View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5817-29 (Length: 109)
Name: Solexa-NF5817-29
Description: NF5817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5817-29 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 109; Significance: 2e-55; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 2e-55
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 51551799 - 51551691
Alignment:
| Q |
1 |
caaagaatgcacaacctatgagaccgacgaagacaacggaagaaataactccaatgatgatccttttcctcatttgtgctctcttctcactttttcgtcg |
100 |
Q |
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| T |
51551799 |
caaagaatgcacaacctatgagaccgacgaagacaacggaagaaataactccaatgatgatccttttcctcatttgtgctctcttctcactttttcgtcg |
51551700 |
T |
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| Q |
101 |
ttcattgat |
109 |
Q |
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| T |
51551699 |
ttcattgat |
51551691 |
T |
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