View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5808-17 (Length: 132)

Name: Solexa-NF5808-17
Description: NF5808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5808-17
Solexa-NF5808-17
[»] chr8 (4 HSPs)
chr8 (1-76)||(10225017-10225092)
chr8 (79-132)||(38404125-38404178)
chr8 (74-111)||(44843323-44843360)
chr8 (74-111)||(28130831-28130868)
[»] chr1 (12 HSPs)
chr1 (73-132)||(46323200-46323259)
chr1 (1-76)||(3321161-3321247)
chr1 (72-125)||(7731056-7731109)
chr1 (72-125)||(41771176-41771229)
chr1 (75-111)||(11166958-11166994)
chr1 (71-111)||(41767803-41767843)
chr1 (75-111)||(50985594-50985630)
chr1 (76-111)||(7733688-7733723)
chr1 (76-111)||(46388014-46388049)
chr1 (77-110)||(7698840-7698873)
chr1 (75-111)||(4297342-4297378)
chr1 (75-111)||(37381550-37381586)
[»] chr4 (4 HSPs)
chr4 (75-132)||(14198528-14198585)
chr4 (72-112)||(37082649-37082689)
chr4 (75-112)||(54959897-54959934)
chr4 (75-111)||(36040814-36040850)
[»] chr7 (5 HSPs)
chr7 (82-132)||(46742743-46742793)
chr7 (75-132)||(34346780-34346837)
chr7 (75-112)||(22883052-22883089)
chr7 (72-125)||(46369656-46369709)
chr7 (74-111)||(29054690-29054727)
[»] chr3 (6 HSPs)
chr3 (75-132)||(36100492-36100549)
chr3 (75-118)||(52275643-52275686)
chr3 (74-112)||(54760426-54760464)
chr3 (75-111)||(12007168-12007204)
chr3 (75-111)||(26066961-26066997)
chr3 (72-125)||(21631377-21631430)
[»] chr6 (1 HSPs)
chr6 (74-132)||(30698582-30698640)
[»] scaffold2013 (1 HSPs)
scaffold2013 (72-125)||(719-772)
[»] chr5 (4 HSPs)
chr5 (72-125)||(20405077-20405130)
chr5 (75-112)||(125613-125650)
chr5 (74-111)||(20407698-20407735)
chr5 (72-125)||(34992310-34992363)
[»] chr2 (2 HSPs)
chr2 (75-111)||(13098273-13098309)
chr2 (75-111)||(29609156-29609192)


Alignment Details
Target: chr8 (Bit Score: 68; Significance: 9e-31; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 9e-31
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10225017 - 10225092
Alignment:
Q  1 agatcgcgaaatttaacacttcgcagtgatgaaacaaactacaaaagagaaatatggtaactccgtgattttatat 76  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10225017 agatcgcgaaatttaatacttcgcagtgatgaaacaaactacgaaagagaaatatggtaactccgtgattttatat 10225092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 38404125 - 38404178
Alignment:
Q  79 ctcttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 132  Q
    ||||||||||||||| | |||||| |||||||| ||||||||||||||||||||    
T  38404125 ctcttaatataagaaagaaagatgctgtggaaagcttatttttgcccatcaatg 38404178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 44843360 - 44843323
Alignment:
Q  74 tatctctcttaatataagaagggaagatgttgtggaaa 111  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  44843360 tatctctcttaatataagaagagaagatgttgtggaaa 44843323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 28130868 - 28130831
Alignment:
Q  74 tatctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  28130868 tatctctcttaataaaagaagagaagatgttgtggaaa 28130831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 5e-26; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 46323259 - 46323200
Alignment:
Q  73 atatctctcttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46323259 atatctctcttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 46323200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3321161 - 3321247
Alignment:
Q  1 agatcgcgaaatttaacacttcgcag---tgatgaaacaaactacaaa--------agagaaatatggtaactccgtgattttatat 76  Q
    ||||||||||||||||||||||||||   |||||||||||||||| ||        |||||||||||||||||||||||||||||||    
T  3321161 agatcgcgaaatttaacacttcgcagcagtgatgaaacaaactacgaatgaatgaaagagaaatatggtaactccgtgattttatat 3321247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 7731109 - 7731056
Alignment:
Q  72 tatatctctcttaatataagaagggaagatgttgtggaaaacttatttttgccc 125  Q
    ||||||||||||||||||||||| |||||| ||||||||||  ||||| |||||    
T  7731109 tatatctctcttaatataagaagagaagatattgtggaaaatatatttatgccc 7731056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 41771176 - 41771229
Alignment:
Q  72 tatatctctcttaatataagaagggaagatgttgtggaaaacttatttttgccc 125  Q
    ||||| ||||||||||||||||| |||||||||||||||||  ||||| |||||    
T  41771176 tatatatctcttaatataagaagagaagatgttgtggaaaatatatttatgccc 41771229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 11166994 - 11166958
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||||||||| ||||||||||||||||    
T  11166994 atctctcttaatataagaagagaagatgttgtggaaa 11166958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 41767803 - 41767843
Alignment:
Q  71 ttatatctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  41767803 ttatatctctcttaatataagaagagaaaatgttgtggaaa 41767843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 50985594 - 50985630
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||||||||| ||||||||||||||||    
T  50985594 atctctcttaatataagaagagaagatgttgtggaaa 50985630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 7733723 - 7733688
Alignment:
Q  76 tctctcttaatataagaagggaagatgttgtggaaa 111  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7733723 tctctcttaatataagaagagaagatgttgtggaaa 7733688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 46388049 - 46388014
Alignment:
Q  76 tctctcttaatataagaagggaagatgttgtggaaa 111  Q
    ||||||||||||||||||| ||||||||||||||||    
T  46388049 tctctcttaatataagaagagaagatgttgtggaaa 46388014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 7698840 - 7698873
Alignment:
Q  77 ctctcttaatataagaagggaagatgttgtggaa 110  Q
    |||||||||||||||||| |||||||||||||||    
T  7698840 ctctcttaatataagaagagaagatgttgtggaa 7698873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 4297378 - 4297342
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  4297378 atctctcttgatataagaagagaagatgttgtggaaa 4297342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 37381550 - 37381586
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  37381550 atctctattaatataagaagagaagatgttgtggaaa 37381586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 8e-25; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 14198528 - 14198585
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14198528 atctctcttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 14198585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 37082649 - 37082689
Alignment:
Q  72 tatatctctcttaatataagaagggaagatgttgtggaaaa 112  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  37082649 tatatctctcttaatataagaagagaagatgttgtggaaaa 37082689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 54959897 - 54959934
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaaa 112  Q
    |||||||||||||||||||| |||||||||||||||||    
T  54959897 atctctcttaatataagaagagaagatgttgtggaaaa 54959934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 36040850 - 36040814
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||||||||| ||||||||||||||||    
T  36040850 atctctcttaatataagaagagaagatgttgtggaaa 36040814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 1e-20; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 46742793 - 46742743
Alignment:
Q  82 ttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46742793 ttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 46742743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 34346837 - 34346780
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 132  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||    
T  34346837 atctctcttaatataagaagagaagatgttgtggaaaactaatttatgcgcatcaatg 34346780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 22883089 - 22883052
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22883089 atctctcttaatataagaagggaagatgttgtggaaaa 22883052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 46369709 - 46369656
Alignment:
Q  72 tatatctctcttaatataagaagggaagatgttgtggaaaacttatttttgccc 125  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||| |||||    
T  46369709 tatatctctcttaatataagaagagaagatgttgtggaaaatatatttatgccc 46369656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 29054727 - 29054690
Alignment:
Q  74 tatctctcttaatataagaagggaagatgttgtggaaa 111  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  29054727 tatctctcttaatataagaagagaagatgttgtggaaa 29054690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 5e-20; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 36100549 - 36100492
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 132  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  36100549 atctctcttaatttaagaagggaagatgttgtggaagacttatttttgcccatcaatg 36100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 52275643 - 52275686
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaaacttatt 118  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  52275643 atctctcttaatataagaagagaagatgttgtggaaaacctatt 52275686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 112
Target Start/End: Original strand, 54760426 - 54760464
Alignment:
Q  74 tatctctcttaatataagaagggaagatgttgtggaaaa 112  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  54760426 tatctctcttaatataagaagagaagatgttgtggaaaa 54760464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 12007168 - 12007204
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||||||||| ||||||||||||||||    
T  12007168 atctctcttaatataagaagagaagatgttgtggaaa 12007204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 26066997 - 26066961
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||||||||| ||||||||||||||||    
T  26066997 atctctcttaatataagaagagaagatgttgtggaaa 26066961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 21631377 - 21631430
Alignment:
Q  72 tatatctctcttaatataagaagggaagatgttgtggaaaacttatttttgccc 125  Q
    ||||||||||||||| ||||||| ||||||||||| |||||  ||||| |||||    
T  21631377 tatatctctcttaatgtaagaagagaagatgttgtagaaaatatatttatgccc 21631430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 3e-18; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 30698640 - 30698582
Alignment:
Q  74 tatctctcttaatataagaagggaagatgttgtggaaaacttatttttgcccatcaatg 132  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  30698640 tatctctcttaatataagaagagaagatgttgtggaaaattcatttttgcccatcaatg 30698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2013 (Bit Score: 38; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold2013
Description:

Target: scaffold2013; HSP #1
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 719 - 772
Alignment:
Q  72 tatatctctcttaatataagaagggaagatgttgtggaaaacttatttttgccc 125  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||| |||||    
T  719 tatatctctcttaatataagaagagaagatgttgtggaaaatatatttatgccc 772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.0000000000007; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 20405130 - 20405077
Alignment:
Q  72 tatatctctcttaatataagaagggaagatgttgtggaaaacttatttttgccc 125  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||| |||||    
T  20405130 tatatctctcttaatataagaagagaagatgttgtggaaaatatatttatgccc 20405077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 125650 - 125613
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaaa 112  Q
    |||||||||||||||||||| |||||||||||||||||    
T  125650 atctctcttaatataagaagagaagatgttgtggaaaa 125613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 20407735 - 20407698
Alignment:
Q  74 tatctctcttaatataagaagggaagatgttgtggaaa 111  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  20407735 tatctctcttaatataagaagagaagatgttgtggaaa 20407698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 34992310 - 34992363
Alignment:
Q  72 tatatctctcttaatataagaagggaagatgttgtggaaaacttatttttgccc 125  Q
    ||||| ||||||||||||||||| |||||||||||||||||  ||||| |||||    
T  34992310 tatatatctcttaatataagaagagaagatgttgtggaaaatatatttatgccc 34992363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.0000000007; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 13098273 - 13098309
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||||||||| ||||||||||||||||    
T  13098273 atctctcttaatataagaagagaagatgttgtggaaa 13098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 29609192 - 29609156
Alignment:
Q  75 atctctcttaatataagaagggaagatgttgtggaaa 111  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29609192 atctctcttaatataagaagagaagatgttgtggaaa 29609156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University