View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5814-45 (Length: 123)
Name: Solexa-NF5814-45
Description: NF5814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5814-45 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 95; Significance: 6e-47; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 95; E-Value: 6e-47
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 43376706 - 43376608
Alignment:
| Q |
25 |
gttattagatgcatatcagtatcatgtcgatacaaacgtgattagatcaacaatgggtgctgcatagatgtaacacaagttacacatcatgagacttgg |
123 |
Q |
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| T |
43376706 |
gttattagatgcatatcagtatcatgtcgatacaaacgtgattagatcaacaatgggtgctacatagatgtaacacaagttacacatcatgagacttgg |
43376608 |
T |
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