View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5809-15 (Length: 129)
Name: Solexa-NF5809-15
Description: NF5809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5809-15 |
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Alignment Details
Target: chr7 (Bit Score: 110; Significance: 7e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 7e-56
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 40651362 - 40651475
Alignment:
| Q |
8 |
agagaagaaactgaatcacgaagaagaggcaaatcctcttctcaaacaacaaccacctcaacaacctccaaaagctgaacaaacaaccgagcagcaggat |
107 |
Q |
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| T |
40651362 |
agagaagaaactgaatcacgaacaagaggcaaatcctcttctcaaacaacaaccacctcaacaacctccaaaagctgaacaaacaaccgagcagcaggat |
40651461 |
T |
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| Q |
108 |
cgttatcttggatg |
121 |
Q |
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| T |
40651462 |
cgttatcttggatg |
40651475 |
T |
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