View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5813-27 (Length: 124)
Name: Solexa-NF5813-27
Description: NF5813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5813-27 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 120; Significance: 8e-62; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 8e-62
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 5294580 - 5294703
Alignment:
| Q |
1 |
gaacaagaaccaataaaaatgatatggattacaatcagacaaaacatagatttgtggccaataattgatgaatcatgataaatgaatagcaacaatgtgc |
100 |
Q |
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| T |
5294580 |
gaacaagaaccaataaaaatgatatggattacaatcagacaaaacatagatttgtggccaataattgatgaatcatgataaatgaatagcaacaatgtgc |
5294679 |
T |
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| Q |
101 |
tagctagagctttacttcccagta |
124 |
Q |
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||||||||||||||||||| |||| |
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| T |
5294680 |
tagctagagctttacttcctagta |
5294703 |
T |
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