View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5814-10 (Length: 169)
Name: Solexa-NF5814-10
Description: NF5814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5814-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 147; Significance: 8e-78; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 147; E-Value: 8e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 35790407 - 35790242
Alignment:
| Q |
1 |
cataggctataaataaagagatagtacaagtgatttgaagtaatatttggtggaaggcaagagagaaagaaaactcagaacactgtctttgtttgtgttc |
100 |
Q |
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| T |
35790407 |
cataggctataaataaagagata---caagtggtttgaagtaatatttggtggaaggcaagagagaaagaaacctcagaacactgtctttgtttgtgttc |
35790311 |
T |
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| Q |
101 |
caaaccaacatcatcgtcataatggcttaccgattatcatcatcgtataacgaaaaacaacgttagttt |
169 |
Q |
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| T |
35790310 |
caaaccaacatcatcgtcataatggcttaccgattatcatcatcgtataacgaaaaacaacgttagttt |
35790242 |
T |
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