View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5808-2 (Length: 236)

Name: Solexa-NF5808-2
Description: NF5808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5808-2
Solexa-NF5808-2
[»] chr5 (49 HSPs)
chr5 (8-236)||(38464291-38464519)
chr5 (91-212)||(21190998-21191128)
chr5 (59-214)||(2436877-2437030)
chr5 (91-217)||(6247609-6247732)
chr5 (91-156)||(3966490-3966555)
chr5 (162-214)||(7677783-7677835)
chr5 (91-138)||(30183536-30183583)
chr5 (86-148)||(31084305-31084367)
chr5 (166-215)||(14873593-14873642)
chr5 (91-212)||(16203746-16203867)
chr5 (91-160)||(39698528-39698597)
chr5 (91-148)||(41995458-41995515)
chr5 (166-214)||(2419938-2419986)
chr5 (85-157)||(12264835-12264907)
chr5 (162-202)||(15382552-15382592)
chr5 (166-214)||(19820328-19820376)
chr5 (179-214)||(2548464-2548499)
chr5 (179-214)||(14674333-14674368)
chr5 (163-214)||(17123116-17123166)
chr5 (95-138)||(26716135-26716178)
chr5 (95-138)||(26985875-26985918)
chr5 (86-156)||(11685921-11685991)
chr5 (91-133)||(14674256-14674298)
chr5 (91-133)||(19579688-19579730)
chr5 (168-214)||(19737421-19737467)
chr5 (160-214)||(35017108-35017162)
chr5 (168-214)||(39698625-39698671)
chr5 (166-216)||(43564952-43565002)
chr5 (91-128)||(5873548-5873585)
chr5 (169-214)||(16304366-16304411)
chr5 (179-212)||(18421779-18421812)
chr5 (91-156)||(27144450-27144515)
chr5 (95-156)||(28588681-28588742)
chr5 (166-211)||(39268541-39268586)
chr5 (164-217)||(39342511-39342564)
chr5 (177-213)||(3966596-3966632)
chr5 (111-155)||(6471897-6471941)
chr5 (91-139)||(6770530-6770578)
chr5 (91-139)||(9449456-9449504)
chr5 (169-217)||(15086552-15086600)
chr5 (166-202)||(17088362-17088398)
chr5 (166-214)||(19429498-19429546)
chr5 (166-214)||(19552476-19552524)
chr5 (162-214)||(21194063-21194115)
chr5 (166-214)||(21576685-21576733)
chr5 (166-214)||(30098408-30098456)
chr5 (166-214)||(32766872-32766920)
chr5 (93-133)||(33178014-33178054)
chr5 (166-214)||(36640260-36640308)
[»] chr1 (58 HSPs)
chr1 (86-223)||(22881558-22881693)
chr1 (110-215)||(7918153-7918264)
chr1 (166-216)||(9828126-9828176)
chr1 (166-212)||(1486646-1486692)
chr1 (91-156)||(9709807-9709872)
chr1 (91-156)||(17831538-17831603)
chr1 (91-156)||(36878448-36878513)
chr1 (91-215)||(37598819-37598951)
chr1 (166-214)||(18190048-18190096)
chr1 (60-148)||(24577201-24577289)
chr1 (93-153)||(34298425-34298485)
chr1 (91-138)||(10572614-10572661)
chr1 (101-160)||(25361883-25361942)
chr1 (166-217)||(42325630-42325681)
chr1 (86-209)||(3490352-3490467)
chr1 (166-216)||(5898204-5898254)
chr1 (166-216)||(40917831-40917881)
chr1 (166-212)||(42359391-42359437)
chr1 (94-214)||(113289-113412)
chr1 (91-156)||(398772-398837)
chr1 (180-213)||(5376448-5376481)
chr1 (86-127)||(6427443-6427484)
chr1 (91-139)||(609482-609530)
chr1 (91-139)||(1262871-1262919)
chr1 (91-139)||(2896145-2896193)
chr1 (162-214)||(5944361-5944413)
chr1 (91-155)||(6427337-6427401)
chr1 (91-139)||(15641054-15641102)
chr1 (166-214)||(19562556-19562603)
chr1 (168-216)||(21365990-21366038)
chr1 (162-214)||(22515827-22515879)
chr1 (162-214)||(47989575-47989627)
chr1 (93-156)||(1486716-1486779)
chr1 (166-213)||(10233327-10233374)
chr1 (96-139)||(12443484-12443527)
chr1 (171-218)||(22947806-22947853)
chr1 (59-122)||(35702629-35702692)
chr1 (102-156)||(1864887-1864941)
chr1 (166-216)||(9690211-9690261)
chr1 (96-150)||(14332655-14332709)
chr1 (166-212)||(16297223-16297269)
chr1 (164-214)||(22794018-22794068)
chr1 (166-216)||(29144318-29144368)
chr1 (102-148)||(32434731-32434777)
chr1 (162-215)||(1815324-1815377)
chr1 (166-215)||(6427546-6427595)
chr1 (91-148)||(28273103-28273160)
chr1 (91-148)||(38078676-38078733)
chr1 (166-215)||(46940747-46940796)
chr1 (96-156)||(9828036-9828096)
chr1 (91-127)||(13011252-13011288)
chr1 (166-214)||(15323239-15323287)
chr1 (91-155)||(19562629-19562693)
chr1 (163-214)||(25361963-25362012)
chr1 (92-148)||(31015031-31015087)
chr1 (164-220)||(40747701-40747757)
chr1 (166-214)||(43113005-43113053)
chr1 (178-214)||(48450550-48450586)
[»] chr6 (59 HSPs)
chr6 (91-213)||(31959146-31959268)
chr6 (91-214)||(9027165-9027286)
chr6 (111-211)||(9025448-9025546)
chr6 (95-214)||(34595125-34595253)
chr6 (166-218)||(8776904-8776956)
chr6 (91-149)||(34290091-34290149)
chr6 (91-214)||(7938103-7938219)
chr6 (166-211)||(8389411-8389456)
chr6 (91-215)||(16833295-16833428)
chr6 (162-211)||(32978842-32978891)
chr6 (93-195)||(34172182-34172288)
chr6 (166-214)||(7248440-7248488)
chr6 (91-147)||(7930292-7930348)
chr6 (166-214)||(9107299-9107347)
chr6 (91-150)||(7996391-7996450)
chr6 (91-150)||(8022351-8022410)
chr6 (93-156)||(19040341-19040404)
chr6 (162-216)||(10339052-10339106)
chr6 (91-156)||(7265600-7265665)
chr6 (166-219)||(8365443-8365496)
chr6 (91-148)||(8776988-8777045)
chr6 (91-148)||(10770689-10770746)
chr6 (91-160)||(12696311-12696380)
chr6 (163-216)||(13364643-13364696)
chr6 (91-148)||(16766684-16766741)
chr6 (91-156)||(19044451-19044516)
chr6 (169-214)||(34073278-34073323)
chr6 (91-139)||(7801180-7801228)
chr6 (166-214)||(24645552-24645600)
chr6 (94-133)||(853889-853928)
chr6 (167-214)||(3209471-3209518)
chr6 (91-138)||(8365544-8365591)
chr6 (91-150)||(9658866-9658925)
chr6 (90-148)||(1681744-1681802)
chr6 (162-216)||(4878010-4878063)
chr6 (112-150)||(5462694-5462732)
chr6 (178-216)||(10294201-10294239)
chr6 (166-212)||(12696400-12696446)
chr6 (161-219)||(12868611-12868669)
chr6 (166-216)||(17327588-17327638)
chr6 (92-158)||(17341669-17341735)
chr6 (91-133)||(17841619-17841661)
chr6 (162-220)||(18367914-18367972)
chr6 (95-156)||(9629374-9629435)
chr6 (164-213)||(24807113-24807162)
chr6 (171-212)||(26178620-26178661)
chr6 (91-156)||(26562676-26562741)
chr6 (111-156)||(30866151-30866196)
chr6 (107-160)||(31384923-31384976)
chr6 (162-214)||(8714058-8714110)
chr6 (112-156)||(9617442-9617486)
chr6 (166-214)||(9629465-9629513)
chr6 (91-139)||(14796214-14796262)
chr6 (166-214)||(16766779-16766827)
chr6 (177-213)||(27903963-27903999)
chr6 (166-214)||(28152169-28152217)
chr6 (112-156)||(32299283-32299327)
chr6 (174-214)||(32839571-32839611)
chr6 (166-214)||(34894968-34895016)
[»] chr7 (50 HSPs)
chr7 (91-216)||(35861951-35862072)
chr7 (166-214)||(21864879-21864927)
chr7 (91-159)||(22868029-22868097)
chr7 (166-214)||(40131939-40131987)
chr7 (166-217)||(5409768-5409819)
chr7 (166-213)||(32287404-32287451)
chr7 (91-210)||(40287306-40287428)
chr7 (91-160)||(32308107-32308176)
chr7 (166-214)||(1433530-1433578)
chr7 (123-215)||(35749915-35750007)
chr7 (166-217)||(9778576-9778627)
chr7 (162-213)||(20545185-20545236)
chr7 (91-214)||(24105665-24105797)
chr7 (111-215)||(1401032-1401143)
chr7 (166-219)||(6490787-6490840)
chr7 (91-156)||(6630919-6630984)
chr7 (91-148)||(7438693-7438750)
chr7 (166-215)||(15680880-15680929)
chr7 (91-156)||(15902809-15902874)
chr7 (91-148)||(27945028-27945085)
chr7 (166-214)||(598279-598327)
chr7 (166-214)||(17852071-17852119)
chr7 (162-214)||(21880219-21880271)
chr7 (186-218)||(23128599-23128631)
chr7 (168-220)||(24339726-24339778)
chr7 (166-214)||(43027404-43027452)
chr7 (101-156)||(19206047-19206102)
chr7 (162-201)||(32308198-32308237)
chr7 (90-156)||(20549777-20549843)
chr7 (102-139)||(3991322-3991359)
chr7 (99-160)||(5548671-5548732)
chr7 (91-156)||(5835234-5835299)
chr7 (95-156)||(11665447-11665508)
chr7 (161-214)||(14729769-14729822)
chr7 (91-160)||(18013077-18013146)
chr7 (91-160)||(21828408-21828477)
chr7 (95-148)||(24339633-24339686)
chr7 (95-148)||(25481893-25481946)
chr7 (162-214)||(2334327-2334379)
chr7 (112-160)||(4909159-4909207)
chr7 (166-214)||(7133212-7133260)
chr7 (162-202)||(10043011-10043051)
chr7 (91-139)||(11722122-11722170)
chr7 (104-156)||(19992001-19992053)
chr7 (166-214)||(29763129-29763177)
chr7 (101-149)||(29787383-29787431)
chr7 (107-155)||(35297680-35297728)
chr7 (170-214)||(38134335-38134379)
chr7 (166-214)||(38804489-38804537)
chr7 (177-213)||(49107887-49107923)
[»] chr2 (36 HSPs)
chr2 (162-214)||(18840953-18841005)
chr2 (91-213)||(35449500-35449627)
chr2 (166-219)||(37419825-37419878)
chr2 (162-212)||(2438661-2438711)
chr2 (110-215)||(18622612-18622722)
chr2 (162-213)||(27286222-27286273)
chr2 (91-149)||(21782832-21782890)
chr2 (94-156)||(37411251-37411313)
chr2 (91-156)||(20242734-20242799)
chr2 (91-155)||(21616749-21616813)
chr2 (166-214)||(24975255-24975303)
chr2 (166-214)||(26769593-26769641)
chr2 (91-214)||(37558964-37559096)
chr2 (166-214)||(38117099-38117147)
chr2 (61-133)||(38117189-38117261)
chr2 (166-214)||(42511322-42511370)
chr2 (93-156)||(12668430-12668493)
chr2 (93-156)||(18420441-18420504)
chr2 (90-149)||(31284034-31284093)
chr2 (166-213)||(44860402-44860449)
chr2 (91-149)||(18276508-18276566)
chr2 (180-214)||(19580225-19580259)
chr2 (86-136)||(26769493-26769543)
chr2 (162-212)||(36756275-36756325)
chr2 (103-148)||(974746-974791)
chr2 (166-215)||(15972944-15972993)
chr2 (91-120)||(20473309-20473338)
chr2 (173-214)||(22084756-22084797)
chr2 (91-156)||(23718013-23718078)
chr2 (91-156)||(24105685-24105750)
chr2 (91-156)||(36756351-36756416)
chr2 (166-214)||(11223793-11223841)
chr2 (166-214)||(21782744-21782792)
chr2 (110-150)||(25846747-25846787)
chr2 (166-218)||(34006926-34006978)
chr2 (166-214)||(41843517-41843565)
[»] chr8 (47 HSPs)
chr8 (166-217)||(29510230-29510281)
chr8 (86-215)||(8342956-8343087)
chr8 (166-214)||(22652058-22652106)
chr8 (166-214)||(40064033-40064081)
chr8 (91-214)||(36450694-36450826)
chr8 (172-214)||(16641909-16641951)
chr8 (79-156)||(4786345-4786422)
chr8 (166-215)||(8343398-8343447)
chr8 (91-214)||(13436910-13437036)
chr8 (91-156)||(15816136-15816201)
chr8 (166-215)||(38487156-38487205)
chr8 (162-214)||(11803337-11803389)
chr8 (166-210)||(12559044-12559088)
chr8 (111-160)||(3025558-3025607)
chr8 (168-217)||(4673351-4673400)
chr8 (91-156)||(20679402-20679467)
chr8 (166-215)||(30067967-30068016)
chr8 (91-139)||(22651963-22652011)
chr8 (103-139)||(29447134-29447170)
chr8 (166-214)||(29447526-29447574)
chr8 (96-156)||(31236584-31236644)
chr8 (175-214)||(25566910-25566949)
chr8 (163-198)||(44462151-44462186)
chr8 (163-198)||(44469684-44469719)
chr8 (86-156)||(13844603-13844673)
chr8 (168-214)||(15816058-15816104)
chr8 (91-157)||(24362208-24362274)
chr8 (166-216)||(27213596-27213646)
chr8 (91-156)||(926795-926860)
chr8 (165-214)||(3454577-3454626)
chr8 (101-150)||(7658460-7658509)
chr8 (178-211)||(13203700-13203733)
chr8 (169-214)||(17751730-17751775)
chr8 (169-214)||(17760717-17760762)
chr8 (91-132)||(24196628-24196669)
chr8 (91-156)||(28883885-28883950)
chr8 (91-132)||(29510335-29510376)
chr8 (111-156)||(34897092-34897137)
chr8 (174-219)||(37283750-37283795)
chr8 (186-214)||(11833941-11833969)
chr8 (164-216)||(13397620-13397672)
chr8 (110-150)||(14134705-14134745)
chr8 (172-212)||(16987990-16988030)
chr8 (166-202)||(22943301-22943337)
chr8 (166-214)||(24413499-24413547)
chr8 (96-156)||(27213539-27213599)
chr8 (91-139)||(41831964-41832012)
[»] chr3 (61 HSPs)
chr3 (93-184)||(13620743-13620834)
chr3 (86-214)||(20503447-20503584)
chr3 (162-216)||(40993273-40993327)
chr3 (162-216)||(49651714-49651768)
chr3 (91-139)||(10954939-10954987)
chr3 (166-214)||(34185052-34185100)
chr3 (91-214)||(55401062-55401194)
chr3 (95-138)||(24633757-24633800)
chr3 (166-217)||(40052383-40052434)
chr3 (166-217)||(52369858-52369909)
chr3 (163-217)||(28812594-28812648)
chr3 (171-213)||(34910393-34910435)
chr3 (86-140)||(40052314-40052368)
chr3 (91-148)||(4987306-4987363)
chr3 (96-160)||(14209105-14209169)
chr3 (166-214)||(17005548-17005596)
chr3 (151-219)||(17276783-17276851)
chr3 (166-214)||(21211365-21211413)
chr3 (166-206)||(21720843-21720883)
chr3 (166-214)||(25074866-25074914)
chr3 (91-155)||(25948895-25948959)
chr3 (166-214)||(27505322-27505370)
chr3 (96-148)||(34910309-34910361)
chr3 (96-217)||(5407196-5407314)
chr3 (163-214)||(8039764-8039815)
chr3 (162-213)||(8789489-8789540)
chr3 (91-138)||(41961675-41961722)
chr3 (167-214)||(51206293-51206340)
chr3 (91-133)||(2620083-2620125)
chr3 (166-212)||(4987222-4987268)
chr3 (91-133)||(10335316-10335358)
chr3 (96-150)||(12703999-12704053)
chr3 (171-217)||(14979225-14979271)
chr3 (86-132)||(21479100-21479146)
chr3 (91-133)||(26290358-26290400)
chr3 (162-212)||(29508517-29508567)
chr3 (86-156)||(35222920-35222990)
chr3 (166-216)||(41961577-41961627)
chr3 (111-160)||(1550147-1550196)
chr3 (173-214)||(3730108-3730149)
chr3 (90-131)||(6525712-6525753)
chr3 (95-156)||(8383248-8383309)
chr3 (102-139)||(8412969-8413006)
chr3 (91-160)||(10268489-10268558)
chr3 (166-211)||(12100340-12100385)
chr3 (91-140)||(14829677-14829725)
chr3 (95-156)||(32804547-32804608)
chr3 (164-213)||(37077439-37077488)
chr3 (111-160)||(49505157-49505206)
chr3 (162-202)||(6525635-6525675)
chr3 (174-214)||(8903514-8903554)
chr3 (90-138)||(9800026-9800074)
chr3 (166-214)||(10455867-10455915)
chr3 (186-214)||(11252067-11252095)
chr3 (166-214)||(11610580-11610628)
chr3 (91-139)||(16000040-16000088)
chr3 (166-214)||(18427020-18427068)
chr3 (178-214)||(21861658-21861694)
chr3 (162-218)||(26492141-26492197)
chr3 (166-214)||(27277780-27277827)
chr3 (96-148)||(49651801-49651853)
[»] chr4 (49 HSPs)
chr4 (168-218)||(53381526-53381576)
chr4 (166-216)||(17876237-17876287)
chr4 (103-215)||(5775303-5775418)
chr4 (162-214)||(715545-715597)
chr4 (162-214)||(752871-752923)
chr4 (91-210)||(21945490-21945618)
chr4 (95-214)||(23292926-23293054)
chr4 (91-155)||(36635311-36635375)
chr4 (171-215)||(40784029-40784073)
chr4 (166-213)||(3947702-3947749)
chr4 (167-214)||(37203324-37203371)
chr4 (162-212)||(4157216-4157266)
chr4 (166-216)||(16184902-16184952)
chr4 (166-216)||(19482750-19482800)
chr4 (91-160)||(35723387-35723457)
chr4 (165-215)||(40699886-40699936)
chr4 (166-215)||(944601-944650)
chr4 (91-160)||(3947769-3947838)
chr4 (165-214)||(30103297-30103346)
chr4 (166-210)||(20743210-20743254)
chr4 (103-139)||(24613725-24613761)
chr4 (151-211)||(28084580-28084640)
chr4 (162-214)||(29205535-29205587)
chr4 (175-215)||(30299009-30299049)
chr4 (175-215)||(30327877-30327917)
chr4 (104-156)||(54580030-54580082)
chr4 (175-214)||(1074837-1074876)
chr4 (162-217)||(3064865-3064920)
chr4 (166-217)||(18513172-18513223)
chr4 (91-138)||(19482655-19482702)
chr4 (166-217)||(35161107-35161158)
chr4 (166-216)||(11596295-11596345)
chr4 (164-214)||(11931360-11931410)
chr4 (166-216)||(22234817-22234867)
chr4 (166-216)||(24613628-24613678)
chr4 (102-160)||(38847015-38847073)
chr4 (168-218)||(40224434-40224484)
chr4 (166-207)||(21873309-21873350)
chr4 (166-207)||(21929170-21929211)
chr4 (165-214)||(34515811-34515859)
chr4 (91-156)||(35157992-35158057)
chr4 (91-148)||(40481624-40481680)
chr4 (95-156)||(40613441-40613502)
chr4 (102-150)||(8423731-8423779)
chr4 (91-131)||(12628617-12628657)
chr4 (170-214)||(12884347-12884391)
chr4 (166-214)||(24343584-24343632)
chr4 (162-214)||(28964188-28964240)
chr4 (162-214)||(47264064-47264116)
[»] scaffold0306 (1 HSPs)
scaffold0306 (91-148)||(13387-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (91-148)||(21883-21940)
[»] scaffold0003 (2 HSPs)
scaffold0003 (166-219)||(236909-236962)
scaffold0003 (166-214)||(241676-241724)
[»] scaffold0019 (1 HSPs)
scaffold0019 (166-218)||(71807-71859)
[»] scaffold0652 (1 HSPs)
scaffold0652 (166-213)||(403-450)
[»] scaffold0793 (1 HSPs)
scaffold0793 (162-214)||(4821-4873)
[»] scaffold0450 (1 HSPs)
scaffold0450 (91-138)||(8660-8707)
[»] scaffold0128 (1 HSPs)
scaffold0128 (166-213)||(32775-32822)
[»] scaffold0018 (1 HSPs)
scaffold0018 (91-160)||(178821-178891)
[»] scaffold0223 (1 HSPs)
scaffold0223 (95-160)||(20163-20228)
[»] scaffold0103 (1 HSPs)
scaffold0103 (91-148)||(51798-51855)
[»] scaffold0036 (1 HSPs)
scaffold0036 (91-156)||(9754-9819)
[»] scaffold0020 (1 HSPs)
scaffold0020 (102-214)||(135263-135373)
[»] scaffold0008 (1 HSPs)
scaffold0008 (91-160)||(263375-263444)
[»] scaffold0361 (1 HSPs)
scaffold0361 (96-148)||(14522-14574)
[»] scaffold0004 (2 HSPs)
scaffold0004 (91-159)||(92794-92862)
scaffold0004 (162-213)||(92889-92940)
[»] scaffold0053 (1 HSPs)
scaffold0053 (91-137)||(8785-8831)
[»] scaffold0246 (1 HSPs)
scaffold0246 (91-148)||(19563-19619)
[»] scaffold0168 (1 HSPs)
scaffold0168 (186-219)||(21379-21412)
[»] scaffold0136 (1 HSPs)
scaffold0136 (162-215)||(3777-3830)
[»] scaffold0007 (1 HSPs)
scaffold0007 (91-156)||(225275-225340)
[»] scaffold0512 (1 HSPs)
scaffold0512 (186-214)||(4976-5004)
[»] scaffold0475 (1 HSPs)
scaffold0475 (171-215)||(3384-3428)
[»] scaffold0191 (1 HSPs)
scaffold0191 (165-217)||(31340-31392)
[»] scaffold0085 (1 HSPs)
scaffold0085 (103-139)||(26392-26428)


Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 38464519 - 38464291
Alignment:
Q  8 cattgcatgtttatctttgtttgaagatgccccatttgtttattgttgtctcctatgatgcaccgatactaacacggaacactacactgacatgccgaca 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  38464519 cattgcatgtttatctttgtttgaagatgccccatttgtttattgttgtctcctatgatgcacccatactaacacggaacactacaccgacatgccgaca 38464420  T
Q  108 caactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38464419 caactaataatttgagaaaatcacattattcattgaaattataagtgtcagtggcacatgtccgacaccgggacacacctaatccgaggagtgtctgtgc 38464320  T
Q  208 ttcataggttgtctcctttgttgcctttg 236  Q
    |||||||||||||||||||||||||||||    
T  38464319 ttcataggttgtctcctttgttgcctttg 38464291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 21191128 - 21190998
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg---------gcacatgtccgacaccgggac 181  Q
    ||||||||||||||||||| |||||||||||| |||||||||| ||||| || ||||| | ||||| |||          ||| |||||||| |||||||    
T  21191128 acactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggac 21191029  T
Q  182 acatctaatccgaggagtgtctgtgcttcat 212  Q
    ||  ||||||||||||||||| |||||||||    
T  21191028 acgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 214
Target Start/End: Original strand, 2436877 - 2437030
Alignment:
Q  59 cctatgatgcaccgatactaacacggaacactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcag 158  Q
    ||||||| |||| |||||  |||| | |||| ||||||||| ||||||||  |||||||||||  |||||||||| |||| |||  |||||| ||||| |    
T  2436877 cctatgaagcacggatacggacaccggacacgacactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcgg 2436976  T
Q  159 tggcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||   | |||||||||||  |||||  ||||||||||||||||  |||||||||||    
T  2436977 tg--tcgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatag 2437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 217
Target Start/End: Original strand, 6247609 - 6247732
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg--gcacatgtccgacaccgggacacatcta 188  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| ||||| || ||||| | ||||| |||  | |||    || || ||||||||| |||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca----cggca-cgggacacaccta 6247703  T
Q  189 atccgaggagtgtctgtgcttcataggtt 217  Q
    ||||||| |||||||||||||||||||||    
T  6247704 atccgagaagtgtctgtgcttcataggtt 6247732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 3966490 - 3966555
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||||||||||||  ||||||||||||||||||||||  ||||| || ||||||| |||||    
T  3966490 acactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtc 3966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 7677783 - 7677835
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||||||  ||||||||||||| ||| |||||||||||    
T  7677783 cacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 30183536 - 30183583
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    ||||||| |||||||||||||||||||||||| || ||||||||||||    
T  30183536 acactgatatgccgacacaactaataatttgaaaatatcacattattc 30183583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 31084305 - 31084367
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||| ||||||||| ||||||||| |||||||||||| |||||||||| ||||| || |||||    
T  31084305 acacgacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaatta 31084367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 14873593 - 14873642
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||| ||||||||||||  ||||||||||||||||| ||||||||||||    
T  14873593 tgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 16203867 - 16203746
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg--gcacatgtccgacaccgggacacatcta 188  Q
    ||||| ||||||||||||  ||||||||||||||||||| ||| ||| | || ||||||| ||||| |||  | ||| | |  ||||||| ||||   ||    
T  16203867 acactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcggacaagac--acaccggtacacgctta 16203770  T
Q  189 atccgaggagtgtctgtgcttcat 212  Q
    ||||||||||||||||||||||||    
T  16203769 atccgaggagtgtctgtgcttcat 16203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 39698528 - 39698597
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||| || |||||| |||||||||||| |||||||||| ||||| || ||||| | |||||||||    
T  39698528 acactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtg 39698597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 41995458 - 41995515
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||||||||||||||||||| || |||||||||| ||||| || |||||    
T  41995458 acactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 2419938 - 2419986
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||| |||||||||| ||||||||| ||||||| |||||||||||    
T  2419938 tgtccgaccccgggacacacctaatccgatgagtgtccgtgcttcatag 2419986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 12264907 - 12264835
Alignment:
Q  85 aacactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtca 157  Q
    ||||| ||||||||||||| ||||  ||||| |||||||||||| |||| ||||| || ||||||| ||||||    
T  12264907 aacacgacactgacatgccaacaccgctaattatttgagaaaattacatgattcagtgtaattatatgtgtca 12264835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 15382552 - 15382592
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtc 202  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  15382552 cacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||  |||||| |||||||||| |||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 2548464 - 2548499
Alignment:
Q  179 gacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||| |||||||||||||||||||||||||||||    
T  2548464 gacacacctaatccgaggagtgtctgtgcttcatag 2548499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 14674333 - 14674368
Alignment:
Q  179 gacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||| |||||||||||||||||||||||||||||    
T  14674333 gacacacctaatccgaggagtgtctgtgcttcatag 14674368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 17123116 - 17123166
Alignment:
Q  163 acatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  17123116 acatgtccgacac-gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 26716135 - 26716178
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||    
T  26716135 tgacatgccgacactgctaataatttgagaaaatcacataattc 26716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 26985875 - 26985918
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||    
T  26985875 tgacatgccgacactgctaataatttgagaaaatcacataattc 26985918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 11685921 - 11685991
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| ||||||||||||||||||  |||||||||||||||| || ||| ||| | || ||||||| |||||    
T  11685921 acacgacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtc 11685991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 14674256 - 14674298
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||    
T  14674256 acactgacacgccgacacagctaataatttgaaaaaatcacat 14674298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 19579688 - 19579730
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    ||||||| | ||||||||| |||||||||||||||||||||||    
T  19579688 acactgatacgccgacacagctaataatttgagaaaatcacat 19579730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 19737467 - 19737421
Alignment:
Q  168 tccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||  ||||||||||||| ||||||||| ||||||||||||    
T  19737467 tccgacaccaagacacatctaatctgaggagtgtttgtgcttcatag 19737421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 35017108 - 35017162
Alignment:
Q  160 ggcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| ||||| ||| ||||||||  ||||||||||||||||| |||||||||||    
T  35017108 ggcacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 39698625 - 39698671
Alignment:
Q  168 tccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||  ||||||||||||||||| |||||||||||    
T  39698625 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 43564952 - 43565002
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||| |||||||||  |||||||||| |||||| |||||||||||||    
T  43564952 tgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcataggt 43565002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 5873585 - 5873548
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaat 128  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  5873585 acactgacatgccgacacctctaataatttgagaaaat 5873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 16304411 - 16304366
Alignment:
Q  169 ccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||| ||||| ||||||||||||| |||| |||||||||||    
T  16304411 ccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 18421812 - 18421779
Alignment:
Q  179 gacacatctaatccgaggagtgtctgtgcttcat 212  Q
    ||||| ||||||||||||||||||||||||||||    
T  18421812 gacacgtctaatccgaggagtgtctgtgcttcat 18421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 27144450 - 27144515
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| ||||||||  ||||||||||||| ||||||||| ||| | || ||||||| |||||    
T  27144450 acactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 28588742 - 28588681
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||| ||||||||   |||||||||||||||||||||| ||||| || ||||||| |||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtc 28588681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 39268586 - 39268541
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttca 211  Q
    |||||||||| |||||||  ||||||||||||||||| ||||||||    
T  39268586 tgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 39342511 - 39342564
Alignment:
Q  164 catgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    |||||| |||||||||||||  ||||||| |||||||||| | |||||||||||    
T  39342511 catgtcagacaccgggacacgcctaatccaaggagtgtctctacttcataggtt 39342564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 3966596 - 3966632
Alignment:
Q  177 gggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  3966596 gggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 6471941 - 6471897
Alignment:
Q  111 ctaataatttgagaaaatcacattattcattgaaattatacgtgt 155  Q
    ||||||||||||||||||||||| ||||| || ||||||| ||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 6770530 - 6770578
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    |||||||||  | ||||||||||||||||| |||||||||||| |||||    
T  6770530 acactgacacactgacacaactaataatttaagaaaatcacataattca 6770578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 9449456 - 9449504
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    |||||| || |||||||| | |||||||||||||||||||||| |||||    
T  9449456 acactggcacgccgacaccaataataatttgagaaaatcacataattca 9449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 15086552 - 15086600
Alignment:
Q  169 ccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    |||||| ||| ||||  |||||||||||||||||| |||||||||||||    
T  15086552 ccgacatcggaacacgcctaatccgaggagtgtctttgcttcataggtt 15086600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 17088362 - 17088398
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtc 202  Q
    ||||||||||||||||||  |||||||||||||||||    
T  17088362 tgtccgacaccgggacacgcctaatccgaggagtgtc 17088398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 19429498 - 19429546
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||| ||||||||| ||| |||||||| || ||||||||||||||||||    
T  19429498 tgtctgacaccgggtcacgtctaatccaagaagtgtctgtgcttcatag 19429546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 19552524 - 19552476
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||  ||||||| ||||||||||||||||| ||| |||||||    
T  19552524 tgtccgacacttggacacacctaatccgaggagtgtccgtgtttcatag 19552476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 21194115 - 21194063
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||| ||||||||| |||  ||||||||||||||||| |||||| ||||    
T  21194115 cacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 21576733 - 21576685
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||| ||||| |||||||  ||||||||||||||||| |||||||||||    
T  21576733 tgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 30098408 - 30098456
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||| |||||| ||||||| |||||||||||| |||| |||||||||||    
T  30098408 tgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 32766920 - 32766872
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||| ||| || ||||||| |||||||||| |||||||||||    
T  32766920 tgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 33178014 - 33178054
Alignment:
Q  93 actgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    ||||||| |||||||||||||||||||| | ||||||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacat 33178054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 36640260 - 36640308
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||| ||||||| ||||||||| | ||| |||||||||||||    
T  36640260 tgtccgacacccggacacacctaatccgaagggtggctgtgcttcatag 36640308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 86 - 223
Target Start/End: Complemental strand, 22881693 - 22881558
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggc--acatgtccgacaccgggacac 183  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||| ||| | || ||||| | ||||| ||| |  |||    ||||||||||||||    
T  22881693 acacgacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggaca----cgacaccgggacac 22881598  T
Q  184 atctaatccgaggagtgtctgtgcttcataggttgtctcc 223  Q
     |||||||||||||||||| |||||||||||||| |||||    
T  22881597 gtctaatccgaggagtgtccgtgcttcataggttctctcc 22881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 7918264 - 7918153
Alignment:
Q  110 actaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggc------acatgtccgacaccgggacacatctaatccgaggagtgtct 203  Q
    |||||||||||||||||||||||| ||||| || ||||||| ||||||||| |      || | || |||||| ||||||| |||||||||||||||||     
T  7918264 actaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcaacgtttctgacaccaggacacacctaatccgaggagtgtcc 7918165  T
Q  204 gtgcttcatagg 215  Q
    ||||||||||||    
T  7918164 gtgcttcatagg 7918153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 9828126 - 9828176
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  9828126 tgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcataggt 9828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 1486692 - 1486646
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||    
T  1486692 tgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 9709807 - 9709872
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||||||| ||||  ||||||||||||||||||||||| |||| ||| ||||||| |||||    
T  9709807 acactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtc 9709872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 17831603 - 17831538
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||| || ||| ||| |||||    
T  17831603 acactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtc 17831538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 36878448 - 36878513
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| ||||||||  ||||||||||||||||||||||| ||||| || ||||||| |||||    
T  36878448 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtc 36878513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 37598819 - 37598951
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagt---------ggcacatgtccgacaccgggac 181  Q
    ||||||||| |||||||||||||||||||||| |||||||||  ||||| || ||||||| ||||| ||         | ||| |||||||||  |||||    
T  37598819 acactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggac 37598917  T
Q  182 acatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||  ||||||||||||||||| ||||||||||||    
T  37598918 acgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 18190096 - 18190048
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||| |||||||||||||||| || |||||||||    
T  18190096 tgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 24577289 - 24577201
Alignment:
Q  60 ctatgatgcaccgatactaacacggaacactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||||| |||| |||||  |||| |||||| |||| |||| || ||||||||||||||||||| |||||||||| ||||| || |||||    
T  24577289 ctatgaagcacggatacggacactgaacacgacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaatta 24577201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 34298425 - 34298485
Alignment:
Q  93 actgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgt 153  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||| || ||||||||||    
T  34298425 actgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattatacgt 34298485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 10572661 - 10572614
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattc 10572614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 25361883 - 25361942
Alignment:
Q  101 gccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    |||||||| ||| |||||||||||||||||||| ||||| || ||||||| |||||||||    
T  25361883 gccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtg 25361942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 42325630 - 42325681
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    |||| |||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  42325630 tgtcggacatcgggacacacctaattcgaggagtgtctgtgcttcataggtt 42325681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 3490467 - 3490352
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacat 185  Q
    |||| ||||||||| ||||||||  |||||||||||||||||  |||||||||| || ||||| | ||||        | |||||||||  |||||||||    
T  3490467 acacgacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagtgt--------cgtgtccgacattgggacacat 3490376  T
Q  186 ctaatccgaggagtgtctgtgctt 209  Q
    |||||||||| |||||| ||||||    
T  3490375 ctaatccgagaagtgtccgtgctt 3490352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 5898254 - 5898204
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||| |||||||||||| |||||||||||||||||| |||||| ||||||    
T  5898254 tgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttataggt 5898204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 40917831 - 40917881
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||||||||||||||  |||||||||||| |||| |||||||||||||    
T  40917831 tgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcataggt 40917881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 42359437 - 42359391
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||    
T  42359437 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 113289 - 113412
Alignment:
Q  94 ctgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggc---acatgtccgacaccgggacacatctaat 190  Q
    |||||| ||||||||| |||||||||||| |||||||||| ||||| || ||||| | ||||  ||| |    | ||||| ||||||||||||  |||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcgtgtccaacaccgggacacgcctaat 113388  T
Q  191 ccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |  ||||||||||    
T  113389 ccgaggagtgcccatgcttcatag 113412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 398837 - 398772
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| ||||||||  |||||||||||| |||||||||| ||||| || ||||||| |||||    
T  398837 acactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 5376481 - 5376448
Alignment:
Q  180 acacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||||||||||||||||||||||||||||||    
T  5376481 acacatctaatccgaggagtgtctgtgcttcata 5376448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 6427443 - 6427484
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaa 127  Q
    |||| |||||||||||||||||||||||||||||||| ||||    
T  6427443 acacgacactgacatgccgacacaactaataatttgaaaaaa 6427484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 609530 - 609482
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| |||||    
T  609530 acactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 1262871 - 1262919
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    |||| |||| ||||||||| ||||||||||||||||||||||| |||||    
T  1262871 acacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 2896193 - 2896145
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||| ||||||||  ||||||||||||||||||||||| |||||    
T  2896193 acactgacacgccgacaccgctaataatttgagaaaatcacataattca 2896145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 5944361 - 5944413
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||| ||  ||||||||||||||||  |||||||||||    
T  5944361 cacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 6427337 - 6427401
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgt 155  Q
    ||||||||| ||| ||||  ||||||||||||||||||||||| ||||| || ||||||| ||||    
T  6427337 acactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 15641102 - 15641054
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||||||||||||  |||||||||| |||||||||||| |||||    
T  15641102 acactgacatgccgacactgctaataatttaagaaaatcacatgattca 15641054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 19562603 - 19562556
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  19562603 tgtccgacacagggacacacctaatccgaggagtgtc-gtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 21366038 - 21365990
Alignment:
Q  168 tccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||| |||||  ||||||||||||||||| |||||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcataggt 21365990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 22515879 - 22515827
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| |||||||||| |||||  ||||||||||||||||| |||||||||||    
T  22515879 cacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 47989575 - 47989627
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||| |||| ||||||||  ||||||||||||||||| |||||||||||    
T  47989575 cacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 1486779 - 1486716
Alignment:
Q  93 actgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||| || |||||| |||||||||||| |||||||||| ||||| || ||||||| |||||    
T  1486779 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtc 1486716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 10233327 - 10233374
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||||||| ||||||| |||||| |||||||||| ||||||||||    
T  10233327 tgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 12443527 - 12443484
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattca 12443484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 22947806 - 22947853
Alignment:
Q  171 gacaccgggacacatctaatccgaggagtgtctgtgcttcataggttg 218  Q
    |||||| ||||||  ||||||||||||||||| |||||||||||||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgcttcataggttg 22947853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 35702692 - 35702629
Alignment:
Q  59 cctatgatgcaccgatactaacacggaacactacactgacatgccgacacaactaataatttga 122  Q
    ||||||| |||| |||||  |||| | |||| ||||||||||||||||||| ||||||||||||    
T  35702692 cctatgaagcacggatacggacaccggacacgacactgacatgccgacacagctaataatttga 35702629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 1864941 - 1864887
Alignment:
Q  102 ccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||  |||||||||||||||||||||| ||||| || ||||||| |||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtc 1864887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 9690261 - 9690211
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||||||||||||||  ||||||||  |||||| ||||||||||||||    
T  9690261 tgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcataggt 9690211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 14332709 - 14332655
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaattata 150  Q
    |||||||| |||| |||||||||||||||||||||||| ||| | || |||||||    
T  14332709 gacatgcccacaccactaataatttgagaaaatcacataatttagtgtaattata 14332655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 16297269 - 16297223
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    ||||||||||| ||||||  ||||||||||||||||| |||||||||    
T  16297269 tgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 22794068 - 22794018
Alignment:
Q  164 catgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||||| ||||| ||||||||||  |||||||||||    
T  22794068 catgtccgactccgggacacacctaattcgaggagtgtacgtgcttcatag 22794018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 29144368 - 29144318
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||||||||| ||||  ||||||||| ||||||| |||||||||||||    
T  29144368 tgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcataggt 29144318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 32434777 - 32434731
Alignment:
Q  102 ccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||||||||||||||| ||| |||||| |||||||| |||||    
T  32434777 ccgacacaactaataatttgaaaaagtcacataattcattgtaatta 32434731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 1815324 - 1815377
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||||||||||||||||  |||||| |||||||| | ||| ||||||||    
T  1815324 cacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatagg 1815377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 6427546 - 6427595
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||||||||||||  |||||| || ||||||| ||||||||||||    
T  6427546 tgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatagg 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 28273160 - 28273103
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||||||||||| |||||||||||| |||||| ||||||| || ||||| || |||||    
T  28273160 acactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaatta 28273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 38078733 - 38078676
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| | ||||||| |||||||||||| |||||||||| ||||| || |||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 46940796 - 46940747
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||||||| ||||  ||||||||||||||||  ||||||||||||    
T  46940796 tgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 9828036 - 9828096
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| |||||||| ||||||||||||| |||||||||| ||||| || |||| || |||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtc 9828096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 13011288 - 13011252
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaa 127  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  13011288 acactgacatgccgacacagctaataatttgaaaaaa 13011252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 15323239 - 15323287
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||  ||||| ||||||||||||||||| ||| |||||||    
T  15323239 tgtccgacaccgaaacacacctaatccgaggagtgtcagtgtttcatag 15323287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 19562693 - 19562629
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgt 155  Q
    ||||||||| ||||||||  ||||||||||||||||||| |||  |||| || ||||||| ||||    
T  19562693 acactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgt 19562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 25361963 - 25362012
Alignment:
Q  163 acatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||| ||||  ||||||||| ||||||| |||||||||||    
T  25361963 acatgtccgacaccggaacac--ctaatccgaagagtgtccgtgcttcatag 25362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 31015031 - 31015087
Alignment:
Q  92 cactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||||||  ||| ||||| ||||||||||||||||||||||| ||||| || |||||    
T  31015031 cactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 40747757 - 40747701
Alignment:
Q  164 catgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgtc 220  Q
    ||||||| |||| |||||||  ||||||||||||| ||| |||||||||||| ||||    
T  40747757 catgtcccacacagggacacccctaatccgaggagcgtccgtgcttcataggatgtc 40747701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 43113005 - 43113053
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||| |||||||||||||| |||||| || ||| |||||||||||||||    
T  43113005 tgtctgacaccgggacacacctaatctgaagagagtctgtgcttcatag 43113053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 48450586 - 48450550
Alignment:
Q  178 ggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||| |||||||||||||||||| |||||||||||    
T  48450586 ggacacgtctaatccgaggagtgtccgtgcttcatag 48450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 31959146 - 31959268
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaat 190  Q
    ||||||||| |||| |||| |||||||||||| |||||||||| || || || ||||| | ||||| | | ||  ||||||||||||||||||| |||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcggcgacatgtgtccgacaccgggacacacctaat 31959245  T
Q  191 ccgaggagtgtctgtgcttcata 213  Q
    |||||||||||| ||||||||||    
T  31959246 ccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 9027165 - 9027286
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaat 190  Q
    ||||||||| ||||||||  |||||||||||||| |||||||| ||||  || ||||||| ||||| ||| |   ||||||||||||||||||  |||||    
T  9027165 acactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg--tgtccgacaccgggacacggctaat 9027262  T
Q  191 ccgaggagtgtctgtgcttcatag 214  Q
    || |||||||| ||||||||||||    
T  9027263 ccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 9025546 - 9025448
Alignment:
Q  111 ctaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttc 210  Q
    ||||||||||||||||||||||| ||||| || ||||||| ||||| ||| |   ||||||||||||||||||  |||||||||| |||||| |||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg--tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttc 9025449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 34595125 - 34595253
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggc---------acatgtccgacaccgggacacat 185  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||| || ||||| | ||||| ||| |         || |||| ||||||||||||||     
T  34595125 tgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacac 34595224  T
Q  186 ctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||| |||||||||||    
T  34595225 ctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 8776956 - 8776904
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttg 218  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||||||||||    
T  8776956 tgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcataggttg 8776904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 34290149 - 34290091
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattat 149  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||| || ||||||    
T  34290149 acactgacatgccgacacaactaataatttgcgagaatcacataattcagtgtaattat 34290091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 7938103 - 7938219
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaat 190  Q
    ||||||||| ||||||||| |||||||||||| ||||||| || ||| | || ||||||| ||||| |       |||||||||||| |||||  || ||    
T  7938103 acactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcgg-------tgtccgacaccgagacacgcctgat 7938195  T
Q  191 ccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||| |||||||||||    
T  7938196 ccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 8389456 - 8389411
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttca 211  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  8389456 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 16833295 - 16833428
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagt---------ggcacatgtccgacaccgggac 181  Q
    ||||||||| |||||||||||||||||||||| ||||||||||  |||| || ||||| | ||||| ||         | |||  |||||||||| ||||    
T  16833295 acactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgttagacacgacacgcgtccgacaccaggac 16833394  T
Q  182 acatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||| | |||||||||||||||||| |||||||||    
T  16833395 acaccgaatccgaggagtgtctgtacttcatagg 16833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 32978891 - 32978842
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttca 211  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  32978891 cacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 34172182 - 34172288
Alignment:
Q  93 actgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagt----ggcacatgtccgacaccgggacacatcta 188  Q
    ||||||||||||||||  |||| |||||||||||||||||| ||| ||| |||||||| ||||| ||    | ||| ||||||||||| ||||||  |||    
T  34172182 actgacatgccgacacctctaacaatttgagaaaatcacataattaattaaaattatatgtgtcggtgtcggacacgtgtccgacaccaggacacgccta 34172281  T
Q  189 atccgag 195  Q
    |||||||    
T  34172282 atccgag 34172288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 7248440 - 7248488
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||    
T  7248440 tgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 7930292 - 7930348
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatt 147  Q
    |||||||||||||||||||| ||||||||||| |||||||||| ||| | |||||||    
T  7930292 acactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatt 7930348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 9107347 - 9107299
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  9107347 tgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 7996450 - 7996391
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattata 150  Q
    ||||||||||||||||||  |||||||||||||||||||| || ||||| || |||||||    
T  7996450 acactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattata 7996391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 8022351 - 8022410
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattata 150  Q
    ||||||||||||||||||  |||||||||||||||||||| || ||||| || |||||||    
T  8022351 acactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattata 8022410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 19040341 - 19040404
Alignment:
Q  93 actgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||| ||||||||  ||||||||||||||||||||||| ||||| || ||||||| |||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 10339106 - 10339052
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||||||| |||||||  |||||| |||||||||| |||||||||||||    
T  10339106 cacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataggt 10339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 7265665 - 7265600
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| ||| ||||  ||||||||||||||||||||||| ||||| || ||||||| |||||    
T  7265665 acactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7265600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 8365496 - 8365443
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgt 219  Q
    |||||||||| |||||||  |||||||||||||| || ||||||||||||||||    
T  8365496 tgtccgacactgggacacgcctaatccgaggagtctccgtgcttcataggttgt 8365443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 8777045 - 8776988
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| |||||||||||||||||||||| |||||||||  ||||| || |||||    
T  8777045 acactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 10770746 - 10770689
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||| |||||||||||||||||| |||||||||| ||||| || |||||    
T  10770746 acactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaatta 10770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 12696311 - 12696380
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||| ||||||||| |||||||||||| ||||| |||| ||||| || ||||| | |||||||||    
T  12696311 acactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtg 12696380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 13364696 - 13364643
Alignment:
Q  163 acatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||| |||||| |||||| |||| ||||| |||||||||||||||||||||    
T  13364696 acatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcataggt 13364643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 16766684 - 16766741
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| ||||| || |||||    
T  16766684 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 19044451 - 19044516
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| |||||||| |||||||||||||||| ||||||| ||||| ||  |||||| |||||    
T  19044451 acactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtc 19044516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 34073323 - 34073278
Alignment:
Q  169 ccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||    
T  34073323 ccgacaccgggacacctctaattcgaggagtgtccgtgcttcatag 34073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 7801228 - 7801180
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||| ||| |||||||||||||||||||||| |||||||||| |||||    
T  7801228 acactaacacgccgacacaactaataatttgaaaaaatcacataattca 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 24645552 - 24645600
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||  ||||| |||||||||| |||||||||||||||||||    
T  24645552 tgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 853928 - 853889
Alignment:
Q  94 ctgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  853928 ctgacacgccgacacaactaataatttgaaaaaatcacat 853889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 3209471 - 3209518
Alignment:
Q  167 gtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| ||||||  |||||||||||||||| ||||||||||||    
T  3209471 gtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 8365591 - 8365544
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    ||||||||| |||||||||||||||||||||| || ||||||| ||||    
T  8365591 acactgacacgccgacacaactaataatttgaaaatatcacataattc 8365544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 9658866 - 9658925
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattata 150  Q
    ||||||||| ||||||||  |||||||||| |||||||||||| ||||| || |||||||    
T  9658866 acactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 1681744 - 1681802
Alignment:
Q  90 tacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||||| ||| |||||||||||||||||||||| |||||||| | ||||| || |||||    
T  1681744 tacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaatta 1681802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 4878010 - 4878063
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||||||| || ||||  ||||||||||||||||| |||||||||||||    
T  4878010 cacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcataggt 4878063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 5462694 - 5462732
Alignment:
Q  112 taataatttgagaaaatcacattattcattgaaattata 150  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  5462694 taataatttgagaaaatcacataattcattgtaattata 5462732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 10294201 - 10294239
Alignment:
Q  178 ggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  10294201 ggacacagctaatctgaggagtgtctgtgcttcataggt 10294239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 12696400 - 12696446
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    |||| |||||||||||||| || |||| |||||||||||||||||||    
T  12696400 tgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 12868669 - 12868611
Alignment:
Q  161 gcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgt 219  Q
    ||||||||||||||| || ||||  |||||||||  |||||| ||||||||||||||||    
T  12868669 gcacatgtccgacacgggaacacgcctaatccgataagtgtcggtgcttcataggttgt 12868611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 17327638 - 17327588
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||| ||||| |||||||  ||||||||||||||||| |||||||||||||    
T  17327638 tgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcataggt 17327588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 17341735 - 17341669
Alignment:
Q  92 cactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcag 158  Q
    |||||||| ||||||||   ||||||||||| |||||||||| ||||| || ||||||| |||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtcag 17341669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 17841661 - 17841619
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||    
T  17841661 acactgacacgccgacacagctaataatttgaaaaaatcacat 17841619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 18367914 - 18367972
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgtc 220  Q
    |||||||| ||||| |||||||  || |||| ||||||||| |||||||||||||||||    
T  18367914 cacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataggttgtc 18367972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 9629374 - 9629435
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||| ||||||||  | ||||||||||||||||||||| ||||| || ||||||| |||||    
T  9629374 tgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtc 9629435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 24807113 - 24807162
Alignment:
Q  164 catgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    |||||||||| | ||| |||| ||||||||||||||||| ||||||||||    
T  24807113 catgtccgacgctggggcacacctaatccgaggagtgtcagtgcttcata 24807162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 26178661 - 26178620
Alignment:
Q  171 gacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    |||||||||||||  |||||| ||||||||||||||||||||    
T  26178661 gacaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 26562676 - 26562741
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| |||| ||||||||  |||| |||||||||||||||||| ||||| || ||||||| |||||    
T  26562676 acacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtc 26562741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 30866196 - 30866151
Alignment:
Q  111 ctaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||||||||||||||||| ||||| || ||||||| |||||    
T  30866196 ctaataatttgagaaaatcacataattcaatgtaattatatgtgtc 30866151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 31384923 - 31384976
Alignment:
Q  107 acaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    |||||||||||||||| |||||||||| ||||| || ||||| | |||||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtg 31384976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 8714058 - 8714110
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| ||||||| ||||||||  | |||||||||||||||| ||||||||||    
T  8714058 cacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 9617442 - 9617486
Alignment:
Q  112 taataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||||||||||||||||||||| ||||| || ||||||| |||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtc 9617486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 9629465 - 9629513
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| | ||||| ||||||||||||||||||  ||||||||||    
T  9629465 tgtccgacactgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 14796262 - 14796214
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    |||||||||||||||||||||   |||||| |||||||||||| |||||    
T  14796262 acactgacatgccgacacaaccgttaatttaagaaaatcacataattca 14796214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 16766779 - 16766827
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||  ||||||||| || |||| |||||||||||    
T  16766779 tgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 27903999 - 27903963
Alignment:
Q  177 gggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  27903999 gggacacacctaatccgaggagtgtctgtgattcata 27903963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 28152169 - 28152217
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||   ||||||||||||||||  |||||||||||    
T  28152169 tgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 32299283 - 32299327
Alignment:
Q  112 taataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||||||||||||||||||||| ||||| || | |||||||||||    
T  32299283 taataatttgagaaaatcacataattcaatgtagttatacgtgtc 32299327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 32839611 - 32839571
Alignment:
Q  174 accgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  32839611 accgggacacgcctaatccgagaagtgtctgtgcttcatag 32839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 34895016 - 34894968
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||| |||||  |||||||||| |||||||||||    
T  34895016 tgtccgacacagggacacacctaatatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 35861951 - 35862072
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaat 190  Q
    ||||| ||| |||||||||||||||||||||| |||||||||| ||||| || |||| || ||||| ||| |    ||| |||||  ||||||  |||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtc----gtcggacacgaggacacgcctaat 35862046  T
Q  191 ccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||||| |||||||||||||    
T  35862047 ccgaggagtgtccgtgcttcataggt 35862072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 21864879 - 21864927
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  21864879 tgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 22868029 - 22868097
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagt 159  Q
    ||||||||| |||||||| ||||||||| |||||||||||||| ||||| || ||||||| ||||||||    
T  22868029 acactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtcagt 22868097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 40131987 - 40131939
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  40131987 tgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 5409819 - 5409768
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  5409819 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcataggtt 5409768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 32287451 - 32287404
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  32287451 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 40287428 - 40287306
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagt----ggcacatgtccgacaccgggacacatc 186  Q
    |||| |||| ||||||||||| |||||||||| ||||||| || ||||| || ||||| | ||||| ||    | |||||||||||||||||||||   |    
T  40287428 acacggacacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagtgtcggtatcggacacatgtccgacaccgggacatgcc 40287330  T
Q  187 taatccgaggagtgtctgtgcttc 210  Q
    |||||||||||||||| |||||||    
T  40287329 taatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 32308107 - 32308176
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||| ||||||||  ||||||||||||||||||||||| ||||| || |||| || |||||||||    
T  32308107 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtg 32308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 1433530 - 1433578
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  1433530 tgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 35749915 - 35750007
Alignment:
Q  123 gaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    |||||| |||||||||| || |||| || ||||| ||| |   ||||||| ||||||||||| ||| || |||||||||||||||||||||||    
T  35749915 gaaaataacattattcagtgtaattgtaagtgtcggtgtcgtgtgtccgaaaccgggacacacctagtcggaggagtgtctgtgcttcatagg 35750007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 9778576 - 9778627
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||||||||||||    
T  9778576 tgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcataggtt 9778627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 20545236 - 20545185
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    |||||||||||||| ||||||| | |||| ||||||||||||||||||||||    
T  20545236 cacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcata 20545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 24105665 - 24105797
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc--agt--ggcaca-----tgtccgacaccgggac 181  Q
    ||||||||| ||||||||| |||||||||||| |||||  ||| ||||| || ||||| | |||||  |||  ||||||     ||||||||||||||||    
T  24105665 acactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgacaccgggac 24105764  T
Q  182 acatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||  |||| ||||||||||| ||||||||||||    
T  24105765 acgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 1401032 - 1401143
Alignment:
Q  111 ctaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggc-------acatgtccgacaccgggacacatctaatccgaggagtgtct 203  Q
    |||||||||||||||| |||||| ||||| || ||||||| || || ||| |       |||||||||||| ||||||||| |||||| ||||||||||     
T  1401032 ctaataatttgagaaactcacataattcagtgtaattataagtatcggtgtccgacacgacatgtccgacatcgggacacacctaatctgaggagtgtcc 1401131  T
Q  204 gtgcttcatagg 215  Q
     |||||||||||    
T  1401132 atgcttcatagg 1401143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 6490787 - 6490840
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgt 219  Q
    ||||||||||||||||||   |||||||||||||||| ||||||||||| ||||    
T  6490787 tgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatagtttgt 6490840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 6630984 - 6630919
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| |||||||| ||||||||||||||||| |||| | ||||| || ||||||| |||||    
T  6630984 acactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtc 6630919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 7438693 - 7438750
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||||||||||||||||||  ||||||||||| |||||||||| ||||| || |||||    
T  7438693 acactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaatta 7438750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 15680880 - 15680929
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    |||||||||||| ||||| |||||| ||||||||||| ||||||||||||    
T  15680880 tgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagg 15680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 15902809 - 15902874
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||||||||||||||||| | ||||||||||| |||||||||| ||| | || ||||||| |||||    
T  15902809 acactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtc 15902874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 27945028 - 27945085
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| ||||| || |||||    
T  27945028 acactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaatta 27945085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 598279 - 598327
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||  |||||||||| |||||| |||||||||||    
T  598279 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 17852071 - 17852119
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||| |||||| ||||| ||||||||||| |||||||||||    
T  17852071 tgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 21880219 - 21880271
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||| ||||||  |||||||||| |||||| |||||||||||    
T  21880219 cacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 23128631 - 23128599
Alignment:
Q  186 ctaatccgaggagtgtctgtgcttcataggttg 218  Q
    |||||||||||||||||||||||||||||||||    
T  23128631 ctaatccgaggagtgtctgtgcttcataggttg 23128599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 24339726 - 24339778
Alignment:
Q  168 tccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgtc 220  Q
    ||||||||||||||||  ||||||||||||||| | ||||||||||| |||||    
T  24339726 tccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatagattgtc 24339778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 43027452 - 43027404
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||  ||||||||| ||||||| |||||||||||    
T  43027452 tgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 19206047 - 19206102
Alignment:
Q  101 gccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||  ||||||||||||||||||||||| |||||||  ||||||| |||||    
T  19206047 gccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtc 19206102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 32308198 - 32308237
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgt 201  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  32308198 cacatgtccgacaccgagacacagctaatccgaggagtgt 32308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 20549777 - 20549843
Alignment:
Q  90 tacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||||  |||||||  ||||||||||||||||||||| | ||||| || ||||||| |||||    
T  20549777 tacactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtc 20549843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 3991322 - 3991359
Alignment:
Q  102 ccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  3991322 ccgacacaactaataatttgaaaaaatcacataattca 3991359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 5548671 - 5548732
Alignment:
Q  99 atgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||||  || ||||||||||||||||| || ||||| || ||||||| |||||||||    
T  5548671 atgccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtg 5548732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 5835234 - 5835299
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||| | |||||||| ||||||| ||||||||||| |||| ||||| || ||||||| |||||    
T  5835234 acactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtc 5835299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 11665508 - 11665447
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||| || ||||||||||||||||||| |||||||||| ||||| |  ||||||| |||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtc 11665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 14729769 - 14729822
Alignment:
Q  161 gcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||| ||||||||||||||||||   |||||||||||||||| || ||||||||    
T  14729769 gcacgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 18013146 - 18013077
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    |||||||||| | ||||| ||||||||||| | ||||| |||| ||||| || ||||||| |||||||||    
T  18013146 acactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtg 18013077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 21828477 - 21828408
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||| ||||||||   || ||||||||||||||||||| || ||||| |||| || |||||||||    
T  21828477 acactgacacgccgacaccgttagtaatttgagaaaatcacataatccattgtaattgtatgtgtcagtg 21828408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 24339633 - 24339686
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||| ||||||||| |||||||||||| |||||||||| ||||| || |||||    
T  24339633 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 24339686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 25481893 - 25481946
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||| ||||||||| |||||||||||| |||||||||| ||||| || |||||    
T  25481893 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 2334327 - 2334379
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||| |  |||| |||||||||||||||||| ||| |||||||    
T  2334327 cacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 4909159 - 4909207
Alignment:
Q  112 taataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||||||||||| |||| |||||||| ||| ||| |||||||||    
T  4909159 taataatttgagaaaattacataattcattgtaatcatatgtgtcagtg 4909207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 7133260 - 7133212
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||| |||||| |||||| ||| |||||||||||    
T  7133260 tgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 10043011 - 10043051
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtc 202  Q
    |||||||||||||||||||||| |||||||| |||| ||||    
T  10043011 cacatgtccgacaccgggacacgtctaatccaaggaatgtc 10043051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 11722170 - 11722122
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||| ||||||||  |||| |||||||||||||||||| |||||    
T  11722170 acactgacacgccgacaccgctaacaatttgagaaaatcacataattca 11722122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19992001 - 19992053
Alignment:
Q  104 gacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||||| |||||||||||||||||||||||  |||| || ||||||| |||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtc 19992053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 29763177 - 29763129
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||| | ||||||  ||||||||||||||||| |||||||||||    
T  29763177 tgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 29787431 - 29787383
Alignment:
Q  101 gccgacacaactaataatttgagaaaatcacattattcattgaaattat 149  Q
    ||||||||  ||||||||||||||||||||||| ||||| || ||||||    
T  29787431 gccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 35297728 - 35297680
Alignment:
Q  107 acaactaataatttgagaaaatcacattattcattgaaattatacgtgt 155  Q
    |||| |||||||||||||||||||||| |||||||  ||||||| ||||    
T  35297728 acaattaataatttgagaaaatcacataattcattataattatatgtgt 35297680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 38134379 - 38134335
Alignment:
Q  170 cgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| ||||||||  |||||||||||||||| ||||||||||||    
T  38134379 cgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 38134335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 38804537 - 38804489
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||| ||||||||   |||||||||||||||| ||||||||||||    
T  38804537 tgtccgacgccgggacatgcctaatccgaggagtgtatgtgcttcatag 38804489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 49107887 - 49107923
Alignment:
Q  177 gggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    |||||| | ||||||||||||||||||||||||||||    
T  49107887 gggacatacctaatccgaggagtgtctgtgcttcata 49107923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 18841005 - 18840953
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  18841005 cacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 35449500 - 35449627
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagt---ggcacatgtccgacaccgggacacatct 187  Q
    ||||||||| ||| ||||   |||||||||||||||||||||  ||||| || ||||||| |||||||    | ||||||||||||||| | |||| |||    
T  35449500 acactgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaattatatgtgtcagacacgacacatgtccgacaccagaacacgtct 35449599  T
Q  188 --aatccgaggagtgtctgtgcttcata 213  Q
      ||||||||||||||||||||||||||    
T  35449600 ctaatccgaggagtgtctgtgcttcata 35449627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 37419825 - 37419878
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgt 219  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  37419825 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcataggttgt 37419878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 2438711 - 2438661
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  2438711 cacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 18622612 - 18622722
Alignment:
Q  110 actaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggc-----acatgtccgacaccgggacacatctaatccgaggagtgtctg 204  Q
    ||||||||||| | |||||||||| ||||| || ||||||||||||  ||| |     | |||||| |||||||||||||  |||||||||||||||| |    
T  18622612 actaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtcatatgtcctacaccgggacacacttaatccgaggagtgtccg 18622711  T
Q  205 tgcttcatagg 215  Q
    |||||||||||    
T  18622712 tgcttcatagg 18622722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 27286273 - 27286222
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||||||||||||||||| ||||||||  | ||||||||||||||||||    
T  27286273 cacatgtccgacaccgggacatatctaatctaaagagtgtctgtgcttcata 27286222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 21782890 - 21782832
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattat 149  Q
    ||||||||| ||||||||  ||||||||||||||||||||||| ||||| || ||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 37411313 - 37411251
Alignment:
Q  94 ctgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||| ||  |||||| |||||    
T  37411313 ctgacatgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtc 37411251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 20242799 - 20242734
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| |||||||||||||||  ||| |||||||||||| ||||| || ||||||| |||||    
T  20242799 acactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtc 20242734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 21616749 - 21616813
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgt 155  Q
    |||| |||| ||||||||  ||||||||||||||||||||||| ||||| || ||||||| ||||    
T  21616749 acacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 24975303 - 24975255
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||| |||||||| |||||||||| |||||||||||    
T  24975303 tgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcatag 24975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 26769593 - 26769641
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  26769593 tgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 37558964 - 37559096
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcag---------tggcacatgtccgacaccgggac 181  Q
    ||||||||| ||||||||| |||||||||||  |||||||||| ||||| || ||||| | ||||| |         || ||| ||||||||||||| ||    
T  37558964 acactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccgacaccggtac 37559063  T
Q  182 acatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||   |||||||||||||||| |||||||||||    
T  37559064 acgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 38117147 - 38117099
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||  ||||||||||| ||||| |||||||||||    
T  38117147 tgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 38117261 - 38117189
Alignment:
Q  61 tatgatgcaccgatactaacacggaacactacactgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    ||||| |||| |||||  |||| | |||| ||||||||| ||||||||| |||||||||||| ||||||||||    
T  38117261 tatgaagcacggatacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacat 38117189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 42511370 - 42511322
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  42511370 tgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 12668493 - 12668430
Alignment:
Q  93 actgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||| ||||||| |||||||||||||| ||||| |||| ||||| || ||||||| |||||    
T  12668493 actgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtc 12668430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 18420504 - 18420441
Alignment:
Q  93 actgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||| ||| ||||  ||||||||||||||||||||||| ||||| || ||||||| |||||    
T  18420504 actgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtc 18420441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 31284034 - 31284093
Alignment:
Q  90 tacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattat 149  Q
    |||||| ||| ||||||||  ||||||||||||||||||||||| || ||||| ||||||    
T  31284034 tacacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaattat 31284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 44860402 - 44860449
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  44860402 tgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 18276508 - 18276566
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattat 149  Q
    ||||||| ||||||||||  ||||||||||||||||||||| | ||||| || ||||||    
T  18276508 acactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaattat 18276566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 19580259 - 19580225
Alignment:
Q  180 acacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||| |||||||||||||||||||    
T  19580259 acacatctaatccgaagagtgtctgtgcttcatag 19580225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 26769493 - 26769543
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattat 136  Q
    |||| |||| |||| |||||||||||||||||||||| || ||||||||||    
T  26769493 acacgacacagacacgccgacacaactaataatttgaaaatatcacattat 26769543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 36756325 - 36756275
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    ||||||||||||||||  ||||  ||||||| |||||||||||||||||||    
T  36756325 cacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 974746 - 974791
Alignment:
Q  103 cgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||||||||||||||||||| || ||||||||||||| || |||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaatta 974791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 15972944 - 15972993
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    |||||||| |||||||||| ||||||||| || |||| ||||||||||||    
T  15972944 tgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatagg 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 120
Target Start/End: Original strand, 20473309 - 20473338
Alignment:
Q  91 acactgacatgccgacacaactaataattt 120  Q
    ||||||||||||||||||||||||||||||    
T  20473309 acactgacatgccgacacaactaataattt 20473338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 22084797 - 22084756
Alignment:
Q  173 caccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||  ||||||||| |||||||||||||||||||    
T  22084797 caccgggacacgcctaatccgatgagtgtctgtgcttcatag 22084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 23718013 - 23718078
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||||||||  |||||||  |||||||||||||||| |||||| ||||| || ||||||| |||||    
T  23718013 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 23718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Original strand, 24105685 - 24105750
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||||||||  |||||||  |||||||||||||||| |||||| ||||| || ||||||| |||||    
T  24105685 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtc 24105750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 36756416 - 36756351
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| | ||||||||||||||||||||  |||| |||| ||||| || ||||||| |||||    
T  36756416 acactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtc 36756351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 11223841 - 11223793
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||| |||||||||||||  |||||| |||||||||| |||||||||||    
T  11223841 tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 21782792 - 21782744
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| |||||||||||| ||||||| | |||||||| |||||||||||    
T  21782792 tgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 25846747 - 25846787
Alignment:
Q  110 actaataatttgagaaaatcacattattcattgaaattata 150  Q
    |||||||||||||||||||||||| ||||| || |||||||    
T  25846747 actaataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 34006978 - 34006926
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttg 218  Q
    |||| |||||||| ||||| ||||| | ||||||||| |||||||||||||||    
T  34006978 tgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcataggttg 34006926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 41843517 - 41843565
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||   | ||||||||||||||||||||||||||    
T  41843517 tgtccgacacggggacacgctttatccgaggagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 29510281 - 29510230
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  29510281 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggtt 29510230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 215
Target Start/End: Original strand, 8342956 - 8343087
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg--gcaca--tgtccgacaccgggac 181  Q
    |||| |||||||||  |||||| | |||||||||||| |||||||||| ||| | || ||||| | ||||| |||  | |||  ||||||||||||||||    
T  8342956 acacgacactgaca--ccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtacatgtgtccgacaccgggac 8343053  T
Q  182 acatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||  ||||||||| ||||||||||||||||||||    
T  8343054 acgcctaatccgaagagtgtctgtgcttcatagg 8343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 22652058 - 22652106
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  22652058 tgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 40064033 - 40064081
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  40064033 tgtccgacaccgggacacatctaatccgaggagtgtccgtgctacatag 40064081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 36450826 - 36450694
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggc--aca-------tgtccgacaccgggac 181  Q
    ||||||||| |||||||||||||||||||||| |||||||||  ||||| || ||||| | ||||  ||| |  |||       ||||||||||| ||||    
T  36450826 acactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgacaccaggac 36450727  T
Q  182 acatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||  |||||||||||||||||||||||||||||    
T  36450726 acgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 16641951 - 16641909
Alignment:
Q  172 acaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  16641951 acaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 4786422 - 4786345
Alignment:
Q  79 acacggaacactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| |||||| ||||||||| |||||||| | ||||||||| |||||||||||| ||||| || ||||||| |||||    
T  4786422 acaccgaacacgacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtc 4786345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 8343398 - 8343447
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  8343398 tgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 13437036 - 13436910
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtc-----cgacaccgggacacat 185  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| |||||| | ||| | | ||||| |||   | ||||     ||||||||||||||      
T  13437036 acactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtg--tcgtgtcggtgtcgacaccgggacacgc 13436939  T
Q  186 ctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||| |||||||||||||||||||||    
T  13436938 ctaatccaaggagtgtctgtgcttcatag 13436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 15816201 - 15816136
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| |||||||||||||||||||||| |||||||||| ||| | || ||||||| |||||    
T  15816201 acactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtc 15816136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 38487205 - 38487156
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  38487205 tgtccgacacccggacacacataatccgaggagtgtctgtgcttcatagg 38487156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 11803337 - 11803389
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||| || |||| |||||||||||||||||| |||||||||||    
T  11803337 cacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 12559088 - 12559044
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttc 210  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  12559088 tgtccgacaacgggacacatctaatcccaggagtgtctgtgcttc 12559044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 3025558 - 3025607
Alignment:
Q  111 ctaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||||||||||||||||| ||||| || ||||||| |||||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtg 3025607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 4673400 - 4673351
Alignment:
Q  168 tccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  4673400 tccgacaccggaacacgcctaatccaaggagtgtctgtgcttcataggtt 4673351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 20679467 - 20679402
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||||| ||||||  |||||||||||||||||||||||  |||| || ||||||| |||||    
T  20679467 acactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtc 20679402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 30068016 - 30067967
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    |||||||||| |||||||| ||||||||| ||||||| ||||||||||||    
T  30068016 tgtccgacactgggacacacctaatccgatgagtgtccgtgcttcatagg 30067967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 22651963 - 22652011
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| |||||    
T  22651963 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 22652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 29447170 - 29447134
Alignment:
Q  103 cgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29447170 cgacacaactaataatttgagaaaatcacataattca 29447134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 29447526 - 29447574
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||  ||||||| |||||||||| |||||||||||    
T  29447526 tgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 31236644 - 31236584
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| ||||||||  ||||||||||||||||||||||| ||||| || ||||||| |||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtc 31236584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 25566910 - 25566949
Alignment:
Q  175 ccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  25566910 ccgggacacgcctaatccgaggagtgtctgtgcttcatag 25566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 44462186 - 44462151
Alignment:
Q  163 acatgtccgacaccgggacacatctaatccgaggag 198  Q
    ||||||||||||||||||||| ||||||||||||||    
T  44462186 acatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 44469719 - 44469684
Alignment:
Q  163 acatgtccgacaccgggacacatctaatccgaggag 198  Q
    ||||||||||||||||||||| ||||||||||||||    
T  44469719 acatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 13844673 - 13844603
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| |||| |||| ||||||||  ||||||||||||||||||||||| ||| | || ||||||| |||||    
T  13844673 acacgacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtc 13844603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 15816104 - 15816058
Alignment:
Q  168 tccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||  |||||||||| |||||| |||||||||||    
T  15816104 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 24362274 - 24362208
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtca 157  Q
    |||| |||| ||||||||  |||||||||||||| |||||||| ||||| || ||||||| ||||||    
T  24362274 acaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtca 24362208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 27213596 - 27213646
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||| |||||||||||||  |||||||||| |||||| |||||||||||||    
T  27213596 tgtcggacaccgggacacggctaatccgagaagtgtccgtgcttcataggt 27213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 926860 - 926795
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| ||| ||||  ||||||||||||||||||| |||| |||| || ||||||| |||||    
T  926860 acactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtc 926795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 3454577 - 3454626
Alignment:
Q  165 atgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||  |||||| ||||||||| ||||| ||||||||||||    
T  3454577 atgtccgacaccgaaacacatttaatccgagaagtgtttgtgcttcatag 3454626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 7658460 - 7658509
Alignment:
Q  101 gccgacacaactaataatttgagaaaatcacattattcattgaaattata 150  Q
    |||||||| ||||||||||||||||||| |||| ||||| || |||||||    
T  7658460 gccgacaccactaataatttgagaaaattacataattcagtgtaattata 7658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 13203700 - 13203733
Alignment:
Q  178 ggacacatctaatccgaggagtgtctgtgcttca 211  Q
    ||||||||||||||||||||||||| ||||||||    
T  13203700 ggacacatctaatccgaggagtgtccgtgcttca 13203733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 17751730 - 17751775
Alignment:
Q  169 ccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||  ||||||||||||||||| | |||||||||    
T  17751730 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 17760717 - 17760762
Alignment:
Q  169 ccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||  ||||||||||||||||| | |||||||||    
T  17760717 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 24196669 - 24196628
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcaca 132  Q
    |||| |||| |||||||||||||||||||||| |||||||||    
T  24196669 acaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 28883950 - 28883885
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||||||||||||| ||| | ||||||||||||||||| |||| ||||| || ||| ||| |||||    
T  28883950 acactgacatgccgccacgaataataatttgagaaaatgacataattcagtggaatcataggtgtc 28883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 29510376 - 29510335
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcaca 132  Q
    ||||||||| ||||||||| |||||||||||| |||||||||    
T  29510376 acactgacacgccgacacagctaataatttgaaaaaatcaca 29510335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 34897092 - 34897137
Alignment:
Q  111 ctaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||||||||||||||||| ||||| || ||||||| |||||    
T  34897092 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 34897137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 37283795 - 37283750
Alignment:
Q  174 accgggacacatctaatccgaggagtgtctgtgcttcataggttgt 219  Q
    |||||||||| |||||||||||||||| | ||||||||||| ||||    
T  37283795 accgggacacgtctaatccgaggagtgcccgtgcttcatagtttgt 37283750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 214
Target Start/End: Original strand, 11833941 - 11833969
Alignment:
Q  186 ctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||||||||||||||    
T  11833941 ctaatccgaggagtgtctgtgcttcatag 11833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 13397620 - 13397672
Alignment:
Q  164 catgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||||||| |||||  ||||| | ||||||||| |||||||||||||    
T  13397620 catgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcataggt 13397672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 14134705 - 14134745
Alignment:
Q  110 actaataatttgagaaaatcacattattcattgaaattata 150  Q
    |||||||||||||||||||||||| ||||| || |||||||    
T  14134705 actaataatttgagaaaatcacataattcagtgtaattata 14134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 16987990 - 16988030
Alignment:
Q  172 acaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    ||||||||||||  ||||||||||||||||| |||||||||    
T  16987990 acaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 22943337 - 22943301
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtc 202  Q
    ||||||||||||||||||  |||||||||||||||||    
T  22943337 tgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 24413547 - 24413499
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| ||| |||||||| ||||||||||| |||||| |||||||||||    
T  24413547 tgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcatag 24413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 27213539 - 27213599
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| ||||||||  |||||||||| |||||||||||| ||||| || ||||||| |||||    
T  27213539 gacacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtc 27213599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 41832012 - 41831964
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    |||| ||||||||||||||  ||||||||||| |||||||||| |||||    
T  41832012 acacagacatgccgacacagttaataatttgaaaaaatcacataattca 41831964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 13620834 - 13620743
Alignment:
Q  93 actgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacaca 184  Q
    ||||||||| ||||||  ||| ||||||||||||||||||| ||||| || | ||||| ||||| ||| ||| |||||||||||||||||||    
T  13620834 actgacatgtcgacaccgctagtaatttgagaaaatcacatgattcagtgcagttatatgtgtctgtgtcacgtgtccgacaccgggacaca 13620743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 214
Target Start/End: Original strand, 20503447 - 20503584
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtgg---------cacatgtccgacacc 176  Q
    |||| ||||||||| ||||||||||| |||||||||| ||||| |||| ||||| || ||||| | ||||| |||          |||||||| ||||||    
T  20503447 acacgacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacacc 20503546  T
Q  177 gggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||  ||||||||||||||||| |||||||||||    
T  20503547 gggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 40993327 - 40993273
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||||||||||||||||||  |||||||||||||||||  ||||||||||||    
T  40993327 cacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcataggt 40993273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 49651768 - 49651714
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||| ||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  49651768 cacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcataggt 49651714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 10954939 - 10954987
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||| |||||||||||||||||||||| |||||||||| |||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattca 10954987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 34185100 - 34185052
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  34185100 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 55401062 - 55401194
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggc---------acatgtccgacaccgggac 181  Q
    ||||||| | |||||||||||||||||||||| |||||||||| ||| | || ||||| | ||||| ||| |         || |||||||||||| |||    
T  55401062 acactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagac 55401161  T
Q  182 acatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||  ||||||||||||||||| |||||||||||    
T  55401162 acgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 24633757 - 24633800
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  24633757 tgacatgccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 40052383 - 40052434
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||||||||||||||||  ||||||||||||||||  ||||||||||||||    
T  40052383 tgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcataggtt 40052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 52369858 - 52369909
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  52369858 tgtccaacaccgggacacacctattccgaggagtgtccgtgcttcataggtt 52369909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 28812594 - 28812648
Alignment:
Q  163 acatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    |||||||||||| | ||||||  |||||||||||||||||||||| |||||||||    
T  28812594 acatgtccgacagcaggacacgcctaatccgaggagtgtctgtgcctcataggtt 28812648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 34910393 - 34910435
Alignment:
Q  171 gacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||||||||| |||||||||||||||||| ||||||||||    
T  34910393 gacaccgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 40052314 - 40052368
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcat 140  Q
    |||| ||||||||| ||||||||| |||||||||||| |||||||||| ||||||    
T  40052314 acacgacactgacacgccgacacagctaataatttgaaaaaatcacataattcat 40052368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 4987363 - 4987306
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| ||||| || |||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 14209105 - 14209169
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    |||| |||||||||||||||||||| | |||||||||| ||||| || ||||| | |||||||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtg 14209169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 17005596 - 17005548
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||| |||||| |||||| ||||||||||||||||| ||||||||||||    
T  17005596 tgtctgacaccaggacacctctaatccgaggagtgtttgtgcttcatag 17005548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 17276783 - 17276851
Alignment:
Q  151 cgtgtcagtggcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgt 219  Q
    |||||| ||| ||| |||||||||||| ||| || |||||||||| |||||| ||||||||||| ||||    
T  17276783 cgtgtcggtgacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatagcttgt 17276851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 21211365 - 21211413
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||  |||||||||||||||| ||||||||||||    
T  21211365 tgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 21720843 - 21720883
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtg 206  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  21720843 tgtccgacaccgggacacgtctaatccgatgagtgtctgtg 21720883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 25074866 - 25074914
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| |||||||| ||||||||||||||||  |||||||||||    
T  25074866 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 25948959 - 25948895
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgt 155  Q
    ||||||||||||||| ||  |||||||||||| |||||||||| ||||| || ||||||| ||||    
T  25948959 acactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 27505322 - 27505370
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||   ||||||||||||||||| |||||||||||    
T  27505322 tgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 34910309 - 34910361
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||| |||||||||||||||||||||| |||||||||| ||||| || |||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 5407314 - 5407196
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaatccgag 195  Q
    |||| ||||||||  |||| |||||||||||||||||| |||||||| |||||||   | ||  | ||| |||||||| || ||||||  ||||||| |     
T  5407314 gacacgccgacaccgctaaaaatttgagaaaatcacataattcattgtaattata---gacacagacacgtgtccgacgccaggacacgcctaatccaaa 5407218  T
Q  196 gagtgtctgtgcttcataggtt 217  Q
    |||||||  |||||||||||||    
T  5407217 gagtgtccatgcttcataggtt 5407196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 8039815 - 8039764
Alignment:
Q  163 acatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||||||   |||||||| |||| ||||||||||||||    
T  8039815 acatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttcatag 8039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 8789540 - 8789489
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    |||||||| ||||||| |||||  ||||||||||||||||| ||||||||||    
T  8789540 cacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 41961722 - 41961675
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    ||||||||| |||| ||||||||||||||||| || ||||||||||||    
T  41961722 acactgacacgccgtcacaactaataatttgaaaatatcacattattc 41961675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 51206340 - 51206293
Alignment:
Q  167 gtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||| || |||||||| ||||||||| |||||||||||    
T  51206340 gtccgacaccgggatacctctaatccaaggagtgtccgtgcttcatag 51206293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 2620125 - 2620083
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    ||||||||| |||||||| |||||| |||||||||||||||||    
T  2620125 acactgacacgccgacaccactaatcatttgagaaaatcacat 2620083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Complemental strand, 4987268 - 4987222
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    ||||||||||||||||||  ||||||||||||||||| || ||||||    
T  4987268 tgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 10335358 - 10335316
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||    
T  10335358 acactgacacgccgacacaactaataatttgaaaaagtcacat 10335316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 12703999 - 12704053
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaattata 150  Q
    |||| |||||||| |||||||||||||||||| ||||| ||||| || |||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgtaattata 12704053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 14979225 - 14979271
Alignment:
Q  171 gacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||||    
T  14979225 gacaccgggacacgcctaacccgaggagtgtccgtgcttcataggtt 14979271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 21479100 - 21479146
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcaca 132  Q
    |||| ||||||||| ||||||||| |||||||||||| |||||||||    
T  21479100 acacgacactgacacgccgacacagctaataatttgaaaaaatcaca 21479146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 26290358 - 26290400
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacat 133  Q
    ||||||||| |||||||| | ||||||||||||||||||||||    
T  26290358 acactgacacgccgacaccattaataatttgagaaaatcacat 26290400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 29508517 - 29508567
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    |||| ||||||||||||||||| |||||||| || |||||| |||||||||    
T  29508517 cacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 35222920 - 35222990
Alignment:
Q  86 acactacactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| |||| |||| |||||||||||||| | ||| |||||||||||| ||||| || ||||||| |||||    
T  35222920 acacgacacagacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtc 35222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 41961627 - 41961577
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||| |||||||  |||||||||| |||||| |||||||||||||    
T  41961627 tgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcataggt 41961577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 1550147 - 1550196
Alignment:
Q  111 ctaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    |||||||||||| ||||||||| |||||| || ||||||| |||||||||    
T  1550147 ctaataatttgaaaaaatcacactattcagtgtaattataggtgtcagtg 1550196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 3730149 - 3730108
Alignment:
Q  173 caccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||| |||||||||||||||||  ||||||||||    
T  3730149 caccgggacacacctaatccgaggagtgtccatgcttcatag 3730108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 6525753 - 6525712
Alignment:
Q  90 tacactgacatgccgacacaactaataatttgagaaaatcac 131  Q
    |||||||||||| ||||||  |||||||||||||||||||||    
T  6525753 tacactgacatgtcgacaccgctaataatttgagaaaatcac 6525712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 8383248 - 8383309
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||| ||||||||  |||||||||||||||||||| || ||||| || ||||||| |||||    
T  8383248 tgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtc 8383309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 8413006 - 8412969
Alignment:
Q  102 ccgacacaactaataatttgagaaaatcacattattca 139  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  8413006 ccgacacaactaataatttgagaaaaacacataattca 8412969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 10268558 - 10268489
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||| |||||||||  ||||||||||| |||||||||| ||| | || ||||| | |||||||||    
T  10268558 acactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtg 10268489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 12100340 - 12100385
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttca 211  Q
    ||||||||||||||||||| ||| ||||||||||| | ||||||||    
T  12100340 tgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 12100385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 14829677 - 14829725
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcat 140  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| ||||||    
T  14829677 acactgacacgccgacacagctaataatttga-aaaatcacataattcat 14829725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 32804608 - 32804547
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||||||||   |||||||||||||||||||||| ||| | || ||||||| |||||    
T  32804608 tgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 37077439 - 37077488
Alignment:
Q  164 catgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    |||||||||||| |||||||| ||||||| |||| |||| ||||||||||    
T  37077439 catgtccgacacggggacacacctaatccaaggaatgtccgtgcttcata 37077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 49505206 - 49505157
Alignment:
Q  111 ctaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||||||||||||||||| ||| | || ||||||| |||||||||    
T  49505206 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtg 49505157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 6525675 - 6525635
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtc 202  Q
    ||||||||||| |||| |||||| |||||||||||||||||    
T  6525675 cacatgtccgataccgagacacacctaatccgaggagtgtc 6525635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 8903514 - 8903554
Alignment:
Q  174 accgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||| ||||||||||||||||  |||||||||||    
T  8903514 accgggacacacctaatccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 9800026 - 9800074
Alignment:
Q  90 tacactgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    |||||||||| ||||||||  |||||||||||||||||| |||| ||||    
T  9800026 tacactgacacgccgacacctctaataatttgagaaaattacataattc 9800074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 10455867 - 10455915
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| ||||||| | |||||| |||||||| ||||||||||||    
T  10455867 tgtccgacactgggacacgtttaatccaaggagtgtatgtgcttcatag 10455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 214
Target Start/End: Original strand, 11252067 - 11252095
Alignment:
Q  186 ctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||||||||||||||    
T  11252067 ctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 11610580 - 11610628
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||| ||||||||  |||||| |||||||||| |||||||||||    
T  11610580 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 16000088 - 16000040
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||| |||||||||||||||||||| | ||||| |||| |||||    
T  16000088 acactgacacgccgacacaactaataatttaaaaaaataacataattca 16000040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 18427020 - 18427068
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||| |||||||||||| |||||| |||||||||| ||| |||||||    
T  18427020 tgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 21861658 - 21861694
Alignment:
Q  178 ggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  21861658 ggacacacctaatccgaggagtgtccgtgcttcatag 21861694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 26492197 - 26492141
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttg 218  Q
    |||||||| ||||||  ||||| ||||||||||||| |||| | |||||||||||||    
T  26492197 cacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcataggttg 26492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 27277827 - 27277780
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||| ||||||  ||||||||||||||||| ||||||||||||    
T  27277827 tgtccgacac-gggacatgtctaatccgaggagtgtatgtgcttcatag 27277780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 49651853 - 49651801
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||||||||||||  |||||||||||| |||||||||| ||||| || |||||    
T  49651853 gacatgccgacacggctaataatttgaaaaaatcacataattcactgtaatta 49651801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 53381576 - 53381526
Alignment:
Q  168 tccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttg 218  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  53381576 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcataggttg 53381526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 17876237 - 17876287
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcataggt 17876287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 215
Target Start/End: Complemental strand, 5775418 - 5775303
Alignment:
Q  103 cgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggca---catgtccgacaccgggacacatctaatccgaggagt 199  Q
    |||||| | |||||||||||||||||||||| ||| | || ||||||| ||||| ||| ||   | |||||  | |||||||||  ||||||||||||||    
T  5775418 cgacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcatgtcgtgtccaccgccgggacacgcctaatccgaggagt 5775319  T
Q  200 gtctgtgcttcatagg 215  Q
    ||| ||||||||||||    
T  5775318 gtccgtgcttcatagg 5775303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 715597 - 715545
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  715597 cacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 752923 - 752871
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  752923 cacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 210
Target Start/End: Original strand, 21945490 - 21945618
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcag---------tggcacatgtccgacaccgggac 181  Q
    ||||||||||||||||||| |||||||||||| ||||| |||| ||||| || ||||| | ||||| |         || ||||||||||||||||  ||    
T  21945490 acactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaac 21945589  T
Q  182 acatctaatccgaggagtgtctgtgcttc 210  Q
    ||  |||||||||||||||||| ||||||    
T  21945590 acgcctaatccgaggagtgtctatgcttc 21945618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 214
Target Start/End: Complemental strand, 23293054 - 23292926
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagt---------ggcacatgtccgacaccgggacacat 185  Q
    ||||| ||||||||| |||||||||||| |||||||||| ||||| |  ||||| | ||||| ||         | ||| ||||||||||||||||||      
T  23293054 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgc 23292955  T
Q  186 ctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||| |||||||||||    
T  23292954 ctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 36635311 - 36635375
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgt 155  Q
    ||||||||| ||| |||| |||||||||||||||||||||||| ||||| || ||||||| ||||    
T  36635311 acactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 40784029 - 40784073
Alignment:
Q  171 gacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 40784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 3947749 - 3947702
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  3947749 tgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 37203324 - 37203371
Alignment:
Q  167 gtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatag 37203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 4157216 - 4157266
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcat 212  Q
    |||||||||||||||| || ||| ||||| |||||||||||||||||||||    
T  4157216 cacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 16184902 - 16184952
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||| |||||||  |||||||||||||||| ||||||||||||||    
T  16184902 tgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcataggt 16184952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 19482750 - 19482800
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||||||||| |||||||| ||||||||||||||||  |||||||||||||    
T  19482750 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcataggt 19482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 35723457 - 35723387
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaat-cacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||| ||||||||  |||||||||||||||||| ||||| ||||| || ||||||| |||||||||    
T  35723457 acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtg 35723387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 40699936 - 40699886
Alignment:
Q  165 atgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    |||||||||||| |||||||| |||||| |||||||| |||||||||||||    
T  40699936 atgtccgacaccaggacacatgtaatcccaggagtgtttgtgcttcatagg 40699886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 944650 - 944601
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||||||||||||| |||||| ||||||| |||| ||||||||||    
T  944650 tgtccgacaccgggacacacctaatctgaggagtctctgagcttcatagg 944601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 3947838 - 3947769
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    |||| |||||||||||||| |||||||||||| |||||| ||| ||||| || ||||| | |||||||||    
T  3947838 acacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtg 3947769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 30103346 - 30103297
Alignment:
Q  165 atgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| |||| | |||||||||||||||||||||||||| ||||||||||    
T  30103346 atgtctgacatcaggacacatctaatccgaggagtgtctctgcttcatag 30103297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 20743254 - 20743210
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttc 210  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||    
T  20743254 tgtccgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 24613761 - 24613725
Alignment:
Q  103 cgacacaactaataatttgagaaaatcacattattca 139  Q
    ||||||||||||||||||||||||||||||| |||||    
T  24613761 cgacacaactaataatttgagaaaatcacataattca 24613725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 28084580 - 28084640
Alignment:
Q  151 cgtgtcagtggcacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttca 211  Q
    |||||| ||| ||| |||||||||| |||||||  ||||||||||||||||| ||||||||    
T  28084580 cgtgtcggtgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 29205535 - 29205587
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||| |||||||  ||||||||||||||||  |||||||||||    
T  29205535 cacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 30299009 - 30299049
Alignment:
Q  175 ccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  30299009 ccgggacacgtctaatccgaggagtgtccgtgcttcatagg 30299049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 30327877 - 30327917
Alignment:
Q  175 ccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  30327877 ccgggacacgtctaatccgaggagtgtccgtgcttcatagg 30327917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 54580082 - 54580030
Alignment:
Q  104 gacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||||||||||||| |||||||||| ||||| || ||||||| |||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtc 54580030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 1074837 - 1074876
Alignment:
Q  175 ccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  1074837 ccgggacacatctaatctgaggagtgtatgtgcttcatag 1074876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 3064920 - 3064865
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    |||||||||||| | | |||||  ||||||||||||||||| ||||||||||||||    
T  3064920 cacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcataggtt 3064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 18513223 - 18513172
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||||||||| ||||||  |||||| |||||||||| ||||||||||||||    
T  18513223 tgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcataggtt 18513172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 19482655 - 19482702
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    ||||||||| |||||||||||||||||||||| || ||||||| ||||    
T  19482655 acactgacacgccgacacaactaataatttgaaaatatcacataattc 19482702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 35161107 - 35161158
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||||||||||| ||||| |||||||||  |||||| ||||||||||||||    
T  35161107 tgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcataggtt 35161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 11596345 - 11596295
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||||| ||||||||  |||||| |||||||||| |||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcataggt 11596295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 11931360 - 11931410
Alignment:
Q  164 catgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||| ||||||| |||||||  |||||||| |||||||||||    
T  11931360 catgtccgacaccaggacacacctaatccatggagtgtccgtgcttcatag 11931410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 22234867 - 22234817
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    ||||||||||| ||||||| |||||||||| |||||  |||||||||||||    
T  22234867 tgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcataggt 22234817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 24613678 - 24613628
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggt 216  Q
    |||| |||||| |||||| |||||||| ||||||||| |||||||||||||    
T  24613678 tgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcataggt 24613628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 38847073 - 38847015
Alignment:
Q  102 ccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    |||||||| |||||||||||| ||||||| |||||||| || ||||| | |||||||||    
T  38847073 ccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtg 38847015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 40224484 - 40224434
Alignment:
Q  168 tccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttg 218  Q
    |||||||  ||||||| ||||||||||||||| | ||||||||||||||||    
T  40224484 tccgacattgggacacgtctaatccgaggagtatgtgtgcttcataggttg 40224434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 21873350 - 21873309
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgc 207  Q
    |||||||||||||||||| |||||||| |||||||| |||||    
T  21873350 tgtccgacaccgggacacgtctaatccaaggagtgtttgtgc 21873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 21929211 - 21929170
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgc 207  Q
    |||||||||||||||||| |||||||| |||||||| |||||    
T  21929211 tgtccgacaccgggacacgtctaatccaaggagtgtttgtgc 21929170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 34515859 - 34515811
Alignment:
Q  165 atgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||| ||||||| |||||||| ||||||||||||| |||||||    
T  34515859 atgtccgacac-gggacacgtctaatccaaggagtgtctgtgattcatag 34515811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 35158057 - 35157992
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| |||||| ||||||||||||||  |||||||||| ||| | || ||||||| |||||    
T  35158057 acactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtc 35157992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 40481624 - 40481680
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||||| |||||||||||||||| |||||||||| ||||| || |||||    
T  40481624 acactgacacgccgatacaactaataatttga-aaaatcacataattcagtgtaatta 40481680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 40613441 - 40613502
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||| ||||||||  |||||| |||||||||||||||| ||||| || ||||||| |||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtc 40613502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 8423779 - 8423731
Alignment:
Q  102 ccgacacaactaataatttgagaaaatcacattattcattgaaattata 150  Q
    |||||||  ||||||||||||||||||||||| ||||| || |||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 12628657 - 12628617
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcac 131  Q
    |||||||||||||||||||  ||||||||||| ||||||||    
T  12628657 acactgacatgccgacacagttaataatttgaaaaaatcac 12628617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 12884391 - 12884347
Alignment:
Q  170 cgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| |||| ||| |||||||||||||||||| |||||||||||    
T  12884391 cgacatcggggcacgtctaatccgaggagtgtccgtgcttcatag 12884347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 24343584 - 24343632
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||  ||| || |||||||||| |||||||||||    
T  24343584 tgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 28964240 - 28964188
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||| |||||||| |||||||  |||||||||||||||||  ||||||||||    
T  28964240 cacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 47264064 - 47264116
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||| |||||| ||||||  ||||||||| ||| |||||||||||||||    
T  47264064 cacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgcttcatag 47264116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 13387 - 13444
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||    
T  13387 acactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 21940 - 21883
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||    
T  21940 acactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 21883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 236962 - 236909
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttgt 219  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  236962 tgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcataggttgt 236909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 241676 - 241724
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    ||||||||||||||||||  |||||||||| |||||| |||||||||||    
T  241676 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 71807 - 71859
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggttg 218  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  71807 tgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcataggttg 71859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 450 - 403
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  450 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 4873 - 4821
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  4873 cacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 8707 - 8660
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattc 138  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||||    
T  8707 acactgacatgccgacacaactaataatttgaaaatatcacataattc 8660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 32775 - 32822
Alignment:
Q  166 tgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||||    
T  32775 tgtccgacaccgggacacacataatccgaggagtgtcggtgcttcata 32822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 178891 - 178821
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatca-cattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||| ||||| || ||||| | |||||||||    
T  178891 acactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtg 178821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 20163 - 20228
Alignment:
Q  95 tgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||| ||||||||| |||||||||||| |||||||||| ||||| || ||||| | |||||||||    
T  20163 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtg 20228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 51798 - 51855
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| ||||| || |||||    
T  51798 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 9819 - 9754
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    |||| ||||||||||| | |||||||||||||||||||||| | ||||| || ||||||| |||||    
T  9819 acacagacatgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtc 9754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 135373 - 135263
Alignment:
Q  102 ccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtggcacatgtccgacaccgggacacatctaatccgaggagtgt 201  Q
    |||||||  ||||||||||||||||||||||| ||||  || ||||||| ||||| |||   | ||||||||||| ||||||  |||||| |||| ||||    
T  135373 ccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtg--tcgtgtccgacaccaggacacgcctaatctgaggcgtgt 135276  T
Q  202 ctgtgcttcatag 214  Q
      |||||||||||    
T  135275 tcgtgcttcatag 135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 263444 - 263375
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagtg 160  Q
    ||||||||||| | ||||  ||||||||||||||||| ||||| ||||| || ||||||| |||||||||    
T  263444 acactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtg 263375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 14522 - 14574
Alignment:
Q  96 gacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    |||| |||||||||||||||||||||| |||||||||| ||||| || |||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 14574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 92794 - 92862
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtcagt 159  Q
    ||||||||| ||||||||  |||||||||||||||||| |||| ||||| || ||||| | ||||||||    
T  92794 acactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtcagt 92862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 92889 - 92940
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcata 213  Q
    |||||||| |||||| ||||||  ||||||||||||||||| ||||||||||    
T  92889 cacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 8785 - 8831
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattatt 137  Q
    ||||||||| ||||||||| |||||||||||| ||||||| ||||||    
T  8785 acactgacacgccgacacagctaataatttgaaaaaatcatattatt 8831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 19563 - 19619
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaatta 148  Q
    ||||||||| ||||| |||||||||||||||| |||||||||| ||||| || |||||    
T  19563 acactgacacgccgatacaactaataatttga-aaaatcacataattcagtgtaatta 19619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 21379 - 21412
Alignment:
Q  186 ctaatccgaggagtgtctgtgcttcataggttgt 219  Q
    |||||||||| |||||||||||||||||||||||    
T  21379 ctaatccgagaagtgtctgtgcttcataggttgt 21412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 3830 - 3777
Alignment:
Q  162 cacatgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||||||||||| || |||||  |||||||||||||||||  |||||||||||    
T  3830 cacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatagg 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 225340 - 225275
Alignment:
Q  91 acactgacatgccgacacaactaataatttgagaaaatcacattattcattgaaattatacgtgtc 156  Q
    ||||||||| |||||||||  ||||||||||||||||| |||| || || || ||||||| |||||    
T  225340 acactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtc 225275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 214
Target Start/End: Complemental strand, 5004 - 4976
Alignment:
Q  186 ctaatccgaggagtgtctgtgcttcatag 214  Q
    |||||||||||||||||||||||||||||    
T  5004 ctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 3384 - 3428
Alignment:
Q  171 gacaccgggacacatctaatccgaggagtgtctgtgcttcatagg 215  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcatagg 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 31392 - 31340
Alignment:
Q  165 atgtccgacaccgggacacatctaatccgaggagtgtctgtgcttcataggtt 217  Q
    ||||| |||||| |||||||| ||||| | ||||||||| |||||||||||||    
T  31392 atgtctgacaccaggacacatataatctgtggagtgtctatgcttcataggtt 31340  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 26392 - 26428
Alignment:
Q  103 cgacacaactaataatttgagaaaatcacattattca 139  Q
    |||||| |||||||||||||||||||||||| |||||    
T  26392 cgacaccactaataatttgagaaaatcacataattca 26428  T

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