View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5806-4 (Length: 150)
Name: Solexa-NF5806-4
Description: NF5806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5806-4 |
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Alignment Details
Target: chr3 (Bit Score: 129; Significance: 4e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 129; E-Value: 4e-67
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45363599 - 45363747
Alignment:
| Q |
1 |
gatatgagaaccccctagaattataagtcacgcttattgggtgactcactcttgtgtgtaataaaaatgcacacaagtttgagatccattgttcttaaca |
100 |
Q |
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| T |
45363599 |
gatatgagaaccccctaaaattataagccacgcttattgggtgactcactctcgtgtgtaataaaaatgcacacaagtttgagatccactgttcttaaca |
45363698 |
T |
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| Q |
101 |
gctgcatatccatgatacttcaatcaactataaattttgtgcctatgct |
149 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
45363699 |
gctgcaaatccatgatacttcaatcaactataaattttgtgcctatgct |
45363747 |
T |
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