View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5814-9 (Length: 175)
Name: Solexa-NF5814-9
Description: NF5814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5814-9 |
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Alignment Details
Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 39675779 - 39675821
Alignment:
| Q |
122 |
acttcttcactttacttaacaaacacttttttcttcggtctct |
164 |
Q |
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| T |
39675779 |
acttcttcactttacttaacaaacacttttttcttcggtctct |
39675821 |
T |
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