View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5811-28 (Length: 138)
Name: Solexa-NF5811-28
Description: NF5811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5811-28 |
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Alignment Details
Target: chr8 (Bit Score: 115; Significance: 8e-59; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 115; E-Value: 8e-59
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 4936800 - 4936686
Alignment:
| Q |
1 |
gaaggagtggagaacttctacagaaaaaaccacatttaccaatcctttgattttgtaagcatctaccacaaatctttcatttatttttccttctgaaaaa |
100 |
Q |
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| T |
4936800 |
gaaggagtggagaacttctacagaaaaaaccacatttaccaatcctttgattttgtaagcatctaccacaaatctttcatttatttttccttctgaaaaa |
4936701 |
T |
|
| Q |
101 |
atgtacatacaacac |
115 |
Q |
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||||||||||||||| |
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| T |
4936700 |
atgtacatacaacac |
4936686 |
T |
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