View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5804-19 (Length: 100)

Name: Solexa-NF5804-19
Description: NF5804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5804-19
Solexa-NF5804-19
[»] chr2 (11 HSPs)
chr2 (4-100)||(23019673-23019769)
chr2 (4-100)||(22799093-22799189)
chr2 (4-95)||(25963688-25963778)
chr2 (4-100)||(25616243-25616339)
chr2 (12-95)||(21916071-21916153)
chr2 (12-95)||(21318608-21318691)
chr2 (15-78)||(22811901-22811963)
chr2 (12-95)||(24716502-24716583)
chr2 (7-68)||(22738179-22738240)
chr2 (48-95)||(31344962-31345009)
chr2 (48-95)||(37524772-37524819)
[»] chr1 (9 HSPs)
chr1 (4-100)||(21788009-21788105)
chr1 (6-100)||(22468663-22468757)
chr1 (12-95)||(18182093-18182175)
chr1 (11-95)||(8761605-8761689)
chr1 (12-95)||(17678559-17678640)
chr1 (12-93)||(22449240-22449320)
chr1 (4-78)||(20135245-20135319)
chr1 (48-95)||(20229118-20229165)
chr1 (23-66)||(33797596-33797639)
[»] chr8 (14 HSPs)
chr8 (4-100)||(23776802-23776898)
chr8 (7-95)||(20466011-20466098)
chr8 (4-95)||(16410226-16410316)
chr8 (4-95)||(17926678-17926768)
chr8 (12-95)||(30643264-30643346)
chr8 (4-100)||(18678069-18678165)
chr8 (4-100)||(32121790-32121886)
chr8 (12-95)||(15611441-15611523)
chr8 (12-95)||(15602989-15603071)
chr8 (48-82)||(21383738-21383772)
chr8 (12-93)||(16861300-16861379)
chr8 (6-78)||(23648613-23648685)
chr8 (18-68)||(21918999-21919049)
chr8 (1-68)||(20536263-20536330)
[»] scaffold0093 (1 HSPs)
scaffold0093 (4-92)||(4779-4867)
[»] scaffold0023 (2 HSPs)
scaffold0023 (4-100)||(38446-38542)
scaffold0023 (22-100)||(23633-23711)
[»] scaffold0096 (1 HSPs)
scaffold0096 (4-100)||(16316-16411)
[»] chr4 (9 HSPs)
chr4 (4-100)||(15093829-15093925)
chr4 (4-95)||(16348636-16348726)
chr4 (4-95)||(16356924-16357014)
chr4 (11-95)||(5338953-5339037)
chr4 (12-95)||(16488050-16488132)
chr4 (32-95)||(13812991-13813053)
chr4 (12-95)||(20157432-20157514)
chr4 (22-66)||(43256161-43256205)
chr4 (48-95)||(43256386-43256433)
[»] scaffold0367 (1 HSPs)
scaffold0367 (4-95)||(951-1041)
[»] scaffold0104 (2 HSPs)
scaffold0104 (4-95)||(1884-1974)
scaffold0104 (12-95)||(9575-9656)
[»] scaffold1895 (1 HSPs)
scaffold1895 (36-100)||(1194-1258)
[»] scaffold0079 (1 HSPs)
scaffold0079 (4-95)||(44135-44225)
[»] scaffold0035 (1 HSPs)
scaffold0035 (4-95)||(46699-46789)
[»] chr6 (15 HSPs)
chr6 (12-95)||(18907173-18907255)
chr6 (6-95)||(21766751-21766839)
chr6 (4-99)||(15041518-15041613)
chr6 (6-92)||(21834863-21834948)
chr6 (12-95)||(18180556-18180637)
chr6 (11-95)||(22074184-22074268)
chr6 (4-100)||(23992485-23992578)
chr6 (12-76)||(20907973-20908036)
chr6 (25-68)||(16496323-16496366)
chr6 (32-95)||(16523357-16523419)
chr6 (12-95)||(22408276-22408358)
chr6 (48-95)||(23414730-23414777)
chr6 (23-66)||(27415942-27415985)
chr6 (48-95)||(27556488-27556535)
chr6 (48-95)||(31478119-31478166)
[»] chr3 (18 HSPs)
chr3 (4-95)||(11298500-11298590)
chr3 (12-93)||(19725886-19725965)
chr3 (12-95)||(12496319-12496402)
chr3 (4-100)||(46822323-46822419)
chr3 (12-95)||(14668619-14668701)
chr3 (13-95)||(11851644-11851725)
chr3 (4-100)||(12511115-12511211)
chr3 (12-95)||(12037925-12038007)
chr3 (12-95)||(14665463-14665545)
chr3 (32-95)||(11862875-11862937)
chr3 (12-95)||(18383889-18383970)
chr3 (32-95)||(322673-322735)
chr3 (20-77)||(14576823-14576880)
chr3 (48-95)||(4589082-4589129)
chr3 (48-95)||(5223149-5223196)
chr3 (48-95)||(11300739-11300786)
chr3 (48-95)||(12339551-12339598)
chr3 (48-95)||(15464950-15464997)
[»] chr5 (16 HSPs)
chr5 (4-100)||(21873308-21873401)
chr5 (4-100)||(17517168-17517264)
chr5 (12-95)||(24767518-24767600)
chr5 (12-95)||(1858950-1859031)
chr5 (4-95)||(20767028-20767117)
chr5 (12-95)||(21366638-21366719)
chr5 (12-95)||(23451410-23451491)
chr5 (23-76)||(20910790-20910843)
chr5 (4-95)||(20805606-20805695)
chr5 (1-95)||(23458643-23458735)
chr5 (1-95)||(23462904-23462996)
chr5 (23-95)||(18356390-18356462)
chr5 (48-95)||(18356042-18356089)
chr5 (48-95)||(20911144-20911191)
chr5 (25-68)||(21729063-21729106)
chr5 (25-68)||(21808388-21808431)
[»] scaffold0080 (1 HSPs)
scaffold0080 (4-93)||(18630-18718)
[»] chr7 (16 HSPs)
chr7 (12-95)||(12321714-12321796)
chr7 (12-95)||(2760193-2760276)
chr7 (32-95)||(39267872-39267934)
chr7 (12-95)||(14429945-14430026)
chr7 (12-95)||(3271885-3271967)
chr7 (32-95)||(2832414-2832476)
chr7 (34-95)||(9751728-9751788)
chr7 (48-95)||(7519331-7519378)
chr7 (23-67)||(40443467-40443511)
chr7 (23-66)||(2530139-2530182)
chr7 (48-95)||(13918753-13918800)
chr7 (4-62)||(14932738-14932797)
chr7 (4-62)||(15356173-15356232)
chr7 (4-62)||(15360287-15360346)
chr7 (48-95)||(25927476-25927523)
chr7 (25-68)||(26212075-26212118)
[»] scaffold0185 (1 HSPs)
scaffold0185 (11-95)||(33608-33692)
[»] scaffold0761 (1 HSPs)
scaffold0761 (12-95)||(6281-6363)
[»] scaffold0676 (1 HSPs)
scaffold0676 (12-95)||(4492-4574)
[»] scaffold0476 (2 HSPs)
scaffold0476 (12-95)||(5648-5730)
scaffold0476 (12-95)||(6843-6925)
[»] scaffold0412 (1 HSPs)
scaffold0412 (4-95)||(6387-6477)
[»] scaffold0346 (1 HSPs)
scaffold0346 (12-95)||(15149-15230)
[»] scaffold0327 (1 HSPs)
scaffold0327 (12-95)||(351-434)
[»] scaffold0280 (1 HSPs)
scaffold0280 (15-95)||(19264-19344)
[»] scaffold0037 (1 HSPs)
scaffold0037 (12-92)||(21544-21623)
[»] scaffold1296 (1 HSPs)
scaffold1296 (12-95)||(455-537)
[»] scaffold0425 (1 HSPs)
scaffold0425 (12-95)||(221-304)
[»] scaffold0615 (1 HSPs)
scaffold0615 (12-77)||(2075-2139)
[»] scaffold0216 (1 HSPs)
scaffold0216 (12-95)||(17083-17166)
[»] scaffold1326 (1 HSPs)
scaffold1326 (12-95)||(1462-1544)
[»] scaffold0166 (1 HSPs)
scaffold0166 (12-95)||(10015-10097)
[»] scaffold1052 (1 HSPs)
scaffold1052 (12-95)||(2967-3049)
[»] scaffold0456 (1 HSPs)
scaffold0456 (21-68)||(10424-10471)
[»] scaffold0022 (1 HSPs)
scaffold0022 (12-95)||(73740-73821)
[»] scaffold0393 (1 HSPs)
scaffold0393 (32-95)||(1575-1637)
[»] scaffold0107 (1 HSPs)
scaffold0107 (23-66)||(15417-15460)
[»] scaffold0021 (1 HSPs)
scaffold0021 (21-75)||(174839-174893)
[»] scaffold0120 (2 HSPs)
scaffold0120 (23-68)||(32956-33001)
scaffold0120 (23-68)||(46004-46049)
[»] scaffold0008 (1 HSPs)
scaffold0008 (14-95)||(30716-30795)
[»] scaffold0051 (1 HSPs)
scaffold0051 (48-95)||(30969-31016)
[»] scaffold0003 (2 HSPs)
scaffold0003 (48-95)||(71147-71194)
scaffold0003 (23-66)||(71376-71419)
[»] scaffold0001 (1 HSPs)
scaffold0001 (13-76)||(422523-422585)


Alignment Details
Target: chr2 (Bit Score: 89; Significance: 2e-43; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 23019769 - 23019673
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23019769 agcataggcagatcacaacaacaacatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 23019673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 5e-41
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22799189 - 22799093
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  22799189 agcataggcagatcacaacaacatcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaaggcacataa 22799093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 4e-26
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 25963778 - 25963688
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  25963778 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 25963688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 25616243 - 25616339
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| || ||||||||||||||||  |||||||| ||||| |||||||||||||||    
T  25616243 agcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 25616339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 21916153 - 21916071
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  21916153 cagatcacaacaaaagcataaattcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 21916071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 21318691 - 21318608
Alignment:
Q  12 cagatcacaacaacagcatgacttcataa-tatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||| |||||| ||||||||| |||||| |||||||| |||||||||| || |||||| | ||||| ||||||||||    
T  21318691 cagatcacaacagcagcataacttcataattatcaa-ttcatttctacaacatcttgattattcaacaatatctcaagtaatgca 21318608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 22811963 - 22811901
Alignment:
Q  15 atcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaata 78  Q
    ||||||||||||  || ||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  22811963 atcacaacaacattataacttcatcatatcaatt-catttcaacaacatcttgatcattcaata 22811901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 24716583 - 24716502
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||| ||||||||||||| ||| |  |||||||||    
T  24716583 cagatcacaacaacattat-acttcataacaacaatt-catttcaacaacatcataatcattcaataatatgtctagtaatgca 24716502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 22738240 - 22738179
Alignment:
Q  7 ataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    |||||||| | |||| ||||||||||| | |||||||||||| || |||| |||||||||||    
T  22738240 ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaa 22738179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 31344962 - 31345009
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  31344962 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 31345009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 37524772 - 37524819
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||| |||||||| ||||||||||| ||| | ||||||||||    
T  37524772 ttcatttcaataacatcttgatcattcaataatatttcaagtaatgca 37524819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-43; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 21788105 - 21788009
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21788105 agcataggcagatcacaacaacagcatgacttcgtaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 21788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 22468757 - 22468663
Alignment:
Q  6 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  22468757 cataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattcaataatatctcaagtaatgcacataa 22468663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 18182175 - 18182093
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||| | ||||||||||    
T  18182175 cagatcacaacaacagcataacttcataatatcaattt-atttcaacaacatcttgatcattcaataatatttcaagtaatgca 18182093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 9e-18
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 8761689 - 8761605
Alignment:
Q  11 gcagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||| || |||||||| ||||| ||||||||||    
T  8761689 gcagatcacaacaacaacataacttcataattatcaatt-catttcaacaacatcttgattattcaataatatctcaagtaatgca 8761605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 17678640 - 17678559
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||||||||||||||||| ||| | ||||||||||    
T  17678640 cagatcacaacaacattat-acttcataacaacaatt-catttcaacaacatcttaatcattcaataatatttcaagtaatgca 17678559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 22449320 - 22449240
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatg 93  Q
    ||||||||||||| ||||| | ||||||||||||||  | ||||||||||||||| ||||||||||| ||| | ||||||||    
T  22449320 cagatcacaacaagagcataatttcataatatcaata-cttttcaacaacatcttgatcattcaataatatttcaagtaatg 22449240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 20135245 - 20135319
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaata 78  Q
    ||||||||||||| ||||||||| |||||| | |||||||||  | || ||||||||||||||||  ||||||||    
T  20135245 agcataggcagattacaacaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaata 20135319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 20229165 - 20229118
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  20229165 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 20229118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 33797596 - 33797639
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatctt 66  Q
    |||| |||||| | ||||||||||||||| ||||||||||||||    
T  33797596 aacaacatgacataataatatcaatttcaattcaacaacatctt 33797639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 5e-41; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 5e-41
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 23776898 - 23776802
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23776898 agcataggcagatcacaacatcagcatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 23776802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 20466098 - 20466011
Alignment:
Q  7 ataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  20466098 ataggcagatcacaacaacaacataacttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 20466011  T

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Target: chr8; HSP #3
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 16410316 - 16410226
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  16410316 agcataggcagatcacaacaacagcataatttcataataccaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 16410226  T

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Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 17926768 - 17926678
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||| ||||||||||| | |||| |||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  17926768 agcataggcagatcaaaacaacagcataatttcacaatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 17926678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 30643346 - 30643264
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  30643346 cagatcacaacaacaacataacttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 30643264  T

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Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 18678165 - 18678069
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| || ||||||||||||||||  |||||||| ||||| |||||||||||||||    
T  18678165 agcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 18678069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-19
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 32121790 - 32121886
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| || ||||||||||||||||  |||||||| ||||| |||||||||||||||    
T  32121790 agcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 32121886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 15611523 - 15611441
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| ||||||||  | ||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  15611523 cagatcacatcaacagcaaaatttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 15611441  T

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Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 15603071 - 15602989
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| ||||||||  | ||||||||||| ||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  15603071 cagatcacatcaacagcaaaatttcataatatcgatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 15602989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 21383738 - 21383772
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactat 82  Q
    |||||||||||||||||||||||||||||||||||    
T  21383738 ttcatttcaacaacatcttaatcattcaatactat 21383772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 16861379 - 16861300
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatg 93  Q
    |||||||||||||||  || | ||||||| | ||| ||||||||||||||||||||||||||||||| ||| | ||||||||    
T  16861379 cagatcacaacaacattat-atttcataacaacaa-ttcatttcaacaacatcttaatcattcaataatatttcaagtaatg 16861300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 23648613 - 23648685
Alignment:
Q  6 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaata 78  Q
    ||||||||||| ||||||||| |||||| | ||||||||| || || | ||||||||||||||  ||||||||    
T  23648613 cataggcagattacaacaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaata 23648685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21919049 - 21918999
Alignment:
Q  18 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    |||| ||||||||||| | |||||||||||| || ||||||||||||||||    
T  21919049 acaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaa 21918999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20536263 - 20536330
Alignment:
Q  1 agaagcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    |||| |||||||||   |||| ||||||||||| | |||||||||||| || |||| |||||||||||    
T  20536263 agaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaa 20536330  T

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Target: scaffold0093 (Bit Score: 81; Significance: 1e-38; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 4867 - 4779
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaat 92  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4867 agcataggcagatcacaacaacagcttgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaat 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 81; Significance: 1e-38; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 38542 - 38446
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38542 agcatagacagatcacaacaacaacatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 38446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 23711 - 23633
Alignment:
Q  22 caacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23711 caacaacatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 23633  T

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Target: scaffold0096 (Bit Score: 73; Significance: 7e-34; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 73; E-Value: 7e-34
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 16411 - 16316
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    |||||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16411 agcataggcatatcacaacaacatcatgacttcataatatcaatta-atttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 16316  T

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Target: chr4 (Bit Score: 73; Significance: 7e-34; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 7e-34
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 15093829 - 15093925
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||||||||    
T  15093829 agcatagaaagatcacaacaacagcatgacttcataatatcaatttcatttctacaacatattaatcattcaataatatattaagtaatgcacataa 15093925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 16348726 - 16348636
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||| || |||||||| ||| ||||||||||||    
T  16348726 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttccacaacatcttgataattcaataatattttaagtaatgca 16348636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 16357014 - 16356924
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||| ||||||||||| ||| | ||||||||||    
T  16357014 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttccacaacatcttgatcattcaataatatttcaagtaatgca 16356924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 9e-18
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 5339037 - 5338953
Alignment:
Q  11 gcagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||| || |||||||| ||||| ||||||||||    
T  5339037 gcagatcacaacaacagcataacttcataattatcaatt-catttcaacaaaatcttgattattcaataatatctcaagtaatgca 5338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 16488132 - 16488050
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||| | |||||| ||||||||||||||||| | ||||||||||||||| ||||||||||| ||| | ||||||||||    
T  16488132 cagatcacaaaagcagcataacttcataatatcaatt-cttttcaacaacatcttgatcattcaataatatttcaagtaatgca 16488050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 13813053 - 13812991
Alignment:
Q  32 acttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  13813053 acttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 13812991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 20157514 - 20157432
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| |||| | || |||| |||||||||||| ||||||||||||||||  ||||||||||| ||| | ||||||||||    
T  20157514 cagatcacatcaacggtataactttataatatcaatt-catttcaacaacatctagatcattcaataatatttcaagtaatgca 20157432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 43256205 - 43256161
Alignment:
Q  22 caacagcatgacttcataatatcaatttcatttcaacaacatctt 66  Q
    ||||| |||||| | ||||||||||||||| ||||||||||||||    
T  43256205 caacaacatgacataataatatcaatttcaattcaacaacatctt 43256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 43256433 - 43256386
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  43256433 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 43256386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 60; Significance: 4e-26; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 60; E-Value: 4e-26
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 951 - 1041
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  951 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 60; Significance: 4e-26; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 60; E-Value: 4e-26
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 1884 - 1974
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  1884 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 1974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 9575 - 9656
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  9575 cagatcacatcaacagcataact-cataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 9656  T

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Target: scaffold1895 (Bit Score: 57; Significance: 2e-24; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 57; E-Value: 2e-24
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 1258 - 1194
Alignment:
Q  36 cataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  1258 cataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaaataatgcacataa 1194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 56; Significance: 9e-24; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 44135 - 44225
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||| || |||||||| ||| ||||||||||||    
T  44135 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttccacaacatcttgataattcaataatattttaagtaatgca 44225  T

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Target: scaffold0035 (Bit Score: 56; Significance: 9e-24; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 46789 - 46699
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| ||| | ||||||||||    
T  46789 agcataggcagatcacaacaatagcataacttcataatatcaa-ttcatttccacaacatcttgatcattcaataatatttcaagtaatgca 46699  T

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Target: chr6 (Bit Score: 56; Significance: 9e-24; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 18907173 - 18907255
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  18907173 cagatcacaacaacagcataacttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 18907255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 21766751 - 21766839
Alignment:
Q  6 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  21766751 cataggcagatcacaacaacaacataatttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 21766839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 15041613 - 15041518
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacata 99  Q
    |||||||||||||||||||||||||||||| | |||||||||| | || ||||| ||||||||||  ||||||||  |||| ||||||||||||||    
T  15041613 agcataggcagatcacaacaacagcatgacattataatatcaaatgcaattcaataacatcttaagtattcaataaaatctcaagtaatgcacata 15041518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-18
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 21834948 - 21834863
Alignment:
Q  6 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaat 92  Q
    |||||| |||||||||||||| ||| | ||||||||||||||| ||||||||||||||||| ||||||||||| ||| | |||||||    
T  21834948 cataggtagatcacaacaacaacataatttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaat 21834863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 18180556 - 18180637
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||||||||||||||||| ||| | ||||||||||    
T  18180556 cagatcacaacaacattat-acttcataacaacaatt-catttcaacaacatcttaatcattcaataatatttcaagtaatgca 18180637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 22074268 - 22074184
Alignment:
Q  11 gcagatcacaacaacagcatgacttcat-aatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||||||| ||||||| | |||||| ||||||||| |||||| || || |||||||| ||||| ||||||||||    
T  22074268 gcagatcacaacaacagcataacttcatgattatcaa-ttcatttcagcaacattttgattattcaataatatctcaagtaatgca 22074184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 23992485 - 23992578
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| || ||||||   |||||||  |||||||| ||||| |||||||||||||||    
T  23992485 agcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaac---atcttaaatattcaataatatctcaagtaatgcacataa 23992578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 20908036 - 20907973
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaa 76  Q
    ||||||||||||||| ||| | ||||||| | ||||| ||||||||||||||||| |||||||||    
T  20908036 cagatcacaacaacatcataatttcataacaacaatt-catttcaacaacatcttgatcattcaa 20907973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 16496323 - 16496366
Alignment:
Q  25 cagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    ||||||||| | |||||||||||| || ||||||||||||||||    
T  16496323 cagcatgacataataatatcaattgcaattcaacaacatcttaa 16496366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 16523419 - 16523357
Alignment:
Q  32 acttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| | | ||||||||    
T  16523419 acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaggtaatgca 16523357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 22408358 - 22408276
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||   || ||||||||| | ||||| ||||||||||||||||  ||||||||| | ||| | ||||||||||    
T  22408358 cagatcacaacaactttataacttcataacaacaatt-catttcaacaacatctagatcattcaagaatatttcaagtaatgca 22408276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 23414730 - 23414777
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  23414730 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 23414777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 27415985 - 27415942
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatctt 66  Q
    ||||||||||| | ||| ||||||||||| ||||||||||||||    
T  27415985 aacagcatgacataatattatcaatttcaattcaacaacatctt 27415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 27556488 - 27556535
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  27556488 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 27556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 31478166 - 31478119
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||| ||||||||||| ||||||||||| ||| | ||||||||||    
T  31478166 ttcattttaacaacatcttgatcattcaataatatttcaagtaatgca 31478119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 9e-24; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 9e-24
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 11298590 - 11298500
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||||||| ||| | ||||||||||||| ||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  11298590 agcataggcagatcacaacaacaacataatttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 11298500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 9e-18
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 19725965 - 19725886
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatg 93  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||    
T  19725965 cagatcacatcaacagcatgact-cataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatg 19725886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 12496319 - 12496402
Alignment:
Q  12 cagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||| ||||||||||| ||| | ||||||||||    
T  12496319 cagatcacaacaacagcataacttcataattatcaatt-catttctacaacatcttgatcattcaataatatttcaagtaatgca 12496402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 46822323 - 46822419
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||| ||| ||||| || ||| | | |||||||||| || ||||||||||||||||  |||||||| ||||| |||||||||||||||    
T  46822323 agcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 46822419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 14668619 - 14668701
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| |||||| || |||| |||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  14668619 cagatcacatcaacagtataactttataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 14668701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 5e-16
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 11851644 - 11851725
Alignment:
Q  13 agatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||  || ||||||||||||||||| |||||||||||||||||  |||||||||| ||| | ||||||||||    
T  11851644 agatcacaacaacattataacttcataatatcaatt-catttcaacaacatcttgttcattcaataatatttcaagtaatgca 11851725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 12511115 - 12511211
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||| ||| ||||| || ||| | | |||||||||| || |||||||||||||| |  |||||||| ||||| |||||||||||||||    
T  12511115 agcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaacaacatcttcaatattcaataatatctcaagtaatgcacataa 12511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 12038007 - 12037925
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || | ||||||| | ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  12038007 cagatcacaacaacattataatttcataacaacaatt-catttcaacaacatcttgatcattcaataatatctcaagtaatgca 12037925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 14665463 - 14665545
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| |||||| || |||| | |||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  14665463 cagatcacatcaacagtataactttaaaatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 14665545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 11862875 - 11862937
Alignment:
Q  32 acttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||| ||| | ||||||||||    
T  11862875 acttcataatatcaatt-catttcaacaacatcttggtcattcaataatatttcaagtaatgca 11862937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 18383970 - 18383889
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| | ||||||||||    
T  18383970 cagatcacaacaacattat-acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgca 18383889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 322673 - 322735
Alignment:
Q  32 acttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| | ||||||||||    
T  322673 acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgca 322735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 14576880 - 14576823
Alignment:
Q  20 aacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaat 77  Q
    |||||||||||||| | |||||||||||| ||  |||||||||||||||  |||||||    
T  14576880 aacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaat 14576823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 4589129 - 4589082
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  4589129 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 4589082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 5223149 - 5223196
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  5223149 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 5223196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11300786 - 11300739
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  11300786 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 11300739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 12339551 - 12339598
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  12339551 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 12339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 15464950 - 15464997
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  15464950 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 15464997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 4e-23; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 4e-23
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 21873308 - 21873401
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    |||||||||||   |||||| ||||||||||||||||||||||| ||||||   ||||||||||| ||||||||| |||||||||||||||||||||    
T  21873308 agcataggcaggatacaacatcagcatgacttcataatatcaatctcattt---caacatcttaaccattcaataatatcttaagtaatgcacataa 21873401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 17517264 - 17517168
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgcacataa 100  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||  || ||||||||||||||||  |||||||| ||||| |||||||||||||||    
T  17517264 agcataggcagattacatcaacagcaagacataaaaatatcaatcgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 17517168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 24767600 - 24767518
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| ||| || || |||| |||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  24767600 cagatcacatcaatagtataactttataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 24767518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 1859031 - 1858950
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||| ||||||||||||| ||| | ||||||||||    
T  1859031 cagatcacaacaacattat-acttcataacaacaatt-catttcaacaacatcataatcattcaataatatttcaagtaatgca 1858950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 20767028 - 20767117
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||| |||||||||||| ||| | ||||||||||||| |||| |||||||||||||  |||||||||||  || | ||||||||||    
T  20767028 agcataggcaaatcacaacaacaacataagttcataatatcaa-ttca-ttcaacaacatctagatcattcaataacatttcaagtaatgca 20767117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 21366719 - 21366638
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| | ||||||||||    
T  21366719 cagatcacaacaacattat-acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgca 21366638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 23451410 - 23451491
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||||| ||||||| | ||||||||||||| ||||||||||||| ||| | ||||||||||    
T  23451410 cagatcacaacaacattat-acttcataacatcaatt-cttttcaacaacatcataatcattcaataatatttcaagtaatgca 23451491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 20910843 - 20910790
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaa 76  Q
    ||||||||||| | ||||||||||||||| |||||||||||||| | |||||||    
T  20910843 aacagcatgacataataatatcaatttcaattcaacaacatcttgaacattcaa 20910790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 20805606 - 20805695
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||||| ||||  || | ||||||||||||| |||| |||||||||||||  |||||||||||  || | ||||||||||    
T  20805606 agcataggcagatcacaagaacaaaataatttcataatatcaa-ttca-ttcaacaacatctagatcattcaataacatttcaagtaatgca 20805695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 23458643 - 23458735
Alignment:
Q  1 agaagcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||  |||||||||||||||  || ||||||||| | ||||| | |||||||| |||| ||||||||||||| ||| | ||||||||||    
T  23458643 agaagcataatcagatcacaacaacactat-acttcataacagcaatt-cttttcaacagcatcataatcattcaataatatttcaagtaatgca 23458735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 23462904 - 23462996
Alignment:
Q  1 agaagcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||  |||||||||||||||  || ||||||||| | ||||| | |||||||| |||| ||||||||||||| ||| | ||||||||||    
T  23462904 agaagcataatcagatcacaacaacactat-acttcataacagcaatt-cttttcaacagcatcataatcattcaataatatttcaagtaatgca 23462996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 18356390 - 18356462
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||  | ||||||||||||||| |||||||||||||| |  ||||||   | ||||||||||||||    
T  18356390 aacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgca 18356462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 18356042 - 18356089
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  18356042 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 18356089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 20911191 - 20911144
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  20911191 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 20911144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 21729106 - 21729063
Alignment:
Q  25 cagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    ||||||||| | |||||||||||| || ||||||||||||||||    
T  21729106 cagcatgacataataatatcaattgcaattcaacaacatcttaa 21729063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 21808431 - 21808388
Alignment:
Q  25 cagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    ||||||||| | |||||||||||| || ||||||||||||||||    
T  21808431 cagcatgacataataatatcaattgcaattcaacaacatcttaa 21808388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 54; Significance: 1e-22; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 54; E-Value: 1e-22
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 18718 - 18630
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatg 93  Q
    |||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||| ||||||||||| ||| | ||||||||    
T  18718 agcataggcagatcacaacaacagaataacttcataatatcaa-ttcgtttcaacaacatcttgatcattcaataatatttcaagtaatg 18630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-21; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-21
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 12321796 - 12321714
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| ||| ||| | ||||||||||    
T  12321796 cagatcacaacaacagcataacttcataatatcaa-ttcatttcaacaacatcttgatcattccataatatttcaagtaatgca 12321714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 2760193 - 2760276
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || |||||||||||||||||   ||||||||||||| | ||||||||||| ||||| ||||||||||    
T  2760193 cagatcacaacaacattataacttcataatatcaattcattttcaacaacatcatgatcattcaataatatctcaagtaatgca 2760276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 39267934 - 39267872
Alignment:
Q  32 acttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  39267934 acttcataatatcaatt-catttcaacaacatcttgatcattcaatactatttcaagtaatgca 39267872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 14429945 - 14430026
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||| || ||||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| | ||||||||||    
T  14429945 cagatcacaacaacagtat-acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgca 14430026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 3271885 - 3271967
Alignment:
Q  12 cagatcacaacaacagcatgacttcataa-tatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||| |||||||||| || |||||||| ||| | ||||||||||    
T  3271885 cagatcacaacaacagcataacttcataattatcaa-ttcatttctacaacatcttgattattcaataatat-tcaagtaatgca 3271967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 2832476 - 2832414
Alignment:
Q  32 acttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  2832476 actttataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 2832414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 9751788 - 9751728
Alignment:
Q  34 ttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||| ||| | ||||||||||    
T  9751788 ttcataatatcaatt-cattccaacaacatcttgatcattcaataatatttcaagtaatgca 9751728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 7519378 - 7519331
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  7519378 ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 7519331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 40443467 - 40443511
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatctta 67  Q
    ||||||||||| | ||||||||||||||| |||| ||||||||||    
T  40443467 aacagcatgacataataatatcaatttcaattcatcaacatctta 40443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 2530182 - 2530139
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatctt 66  Q
    |||| |||||| | ||||||||||||||| ||||||||||||||    
T  2530182 aacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 13918800 - 13918753
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  13918800 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 13918753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 14932797 - 14932738
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttc-atttcaacaaca 62  Q
    |||||||| |||| ||||||| |||||||| | |||||||||||| | ||||||||||||    
T  14932797 agcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaaca 14932738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15356232 - 15356173
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttc-atttcaacaaca 62  Q
    |||||||| |||| ||||||| |||||||| | |||||||||||| | ||||||||||||    
T  15356232 agcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaaca 15356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15360346 - 15360287
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttc-atttcaacaaca 62  Q
    |||||||| |||| ||||||| |||||||| | |||||||||||| | ||||||||||||    
T  15360346 agcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaaca 15360287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 25927523 - 25927476
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  25927523 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 25927476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 26212075 - 26212118
Alignment:
Q  25 cagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    ||||||||| | |||||||||||| || ||||||||||||||||    
T  26212075 cagcatgacataataatatcaattgcaattcaacaacatcttaa 26212118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 50; Significance: 3e-20; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 50; E-Value: 3e-20
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 33608 - 33692
Alignment:
Q  11 gcagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| || |||||||| ||||| ||||||||||    
T  33608 gcagatcacaacaacagcataacttcataattatcaatt-catttcaacaacatcttgattattcaataatatctcaagtaatgca 33692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 48; Significance: 5e-19; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 6363 - 6281
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||| ||||||||||| ||| | ||||||||||    
T  6363 cagatcacaacaacatcataacttcataatatcaa-ttcatttcaacaacttcttgatcattcaataatatttcaagtaatgca 6281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 48; Significance: 5e-19; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 4492 - 4574
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||| ||| ||| | ||||||||||    
T  4492 cagatcacaacaacagcataatttcataatatcaa-ttcatttcaacaacatcttgatcattcgataatatttcaagtaatgca 4574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 48; Significance: 5e-19; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 5648 - 5730
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| | |||||||||||||||   ||||||||||||||| ||||||||||| ||||| ||||||||||    
T  5648 cagatcacaacaacagcat-agttcataatatcaattcattttcaacaacatcttgatcattcaataatatctcaagtaatgca 5730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 6843 - 6925
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| | |||||||||||||||   ||||||||||||||| ||||||||||| ||||| ||||||||||    
T  6843 cagatcacaacaacagcat-agttcataatatcaattcattttcaacaacatcttgatcattcaataatatctcaagtaatgca 6925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 48; Significance: 5e-19; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 6477 - 6387
Alignment:
Q  4 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  6477 agcataggaagatcacaacaatagcataatttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 48; Significance: 5e-19; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 15149 - 15230
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  15149 cagatcacaaca-cagcataacttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 15230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 48; Significance: 5e-19; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 48; E-Value: 5e-19
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 351 - 434
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||||| | ||||||||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  351 cagatcacaacaacaatataacttcataacaacaatttcatttcaacaacatcttgatcattcaataatatttaaagtaatgca 434  T

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Target: scaffold0280 (Bit Score: 46; Significance: 9e-18; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 46; E-Value: 9e-18
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 19344 - 19264
Alignment:
Q  15 atcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||||||| || |||||||| ||||| ||||||||||    
T  19344 atcacaacaacagcataacttcataattatcaatt-catttcaacaacatcttgattattcaataatatctcaagtaatgca 19264  T

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Target: scaffold0037 (Bit Score: 45; Significance: 3e-17; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 3e-17
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 21623 - 21544
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaat 92  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||||||||||| ||||||||||| ||| | |||||||    
T  21623 cagatcacaacaacattataacttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaat 21544  T

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Target: scaffold1296 (Bit Score: 44; Significance: 1e-16; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 455 - 537
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||||| ||||||||||| ||| | ||||||||||    
T  455 cagatcacaacagcagcataacttcataatatcaa-ttcttttcaacgacatcttgatcattcaataatatttcaagtaatgca 537  T

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Target: scaffold0425 (Bit Score: 44; Significance: 1e-16; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 44; E-Value: 1e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 221 - 304
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| ||||| ||| |||||||||||||||||   ||||||||||||||| ||||||||||| ||| | ||||||||||    
T  221 cagatcacatcaacaacataacttcataatatcaattcattttcaacaacatcttgatcattcaataatatttcaagtaatgca 304  T

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Target: scaffold0615 (Bit Score: 42; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 42; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 2139 - 2075
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaat 77  Q
    ||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||| ||||||||||    
T  2139 cagatcacaacaacaacataacttcataatatcaa-tccatttcaacaacatcttgatcattcaat 2075  T

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Target: scaffold0216 (Bit Score: 41; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 41; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 17166 - 17083
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttc-aacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||| | ||||||||| ||| | ||||||||||    
T  17166 cagatcacatcaacagcataacttcataatatcaatt-catttccaacaacatcttgaacattcaataatatttcaagtaatgca 17083  T

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Target: scaffold1326 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 1544 - 1462
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  1544 cagatcacaacaacattataacttcataacaacaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 1462  T

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Target: scaffold0166 (Bit Score: 40; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 10097 - 10015
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| ||| || || |||| |||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  10097 cagatcacatcaatagtataactttataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 10015  T

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Target: scaffold1052 (Bit Score: 36; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 2967 - 3049
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||| |||||  || |||| ||||||||||||  |||||||||||||||| ||||||||||| ||| | ||||||||||    
T  2967 cagatcacatcaacaatataactttataatatcaatta-atttcaacaacatcttgatcattcaataatatttcaagtaatgca 3049  T

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Target: scaffold0456 (Bit Score: 36; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 10471 - 10424
Alignment:
Q  21 acaacagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||    
T  10471 acaacagcatgacataataatatcaatttcaattcaacaacatcttaa 10424  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 73821 - 73740
Alignment:
Q  12 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||||  || ||||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| | ||||||||||    
T  73821 cagatcacaacaacattat-acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgca 73740  T

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Target: scaffold0393 (Bit Score: 32; Significance: 0.000000002; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 1575 - 1637
Alignment:
Q  32 acttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| | ||||||||||    
T  1575 acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgca 1637  T

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Target: scaffold0107 (Bit Score: 32; Significance: 0.000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 15460 - 15417
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatctt 66  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||    
T  15460 aacagcatgacataataatatcaatttcaattcaacaacatctt 15417  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 174839 - 174893
Alignment:
Q  21 acaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattca 75  Q
    ||||||||||||| | || ||||||| |||| ||||||||||||| |||||||||    
T  174839 acaacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattca 174893  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.00000003; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 33001 - 32956
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    ||||||||||| | |||||||||||| || ||||||||||||||||    
T  33001 aacagcatgacataataatatcaattgcaattcaacaacatcttaa 32956  T

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Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 46004 - 46049
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatcttaa 68  Q
    ||||||||||| | |||||||||||| || ||||||||||||||||    
T  46004 aacagcatgacataataatatcaattgcaattcaacaacatcttaa 46049  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 30795 - 30716
Alignment:
Q  14 gatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    |||||||||||||  || ||||||||| | ||||| ||||||||| ||||||| ||||||||||| ||| | ||||||||||    
T  30795 gatcacaacaacattat-acttcataacaacaatt-catttcaactacatctttatcattcaataatatttcaagtaatgca 30716  T

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Target: scaffold0051 (Bit Score: 28; Significance: 0.0000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 30969 - 31016
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  30969 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 31016  T

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Target: scaffold0003 (Bit Score: 28; Significance: 0.0000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 71147 - 71194
Alignment:
Q  48 ttcatttcaacaacatcttaatcattcaatactatcttaagtaatgca 95  Q
    ||||||||||||||||||| ||||||||||| ||| | || |||||||    
T  71147 ttcatttcaacaacatcttgatcattcaataatatttaaaataatgca 71194  T

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Target: scaffold0003; HSP #2
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 71376 - 71419
Alignment:
Q  23 aacagcatgacttcataatatcaatttcatttcaacaacatctt 66  Q
    ||||||||||| | ||| ||||||||||| ||||||||||||||    
T  71376 aacagcatgacataatattatcaatttcaattcaacaacatctt 71419  T

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Target: scaffold0001 (Bit Score: 28; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 28; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 422585 - 422523
Alignment:
Q  13 agatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaa 76  Q
    |||||||||||||| ||| | ||||||| | ||||| ||||||||||||||||  |||||||||    
T  422585 agatcacaacaacatcataatttcataacaacaatt-catttcaacaacatctagatcattcaa 422523  T

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