View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: Solexa-NF5811-49 (Length: 127)
Name: Solexa-NF5811-49
Description: NF5811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5811-49 |
 | |
|
| [»] chr4 (12 HSPs) |
| |
|
| [»] chr6 (25 HSPs) |
| |
|
| [»] chr2 (1 HSPs) |
| |
|
| [»] scaffold0294 (1 HSPs) |
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| [»] chr5 (1 HSPs) |
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| [»] scaffold0813 (1 HSPs) |
| | |
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| [»] scaffold0286 (1 HSPs) |
| | |
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| [»] chr8 (2 HSPs) |
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| [»] scaffold0552 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 105; Significance: 7e-53; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 7e-53
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 4344734 - 4344614
Alignment:
| Q |
7 |
acttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaa |
106 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
4344734 |
acttttgttatagcagtgttatttgcaatcagagtggttaaagattccatttgttccaagtcctcttccaacttgtcaatcattaaacatccagatagaa |
4344635 |
T |
|
| Q |
107 |
tgagagttttcagagatttca |
127 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4344634 |
tgagagttttcagagatttca |
4344614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 4361165 - 4361045
Alignment:
| Q |
7 |
acttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaa |
106 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||||| |
|
|
| T |
4361165 |
acttttgttataccagtgttatttgcaatcagagtggttaaagattccatttgttccaagtcctcttccaacgtgtcaatcattgaacatccagatagaa |
4361066 |
T |
|
| Q |
107 |
tgagagttttcagagatttca |
127 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4361065 |
tgagagttttcagagatttca |
4361045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 4123931 - 4124052
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
4123931 |
cacttttgttatagcagtattatttgcaatcagagtggttaaagattccatttgttccaactcctcttccaacttgtcaatcattaaacatcccgataga |
4124030 |
T |
|
| Q |
106 |
atgagagttttcagagatttca |
127 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4124031 |
atgagagttttcagagatttca |
4124052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 4335434 - 4335313
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||||||||||||||||||| || ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
4335434 |
cacttttgttataccagtgttatctgccatgagagtggttaaagattccatttgttccaagtcctcttccaacttgtcaatctttaaacatcctgataga |
4335335 |
T |
|
| Q |
106 |
atgagagttttcagagatttca |
127 |
Q |
| |
|
||||||||||||||||| |||| |
|
|
| T |
4335334 |
atgagagttttcagagacttca |
4335313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 4320612 - 4320732
Alignment:
| Q |
7 |
acttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaa |
106 |
Q |
| |
|
||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| |
|
|
| T |
4320612 |
acttttgttataccagtattatttgcaatcagggtggttaaagattccatttgttccaagtcctcttccaacttgtcaatcattaaacatcccgatagaa |
4320711 |
T |
|
| Q |
107 |
tgagagttttcagagatttca |
127 |
Q |
| |
|
||||||| ||||||| ||||| |
|
|
| T |
4320712 |
tgagagtattcagagttttca |
4320732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 4133417 - 4133536
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||||||||||| |||||| || ||||||||||||||||||| ||||||||||||||||| |||| || |||||||| ||||||| ||||| ||| |
|
|
| T |
4133417 |
cacttttgttattgcagtgttatccacaatcagagtggttaaagactccatttgttccaagtc--cttccaatttgtcaataattaaacagccagaaaga |
4133514 |
T |
|
| Q |
106 |
atgagagttttcagagatttca |
127 |
Q |
| |
|
|| ||||||||||||||||||| |
|
|
| T |
4133515 |
ataagagttttcagagatttca |
4133536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 7885383 - 7885496
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| |||| ||| ||||||||| |||| || ||||||||||||| ||||||||| | |||||||||||||||||||| ||| ||||||||| ||| |
|
|
| T |
7885383 |
cactcttgtgatagcagtgtcatccgcaaccaaggtggttaaagatttcatttgttctatatcctcttctaacttgtcaatttttgtacatccagacaga |
7885482 |
T |
|
| Q |
106 |
atgagagttttcag |
119 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
7885483 |
atgagtgttttcag |
7885496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 6651113 - 6651037
Alignment:
| Q |
49 |
gattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagattt |
125 |
Q |
| |
|
|||||||| |||||||||||||| || || ||||||||||| |||||||||| ||||| | ||||| |||||||| |
|
|
| T |
6651113 |
gattccatctgttccaagtcctcctccaatttgtcaatcttggaacatccagaaagaatcaaagtttctagagattt |
6651037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 6498519 - 6498637
Alignment:
| Q |
7 |
acttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaa |
106 |
Q |
| |
|
|||||||||||| |||| | || ||||||| || || || |||||||| ||||||| |||||| || || ||||||||||| |||||||||| |||| |
|
|
| T |
6498519 |
acttttgttatagcagtcttatccgcaatcaaggttgtcaatgattccatctgttccacgtcctcctccaatttgtcaatcttggaacatccagaaagaa |
6498618 |
T |
|
| Q |
107 |
tgagagttttcagagattt |
125 |
Q |
| |
|
| | ||||| |||||||| |
|
|
| T |
6498619 |
tcaaagtttctagagattt |
6498637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 6675749 - 6675673
Alignment:
| Q |
49 |
gattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagattt |
125 |
Q |
| |
|
|||||||| ||||||| |||||| || || ||||||||||| |||||||||| ||||| | ||||| |||||||| |
|
|
| T |
6675749 |
gattccatctgttccacgtcctcctccaatttgtcaatcttggaacatccagaaagaatcaaagtttctagagattt |
6675673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 6753006 - 6752930
Alignment:
| Q |
49 |
gattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagattt |
125 |
Q |
| |
|
|||||||| |||||||||||||| || || ||||||||| | |||||||||| ||||| | ||||| |||||||| |
|
|
| T |
6753006 |
gattccatctgttccaagtcctcctccaatttgtcaatcatggaacatccagaaagaatcaaagtttctagagattt |
6752930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 6815519 - 6815440
Alignment:
| Q |
46 |
aaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagattt |
125 |
Q |
| |
|
||||||||||| |||||||||||||| || || || |||||| | |||||||||| ||||| | ||||| |||||||| |
|
|
| T |
6815519 |
aaagattccatctgttccaagtcctcctccaatttttcaatcatggaacatccagaaagaatcaaagtttctagagattt |
6815440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 81; Significance: 1e-38; HSPs: 25)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 5690156 - 5690272
Alignment:
| Q |
11 |
ttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgag |
110 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| || |||| || || |||||||| |
|
|
| T |
5690156 |
ttgttattccagtgtcatttgcaagcagagtggttaaagattccatttgttccaagtcctcttccaacttgttaatcattgaacacccggaaagaatgag |
5690255 |
T |
|
| Q |
111 |
agttttcagagatttca |
127 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
5690256 |
agttttcagagatttca |
5690272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 5447655 - 5447555
Alignment:
| Q |
27 |
atttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttc |
126 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
5447655 |
atttgcaagcagagtggttaaagattccatctgttccaagtcctcttccagcttgtcaatctttaaacaaccagaaagaatgagagttttcaaagatttc |
5447556 |
T |
|
| Q |
127 |
a |
127 |
Q |
| |
|
| |
|
|
| T |
5447555 |
a |
5447555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 5425975 - 5425878
Alignment:
| Q |
30 |
tgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttca |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||| ||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
5425975 |
tgcaatcagagtggttaaagattccatttgttctatgtcctcttccaacttgtcaatcattacacacccagaaagaatgagagttttcagagatttca |
5425878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 5344949 - 5344829
Alignment:
| Q |
7 |
acttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaa |
106 |
Q |
| |
|
||||||||||| |||||| |||||| |||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| || || |||| |
|
|
| T |
5344949 |
acttttgttattgcagtgttatttgcgatcagaatggttaaagatttcatttgttctaagtcctcttccaacttgtcaatctttaaacaacccgaaagaa |
5344850 |
T |
|
| Q |
107 |
tgagagttttcagagatttca |
127 |
Q |
| |
|
|||||||||| ||||| |||| |
|
|
| T |
5344849 |
tgagagtttttagagaattca |
5344829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 5128423 - 5128530
Alignment:
| Q |
20 |
cagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcag |
119 |
Q |
| |
|
|||||| |||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||| ||| ||| ||||| |||||||||||||||| |
|
|
| T |
5128423 |
cagtgttatttgcaagcagagttgttaatgattccatttgttccaagtcctcttccaacttgtcaatcattatacaaccagaaagaatgagagttttcaa |
5128522 |
T |
|
| Q |
120 |
agatttca |
127 |
Q |
| |
|
|||||||| |
|
|
| T |
5128523 |
agatttca |
5128530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 5066710 - 5066807
Alignment:
| Q |
30 |
tgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttca |
127 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
5066710 |
tgcaagcagagtggttaaagattccatttgttctatgtcctcttctaacttgtcaatcattatacacccagaaagaatgagagttttaagagatttca |
5066807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 5176828 - 5176707
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| | |||| ||||| ||| |
|
|
| T |
5176828 |
cactcttgttattgcagtgttatttgcaagcagagtagttaaagattccatttgttccaagtcctcttccaacttgtcaatcatcgaacacccagaaaga |
5176729 |
T |
|
| Q |
106 |
atgagagttttcagagatttca |
127 |
Q |
| |
|
||||| ||||||| |||||||| |
|
|
| T |
5176728 |
atgagtgttttcaaagatttca |
5176707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 5278655 - 5278534
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| | |||| ||||| ||| |
|
|
| T |
5278655 |
cactcttgttattgcagtgttatttgcaagcagagtagttaaagattccatttgttccaagtcctcttccaacttgtcaatcatcgaacacccagaaaga |
5278556 |
T |
|
| Q |
106 |
atgagagttttcagagatttca |
127 |
Q |
| |
|
||||| ||||||| |||||||| |
|
|
| T |
5278555 |
atgagtgttttcaaagatttca |
5278534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 5354611 - 5354727
Alignment:
| Q |
11 |
ttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgag |
110 |
Q |
| |
|
||||||| ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||| | |||| ||| ||||| |||||||| |
|
|
| T |
5354611 |
ttgttattgcagtgtcatttgcaagcagggtggttaaagattccaattgttccaagtcctcttccaacttgtctaactttttacaaccagaaagaatgag |
5354710 |
T |
|
| Q |
111 |
agttttcagagatttca |
127 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
5354711 |
agttttcaaagatttca |
5354727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 5434110 - 5434003
Alignment:
| Q |
20 |
cagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcag |
119 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||| |||| || ||||||||||||| |
|
|
| T |
5434110 |
cagtgttatttgcaagcagagtggttaaagattccatatgttccaagtcatcttccaaattgtcaatctttaaacagccagtaaggatgagagttttcaa |
5434011 |
T |
|
| Q |
120 |
agatttca |
127 |
Q |
| |
|
|||||||| |
|
|
| T |
5434010 |
agatttca |
5434003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 5096789 - 5096676
Alignment:
| Q |
14 |
ttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagt |
113 |
Q |
| |
|
|||| ||||||| |||||||| |||| ||||||| |||||||||||||| | ||||||||| |||| ||||||| ||| ||| ||||| ||||||||||| |
|
|
| T |
5096789 |
ttattccagtgttatttgcaagcagaatggttaatgattccatttgttctatgtcctcttccaactcgtcaatcattatacacccagaaagaatgagagt |
5096690 |
T |
|
| Q |
114 |
tttcagagatttca |
127 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5096689 |
tttcagagatttca |
5096676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 5383410 - 5383294
Alignment:
| Q |
11 |
ttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgag |
110 |
Q |
| |
|
||||||| |||||| || ||||| || ||| |||||||||||||||||||| | ||||||||| |||||| |||||||||||| ||||| |||||||| |
|
|
| T |
5383410 |
ttgttattgcagtgttatctgcaagcaaagtagttaaagattccatttgttctatgtcctcttccaacttggtaatctttaaacaaccagaaagaatgag |
5383311 |
T |
|
| Q |
111 |
agttttcagagatttca |
127 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
5383310 |
agttttcagagatttca |
5383294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 5181919 - 5182026
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| ||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||||||| ||||||| ||||| ||| |
|
|
| T |
5181919 |
cactcttgttattgcagtgttatttgcaatcaatgtggttaaagatttcatttgttccaaatcctcttccaacttgtcaatcattaaacacccagaaaga |
5182018 |
T |
|
| Q |
106 |
atgagagt |
113 |
Q |
| |
|
|||||||| |
|
|
| T |
5182019 |
atgagagt |
5182026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 5447231 - 5447125
Alignment:
| Q |
21 |
agtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcaga |
120 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||| || ||||||||||| | |||||||||||||||||| ||||| |||| ||||||||||| | |
|
|
| T |
5447231 |
agtgttatttgcaagaagagtggttaaagattccattttctcgaagtcctcttccaccttgtcaatctttaaacaaccagaaagaacgagagttttcaaa |
5447132 |
T |
|
| Q |
121 |
gatttca |
127 |
Q |
| |
|
||||||| |
|
|
| T |
5447131 |
gatttca |
5447125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 5257326 - 5257447
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||||| |||||||||||| || |||| ||||| ||| |
|
|
| T |
5257326 |
cactcttgttattgcagtgttatttgcaattagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattgaacacccagaaaga |
5257425 |
T |
|
| Q |
106 |
atgagagttttcagagatttca |
127 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
5257426 |
atgaaagtttttagagatttca |
5257447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 30 - 127
Target Start/End: Complemental strand, 5350459 - 5350362
Alignment:
| Q |
30 |
tgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttca |
127 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||| ||| || || |||||||||||||| |||||||||| |
|
|
| T |
5350459 |
tgcaagcagagtggttaaagattccatttgttctatgtcctcttccaacttgtcaatcattatacaccctgaaagaatgagagttttgagagatttca |
5350362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 5281384 - 5281280
Alignment:
| Q |
11 |
ttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgag |
110 |
Q |
| |
|
||||||| |||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||| |||| || |||| ||||| ||||| || |
|
|
| T |
5281384 |
ttgttattgcagtgtcattagcaatcagggtcgttaaggattccatttgttccaagtcctcttctaacttgttaatcattgaacacccagaaagaatcag |
5281285 |
T |
|
| Q |
111 |
agttt |
115 |
Q |
| |
|
||||| |
|
|
| T |
5281284 |
agttt |
5281280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 5102637 - 5102727
Alignment:
| Q |
37 |
agagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttca |
127 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||||| ||||| |||||||| |||||| |||||||| |
|
|
| T |
5102637 |
agagtggttaatgattccatttgttccaagtcgtcttccaacttgtcaatcattaaacacccagaaagaatgagtattttcaaagatttca |
5102727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 5073916 - 5074021
Alignment:
| Q |
22 |
gtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagag |
121 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||| ||||| ||||||||||| |||||||||||| || |||| || || |||||||||||||| |||| |
|
|
| T |
5073916 |
gtgttatttgctatcagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattgaacacccggaaagaatgagagtttttagag |
5074015 |
T |
|
| Q |
122 |
atttca |
127 |
Q |
| |
|
|||||| |
|
|
| T |
5074016 |
atttca |
5074021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 5179616 - 5179521
Alignment:
| Q |
20 |
cagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttt |
115 |
Q |
| |
|
|||||||||| |||||||| || ||||| |||||||||| ||||||||||||||| ||||||| ||||||| |||| ||||| ||||| ||||||| |
|
|
| T |
5179616 |
cagtgtcattagcaatcagggtcgttaaggattccatttcttccaagtcctcttccaacttgttaatctttgaacacccagaaagaatcagagttt |
5179521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 5157634 - 5157741
Alignment:
| Q |
20 |
cagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcag |
119 |
Q |
| |
|
||||||| | ||||| ||||||||||||||||||||| ||||| | ||||||||| |||||||||||| ||| ||| || || ||||| | | ||||||| |
|
|
| T |
5157634 |
cagtgtcgtgtgcaagcagagtggttaaagattccatctgttctatgtcctcttccaacttgtcaatcattatacaccctgaaagaattaaaattttcag |
5157733 |
T |
|
| Q |
120 |
agatttca |
127 |
Q |
| |
|
|||||||| |
|
|
| T |
5157734 |
agatttca |
5157741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 5284409 - 5284502
Alignment:
| Q |
34 |
atcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttca |
127 |
Q |
| |
|
|||||||||||||||||| ||| ||||| ||||||||||| |||||||||||| || |||| ||| | ||||||| |||||| |||||||||| |
|
|
| T |
5284409 |
atcagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattgaacacccaaaaagaatgaaagtttttagagatttca |
5284502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 5370646 - 5370539
Alignment:
| Q |
20 |
cagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcag |
119 |
Q |
| |
|
|||||| |||||||| |||||||||||| |||||||| ||||| | |||||||| ||||| |||||| ||| ||| || || ||||| ||||| || || |
|
|
| T |
5370646 |
cagtgttatttgcaagcagagtggttaatgattccatctgttctatatcctcttccaacttctcaatcattacacaccctgaaagaataagagtctttag |
5370547 |
T |
|
| Q |
120 |
agatttca |
127 |
Q |
| |
|
|||||||| |
|
|
| T |
5370546 |
agatttca |
5370539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 5243910 - 5243980
Alignment:
| Q |
57 |
ttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttca |
127 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| ||| ||| || || ||||||| ||||||||||||||||| |
|
|
| T |
5243910 |
ttgttccaagtcctcttccaacttctcaatcattatacaccctgagagaatgaaagttttcagagatttca |
5243980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 5397025 - 5396930
Alignment:
| Q |
20 |
cagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttt |
115 |
Q |
| |
|
|||||| |||||||| || ||||||||||||||||| |||||||| || ||||| || ||||||||| |||||| ||||| |||| ||||||| |
|
|
| T |
5397025 |
cagtgttatttgcaaccaaggtggttaaagattccatctgttccaaatcttcttccaatttgtcaatcagtaaacacccagaaagaagaagagttt |
5396930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 66; Significance: 1e-29; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 22584206 - 22584327
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
||||||| |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | || ||| |||| ||||| ||| |
|
|
| T |
22584206 |
cactttttttattgcagtttcatttgcaagcagagtggttaaagattccatttgttccaagtcctcttccaacttataaagtttttaacagccagaaaga |
22584305 |
T |
|
| Q |
106 |
atgagagttttcagagatttca |
127 |
Q |
| |
|
||||||||||||| |||||||| |
|
|
| T |
22584306 |
atgagagttttcaaagatttca |
22584327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 64; Significance: 2e-28; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 8906 - 9013
Alignment:
| Q |
20 |
cagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcag |
119 |
Q |
| |
|
|||||| || ||||| ||||||||||||||||||||| ||||| | ||||||||| |||||||||||| ||| ||| ||||| ||||||||||||||||| |
|
|
| T |
8906 |
cagtgttatctgcaagcagagtggttaaagattccatctgttctatgtcctcttccaacttgtcaatcattatacacccagaaagaatgagagttttcag |
9005 |
T |
|
| Q |
120 |
agatttca |
127 |
Q |
| |
|
|||||||| |
|
|
| T |
9006 |
agatttca |
9013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 63; Significance: 8e-28; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 36213821 - 36213931
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||| || |||||||||||| |||||||||| ||| |
|
|
| T |
36213821 |
cactcttgttattgcagtgttatttgcaatcaaggtggttaaagattccatctgttccatgtcctcttccaatttgtcaatctttgaacatccagaaaga |
36213920 |
T |
|
| Q |
106 |
atgagagtttt |
116 |
Q |
| |
|
||||||||||| |
|
|
| T |
36213921 |
atgagagtttt |
36213931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 34724626 - 34724688
Alignment:
| Q |
54 |
catttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagtttt |
116 |
Q |
| |
|
||||||||| | ||||||||| ||||||||||| ||| ||||||||| | |||||||||||| |
|
|
| T |
34724626 |
catttgttctatgtcctcttccaacttgtcaatttttgtacatccagacacaatgagagtttt |
34724688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 18935450 - 18935369
Alignment:
| Q |
31 |
gcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagag |
112 |
Q |
| |
|
|||| ||| ||||| |||||| ||| ||||| | ||||||||| ||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
18935450 |
gcaaccagggtggtcaaagatgtcatctgttctatgtcctcttccaacttgtcaatttttgtacatccagataaaatgagag |
18935369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 60; Significance: 5e-26; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 47986844 - 47986963
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| |||||||| || ||| |||||||||| ||||| ||||| ||||||||| ||||||| |||||||||||| ||||| ||| |
|
|
| T |
47986844 |
cactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaatctttaaacagccagaaaga |
47986943 |
T |
|
| Q |
106 |
atgagagttttcagagattt |
125 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
47986944 |
atgagagtttttagagattt |
47986963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 47996131 - 47996250
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| |||||||| || ||| |||||||||| ||||| ||||| ||||||||| ||||||| |||||||||||| ||||| ||| |
|
|
| T |
47996131 |
cactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaatctttaaacagccagaaaga |
47996230 |
T |
|
| Q |
106 |
atgagagttttcagagattt |
125 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
47996231 |
atgagagtttttagagattt |
47996250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 48005418 - 48005537
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| |||||||| || ||| |||||||||| ||||| ||||| ||||||||| ||||||| |||||||||||| ||||| ||| |
|
|
| T |
48005418 |
cactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaatctttaaacagccagaaaga |
48005517 |
T |
|
| Q |
106 |
atgagagttttcagagattt |
125 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
48005518 |
atgagagtttttagagattt |
48005537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 48014703 - 48014822
Alignment:
| Q |
6 |
cacttttgttataccagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagataga |
105 |
Q |
| |
|
|||| ||||||| |||||| |||||||| || ||| |||||||||| ||||| ||||| ||||||||| ||||||| |||||||||||| ||||| ||| |
|
|
| T |
48014703 |
cactcttgttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaatctttaaacagccagaaaga |
48014802 |
T |
|
| Q |
106 |
atgagagttttcagagattt |
125 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
48014803 |
atgagagtttttagagattt |
48014822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 56; Significance: 1e-23; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 8877684 - 8877577
Alignment:
| Q |
20 |
cagtgtcatttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcag |
119 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| ||| ||||| |||||||| || |||||||||||| || |||| ||||| |||||||||| ||| || |
|
|
| T |
8877684 |
cagtgttatttgcaagcagagtggttaaagatttcatctgttctaagtcctcctccaacttgtcaatcattgaacacccagaaagaatgagagattttag |
8877585 |
T |
|
| Q |
120 |
agatttca |
127 |
Q |
| |
|
|||||||| |
|
|
| T |
8877584 |
agatttca |
8877577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 33; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 4861 - 4937
Alignment:
| Q |
49 |
gattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagattt |
125 |
Q |
| |
|
|||||||| |||||||||||||| || || ||||||||||| |||||||||| ||||| | ||||| |||||||| |
|
|
| T |
4861 |
gattccatctgttccaagtcctcctccaatttgtcaatcttggaacatccagaaagaatcaaagtttctagagattt |
4937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 33; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 6705 - 6629
Alignment:
| Q |
49 |
gattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagattt |
125 |
Q |
| |
|
|||||||| |||||||||||||| || || ||||||||||| |||||||||| ||||| | ||||| |||||||| |
|
|
| T |
6705 |
gattccatctgttccaagtcctcctccaatttgtcaatcttggaacatccagaaagaatcaaagtttctagagattt |
6629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.0000000006; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 3286648 - 3286748
Alignment:
| Q |
27 |
atttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttc |
126 |
Q |
| |
|
|||||||||||| || || || |||||||| || | | ||| ||||| ||||||||||||||| |||| ||||| || |||||||| |||| ||||||| |
|
|
| T |
3286648 |
atttgcaatcagtgttgtcaaggattccatctgcactatgtcttcttccaacttgtcaatctttgaacaaccagaaaggatgagagtgttcaaagatttc |
3286747 |
T |
|
| Q |
127 |
a |
127 |
Q |
| |
|
| |
|
|
| T |
3286748 |
a |
3286748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 3262760 - 3262859
Alignment:
| Q |
28 |
tttgcaatcagagtggttaaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagatttca |
127 |
Q |
| |
|
||||||||||| || || || |||||||| || | | ||| ||||| || |||||||||||| | || ||||| || ||||||||||||| |||||||| |
|
|
| T |
3262760 |
tttgcaatcagtgttgtcaaggattccatctgcactatgtcttcttccaatttgtcaatctttgagcaaccagaaagtatgagagttttcaaagatttca |
3262859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552 (Bit Score: 28; Significance: 0.0000006; HSPs: 1)
Name: scaffold0552
Description:
Target: scaffold0552; HSP #1
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 8317 - 8396
Alignment:
| Q |
46 |
aaagattccatttgttccaagtcctcttctaacttgtcaatctttaaacatccagatagaatgagagttttcagagattt |
125 |
Q |
| |
|
||||||||||| |||||||||||||| || || || |||||| | |||||||||| ||||| | ||||| |||||||| |
|
|
| T |
8317 |
aaagattccatctgttccaagtcctcctccaatttttcaatcatggaacatccagaaagaatcaaagtttctagagattt |
8396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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