View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5812-15 (Length: 121)
Name: Solexa-NF5812-15
Description: NF5812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5812-15 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 115; Significance: 7e-59; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 115; E-Value: 7e-59
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 2992325 - 2992443
Alignment:
| Q |
3 |
acagaaccaattgcataagtagtgtaaggatagggttcaaaagaatatcaagttatgttacaaattaggcacaagcacgaaaagaacaacaaaacgtgac |
102 |
Q |
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| T |
2992325 |
acagaaccaattgcataagtagtgtaaggatagggttcaaaagaatatcaagttatgttacaaattaggcacaagcacgaaaagaacaacaaaacgtgac |
2992424 |
T |
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| Q |
103 |
ctatcacccaaaacaagca |
121 |
Q |
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|||| |||||||||||||| |
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| T |
2992425 |
ctataacccaaaacaagca |
2992443 |
T |
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