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||||||| |||||| |||||||||||  ||| |||||| ||||||| |||||||    
T  45789613 aatcaattacagattcaatcaatgatttgggcgtcgacgttgtagatccggaagcatg 45789670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 47132977 - 47133038
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| ||| |||||| | |||||||||| |||||| ||||||||||| ||||||| |||||    
T  47132977 tcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtatt 47133038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36894302 - 36894262
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgattt 41  Q
    |||||||||||||| |||||||||||||||| |||| ||||    
T  36894302 aaagatctacatcagtcaattacaaattcaaccaataattt 36894262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 31692485 - 31692434
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaag 67  Q
    ||||| ||||||| || ||||||||| |||||||| |||| |||||||||||    
T  31692485 tcaataacaaatttaatcaatgatttcgatgtcaatgttgtagatccgaaag 31692434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39888241 - 39888304
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccga 64  Q
    ||||||| || ||| |||||||||| ||||| |||||||||||  ||| |||||| ||||||||    
T  39888241 aaagatcgacttcagtcaattacaacttcaatcaatgatttgggcgtccacgttgtagatccga 39888304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 65
Target Start/End: Complemental strand, 39927532 - 39927505
Alignment:
Q  38 atttggatgtcaacgttgcagatccgaa 65  Q
    ||||||||||||||||||||||||||||    
T  39927532 atttggatgtcaacgttgcagatccgaa 39927505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 8e-33; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 8e-33
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 39171623 - 39171545
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  39171623 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 39171545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 3e-32
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9450170 - 9450093
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  9450170 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattt 9450093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48316845 - 48316767
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  48316845 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgctgcagatccggaagcatgggtatttc 48316767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19296928 - 19297006
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  19296928 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 19297006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 12141340 - 12141263
Alignment:
Q  2 aagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  12141340 aagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 12141263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8001579 - 8001501
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||| |||||||    
T  8001579 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagattcggaatcatgagtatttc 8001501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28062256 - 28062190
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaag 67  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  28062256 aaagatctacatcaatcaattataaattcaagcaatgatttggacgtcaatgttgcagatccgaaag 28062190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34899640 - 34899562
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||| || || |||||||||||||||    
T  34899640 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttc 34899562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 28044789 - 28044711
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||| |||||||||||| ||||||||||| ||||||| | |||||||||||||||||| || ||||||||||||    
T  28044789 aaagatctatatcaatcaattataaattcaagcattgatttgaacgtcaacgttgcagatccggaaacatgggtatttc 28044711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 7e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30756852 - 30756774
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||| |||||||  ||||||||||||||||| ||||||| |||||||    
T  30756852 aaagatctacatcagtcaattacaaattcaaccaataatttggacatcaacgttgcagatccggaagcatgagtatttc 30756774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37837491 - 37837421
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  |||||||||||||||||| |||||||    
T  37837491 aaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatg 37837421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42978668 - 42978746
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| ||||| |||||||||| |||||||||||  |||||||||||||||||| ||| |||||||||||    
T  42978668 aaagatcgacatcagtcaataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttc 42978746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47590369 - 47590447
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||  |||||||||||||||| |||||||||||  |||||||||||| ||||| ||||||| |||||||    
T  47590369 aaagatctacatccgtcaattacaaattcaaccaatgatttgggcgtcaacgttgcacatccggaagcatgagtatttc 47590447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39328823 - 39328753
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  |||||||||| |||||||||||||||    
T  39328823 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatg 39328753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 40993215 - 40993293
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| ||||||||||||||||  || ||||||||| ||||||||||| || |  |||||||||||||||    
T  40993215 aaagatctacatcagtcaattacaaattcaacaaaagatttggatttcaacgttgcatattcagaagcatgggtatttc 40993293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 19404775 - 19404711
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||||| |||||||||||  ||||| |||||||||||| ||||||| ||||||||    
T  19404775 tcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttca 19404711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48061480 - 48061558
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||| | |||||||||||||||| ||||| ||||   |||||||||||||||||  ||||||| |||||||    
T  48061480 aaagatctacattagtcaattacaaattcaaccaatggtttgagcgtcaacgttgcagatccttaagcatgagtatttc 48061558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5792854 - 5792923
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcat 70  Q
    ||||||| |||||| |||||||||| || || |||||||||||| |||||||||||||||| | ||||||    
T  5792854 aaagatcgacatcagtcaattacaagttaaatcaatgatttggacgtcaacgttgcagatctggaagcat 5792923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13796962 - 13796885
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||| |||||| ||||| ||||| |||| ||||||||||   |||||||||||||||||| ||||||| ||||||    
T  13796962 aaagatcgacatcagtcaataacaaagtcaaccaatgatttgaccgtcaacgttgcagatccggaagcatgagtattt 13796885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 24350856 - 24350796
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||  |||||||||||||    
T  24350856 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtatt 24350796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 35133021 - 35133081
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||  ||||||||||||||||| |||||||| |||||    
T  35133021 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtatt 35133081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 11343883 - 11343933
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaa 66  Q
    ||||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  11343883 tcaattacaaatttaattaatgatttggacgtcaacgttgcagatccgaaa 11343933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 25287211 - 25287141
Alignment:
Q  9 acatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||||||||||| ||||||||||   |||||  || |||||| |||||||||| ||||||    
T  25287211 acatcaatcaattacaaattcaatcaatgatttgagcgtcaatattacagatctgaaagcatggatatttc 25287141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38798839 - 38798909
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  |||||| ||| ||||||| |||||||    
T  38798839 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatg 38798909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 38880596 - 38880534
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||| |||||||||| ||||||||||| || |||||||||||||| | ||||||| ||||||    
T  38880596 tcaatcacaaattcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgtattt 38880534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 46700101 - 46700171
Alignment:
Q  9 acatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||| |||| ||||||||||| |||||||||||   ||| ||||||||||||| |||||||| ||||||    
T  46700101 acatcagtcaactacaaattcaatcaatgatttgggcatcagcgttgcagatccggaagcatggatatttc 46700171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 45349823 - 45349762
Alignment:
Q  10 catcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||| |||||||||||||||||||||||||| |  |||||| ||||||||| | |||||||    
T  45349823 catcagtcaattacaaattcaagcaatgattttggcgtcaacattgcagatctggaagcatg 45349762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 5348614 - 5348546
Alignment:
Q  12 tcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||||||||| |||||| |||||||||||  ||| ||||||||||| |||||  ||| ||||||||    
T  5348614 tcaatcaattacagattcaatcaatgatttgggcgtcgacgttgcagattcgaaaatatgtgtatttca 5348546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 5078432 - 5078370
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||| |||| |||||  ||||||||||| |||||| ||||| ||||||||||||| ||||||    
T  5078432 tcaatcacaagttcaataaatgatttggacgtcaactttgcatatccgaaagcatgagtattt 5078370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22087375 - 22087429
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttg 55  Q
    ||||||| || ||| |||||||||||||||| |||||| |||| |||||||||||    
T  22087375 aaagatcaacttcagtcaattacaaattcaatcaatgacttgggtgtcaacgttg 22087429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24770304 - 24770374
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| ||||| |||||||||| |||||||||||  |||||||||| ||||||  |||||||    
T  24770304 aaagatcggcatcagtcaatcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagcatg 24770374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 1448820 - 1448783
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatccg 63  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  1448820 attcaatcaaagatttggatgtcaacgttgcagatccg 1448783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9977239 - 9977186
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgtt 54  Q
    ||||||| || ||| |||||||||||||||| |||||||||||  |||||||||    
T  9977239 aaagatcgacttcagtcaattacaaattcaaacaatgatttgggcgtcaacgtt 9977186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 22743018 - 22743078
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| ||||||||||   |||||||||||||||||  ||||||| |||||    
T  22743018 caatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagtatt 22743078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 28476301 - 28476361
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||  |||||||||||  |||||||||||||||||  ||| |||||||||    
T  28476301 caatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggtatt 28476361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 5000047 - 4999992
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||||||||| |||| |||||||  |||||||||| |||| | |||||||    
T  5000047 tcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatg 4999992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29844922 - 29844970
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaac 51  Q
    ||||||| |||||||||| ||||||||||||   |||||||||||||||||    
T  29844922 aaagatcgacatcaatcagttacaaattcaa--tatgatttggatgtcaac 29844970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39229072 - 39229151
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||| || ||| ||||||||| |||||| | |||| ||||  ||| |||||||||||| | ||||||| ||||||||    
T  39229072 aaagatcaacttcagtcaattacagattcaaccgatgacttgggcgtcgacgttgcagatctggaagcatgtgtatttca 39229151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 8e-33; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 8e-33
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1421742 - 1421820
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  1421742 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 1421820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 8e-33
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7677907 - 7677829
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  7677907 aaagatctacatcaatcaattacaaattcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttc 7677829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 8e-33
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31210641 - 31210563
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  31210641 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttc 31210563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 5e-31
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 31788522 - 31788601
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  31788522 aaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttca 31788601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4778819 - 4778897
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  4778819 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 4778897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19062386 - 19062308
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  19062386 aaagatctacatcagtcaattacaaattcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttc 19062308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9169292 - 9169214
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| | ||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||||    
T  9169292 aaagatctacatcagtgaattacaaattcaacgaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 9169214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 33585765 - 33585699
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  33585765 atctacctcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatg 33585699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38445232 - 38445310
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| | |||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||||    
T  38445232 aaagatctacatcagtaaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcgtgggtatttc 38445310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 37876639 - 37876562
Alignment:
Q  2 aagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||| |||||||||||||||| |||||| ||||   |||||||||||||||||||||||||||||||||    
T  37876639 aagatctacatcagtcaattacaaattcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttc 37876562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-22
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 29173740 - 29173676
Alignment:
Q  15 atcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  29173740 atcaattacaaattcaatcaattatttgggtgtcaacgttgcagatccgaaagcatgggtatttc 29173676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7448313 - 7448392
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||| ||||||||| |||||| |||| ||||||| |||||||||||||||||| ||||||| ||||||||    
T  7448313 aaagatctacatcagtcaattacatattcaaccaataatttggacgtcaacgttgcagatccggaagcatgagtatttca 7448392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27097440 - 27097369
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgg 72  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||| | ||||||||    
T  27097440 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatctggaagcatgg 27097369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30400069 - 30399992
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||| || ||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||||||    
T  30400069 aaagatcaacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcagatccgaaagcatgagtattt 30399992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4041628 - 4041550
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||| ||||| | |||||| |||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  4041628 aaagatttacattagtcaattgcaaactcaaccaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttc 4041550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7646539 - 7646622
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatg-----atttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||     ||||||| |||||||||||||||||| ||||||| |||||||    
T  7646539 aaagatctacatcagtcaattacaaattcaatcaatgatttaatttggacgtcaacgttgcagatccggaagcatgagtatttc 7646622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 36691955 - 36692010
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  36691955 tcaattacaaattcaagcaatgatttggacgtcaacattgcagatcctaaagcatg 36692010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4904179 - 4904101
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| ||||||||||||||||   ||||||||| ||||||||||||||||||  |||||||| ||||||    
T  4904179 aaagatcgacatcagtcaattacaaattcaactgatgatttgggtgtcaacgttgcagatccagaagcatggatatttc 4904101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25509102 - 25509024
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||||||| ||||||| |||  |||||||||||| ||||| || ||||||||||||    
T  25509102 aaagatcaacatcagtcaattacaaattcaatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttc 25509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33923771 - 33923841
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  |||||||||| ||||||| |||||||    
T  33923771 aaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatg 33923841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35220391 - 35220469
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| || ||||||||||||| |||||||||||  |||||| |||||||||  ||||||||||||||||    
T  35220391 aaagatcaacatcagtccattacaaattcaaccaatgatttgggcgtcaactttgcagatcttaaagcatgggtatttc 35220469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36943155 - 36943077
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||| | || ||||||||||| | |||||||||||  |||||||||||||||||| || ||||||||||||    
T  36943155 aaagatctacattagtcgattacaaattccaccaatgatttgggcgtcaacgttgcagatccggaaacatgggtatttc 36943077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 31128804 - 31128735
Alignment:
Q  11 atcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||| |||||||||||||||| ||||||||| |  |||||||||||||||||| ||||||| ||||||||    
T  31128804 atcagtcaattacaaattcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttca 31128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 10237234 - 10237174
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||  |||||||||||||    
T  10237234 caatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtatt 10237174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1415623 - 1415693
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  |||||||||| ||||||| |||||||    
T  1415623 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatg 1415693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18763534 - 18763604
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  |||||||||||||||||||||| |||| ||||||  ||||||||| |||||||| |||||||    
T  18763534 aaagatcggcatcaatcaattacaaattcaaccaatcatttgggcgtcaacgttacagatccggaagcatg 18763604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8809346 - 8809425
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||| |||||| |||||||||| ||||| |||||||||||  | |||| ||||||||||| ||||||| | ||||||    
T  8809346 aaagatcgacatcagtcaattacaagttcaatcaatgatttgggcgccaacattgcagatccggaagcatgagaatttca 8809425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 12677469 - 12677414
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||||||||| |||||||||||  |||||||||| ||||||| |||||||    
T  12677469 tcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatg 12677414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41327569 - 41327644
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtat 76  Q
    |||||||||  ||| |||||||||||||||| |||||||||||| |||||| || |||||||  || |||||||||    
T  41327569 aaagatctatttcagtcaattacaaattcaaccaatgatttggacgtcaacattacagatccataaacatgggtat 41327644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42698735 - 42698660
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtat 76  Q
    ||||||| |||||| | |||||||||||||| || ||||||||| |||| ||||||||||||| || |||| ||||    
T  42698735 aaagatcgacatcagtgaattacaaattcaatcagtgatttggacgtcagcgttgcagatccgtaaacatgagtat 42698660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 5427901 - 5427824
Alignment:
Q  2 aagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||||||||| ||||| |||||||||| |||||| |||   |||||||||||||||||| ||| ||| ||||||||    
T  5427901 aagatctacatcagtcaat-acaaattcaaccaatgacttgtgcgtcaacgttgcagatccggaagtatgtgtatttca 5427824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 10929746 - 10929807
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| ||| |||||| ||||||||||||  ||||||||||||||||| ||||||| |||||    
T  10929746 tcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtatt 10929807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 17994743 - 17994686
Alignment:
Q  22 acaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||| |||||||||||| |||||||||||| ||||| || ||| ||||||||    
T  17994743 acaaattcaatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttc 17994686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36175530 - 36175477
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgtt 54  Q
    ||||||| ||||||| |||||||| |||||| |||||||||||| |||||||||    
T  36175530 aaagatcaacatcaaacaattacatattcaatcaatgatttggacgtcaacgtt 36175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 3309027 - 3309087
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||  || ||||||||||||||  |||||||||||||    
T  3309027 caatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggtatt 3309087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 11985252 - 11985188
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||||||| |||| ||||||||| | ||||||||||||||||||  ||| ||| ||||||||    
T  11985252 tcaattacaaactcaaccaatgatttaggtgtcaacgttgcagatccagaagaatgagtatttca 11985188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 77
Target Start/End: Original strand, 17319432 - 17319463
Alignment:
Q  46 gtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||||||||||||||||||||||||||||||    
T  17319432 gtcaacgttgcagatccgaaagcatgggtatt 17319463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 29574647 - 29574592
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||| ||| |||||| |||||||||||| | |||||||||||||||| |||||||    
T  29574647 tcaatcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatg 29574592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 4100417 - 4100459
Alignment:
Q  7 ctacatcaatcaattacaaattcaagcaatgatttggatgtca 49  Q
    |||||||| |||||||||||||||| |||||||||||| ||||    
T  4100417 ctacatcagtcaattacaaattcaaccaatgatttggacgtca 4100459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 17249166 - 17249120
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  17249166 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 17249120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19028948 - 19028870
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| || ||| |||| ||||||||||| ||||||||||   |||||||||||| ||||  |||||||| ||||||    
T  19028948 aaagatcgacttcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttgcaaatccagaagcatggatatttc 19028870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 32448638 - 32448592
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  32448638 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 32448592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 16484707 - 16484658
Alignment:
Q  12 tcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatc 61  Q
    ||||||||||||||||||||  ||||| || |||||||||| ||||||||    
T  16484707 tcaatcaattacaaattcaattaatgactttgatgtcaacgctgcagatc 16484658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 37416791 - 37416852
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||||  ||| ||||||| |||||    
T  37416791 tcaatcacagattcaatcaatgatttggatgtcaacattgcaggcccggaagcatgtgtatt 37416852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 11833558 - 11833614
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgg 72  Q
    |||||||||| || || ||||||| ||||  ||||||||||||||||||||| ||||    
T  11833558 tcaattacaagttaaatcaatgatctggacatcaacgttgcagatccgaaagtatgg 11833614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 17151504 - 17151568
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagca-tgggtatttc 79  Q
    ||||||||| |||||| |||||||||||  ||| |||||| ||||||| ||||| ||||||||||    
T  17151504 tcaattacagattcaatcaatgatttgggcgtcgacgttgtagatccggaagcattgggtatttc 17151568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 62
Target Start/End: Original strand, 18113968 - 18113996
Alignment:
Q  34 aatgatttggatgtcaacgttgcagatcc 62  Q
    |||||||||||||||||||||||||||||    
T  18113968 aatgatttggatgtcaacgttgcagatcc 18113996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 41431119 - 41431155
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  41431119 attcaatcaaagatttggatgtcaacgttgcagatcc 41431155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 29279601 - 29279542
Alignment:
Q  4 gatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccg 63  Q
    |||| |||||| || ||||||||||||| ||||||||||   ||||| ||||||||||||    
T  29279601 gatcaacatcagtcgattacaaattcaatcaatgatttgtgcgtcaatgttgcagatccg 29279542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 5e-31; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 5e-31
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 11073929 - 11073854
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  11073929 atctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttacagatccgaaagcatgggtatttca 11073854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 38597852 - 38597931
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  38597852 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttca 38597931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13007284 - 13007362
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  13007284 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 13007362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34945448 - 34945526
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  34945448 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 34945526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24229817 - 24229739
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||| ||||||    
T  24229817 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaatgttgcagatccggtagcatggatatttc 24229739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6012171 - 6012092
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||| |||||||||||||||| |||||||||||| ||||| |||| ||||||| ||||||||||||||||    
T  6012171 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaatgttgtagatccggaagcatgggtatttca 6012092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6216953 - 6217031
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||| || ||||||| |||||||    
T  6216953 aaagatctacatcaatcaattacaaattcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttc 6217031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9113758 - 9113680
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||| | ||||||    
T  9113758 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatagatatttc 9113680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7036274 - 7036352
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||| | ||||||||||||| || | |||||||||  ||||||||||||||||||||||||||||||||||    
T  7036274 aaagatcgacataagtcaattacaaattgaatctatgatttgggcgtcaacgttgcagatccgaaagcatgggtatttc 7036352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25980213 - 25980291
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||| ||||||||||| |||||||||||  ||||| ||||||||| || |||||||||||||||    
T  25980213 aaagatcaacatcagtcaactacaaattcaaccaatgatttgggcgtcaaagttgcagattcggaagcatgggtatttc 25980291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 15571561 - 15571620
Alignment:
Q  21 tacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  15571561 tacaaattcaatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttca 15571620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1409553 - 1409623
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| ||||||||||||||||||||||| |||||||||    ||||| ||||||||||||||| ||||    
T  1409553 aaagatcgacatcaatcaattacaaattcaatcaatgatttatgcgtcaatgttgcagatccgaaaacatg 1409623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10722816 - 10722894
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| || ||| ||| ||| |||||||| |||||||||||  |||||||||| |||||| ||||||||||||||||    
T  10722816 aaagatcgacttcagtcatttaaaaattcaatcaatgatttgggcgtcaacgttgtagatccaaaagcatgggtatttc 10722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13421988 - 13422066
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  ||||| ||||||||| |  ||||||| |||||||    
T  13421988 aaagatcgacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttc 13422066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14726494 - 14726424
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| ||||| |||||||||| ||||||||||| ||||||||||| ||||||| |||||||    
T  14726494 aaagatcggcatcagtcaatcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagcatg 14726424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31391786 - 31391708
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  |||||||||||||||||  ||| ||| |||||||    
T  31391786 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttc 31391708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38007413 - 38007483
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| ||||||||||||| || |||||||||||| |||||||||| ||||||| |||||||    
T  38007413 aaagatcggcatcagtcaattacaaatttaaccaatgatttggacgtcaacgttgaagatccggaagcatg 38007483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41630557 - 41630635
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| || ||| |||||||||||||||| |||||||||||  |||||||||||| ||||  ||||||| |||||||    
T  41630557 aaagatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagcatgtgtatttc 41630635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7930232 - 7930309
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||| || ||| |||||||||||||||| ||||||||||   ||||| |||||||||||| ||||||| ||||||    
T  7930232 aaagatcgacgtcagtcaattacaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtattt 7930309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26878141 - 26878064
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||| |||||| ||||||| | |||||| |||||||||||  |||||| ||||||||||  ||||||||||||||    
T  26878141 aaagatcgacatcagtcaattagatattcaatcaatgatttgggcgtcaacattgcagatccagaagcatgggtattt 26878064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 28540923 - 28540862
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||  ||||||||||||||    
T  28540923 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattt 28540862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 14082414 - 14082350
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||| ||| ||| |||||||   ||||||||||||||||| ||||||||||||||||    
T  14082414 tcaattacaaatccaaccaaagatttgggcatcaacgttgcagatccggaagcatgggtatttca 14082350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 14211298 - 14211358
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||| ||| |||||||||||| |||||||||||||||||  |||||||||||||    
T  14211298 caatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtatt 14211358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26825485 - 26825555
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||||||| |||||||||||||||| |||||||||| | |   |||||||||||||  |||||||    
T  26825485 aaagatctacatcagtcaattacaaattcaaccaatgatttgtacgattacgttgcagatccataagcatg 26825555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 35921018 - 35920960
Alignment:
Q  12 tcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcat 70  Q
    ||||||||| ||| |||||| |||||||||| | |||||||||||||||||| ||||||    
T  35921018 tcaatcaatcacagattcaatcaatgatttgaacgtcaacgttgcagatccggaagcat 35920960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 11976959 - 11976898
Alignment:
Q  10 catcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||| |||||||||||||||| |||||||||||| || ||||||| ||||| | |||||||    
T  11976959 catcagtcaattacaaattcaaccaatgatttggacgtgaacgttgaagatctggaagcatg 11976898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 2979323 - 2979263
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||  ||||| |||||||    
T  2979323 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggtatt 2979263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 39567341 - 39567401
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||| |||||| ||||||||||  || ||||||||||    
T  39567341 caatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtatt 39567401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 8088230 - 8088184
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  8088230 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 8088184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35850854 - 35850924
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| ||||||||||   |||||||||| ||||||  |||||||    
T  35850854 aaagatcggcatcagtcaattacaaattcaaccaatgatttgtgcgtcaacgttgaagatccagaagcatg 35850924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 5e-31; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 5e-31
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24099100 - 24099021
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||    
T  24099100 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgggtatttca 24099021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2520855 - 2520933
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  2520855 aaagatctacatcaatcaattacaaattaaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 2520933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13634191 - 13634270
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || |||||||||||||    
T  13634191 aaagatctacatcaatcaattacaaattcaagcaacgatttggacgtcaacgttgcagatccggaaacatgggtatttca 13634270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21686275 - 21686198
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  21686275 aaagatctacatcaatcagttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtattt 21686198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19853545 - 19853467
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||||    
T  19853545 aaagatctacatcactcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttc 19853467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22611259 - 22611337
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||    
T  22611259 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttc 22611337  T

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Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 53811104 - 53811182
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||    
T  53811104 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttc 53811182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32766590 - 32766668
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||||| || ||||||||||||    
T  32766590 aaagatctacatcagtcaattacaaattcaatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttc 32766668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 54021936 - 54022014
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  54021936 aaagatcgacatcagtcaattacaaattgaatcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttc 54022014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 7e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4142785 - 4142707
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||  || |||| |||||||    
T  4142785 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttc 4142707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 56040678 - 56040601
Alignment:
Q  2 aagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||| |||||||||||||||| |||||||||||  | |||||||||||||||  |||||||||||||||    
T  56040678 aagatctacatcagtcaattacaaattcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttc 56040601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10496411 - 10496489
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  |||||| ||||||||||| |||||||||||||||    
T  10496411 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttc 10496489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21662513 - 21662591
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||| ||| ||||||||||   |||||||||||||||||| |||||||||||||||    
T  21662513 aaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttc 21662591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21671277 - 21671355
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||| ||| ||||||||||   |||||||||||||||||| |||||||||||||||    
T  21671277 aaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttc 21671355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26633704 - 26633634
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||||||| || ||||||||||||| |||||||||||| ||||| |||||||||||| |||||||    
T  26633704 aaagatctacatcagtcgattacaaattcaaccaatgatttggacgtcaatgttgcagatccggaagcatg 26633634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17949357 - 17949280
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||||||||| |||||||||||||||| |||||||| |   |||||||||||||||||| ||| ||||||||||    
T  17949357 aaagatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattt 17949280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17953209 - 17953132
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||||||||| |||||||||||||||| |||||||| |   |||||||||||||||||| ||| ||||||||||    
T  17953209 aaagatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattt 17953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 35348398 - 35348462
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| | ||||||    
T  35348398 tcaattacaaattcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttca 35348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8670561 - 8670631
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  |||||||||| |||||||||||||||    
T  8670561 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatg 8670631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43510273 - 43510350
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| ||| ||||||||| ||  ||||||||||| ||||| |||||||||||  |||||||||||||||    
T  43510273 aaagatctacatcagtca-ttacaaattaaactaatgatttggacgtcaatgttgcagatcctgaagcatgggtatttc 43510350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 52944402 - 52944463
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| ||| |||||| | |||||||||| |||||||||||||||||| |||||||||||||    
T  52944402 tcaatcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtatt 52944463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 27652036 - 27652096
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| ||||||||||| | ||||||||||||||||  |||||||||||||    
T  27652036 caatcacaaattcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggtatt 27652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37030337 - 37030416
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||| || |||||||| |||| |||||| ||||||||||||  || ||||||||||||  ||| |||||||||||||    
T  37030337 aaagatcaacttcaatcaaatacagattcaatcaatgatttggacatcgacgttgcagatcgaaaaacatgggtatttca 37030416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26090947 - 26090869
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| ||||||| ||||||||  ||||||||||  |||||||||||| || || |||||| ||||||||    
T  26090947 aaagatcgacatcagtcaattataaattcaactaatgatttgggcgtcaacgttgcaaattcggaagcattggtatttc 26090869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29960982 - 29960920
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccg 63  Q
    |||||||||||||||||||||| |||||||| | ||||||| |   |||||||||||||||||    
T  29960982 aaagatctacatcaatcaattataaattcaaccgatgattttggcatcaacgttgcagatccg 29960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 33921151 - 33921209
Alignment:
Q  22 acaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||| |||| |||||   |||||||||||||||||| ||||||||||||||||    
T  33921151 acaaattcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttca 33921209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 53444194 - 53444264
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  ||||| |||| ||||||| |||||||    
T  53444194 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaagcatg 53444264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 33332586 - 33332525
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||| ||| |||||| |||||||||||| ||||||||||||||||| |||| ||||| ||||    
T  33332586 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattt 33332525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 36204391 - 36204350
Alignment:
Q  22 acaaattcaagcaatgatttggatgtcaacgttgcagatccg 63  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  36204391 acaaattcaatcaatgatttggacgtcaacgttgcagatccg 36204350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 45418609 - 45418656
Alignment:
Q  22 acaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagca 69  Q
    |||||||||| |||||||||||   |||||||||||||||||||||||    
T  45418609 acaaattcaatcaatgatttgggcatcaacgttgcagatccgaaagca 45418656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 47320435 - 47320384
Alignment:
Q  11 atcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    |||| ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  47320435 atcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 47320384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10258929 - 10258859
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| |||| | |||||||||||||||| |||||||||||  | |||||||||| | ||| |||||||    
T  10258929 aaagatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttgcatacccggaagcatg 10258859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 35964965 - 35964911
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||| ||| |||||||| |||||||||||||||||| | ||||| ||||||||    
T  35964965 attcaatcaaagatttggacgtcaacgttgcagatccggaggcatgagtatttca 35964911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 36161802 - 36161864
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||| ||| |||||| |||||||||||| | ||||||| ||||||||||| |||| ||||||    
T  36161802 tcaatcacatattcaatcaatgatttggacgccaacgttacagatccgaaaacatgagtattt 36161864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 43095705 - 43095783
Alignment:
Q  2 aagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||| |||||| |||||||||| || || |||||||||||  ||||||  |||||||||| ||||||| | ||||||    
T  43095705 aagatcgacatcagtcaattacaagttaaatcaatgatttggccgtcaacagtgcagatccggaagcatgagaatttca 43095783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 56156667 - 56156605
Alignment:
Q  9 acatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||| |||||||||||||||| |||||||| ||  |||||| ||||||||| | |||||||    
T  56156667 acatcagtcaattacaaattcaaccaatgattggggcgtcaacattgcagatctggaagcatg 56156605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 38166238 - 38166201
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatccg 63  Q
    |||||||||||||||||||  |||||||||||||||||    
T  38166238 attcaagcaatgatttggacatcaacgttgcagatccg 38166201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 48257628 - 48257587
Alignment:
Q  38 atttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||    
T  48257628 atttggacgtcaacgttacagatccgaaaacatgggtatttc 48257587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9178429 - 9178489
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatc 61  Q
    ||||||| ||||||||||||||||||| ||| |||| |||||    |||||||||||||||    
T  9178429 aaagatcgacatcaatcaattacaaatccaatcaataatttgagcatcaacgttgcagatc 9178489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 9048761 - 9048816
Alignment:
Q  22 acaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||||||| ||||||||||   |||||||||||| ||| |||| ||||||||||    
T  9048761 acaaattcaatcaatgatttgagcgtcaacgttgcaaatctgaaaacatgggtatt 9048816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 44596743 - 44596814
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||| ||| |||||||||||| ||||||||  || ||||||||||| ||| ||||| ||| ||||||||    
T  44596743 atctacatcagtca-ttacaaattcaatcaatgatt--gacgtcaacgttgctgattcgaaaacataggtatttc 44596814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 63; Significance: 5e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 32780 - 32702
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  32780 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttc 32702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 5e-28; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20553272 - 20553194
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  20553272 aaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttc 20553194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20559775 - 20559697
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  20559775 aaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttc 20559697  T

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Target: chr8; HSP #3
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20571337 - 20571259
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  20571337 aaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttc 20571259  T

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Target: chr8; HSP #4
Raw Score: 63; E-Value: 5e-28
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37971341 - 37971419
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||| |||||||    
T  37971341 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttc 37971419  T

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Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7883272 - 7883194
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||||||||| |||||||||||||||    
T  7883272 aaagatctacattaatcaattacaaattcaagcaataatttggacgtcagcgttgcagatccggaagcatgggtatttc 7883194  T

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Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10377747 - 10377825
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||    
T  10377747 aaagatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaagcatgggtatttc 10377825  T

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Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16928788 - 16928710
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||| ||||||||||    
T  16928788 aaagatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttc 16928710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 23230702 - 23230779
Alignment:
Q  2 aagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||| |||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||||||||||    
T  23230702 aagatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaacgttgcagatccggaagcatgggtatttc 23230779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-19
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 31013635 - 31013560
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||| ||||||| |||||||| |||||||||||| ||||||||||||||| || ||||||| ||||||||    
T  31013635 atctacatcagtcaattaaaaattcaatcaatgatttggacgtcaacgttgcagattcggaagcatgtgtatttca 31013560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16247254 - 16247176
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||||| |||||||||||||| |||||||||||   |||| |||||||||||| |||||||||||||||    
T  16247254 aaagatcgacatcaattaattacaaattcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatttc 16247176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17693645 - 17693567
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  |||||| ||||||||||| ||||||| |||||||    
T  17693645 aaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaagcatgagtatttc 17693567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 24186684 - 24186613
Alignment:
Q  9 acatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||| ||||||| || ||||| |||| ||||||  |||||||||||||||||||||||||||||||||||    
T  24186684 acatcagtcaattataagttcaatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttca 24186613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28086844 - 28086765
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||| || ||| | |||||||||||||| |||||||||||| |||||||||||||||||| || ||| |||||||||    
T  28086844 aaagatcgacttcagttaattacaaattcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttca 28086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 14544934 - 14544856
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| ||||||||||||||||| || || |||| ||||||  |||||||||||||||||| ||||||||| |||||    
T  14544934 aaagatcgacatcaatcaattacaagttaaatcaattatttgggcgtcaacgttgcagatccggaagcatgggaatttc 14544856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40211333 - 40211255
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| || ||||||||||| | |||||||||||  |||||||||| ||||||| ||||||| |||||||    
T  40211333 aaagatctacatcagtcgattacaaattccaccaatgatttgggcgtcaacgttgtagatccggaagcatgagtatttc 40211255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3673499 - 3673578
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||| |||||| ||||||||||||  || ||||| |||||  |||||||||||||||||| ||||||| ||||||||    
T  3673499 aaagatcgacatcagtcaattacaaatcaaatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttca 3673578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 7198203 - 7198156
Alignment:
Q  24 aaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||    
T  7198203 aaattcaatcaatgatttggatgtcaacgttgcagatccggaagcatg 7198156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 39657535 - 39657588
Alignment:
Q  24 aaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||||| |||||||||||| |||||||||||||||||  |||||||||||||    
T  39657535 aaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtatt 39657588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 14585751 - 14585810
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtat 76  Q
    |||| |||||||||| || ||||||||| |||||||||||||||||  ||||||||||||    
T  14585751 caatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtat 14585810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 33214687 - 33214632
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||||||||| |||||||||||   ||||||||||||||||| |||||||    
T  33214687 tcaattacaaattcaaccaatgatttgggcttcaacgttgcagatccggaagcatg 33214632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 40619089 - 40619026
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||| |||| ||||||  |||||||||||||||||  ||||||| |||||||    
T  40619089 tcaattacaaattcaatcaataatttgggcgtcaacgttgcagatccagaagcatgagtatttc 40619026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44091784 - 44091722
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaa 66  Q
    ||||||| ||||||||||| ||||||||||| ||||   ||| |||||||||||||||||||||||    
T  44091784 aaagatcgacatcaatcaaatacaaattcaatcaat---ttgaatgtcaacgttgcagatccgaaa 44091722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33347552 - 33347474
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| || ||| ||||| ||| |||||| ||||||||| |  ||| ||||||| ||||||||||||||||||||||    
T  33347552 aaagatcaacttcagtcaatcacagattcaatcaatgatttaggcgtcgacgttgcggatccgaaagcatgggtatttc 33347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45445842 - 45445772
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| |||||||||||||||| |||||||||||  |||||||||| | ||||| |||||||    
T  45445842 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatg 45445772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8443542 - 8443474
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagca 69  Q
    ||||||| || ||| ||||| ||| |||||| ||||||||||||  ||||||||||||||||| |||||    
T  8443542 aaagatcaacttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagca 8443474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 42046295 - 42046355
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||  ||||| |||||||||||  |||||||||||||    
T  42046295 caatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtatt 42046355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 471172 - 471121
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||| ||||||||||   |||||||||||||||||| |||||||||||||    
T  471172 attcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggtatt 471121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 36948460 - 36948390
Alignment:
Q  9 acatcaatcaattacaaattcaagcaatgattt-ggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||| |||||||||||||||| ||||||||| ||||| ||| |||||| ||||| ||||||| |||||||    
T  36948460 acatcagtcaattacaaattcaatcaatgatttaggatg-caatgttgcaaatccggaagcatgagtatttc 36948390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 7677306 - 7677244
Alignment:
Q  9 acatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||| ||||||||| |||| | ||||||||||   |||||||||||||||||| |||||||    
T  7677306 acatcagtcaattacagattcgaccaatgatttgagcgtcaacgttgcagatccggaagcatg 7677244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 15344381 - 15344427
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  15344381 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 15344427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 15433446 - 15433492
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  15433446 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 15433492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 15524750 - 15524796
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  15524750 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 15524796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 29617290 - 29617244
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||| ||| |||||| |||||||||||| |||||||||||||||||    
T  29617290 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 29617244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1236728 - 1236667
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||||| || ||| ||||| ||| |||||| ||||||| |||| |||||||||||||||||    
T  1236728 aaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatcc 1236667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1239428 - 1239367
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||||| || ||| ||||| ||| |||||| ||||||| |||| |||||||||||||||||    
T  1239428 aaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatcc 1239367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 18890714 - 18890669
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||    
T  18890714 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcc 18890669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 27110476 - 27110419
Alignment:
Q  21 tacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||||||| ||||||||||   |||||||||||||||| | ||||||| ||||||    
T  27110476 tacaaattcaatcaatgatttgagcgtcaacgttgcagatctggaagcatgtgtattt 27110419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 29939373 - 29939437
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||| ||||||| |||||||||||  || ||||||||| ||||  ||||||| ||||||||    
T  29939373 tcaattactaattcaaccaatgatttgggcgttaacgttgcatatccataagcatgagtatttca 29939437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 43834011 - 43833967
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatc 61  Q
    |||| |||||||||| ||||||||| || ||||||||||||||||    
T  43834011 caatcacaaattcaatcaatgatttagacgtcaacgttgcagatc 43833967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 14916207 - 14916148
Alignment:
Q  12 tcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||||| | | |||||| |||||||||||| ||| | |||||||||||| |||||||    
T  14916207 tcaatcaatcagagattcaatcaatgatttggacgtccatgttgcagatccggaagcatg 14916148  T

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Target: chr8; HSP #41
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 21237859 - 21237918
Alignment:
Q  12 tcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||  || |||||| |||||||||||| ||||| |||||||||||  |||||||    
T  21237859 tcaatcaatcccatattcaatcaatgatttggacgtcaatgttgcagatccagaagcatg 21237918  T

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Target: chr3 (Bit Score: 62; Significance: 2e-27; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9797567 - 9797490
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||    
T  9797567 aaagatctacatcaatcaattacaaattcaagcaatgatttgaacgttaacgttgcagatccggaagcatgggtattt 9797490  T

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Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21431668 - 21431746
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||    
T  21431668 aaagatctacatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaagcatgggtatttc 21431746  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36461464 - 36461386
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||| |||||||    
T  36461464 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttc 36461386  T

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Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6954729 - 6954651
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| ||||| | |||||||||| |||||||||||||||    
T  6954729 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaatgctgcagatccggaagcatgggtatttc 6954651  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7448947 - 7448869
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||| |||||||    
T  7448947 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttc 7448869  T

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Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7457089 - 7457011
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||| |||||||    
T  7457089 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttc 7457011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32701546 - 32701624
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||| ||||||||||||||| |||||||||||  |||||||||| ||||||| |||||||||||||||    
T  32701546 aaagatctacatcaaccaattacaaattcaatcaatgatttgggcgtcaacgttgtagatccggaagcatgggtatttc 32701624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 52923150 - 52923072
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||| || | |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  52923150 aaagatctatattagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttc 52923072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 45568472 - 45568401
Alignment:
Q  7 ctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||||||| |||||    
T  45568472 ctacatcaatcaattacaaattcaaacaatgatttggacgtcaactttgcagatccggaagcatggatattt 45568401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 7e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48650767 - 48650689
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||||| ||| |||||||    
T  48650767 aaagatctgcatcaatcaattacaaattcaaccaataatttggacgtcaacgttgcagatctgaaagaatgagtatttc 48650689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40556757 - 40556834
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||||||| | ||||| ||||||| ||||||    
T  40556757 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtattt 40556834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10229531 - 10229601
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |  |||||||||||||| ||||||||    
T  10229531 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgataacgttgcagatccaaaagcatg 10229601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 12050677 - 12050603
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||| || |||| |||||||    
T  12050677 atctacatcggtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttc 12050603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21533842 - 21533764
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| || | ||||||||||| |||| ||||||  |||||||||||||||||| |||||||||||||||    
T  21533842 aaagatctacatcagtcgactacaaattcaaccaataatttgggcgtcaacgttgcagatccggaagcatgggtatttc 21533764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 43488619 - 43488545
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||| ||| ||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||| |||||||    
T  43488619 atctgcattaatcaattataaattcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttc 43488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 46304549 - 46304475
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||| |||||||||||||||| ||||||||| |  |||||| ||||||||||| |||||||||||||||    
T  46304549 atctacatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagcatgggtatttc 46304475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 38860143 - 38860072
Alignment:
Q  5 atctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtat 76  Q
    |||||||||| || ||||||||||||| |||||| ||||  ||||||||||||||||||||| |||||||||    
T  38860143 atctacatcagtcgattacaaattcaaccaatgacttggtcgtcaacgttgcagatccgaaaacatgggtat 38860072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9998522 - 9998600
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||| | |   |||||||||||||  |||||||||||||||    
T  9998522 aaagatctacatcagtcaattacaaattcaaccaatgatttgcacgatgacgttgcagatccagaagcatgggtatttc 9998600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 14859556 - 14859622
Alignment:
Q  12 tcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    ||||||||| ||| |||||| |||||||||||| |||||||||||||||||  ||||||||||||||    
T  14859556 tcaatcaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattt 14859622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35864965 - 35864895
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| || ||| ||||||||| | |||||||    
T  35864965 aaagatcgacatcaatcaattacaaattcaatcaatgatttggacgttaacattgcagatctggaagcatg 35864895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 38545854 - 38545924
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  |||||||||| |||||||||| ||||    
T  38545854 aaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaaacatg 38545924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 40487381 - 40487458
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| ||||| |||||||||  |||||||||||| |||||| ||||||||||| |||||| ||||||||    
T  40487381 aaagatctacatcagtcaat-acaaattcagccaatgatttggacgtcaacattgcagatccggaagcataggtatttc 40487458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 54149047 - 54149124
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||||| |||||||||  | |||||||||||  |||||||||||||||||| |||||||| ||||||    
T  54149047 aaagatctacatcaatca-ttacaaatttcaccaatgatttgggcgtcaacgttgcagatccggaagcatggctatttc 54149124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 23799928 - 23799864
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||||| ||||||||| |  ||||||||||||||||||||| |||| ||||||||    
T  23799928 tcaattacaaattcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttca 23799864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33579935 - 33580003
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagca 69  Q
    ||||||| |||||| |||||||||||||||| |||||||||||  |||||||||| ||||||| |||||    
T  33579935 aaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagca 33580003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 19339246 - 19339309
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||||| ||||||||| | |||||| |||||||||||  |||||||||||||||    
T  19339246 tcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatttc 19339309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10108291 - 10108369
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||| | |  ||||||||||||||  | ||||| |||||||    
T  10108291 aaagatctacatcagtcaattacaaattcaaccaatgatttgaacgataacgttgcagatccagatgcatgagtatttc 10108369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10233125 - 10233203
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| ||||||||| || |  ||||||||||||||  || |||| |||||||    
T  10233125 aaagatctacatcagtcaattacaaattcaaccaatgatttagacgataacgttgcagatccagaaacatgagtatttc 10233203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 12149817 - 12149739
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| ||  |||||||||||| |||||||||||  |||||||||||||||| | ||| |||||||||||    
T  12149817 aaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttc 12149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 41818280 - 41818346
Alignment:
Q  11 atcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||||| |||||||||||| |||||||||| ||||||| ||||||||||| ||| ||| ||||||    
T  41818280 atcaatcatttacaaattcaatcaatgatttgaatgtcaatgttgcagatccaaaaacattggtatt 41818346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 51923804 - 51923858
Alignment:
Q  23 caaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||||||| |||||||||||| |||||||||||||||||  |||||||||||||    
T  51923804 caaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtatt 51923858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 21313101 - 21313169
Alignment:
Q  11 atcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||| |||||||||||||||| |||||||||||| |||||||| ||| ||| |||| |||| |||||||    
T  21313101 atcagtcaattacaaattcaatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtatttc 21313169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 51303660 - 51303600
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||  |||||||||||||    
T  51303660 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtatt 51303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26275852 - 26275773
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||| |||||| |||  ||||||||||| ||||||||| | ||| |||||||||||| ||||| |||| ||||||||    
T  26275852 aaagatcgacatcagtcatatacaaattcaatcaatgattttgttgttaacgttgcagattcgaaaacatgagtatttca 26275773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 43016925 - 43016972
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccg 63  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||    
T  43016925 tcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccg 43016972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 45424868 - 45424927
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggta 75  Q
    |||||||||||||||| |||||||||||  |||||| ||||||||||| || ||||||||    
T  45424868 tcaattacaaattcaatcaatgatttgggcgtcaacattgcagatccggaatcatgggta 45424927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45425647 - 45425709
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccg 63  Q
    ||||||| | ||||||||||||||||||||| |||||||||||   ||||| |||||||||||    
T  45425647 aaagatcgaaatcaatcaattacaaattcaatcaatgatttgggcttcaacattgcagatccg 45425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47896207 - 47896277
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||| ||||||| |||||||||||||||| |||||||||||  || || |||||| ||||| |||||||    
T  47896207 aaagatttacatcagtcaattacaaattcaaccaatgatttgggcgtaaatgttgcatatccggaagcatg 47896277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29922112 - 29922173
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||||| || |||| |||| ||| |||||| |||||||||||| |||||||||||||||||    
T  29922112 aaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatcc 29922173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29971265 - 29971326
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||||| || |||| |||| ||| |||||| |||||||||||| |||||||||||||||||    
T  29971265 aaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatcc 29971326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 35175474 - 35175535
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| ||| |||||| ||||||||||||  |||||||||||||||||||| |||| |||||    
T  35175474 tcaatcacatattcaatcaatgatttggacatcaacgttgcagatccgaaaacatgagtatt 35175535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 16235497 - 16235557
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||| |||||||||||  ||||||||||||||||   |||||||||||||    
T  16235497 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtatt 16235557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 20464988 - 20464925
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||||  ||||||||||  ||||| |||||||||  ||||||||| |||||||    
T  20464988 tcaattacaaattcaataaatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttc 20464925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 19619783 - 19619833
Alignment:
Q  15 atcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaa 65  Q
    ||||||||||| ||||| ||||||||| | ||||||||||| |||||||||    
T  19619783 atcaattacaagttcaatcaatgatttaggtgtcaacgttgtagatccgaa 19619833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 47042081 - 47042011
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||  ||||| ||| |||||||||||| ||||| |||||  |||||||||| ||||||| |||||||    
T  47042081 aaagatcagcatcagtcagttacaaattcaaccaatggtttgggcgtcaacgttgaagatccggaagcatg 47042011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48199832 - 48199902
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    ||||||| || ||||||||||| ||||| || |||||||||||| ||| |||||||| ||||  |||||||    
T  48199832 aaagatcaacttcaatcaattataaatttaatcaatgatttggacgtcgacgttgcaaatccagaagcatg 48199902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 8914783 - 8914828
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||    
T  8914783 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcc 8914828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 36910673 - 36910640
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagca 34  Q
    |||||| |||||||||||||||||||||||||||    
T  36910673 aaagatgtacatcaatcaattacaaattcaagca 36910640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 50194353 - 50194292
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| ||| |||||| | |||||||||| || ||||||||||||||| ||||||| |||||    
T  50194353 tcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagtatt 50194292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53807891 - 53807830
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatcc 62  Q
    ||||||| || ||| ||||| ||| |||||| |||||||||||| |||||||||||| ||||    
T  53807891 aaagatcaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatcc 53807830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 4711583 - 4711615
Alignment:
Q  47 tcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||||||||||||| |||||||||||||||    
T  4711583 tcaacgttgcagatccggaagcatgggtatttc 4711615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 7546686 - 7546746
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||| |||||||||  ||||||||||   ||||||||||| ||||| ||||||||||||||    
T  7546686 caatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggtatt 7546746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 21289831 - 21289787
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatc 61  Q
    |||| |||||||||| ||||||||| | |||||||||||||||||    
T  21289831 caatcacaaattcaatcaatgattttggtgtcaacgttgcagatc 21289787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 27706243 - 27706184
Alignment:
Q  17 caattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtat 76  Q
    |||| |||||||||| ||||||||| |  |||||||||||| ||||  ||||||||||||    
T  27706243 caatcacaaattcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggtat 27706184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 53099860 - 53099915
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatg 71  Q
    |||||||||| ||||| |||||||||||  ||||||||| || ||||| |||||||    
T  53099860 tcaattacaagttcaatcaatgatttgggcgtcaacgttacatatccggaagcatg 53099915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 28; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 53508306 - 53508357
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||| |||||||||||| |||||| ||||| |||| |||||||| |||||    
T  53508306 attcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtatt 53508357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 55; Significance: 3e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 55; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15548 - 15626
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||| ||||||||||| |||||||| ||||||    
T  15548 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacattgcagatccggaagcatggatatttc 15626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 54; Significance: 1e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 66074 - 65997
Alignment:
Q  2 aagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||| |||||| |||||||||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||    
T  66074 aagatcgacatcagtcaattacaaattcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttc 65997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 1e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 71897 - 71824
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggt 74  Q
    |||||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  71897 aaagatctacattagtcaattacaaattcaaccaatgatttggatgtcaacgttgtagatccggaagcatgggt 71824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 51; Significance: 7e-21; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 7e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 50832 - 50910
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||| | | |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||||    
T  50832 aaagatctacgttagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttc 50910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 6e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 71333 - 71256
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtattt 78  Q
    |||||||  ||||| ||||||| |||||||| |||||||| || ||||||||||||||||||| ||||||||||||||    
T  71333 aaagatcggcatcagtcaattataaattcaatcaatgattggggtgtcaacgttgcagatccggaagcatgggtattt 71256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 43; Significance: 4e-16; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 43; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2006 - 1928
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||| | |||||||||||||||| ||||| |||||  ||||||||||||||||||||| |||  |||||||    
T  2006 aaagatctacattagtcaattacaaattcaaccaatggtttgggcgtcaacgttgcagatccgaaaacataagtatttc 1928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10075 - 9996
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||   |||||||||||||||||  || |||| ||||||||    
T  10075 aaagatcgacatcgatcaattacaaattcaaccaatgatttgagagtcaacgttgcagatccagaaacatgtgtatttca 9996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 39; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8568 - 8646
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| ||  |||||||||||| |||||||||||  |||||||||||||||| | ||| |||||||||||    
T  8568 aaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttc 8646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 39; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31307 - 31229
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||    |||| |||||||||||| |||||||||||||||    
T  31307 aaagatcgacatcactcaattacaaattcaatcaacgatttgagcatcaatgttgcagatccggaagcatgggtatttc 31229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 6101 - 6162
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| ||| |||||| |||||||||||||||||| |||||||||||| ||||||| |||||    
T  6101 tcaatcacatattcaatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtatt 6162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 38; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 38; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 1835 - 1774
Alignment:
Q  18 aattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttc 79  Q
    |||||||||||||| |||||||||||    |||||||||||||||| |||||||||||||||    
T  1835 aattacaaattcaatcaatgatttgggcaccaacgttgcagatccggaagcatgggtatttc 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 36; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 36; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8126 - 8188
Alignment:
Q  1 aaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaa 66  Q
    ||||||| ||||||||||| ||||||||||| ||||   ||| |||||||||||||||||||||||    
T  8126 aaagatcgacatcaatcaaatacaaattcaatcaat---ttgaatgtcaacgttgcagatccgaaa 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 92504 - 92453
Alignment:
Q  26 attcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    |||||| |||||||||||| |||||||||| ||||||  |||||||||||||    
T  92504 attcaatcaatgatttggacgtcaacgttgtagatccagaagcatgggtatt 92453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 36898 - 36960
Alignment:
Q  18 aattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatttca 80  Q
    |||||||||||||| |||||||||||  ||||| |||||  ||| | ||||||||||||||||    
T  36898 aattacaaattcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttca 36960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 58106 - 58045
Alignment:
Q  16 tcaattacaaattcaagcaatgatttggatgtcaacgttgcagatccgaaagcatgggtatt 77  Q
    ||||| ||| |||||| | |||||||||| |||||| ||||||||||| ||||||| |||||    
T  58106 tcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtatt 58045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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