View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5815-4 (Length: 182)
Name: Solexa-NF5815-4
Description: NF5815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5815-4 |
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Alignment Details
Target: chr8 (Bit Score: 129; Significance: 5e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 129; E-Value: 5e-67
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 2151833 - 2151981
Alignment:
| Q |
1 |
acataattcataatttgttttggtacgtggtaatagtatgcgatatgagacgagtttggtatatatatgagtatagagttttggtacacgttgattcata |
100 |
Q |
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| T |
2151833 |
acataattcacaatttgttttggtacgtggtaatagtatgcgatatgagaagagtttggtatatatatgagtatagagtttcggtacacgttgattcata |
2151932 |
T |
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| Q |
101 |
ttattagaatttttaagtggaagttaaaatttacaggtgatcatcacta |
149 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||| |||| |
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| T |
2151933 |
ttattagaatttttaagcggaagttaaaatttacaggtgatcataacta |
2151981 |
T |
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