View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5817-25 (Length: 127)
Name: Solexa-NF5817-25
Description: NF5817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5817-25 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 120; Significance: 8e-62; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 120; E-Value: 8e-62
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 45845215 - 45845096
Alignment:
| Q |
8 |
atgtttttattgatgacagcaaagaagttgatgaagagaagttacttaaagctgaaattaaggaagattcttcttaatcatttgctgactcagattatta |
107 |
Q |
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| T |
45845215 |
atgtttttattgatgacagcaaagaagttgatgaagagaagttacttaaagctgaaattaaggaagattcttcttaatcatttgctgactcagattatta |
45845116 |
T |
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| Q |
108 |
agataaacagtcacgggtct |
127 |
Q |
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| T |
45845115 |
agataaacagtcacgggtct |
45845096 |
T |
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