View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5820-5 (Length: 138)
Name: Solexa-NF5820-5
Description: NF5820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5820-5 |
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Alignment Details
Target: chr8 (Bit Score: 102; Significance: 5e-51; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 102; E-Value: 5e-51
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 24835289 - 24835402
Alignment:
| Q |
22 |
aaaagtaatagtcaaaatttattggtatatagcacttgtgcatatggtacaagacctatagcaccttgcaccatagacttagccaacccaacttgcctgc |
121 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
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| T |
24835289 |
aaaagtaatagtcaaaatttattggtatatagcacttgtgcatatggtacaagacctatagcaccttgcaccatagacttagccaaccaaaattgcctgt |
24835388 |
T |
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| Q |
122 |
taactatgtagtct |
135 |
Q |
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|||||||||||||| |
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| T |
24835389 |
taactatgtagtct |
24835402 |
T |
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