View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: Solexa-NF5824-2 (Length: 225)

Name: Solexa-NF5824-2
Description: NF5824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] Solexa-NF5824-2
Solexa-NF5824-2
[»] chr2 (22 HSPs)
chr2 (57-224)||(41251631-41251798)
chr2 (51-224)||(17445038-17445209)
chr2 (55-224)||(6403801-6403970)
chr2 (53-224)||(42439985-42440156)
chr2 (53-224)||(31581619-31581790)
chr2 (53-224)||(32127138-32127309)
chr2 (53-224)||(35962714-35962885)
chr2 (54-224)||(45418583-45418753)
chr2 (57-224)||(16405603-16405770)
chr2 (60-220)||(771005-771165)
chr2 (60-224)||(18981622-18981786)
chr2 (53-191)||(2958131-2958268)
chr2 (54-224)||(44084600-44084770)
chr2 (79-224)||(12756834-12756979)
chr2 (54-220)||(8147351-8147518)
chr2 (79-210)||(2285887-2286018)
chr2 (56-224)||(8059330-8059498)
chr2 (83-224)||(26162699-26162837)
chr2 (62-180)||(4555250-4555369)
chr2 (54-162)||(26237957-26238065)
chr2 (63-128)||(7072645-7072710)
chr2 (78-128)||(34905973-34906023)
[»] chr5 (21 HSPs)
chr5 (51-224)||(36293618-36293791)
chr5 (51-224)||(39434693-39434866)
chr5 (55-224)||(26283315-26283484)
chr5 (53-224)||(10033926-10034097)
chr5 (53-224)||(13817976-13818147)
chr5 (54-224)||(12278857-12279027)
chr5 (72-224)||(16155015-16155167)
chr5 (56-220)||(1776377-1776541)
chr5 (53-224)||(39657503-39657674)
chr5 (54-224)||(17332548-17332718)
chr5 (54-224)||(31680367-31680537)
chr5 (84-224)||(16333873-16334013)
chr5 (54-224)||(37254641-37254811)
chr5 (53-205)||(3155647-3155799)
chr5 (68-224)||(33430335-33430491)
chr5 (54-209)||(31501728-31501883)
chr5 (56-221)||(19985941-19986106)
chr5 (73-224)||(43068896-43069047)
chr5 (56-224)||(36291373-36291541)
chr5 (67-180)||(28801300-28801415)
chr5 (187-224)||(28801439-28801476)
[»] chr4 (40 HSPs)
chr4 (55-224)||(20129311-20129480)
chr4 (55-224)||(13012189-13012358)
chr4 (55-224)||(26439276-26439445)
chr4 (55-224)||(34407281-34407450)
chr4 (55-224)||(47500774-47500943)
chr4 (53-224)||(25930707-25930878)
chr4 (55-224)||(43355905-43356074)
chr4 (53-224)||(36382343-36382513)
chr4 (56-224)||(43143581-43143749)
chr4 (57-224)||(29319702-29319869)
chr4 (57-224)||(3292893-3293060)
chr4 (54-224)||(30216739-30216909)
chr4 (64-224)||(17511230-17511391)
chr4 (54-224)||(6690232-6690402)
chr4 (53-224)||(40529012-40529185)
chr4 (55-224)||(42333773-42333942)
chr4 (54-224)||(50205074-50205244)
chr4 (54-224)||(10352881-10353051)
chr4 (60-222)||(29995982-29996144)
chr4 (56-224)||(48989330-48989498)
chr4 (57-224)||(28877247-28877414)
chr4 (55-224)||(30077628-30077797)
chr4 (71-224)||(44156668-44156821)
chr4 (113-224)||(6235579-6235690)
chr4 (78-224)||(35545977-35546123)
chr4 (54-208)||(26448053-26448206)
chr4 (89-224)||(1817752-1817887)
chr4 (56-149)||(30109958-30110051)
chr4 (132-224)||(13392878-13392970)
chr4 (132-224)||(13396017-13396109)
chr4 (66-149)||(48129978-48130061)
chr4 (56-144)||(45194178-45194266)
chr4 (53-139)||(27363360-27363446)
chr4 (54-95)||(7769328-7769369)
chr4 (54-91)||(49908782-49908819)
chr4 (79-147)||(6254569-6254637)
chr4 (8-42)||(48313864-48313898)
chr4 (54-91)||(5517494-5517531)
chr4 (187-224)||(30110108-30110145)
chr4 (187-224)||(48130111-48130148)
[»] chr3 (21 HSPs)
chr3 (55-220)||(6269427-6269592)
chr3 (51-224)||(19390143-19390316)
chr3 (55-224)||(22968441-22968610)
chr3 (55-224)||(39771791-39771960)
chr3 (53-224)||(34084119-34084290)
chr3 (54-224)||(45182981-45183151)
chr3 (54-224)||(11018209-11018379)
chr3 (54-224)||(6930891-6931061)
chr3 (54-224)||(33040953-33041123)
chr3 (53-224)||(27935177-27935348)
chr3 (54-224)||(6503566-6503736)
chr3 (54-224)||(45335875-45336044)
chr3 (67-224)||(40081738-40081893)
chr3 (54-205)||(19565517-19565668)
chr3 (54-224)||(35514266-35514432)
chr3 (78-149)||(5135293-5135364)
chr3 (53-111)||(22922156-22922214)
chr3 (174-224)||(22922215-22922265)
chr3 (54-128)||(5354709-5354783)
chr3 (187-224)||(5135421-5135458)
chr3 (54-91)||(6890998-6891035)
[»] chr7 (21 HSPs)
chr7 (55-224)||(14777104-14777273)
chr7 (53-224)||(5555486-5555657)
chr7 (53-224)||(8394124-8394295)
chr7 (57-224)||(3114093-3114260)
chr7 (53-224)||(36630815-36630986)
chr7 (54-224)||(34389053-34389223)
chr7 (54-224)||(37002141-37002311)
chr7 (54-224)||(8867728-8867898)
chr7 (63-224)||(35090177-35090338)
chr7 (73-224)||(40920000-40920151)
chr7 (72-224)||(36658199-36658351)
chr7 (58-224)||(26624749-26624916)
chr7 (61-224)||(43184465-43184628)
chr7 (54-210)||(33685564-33685720)
chr7 (78-220)||(38638237-38638379)
chr7 (54-224)||(7002725-7002895)
chr7 (54-224)||(7048596-7048766)
chr7 (113-180)||(10868514-10868583)
chr7 (51-128)||(26502807-26502884)
chr7 (51-128)||(26589830-26589907)
chr7 (54-99)||(10876829-10876874)
[»] scaffold0069 (1 HSPs)
scaffold0069 (51-224)||(17839-18012)
[»] scaffold0002 (1 HSPs)
scaffold0002 (55-224)||(480454-480623)
[»] chr6 (11 HSPs)
chr6 (55-224)||(398618-398787)
chr6 (53-224)||(34948755-34948926)
chr6 (53-224)||(13837820-13837991)
chr6 (54-224)||(28996730-28996900)
chr6 (54-224)||(18339106-18339276)
chr6 (60-224)||(29743289-29743453)
chr6 (70-224)||(33229333-33229487)
chr6 (54-149)||(31028436-31028531)
chr6 (54-139)||(24697899-24697984)
chr6 (54-90)||(13647017-13647053)
chr6 (82-139)||(24695515-24695572)
[»] chr1 (14 HSPs)
chr1 (55-224)||(26144256-26144425)
chr1 (53-224)||(32982053-32982224)
chr1 (53-224)||(7433444-7433615)
chr1 (53-224)||(42310938-42311109)
chr1 (58-224)||(3828988-3829153)
chr1 (54-224)||(35907552-35907722)
chr1 (54-220)||(17445313-17445479)
chr1 (62-224)||(321374-321536)
chr1 (55-180)||(41972314-41972440)
chr1 (54-180)||(33489687-33489815)
chr1 (53-160)||(23313237-23313345)
chr1 (187-224)||(33489839-33489876)
chr1 (54-90)||(44352614-44352650)
chr1 (79-123)||(48901203-48901247)
[»] scaffold2142 (1 HSPs)
scaffold2142 (55-224)||(523-692)
[»] chr8 (16 HSPs)
chr8 (55-224)||(39914516-39914684)
chr8 (53-224)||(29728383-29728554)
chr8 (58-224)||(16788022-16788188)
chr8 (68-222)||(3648793-3648947)
chr8 (53-210)||(15838285-15838441)
chr8 (53-224)||(34136822-34136993)
chr8 (54-224)||(4404008-4404178)
chr8 (54-224)||(23402108-23402278)
chr8 (54-224)||(36408551-36408721)
chr8 (78-224)||(9877244-9877390)
chr8 (54-224)||(2729193-2729363)
chr8 (75-222)||(42230960-42231105)
chr8 (70-180)||(3435285-3435397)
chr8 (78-147)||(40470567-40470636)
chr8 (54-128)||(10397133-10397207)
chr8 (187-224)||(40470472-40470509)
[»] scaffold0502 (1 HSPs)
scaffold0502 (54-224)||(5230-5400)
[»] scaffold0154 (1 HSPs)
scaffold0154 (54-224)||(31480-31650)
[»] scaffold0041 (1 HSPs)
scaffold0041 (73-224)||(52944-53095)
[»] scaffold0012 (1 HSPs)
scaffold0012 (54-128)||(194028-194102)


Alignment Details
Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 41251798 - 41251631
Alignment:
Q  57 gaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatc 156  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  157 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 41251631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 17445209 - 17445038
Alignment:
Q  51 tgtggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttga 150  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||||     
T  17445209 tgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgg 17445112  T
Q  151 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17445111 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 17445038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 6403970 - 6403801
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||| |||| ||||||||||||||| ||||    
T  6403970 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 6403871  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6403870 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 6403801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 42439985 - 42440156
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| ||    
T  42439985 tggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc 42440084  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||| |||||    
T  42440085 aatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcatgtctct 42440156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 31581790 - 31581619
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||| ||||||||||||| | ||||| ||||| |||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||| ||    
T  31581790 tggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggc 31581691  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  31581690 aatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 31581619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 32127309 - 32127138
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||||| ||||||||| |||||||||||||||||||  ||    
T  32127309 tggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggc 32127210  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | ||||| |||||    
T  32127209 aatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcatgtctct 32127138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 35962714 - 35962885
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||||| |||| ||    
T  35962714 tggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggc 35962813  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  35962814 aatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 35962885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 45418583 - 45418753
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||| ||||||||  ||||||||||||||||||| |||    
T  45418583 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 45418682  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  45418683 atctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctctct 45418753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 16405603 - 16405770
Alignment:
Q  57 gaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatc 156  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||| ||||||||| |||| |||||||||||||||  |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  157 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||| |||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcatgtctct 16405770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 60 - 220
Target Start/End: Original strand, 771005 - 771165
Alignment:
Q  60 cccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctga 159  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||| |||||||||    
T  771005 cccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctga 771104  T
Q  160 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 220  Q
    ||||| ||||||| |||||||||| |||| ||||||||||||| ||||||| | |||||||    
T  771105 aaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 18981622 - 18981786
Alignment:
Q  60 cccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctga 159  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||| | |    
T  18981622 cccgggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaa 18981721  T
Q  160 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||||| |||||    
T  18981722 aaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcatgtctct 18981786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 53 - 191
Target Start/End: Complemental strand, 2958268 - 2958131
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| |     
T  2958268 tggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggt 2958170  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattt 191  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2958169 aatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 44084770 - 44084600
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||| | |||||  |||||||||  ||||||||||||||||||| |||    
T  44084770 ggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggca 44084671  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||| ||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  44084670 atctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctctct 44084600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 12756979 - 12756834
Alignment:
Q  79 tcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaata 178  Q
    |||||||||||||||||| |||||||| ||||| ||||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||||    
T  12756979 tcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaata 12756880  T
Q  179 ggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
     |||| |||||||||||||||||||||||||| | |||||||||||    
T  12756879 agtctcggaattttatttagcacactattgacgggttcatctctct 12756834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 8147351 - 8147518
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||  ||||| | ||||||||  ||||||||||||||||||| |||    
T  8147351 ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggca 8147450  T
Q  154 atctg-aaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 220  Q
    ||||| |||||| ||||||| |||||| ||| ||||||||||||| |||||||||||| | |||||||    
T  8147451 atctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 210
Target Start/End: Original strand, 2285887 - 2286018
Alignment:
Q  79 tcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaata 178  Q
    |||||||||||||||||||||||| |  ||||| ||||| | |||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  179 ggtcttggaattttatttagcacactattgac 210  Q
    ||| ||||||||||||||||||||||||||||    
T  2285987 ggttttggaattttatttagcacactattgac 2286018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 224
Target Start/End: Complemental strand, 8059498 - 8059330
Alignment:
Q  56 cgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaat 155  Q
    ||||||||| || |||||| | ||| ||||||||||||||||||||||| |||||| ||||||| ||||||||  |||||||||||||||||||  ||||    
T  8059498 cgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaat 8059399  T
Q  156 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
     |||||||| ||||||  |||| ||||| ||||||||||||||||||| |||||| | ||||| |||||    
T  8059398 ttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcatttctct 8059330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 26162837 - 26162699
Alignment:
Q  83 tcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaataggtc 182  Q
    |||||||||||| ||||||| | |||||| |||| |||||||||||  ||||||||||||||||||| ||||||| |||||| ||| ||  |||||||||    
T  26162837 tcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacacaaataggtc 26162738  T
Q  183 ttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||   |||||||||||| ||||||| | |||||||||||    
T  26162737 tcgga---ttatttagcacattattgacgggttcatctctct 26162699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 4555369 - 4555250
Alignment:
Q  62 cgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc--aatctga 159  Q
    |||||||||||  |||||||||||||||||||||||||| | || ||||| |||||| | |||||||  |||||||||||||| |||| ||  |||||||    
T  4555369 cgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctga 4555271  T
Q  160 aaattgtcacacgtaaatagg 180  Q
    ||||| |||||||||||||||    
T  4555270 aaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 162
Target Start/End: Original strand, 26237957 - 26238065
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc- 152  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||  ||| | ||||| ||||||||||  ||||||||||||||||||| ||     
T  26237957 ggcgaccccgggcggtcgcccgggctcgatcgat-atttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggca 26238055  T
Q  153 aatctgaaaa 162  Q
    ||||||||||    
T  26238056 aatctgaaaa 26238065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 7072710 - 7072645
Alignment:
Q  63 gggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacac 128  Q
    |||||||||||||| |||||||||||||||||  |||||| |||||||| ||||||||||||||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacac 7072645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 34905973 - 34906023
Alignment:
Q  78 ctcgatcgataatttttgcacattagactcaacctaaaagcccattaacac 128  Q
    |||||||||||||||||||||||||  |  |||| ||||||||||||||||    
T  34905973 ctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacac 34906023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 36293791 - 36293618
Alignment:
Q  51 tgtggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttga 150  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||     
T  36293791 tgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgg 36293692  T
Q  151 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36293691 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctctct 36293618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 39434693 - 39434866
Alignment:
Q  51 tgtggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttga 150  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||||     
T  39434693 tgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttgg 39434792  T
Q  151 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39434793 gcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctctct 39434866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 26283484 - 26283315
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||| |||| ||||||||||||||| ||||    
T  26283484 gcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 26283385  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26283384 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 26283315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 10033926 - 10034097
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||| || |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  10033926 tggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc 10034025  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  10034026 aatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 10034097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 13817976 - 13818147
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  13817976 tggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc 13818075  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |  ||||||||||    
T  13818076 aatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctctct 13818147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 12279027 - 12278857
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||  ||||||||||||||||||| |||    
T  12279027 ggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggca 12278928  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  12278927 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctctct 12278857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 72 - 224
Target Start/End: Original strand, 16155015 - 16155167
Alignment:
Q  72 cccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacac 171  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  172 gtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgacagattcatctctct 16155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 56 - 220
Target Start/End: Complemental strand, 1776541 - 1776377
Alignment:
Q  56 cgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaat 155  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| | |||||| ||||| |||||||||| |||||||||||||||||||| |||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  156 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 220  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 39657674 - 39657503
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||| | ||||||  ||| |||||| ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| ||    
T  39657674 tggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggc 39657575  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  39657574 aatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 39657503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 17332718 - 17332548
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| |||    
T  17332718 ggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 17332619  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  17332618 atctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctctct 17332548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 31680367 - 31680537
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| |||    
T  31680367 ggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 31680466  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  31680467 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 31680537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 84 - 224
Target Start/End: Complemental strand, 16334013 - 16333873
Alignment:
Q  84 cgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaataggtct 183  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  184 tggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||| | ||||| |||||    
T  16333913 tggaattttatttagcacactattgacggattcatgtctct 16333873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 37254641 - 37254811
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||||||| ||||| ||||| | ||||||||  ||||||||||||||||||| |||    
T  37254641 ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 37254740  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||| | |||||||||||    
T  37254741 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctctct 37254811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 3155799 - 3155647
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||| ||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||  |    
T  3155799 tggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggac 3155700  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 205  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  3155699 aatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 68 - 224
Target Start/End: Original strand, 33430335 - 33430491
Alignment:
Q  68 gtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtc 167  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| |||||||||||||| ||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  168 acacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 33430491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 31501883 - 31501728
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| |||    
T  31501883 ggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 31501784  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 209  Q
    ||||||||||| || |||| |||||||||| | |||||||||||||||||||||||    
T  31501783 atctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  56 cgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaat 155  Q
    ||||| |||||||||| |||  ||||||||||||||||||||||||||| |||||| ||||| |||||| ||| |||||||||||||||||||| | |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  156 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 221  Q
    || |||||| ||||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 224
Target Start/End: Original strand, 43068896 - 43069047
Alignment:
Q  73 ccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacg 172  Q
    |||| ||||||| ||||||||| |||||||||| ||||| ||||| |||||||||| |||||||||||||||||||| |||||||||||||| | ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  173 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||| |||| |||||||||||||||||||||||| | | |||||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctctct 43069047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 36291373 - 36291541
Alignment:
Q  56 cgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaat 155  Q
    |||| ||||||||||| ||||  |||||| |||||||||||||||||||   ||||||||||  ||||||||| |||||||||||||||||||| |||||    
T  36291373 cgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaat 36291472  T
Q  156 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    || |||||| | ||||  ||||||||||  |||||||||||| |||||||||||| | |||||||||||    
T  36291473 ctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctctct 36291541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  67 ggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaattt--gagcaatctgaaaatt 164  Q
    |||||||| | |||||||||||||||||||||||||||  ||| | ||||||||||||||||  ||||||||||||||||||  ||  ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  165 gtcacacgtaaatagg 180  Q
     ||||||| |||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 28801439 - 28801476
Alignment:
Q  187 aattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  28801439 aattttatttagctcactattgacaggttcatctctct 28801476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 20129311 - 20129480
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  20129311 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 20129410  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  20129411 tctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctctct 20129480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 13012189 - 13012358
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||| ||||||||||||||| ||||    
T  13012189 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 13012288  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13012289 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 13012358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 26439445 - 26439276
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||    
T  26439445 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 26439346  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  26439345 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 26439276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 34407450 - 34407281
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||    
T  34407450 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 34407351  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  34407350 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 34407281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 47500774 - 47500943
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||  |||||||||||||| ||||    
T  47500774 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaagaaaaatttgggcaa 47500873  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47500874 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 47500943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 25930707 - 25930878
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  25930707 tggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc 25930806  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  25930807 aatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 25930878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 43355905 - 43356074
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||    
T  43355905 gcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 43356004  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  43356005 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 43356074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 36382513 - 36382343
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||| |||||||||| ||||||||| ||||||||||  |    
T  36382513 tggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggac 36382415  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  36382414 aatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 36382343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 56 - 224
Target Start/End: Complemental strand, 43143749 - 43143581
Alignment:
Q  56 cgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaat 155  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||| |||||    
T  43143749 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 43143650  T
Q  156 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||  | |||||||||||    
T  43143649 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctctct 43143581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 29319869 - 29319702
Alignment:
Q  57 gaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatc 156  Q
    |||||| |||||||| || | |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  29319869 gacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatc 29319770  T
Q  157 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||||||||| | ||||| |||||    
T  29319769 tgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcatgtctct 29319702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 3293060 - 3292893
Alignment:
Q  57 gaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatc 156  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| ||||||    
T  3293060 gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 3292961  T
Q  157 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  3292960 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctctct 3292893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 30216909 - 30216739
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||  ||||||||  ||||||||||||||||||| |||    
T  30216909 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca 30216810  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||| | |||||| ||| |||||||||||||||||||||||||| | |||||||||||    
T  30216809 atctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctctct 30216739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 17511391 - 17511230
Alignment:
Q  64 ggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaat 163  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||    
T  17511391 ggcggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaat 17511292  T
Q  164 tgtcacacgtaaataggtcttgg-aattttatttagcacactattgacagtttcatctctct 224  Q
    ||| ||||| ||||||||||||| |||||||||||||||| ||||||  | |||||||||||    
T  17511291 tgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctctct 17511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 6690402 - 6690232
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| |||    
T  6690402 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 6690303  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | ||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| | ||| |||||||    
T  6690302 aactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctctct 6690232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 40529012 - 40529185
Alignment:
Q  53 tggcgaccccgggcg--gtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttga 150  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||     
T  40529012 tggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttgg 40529111  T
Q  151 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
     |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  40529112 acaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcatatctct 40529185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 42333942 - 42333773
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||| |||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||||    
T  42333942 gcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 42333843  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||| |  |||||||||||    
T  42333842 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgataagttcatctctct 42333773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 50205244 - 50205074
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||  ||||| ||||||| ||||||||  ||||||||||||||| |||  ||    
T  50205244 ggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggaca 50205145  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  50205144 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatcactct 50205074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 10353051 - 10352881
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||| |||||||||| |||    
T  10353051 ggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 10352952  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| | ||||| |||||||||| ||||||||||||||||||| | || | | |||||||||||    
T  10352951 atctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctctct 10352881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 60 - 222
Target Start/End: Complemental strand, 29996144 - 29995982
Alignment:
Q  60 cccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctga 159  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||| |||||||||||||| |||||||||    
T  29996144 cccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctga 29996045  T
Q  160 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctct 222  Q
    ||||| |  |||| |||||| ||| ||||||||||| |||||||||||||| | |||||||||    
T  29996044 aaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctct 29995982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 48989330 - 48989498
Alignment:
Q  56 cgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaat 155  Q
    |||| ||||||||||  ||||  |||||||||||||||||||||||| || ||||  ||||| ||||||||||  ||||||||||||||||||| |||||    
T  48989330 cgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaat 48989429  T
Q  156 ctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||| ||| ||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  48989430 ctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 48989498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 28877414 - 28877247
Alignment:
Q  57 gaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatc 156  Q
    ||||||| ||||||||  || || |||||||||||||||||||||||| |||||||||||||  ||||||||| ||| ||||||||||||||| | ||||    
T  28877414 gaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatc 28877315  T
Q  157 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||| ||||||| |||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  28877314 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctctct 28877247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 30077797 - 30077628
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||| ||||||||||||| | ||| |||||||| ||||||||||||||| ||||| |||||  ||||||||| ||||||||||||||||||||  |||    
T  30077797 gcgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggacaa 30077698  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||| | ||||  |||||||||||| ||||||||||||||||||| || | | |||||||||||    
T  30077697 tctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctctct 30077628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 44156668 - 44156821
Alignment:
Q  71 gcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcaca 170  Q
    |||||| ||| | |||||||||||||||||||||| ||||| ||||||| ||||||||  |||||||||||||| ||||  ||||||||||||| || ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  171 cgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    || |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 44156821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 6235579 - 6235690
Alignment:
Q  113 aaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacag 212  Q
    ||||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  6235579 aaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgg 6235678  T
Q  213 tttcatctctct 224  Q
     |||||||||||    
T  6235679 gttcatctctct 6235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 35545977 - 35546123
Alignment:
Q  78 ctcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaat 177  Q
    ||||||||| ||||||||| ||| |||| ||||| ||||||| ||||||||  |||||||||||||| |||| |||||||||||||| ||||||| ||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  178 aggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
     |||||  ||||||||||||||||||||||||  | |||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctctct 35546123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 26448053 - 26448206
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    |||||| ||| ||| ||| |||||||||||||||||||||||||||||| |   |||| ||||| ||||||||||  ||||||||| ||||||||| |||    
T  26448053 ggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggca 26448151  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattg 208  Q
    ||||||||||| ||| ||  |||||||| | ||||||||||||||||||||||||    
T  26448152 atctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 1817752 - 1817887
Alignment:
Q  89 atttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaataggtcttggaa 188  Q
    ||||||||||||||||  ||| | ||||| ||||||| || |||| ||||||||||||||| ||||||| |||||| | ||||| |||||||||| ||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  189 ttttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||| |||||||||| | | |||||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctctct 1817887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 30109958 - 30110051
Alignment:
Q  56 cgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttg 149  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |  |||| ||||||||||  |||||||||||||||||||    
T  30109958 cgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttg 30110051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 13392970 - 13392878
Alignment:
Q  132 tacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||| ||||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||  | |||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgaatgattcatctctct 13392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 13396109 - 13396017
Alignment:
Q  132 tacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||| ||||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||  | |||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgaatgattcatctctct 13396017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 48129978 - 48130061
Alignment:
Q  66 cggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttg 149  Q
    |||||| |||| |||||||||||||||||||| ||||||| ||||| |||||| |||||||||  |||||||||||||||||||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttg 48130061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 45194178 - 45194266
Alignment:
Q  56 cgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaa 144  Q
    ||||||| |||| | |||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||| ||||    
T  45194178 cgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaa 45194266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 27363360 - 27363446
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaa 139  Q
    |||||||| ||||||||||||||| |||||||||   |||||||| ||||| | ||||| ||||||||||||||||  |||||||||    
T  27363360 tggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaaaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 7769328 - 7769369
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttg 95  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  7769328 ggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 49908819 - 49908782
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatt 91  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  49908819 ggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  79 tcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatt 147  Q
    |||||||||||||||||||||||| || ||||| ||||| | ||||||||  || |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 48313864 - 48313898
Alignment:
Q  8 gtcttcaactaggtcgatactctctacaactagca 42  Q
    |||||||||||||||||||||||| ||||||||||    
T  48313864 gtcttcaactaggtcgatactctcaacaactagca 48313898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 5517531 - 5517494
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatt 91  Q
    |||||||||||||||||||| || ||||||||||||||    
T  5517531 ggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 30110108 - 30110145
Alignment:
Q  187 aattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||| | |||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctctct 30110145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 48130111 - 48130148
Alignment:
Q  187 aattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||| | |||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctctct 48130148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 5e-77; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 55 - 220
Target Start/End: Complemental strand, 6269592 - 6269427
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  6269592 gcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 6269493  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269492 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 19390143 - 19390316
Alignment:
Q  51 tgtggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttga 150  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||     
T  19390143 tgtggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgg 19390242  T
Q  151 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19390243 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 19390316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 22968610 - 22968441
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| ||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 22968511  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22968510 tctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctctct 22968441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 39771791 - 39771960
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||||    
T  39771791 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 39771890  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  39771891 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctctct 39771960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 34084290 - 34084119
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||| |||||||||||||||||||| ||    
T  34084290 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggc 34084191  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  34084190 aatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctctct 34084119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 45182981 - 45183151
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| |||    
T  45182981 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 45183080  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||  |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  45183081 atctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctctct 45183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 11018379 - 11018209
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    |||||| |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||| |||    
T  11018379 ggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 11018280  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| ||||||||||  |||||||||||||||||| |||||| | |||||||||||    
T  11018279 atctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctctct 11018209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 6931061 - 6930891
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||| |||||||| |||||||||||||||||||  |||    
T  6931061 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggca 6930962  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||||    
T  6930961 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctctct 6930891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 33040953 - 33041123
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||| ||||||| ||||| ||||||  ||||||||  |||||||||||||||||||| ||    
T  33040953 ggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaaca 33041052  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    || |||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  33041053 atttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 33041123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 27935177 - 27935348
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||| |||| |||| ||||||||| ||||||||||||||||||||||||| || ||||| |||||| |||||||||  ||||||||||||||||||| ||    
T  27935177 tggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggc 27935276  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||| ||| ||| |||||||||| |||||||||||||||| ||||||||| | |||||||||||    
T  27935277 aatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctctct 27935348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 6503736 - 6503566
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| ||||||| |||| |||  |||||||||||||||||| ||||    
T  6503736 ggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaaaaagaaaaatttaagca 6503637  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||| | |||||||||| ||| ||||||||||||||| |||||  | |||||||||||    
T  6503636 atctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctctct 6503566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 45335875 - 45336044
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||| | |||||||| ||||||||||||||||| || |||    
T  45335875 ggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtc-attaacacatttacaaaaagaaaaatctgggca 45335973  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| | ||||| |||||||||||||||||||||||||||||||| || | | |||||||||||    
T  45335974 atctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctctct 45336044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 40081893 - 40081738
Alignment:
Q  67 ggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgt 166  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgt 40081795  T
Q  167 cacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||| |||||| |||||| ||||| ||||||||||||||||| | |||||||||||    
T  40081794 cacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctctct 40081738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 19565668 - 19565517
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||| |||||||||||||||||  || |||||||||||||||||||||||| ||||| ||||  |||||||||| ||||||||||||||||||||  ||    
T  19565668 ggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggaca 19565569  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacacta 205  Q
    ||||||||||| | ||||| |||||||||| |||||||||||||||||||||    
T  19565568 atctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 35514266 - 35514432
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||| |||||| |||| |||||||||||||||| ||| | ||||  ||||| ||||| ||||||||||    |||||||||||||||||  ||    
T  35514266 ggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacac----acaaaaagaaaaatttggaca 35514361  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    || |||||||| |||| || |||||||||| |||||||||||| ||||||||||||| | |||||||||||    
T  35514362 atatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctctct 35514432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 5135293 - 5135364
Alignment:
Q  78 ctcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttg 149  Q
    |||||||||| ||||||| ||||||||| |||||||||||| |||||||||  |||||||||||||||||||    
T  5135293 ctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttg 5135364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 22922156 - 22922214
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacc 111  Q
    |||||| ||||||||||||| ||| |||||||||| |||||||||||||| ||||||||    
T  22922156 tggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 22922215 - 22922265
Alignment:
Q  174 aaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||| ||||||||||||||||| |||||||||||| | |||||||||||    
T  22922215 aaatagatcttggaattttatttaacacactattgacgggttcatctctct 22922265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 5354709 - 5354783
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacac 128  Q
    ||||||||||||||||||||||| |||||||  |||||||  ||||||||   ||||||| | ||||||| ||||    
T  5354709 ggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattaggtccaacctataggcccatttacac 5354783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 5135421 - 5135458
Alignment:
Q  187 aattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||| | |||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctctct 5135458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 6890998 - 6891035
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatt 91  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  6890998 ggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 14777273 - 14777104
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| ||||    
T  14777273 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaa 14777174  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14777173 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatcgctct 14777104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 5555486 - 5555657
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||    
T  5555486 tggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggc 5555585  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  5555586 aatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 5555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 8394124 - 8394295
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||||||| |||||||||| ||    
T  8394124 tggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggc 8394223  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  8394224 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctctct 8394295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 3114260 - 3114093
Alignment:
Q  57 gaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatc 156  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  3114260 gaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 3114161  T
Q  157 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  3114160 tgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 3114093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 36630815 - 36630986
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||| ||    
T  36630815 tggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggc 36630914  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  36630915 aatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctctct 36630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 34389223 - 34389053
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||  ||||||||  ||||||||||||||||||| |||    
T  34389223 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca 34389124  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||| ||| ||| | |||||||||||    
T  34389123 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctctct 34389053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 37002311 - 37002141
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||| | ||||| | ||||||||  ||||||||||||||||||| |||    
T  37002311 ggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 37002212  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  37002211 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 37002141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 8867898 - 8867728
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| | ||||||| ||||| || |||||||||||||||||||| |||    
T  8867898 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggca 8867799  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  8867798 atcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatcactct 8867728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 35090177 - 35090338
Alignment:
Q  63 gggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaa 162  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| | ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  163 ttgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    || ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctctct 35090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 73 - 224
Target Start/End: Complemental strand, 40920151 - 40920000
Alignment:
Q  73 ccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacg 172  Q
    |||| ||||||||||||||||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||||||  ||||||||||||| ||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  173 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
     |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctctct 40920000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 72 - 224
Target Start/End: Original strand, 36658199 - 36658351
Alignment:
Q  72 cccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacac 171  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||| |||||||   | ||||||| ||||||||| |||||||||||||| ||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  172 gtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 36658351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 26624749 - 26624916
Alignment:
Q  58 accccgggcggtcgcccggactcgat-cgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatc 156  Q
    |||||||||||||||| || |||||| |||||||||||||| ||||||| ||| | |||||   ||||||||  ||||||||||||||||||| ||||||    
T  26624749 accccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatc 26624848  T
Q  157 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  26624849 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 26624916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 61 - 224
Target Start/End: Complemental strand, 43184628 - 43184465
Alignment:
Q  61 ccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaa 160  Q
    |||||||||||| ||| ||||||||||||||||| | ||| ||||| |||| ||||||| |||||||   ||||||||||||||||||| ||||||||||    
T  43184628 ccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaa 43184529  T
Q  161 aattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||||||||| | |||||||||||    
T  43184528 aattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctctct 43184465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 33685564 - 33685720
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||| ||| ||||| ||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||  ||||||||||||||||||| |||    
T  33685564 ggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggca 33685663  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 210  Q
    ||||||||||| ||| ||| ||||| ||||   ||||||||||||||||||||||||    
T  33685664 atctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgac 33685720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 78 - 220
Target Start/End: Complemental strand, 38638379 - 38638237
Alignment:
Q  78 ctcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaat 177  Q
    |||||| ||||||||||||||||||||  ||||| ||||| | ||||||||  ||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  38638379 ctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 38638280  T
Q  178 aggtcttggaattttatttagcacactattgacagtttcatct 220  Q
    |||||| |||||||||||||||||||||||||| | |||||||    
T  38638279 aggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 7002725 - 7002895
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    |||||||||| |||||||||||| |||||||||  ||||||  |||||| || ||||| ||||||| ||||||||   |||||||| |||||||||  ||    
T  7002725 ggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggaca 7002824  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||| |||||| ||||||| |||||||||  |||||||||||||||||||||||||| | |||||||||||    
T  7002825 atctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctctct 7002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 7048596 - 7048766
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    |||||||||| |||||||||||| |||||||||  ||||||  |||||| || ||||| ||||||| ||||||||   |||||||| |||||||||  ||    
T  7048596 ggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggaca 7048695  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||| |||||| ||||||| |||||||||  |||||||||||||||||||||||||| | |||||||||||    
T  7048696 atctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctctct 7048766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  113 aaaagcccattaacacgtttacaaaaagaaaaatttgagc--aatctgaaaattgtcacacgtaaatagg 180  Q
    |||||||||||||||| |||||||||||||||||||| ||  |||||||||||| |||| || |||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 26502807 - 26502884
Alignment:
Q  51 tgtggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacac 128  Q
    |||||||||||| ||| ||||||||| |||||||||   |||||||| ||||  | ||||| ||||||||||||||||    
T  26502807 tgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacac 26502884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 26589907 - 26589830
Alignment:
Q  51 tgtggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacac 128  Q
    |||||||||||| ||| ||||||||| |||||||||   |||||||| ||||  | ||||| ||||||||||||||||    
T  26589907 tgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacac 26589830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 10876874 - 10876829
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcaca 99  Q
    ||||| |||| | |||||||||| ||||||||||||||||||||||    
T  10876874 ggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 17839 - 18012
Alignment:
Q  51 tgtggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttga 150  Q
    ||||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||     
T  17839 tgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgg 17938  T
Q  151 gcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17939 gcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctctct 18012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 480623 - 480454
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| ||||    
T  480623 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 480524  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  480523 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 480454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 398618 - 398787
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| ||||    
T  398618 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 398717  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  398718 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 34948926 - 34948755
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  34948926 tggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc 34948827  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||| | ||||| |||||    
T  34948826 aatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcatgtctct 34948755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 13837820 - 13837991
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    ||||||||||||||| |||| |||  ||||||||||||||||| ||||||||||||||| |||||| ||| ||||| |||||||||||||||||||| ||    
T  13837820 tggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggc 13837919  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  13837920 aatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatgtctct 13837991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 28996730 - 28996900
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||||||| | ||||||||  ||||||||||||||||||| |||    
T  28996730 ggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggca 28996829  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  28996830 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 28996900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 18339106 - 18339276
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||||||||| ||||||||  |||||||||||||| |||| |||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 18339276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 29743289 - 29743453
Alignment:
Q  60 cccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctga 159  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||| ||||| |||||  ||||||||| |||||| ||||||||||||| |||||||||    
T  29743289 cccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctga 29743388  T
Q  160 aaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||| | ||||| |||||||||| ||||||||||||||||||||| || | | |||||||||||    
T  29743389 aaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctctct 29743453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 70 - 224
Target Start/End: Complemental strand, 33229487 - 33229333
Alignment:
Q  70 cgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcac 169  Q
    ||||||| |||||||||| ||||||| ||||||||| ||||| ||||| |||||||||| ||| |||||||||||||||| |||||||||||||| | ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  170 acgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||| |||| || ||||||||||||||||||||| | | |||||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctctct 33229333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 31028531 - 31028436
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttg 149  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||| ||||||||||| ||| ||||    
T  31028531 ggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttg 31028436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 24697984 - 24697899
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaa 139  Q
    ||||||||||| |  |||||||| ||| ||||||||||||| |||||||| | ||||| ||||||||||||||||  |||||||||    
T  24697984 ggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 13647017 - 13647053
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataat 90  Q
    ||||||||||||||||||||||| |||||||||||||    
T  13647017 ggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 24695515 - 24695572
Alignment:
Q  82 atcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaa 139  Q
    |||||| ||||||  ||||||| ||||||| ||||||||||||||||  |||||||||    
T  24695515 atcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaaaa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 26144256 - 26144425
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| ||||    
T  26144256 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 26144355  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26144356 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 26144425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 32982224 - 32982053
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||  |    
T  32982224 tggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggac 32982125  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  32982124 aatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctctct 32982053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 53 - 224
Target Start/End: Original strand, 7433444 - 7433615
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||| ||||||||||||||||||  ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| ||    
T  7433444 tggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggc 7433543  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||| |||||||||||||  |||||||||||| |||||||||||||||||||||||| | ||||| |||||    
T  7433544 aatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcatgtctct 7433615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 42311109 - 42310938
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||| | || |||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| ||    
T  42311109 tggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaatttgggc 42311010  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||| || |||||||| | |||||||||||    
T  42311009 aatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctctct 42310938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 3828988 - 3829153
Alignment:
Q  58 accccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatct 157  Q
    ||||||| ||||||| |||  |||||||||||||||||||||||| || ||||| |||||  |||||||||  ||||||||||||||||||| |||||||    
T  3828988 accccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatct 3829087  T
Q  158 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  3829088 gaaaattttcatacgcaaataggtc-tggaattttatttagcacactattgacgggttcatctctct 3829153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 35907552 - 35907722
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||| ||||  ||  |||||||||||||| |||| | |    
T  35907552 ggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaagaaaattttgggta 35907651  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||   |||||||||||    
T  35907652 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctctct 35907722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 17445313 - 17445479
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    |||||||||  |||||||||||| || |||| |||||||||| ||||||||  ||||| ||||| | ||||||||  ||||||||||||||||||| |||    
T  17445313 ggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 17445412  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 220  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||| | |||||||    
T  17445413 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 224
Target Start/End: Complemental strand, 321536 - 321374
Alignment:
Q  62 cgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaa 161  Q
    |||||||||| |||| ||||||||||||||||||  |||||||  ||||| ||||| ||||||||||  ||||||||||||||||||| |||||||||||    
T  321536 cgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaa 321437  T
Q  162 attgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||| ||| | | |||||||||| ||||||||||||| |||| ||||||| | |||||||||||    
T  321436 attctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctctct 321374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 41972440 - 41972314
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttg--agc 152  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||  ||||||||||||| ||||||||  |||||||||||||||||||  |      
T  41972440 gcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaaaaagaaaaatttggaaaa 41972342  T
Q  153 aatctgaaaattgtcacacgtaaatagg 180  Q
    |||||||||||| ||||||| |||||||    
T  41972341 aatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 33489687 - 33489815
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc- 152  Q
    ||||||||||| ||||||  |||  | | ||||||||||||| ||||||||||||| ||||||||||||||||||  |||| |||||||||||||||||     
T  33489687 ggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagca 33489786  T
Q  153 -aatctgaaaattgtcacacgtaaatagg 180  Q
     |||||||||||| ||||||| |||||||    
T  33489787 aaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 23313237 - 23313345
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataattt-ttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgag 151  Q
    |||||| | |||||||| |||||| |||||| ||| |||| |||||||||||||||||| ||||||  ||||||||| |||||||||||||||||||| |    
T  23313237 tggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttggg 23313336  T
Q  152 caatctgaa 160  Q
    |||||||||    
T  23313337 caatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 33489839 - 33489876
Alignment:
Q  187 aattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||| | |||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctctct 33489876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 44352650 - 44352614
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataat 90  Q
    |||||||||||| |||||||||| |||||||||||||    
T  44352650 ggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 48901247 - 48901203
Alignment:
Q  79 tcgatcgataatttttgcacattagactcaacctaaaagcccatt 123  Q
    |||||||||||||| |||||||||| | ||||| |||||||||||    
T  48901247 tcgatcgataatttatgcacattaggcccaacccaaaagcccatt 48901203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 523 - 692
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| ||||    
T  523 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 622  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  623 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 692  T

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Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 39914516 - 39914684
Alignment:
Q  55 gcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaa 154  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||| ||||| ||||||||| ||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaa 39914614  T
Q  155 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    | |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39914615 tttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctctct 39914684  T

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Target: chr8; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 29728554 - 29728383
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||| ||||||||||  |||||||||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| ||    
T  29728554 tggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggc 29728455  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  29728454 aatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctctct 29728383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 16788188 - 16788022
Alignment:
Q  58 accccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatct 157  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||||||||||||| |||||||    
T  16788188 accccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatct 16788089  T
Q  158 gaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
     |||| | ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  16788088 taaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctctct 16788022  T

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Target: chr8; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 3648947 - 3648793
Alignment:
Q  68 gtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtc 167  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtc 3648848  T
Q  168 acacgtaaataggtcttggaattttatttagcacactattgacagtttcatctct 222  Q
    ||||| || ||||| |||||||||||||||||||||||||||| | |||||||||    
T  3648847 acacgcaagtaggttttggaattttatttagcacactattgacgggttcatctct 3648793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 53 - 210
Target Start/End: Original strand, 15838285 - 15838441
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||||| ||||| |||||||||| ||||||||| |||||||||| ||    
T  15838285 tggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggc 15838383  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 210  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  15838384 aatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgac 15838441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 34136993 - 34136822
Alignment:
Q  53 tggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc 152  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||  ||||||||||||||||||| ||    
T  34136993 tggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc 34136894  T
Q  153 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||| ||||||| |||||||||| | ||||||||||||||||| |||||  | |||||||||||    
T  34136893 aatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctctct 34136822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 4404008 - 4404178
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||   ||||||||||||||||||| |||    
T  4404008 ggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 4404107  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||| |||||| ||||||| |||||||||| ||||||||||||||||||| |||||  | |||||||||||    
T  4404108 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctctct 4404178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 23402108 - 23402278
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||| ||||||| ||||||||  ||||||||||||||||||| |||    
T  23402108 ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 23402207  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||||| |||||||||| | ||||||||||| |||||||||||| | |||||||||||    
T  23402208 atctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctctct 23402278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 36408551 - 36408721
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||  ||||| ||||| |||||||||| ||||||||||||||| |||  |||    
T  36408551 ggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggca 36408650  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    || |||||||| | |||||  |||||||||  |||||||||||| |||||||||| | | |||||||||||    
T  36408651 atttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctctct 36408721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 9877244 - 9877390
Alignment:
Q  78 ctcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgtaaat 177  Q
    |||||| |||||||||||||||||||||  |||| ||||| | ||||||||  ||||||||||||||||||| |||||||||||||| ||||| | ||||    
T  9877244 ctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaaat 9877343  T
Q  178 aggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    |||||| | |||||||||||||||||||||| ||  |||||||||||    
T  9877344 aggtctcgaaattttatttagcacactattgtcaaattcatctctct 9877390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 2729363 - 2729193
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||| |  ||| | ||||||||||||||||  ||| |||||||||  |||  |||    
T  2729363 ggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggca 2729264  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    || |||||| | ||| ||| ||||||||||   |||||||||||||||||||||||  | |||||||||||    
T  2729263 atttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctctct 2729193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 222
Target Start/End: Original strand, 42230960 - 42231105
Alignment:
Q  75 ggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacgta 174  Q
    ||||||| || ||||||||||||||||| |  ||||  ||||| ||||||||||  ||||||||||||||||||| ||||| |||||||| ||| | | |    
T  42230960 ggactcgttcaataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgca 42231057  T
Q  175 aataggtcttggaattttatttagcacactattgacagtttcatctct 222  Q
    |||||||||  ||||||||||||||||||||||||| | |||||||||    
T  42231058 aataggtctcagaattttatttagcacactattgacggattcatctct 42231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  70 cgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagc--aatctgaaaattgtc 167  Q
    ||||||| || ||||||||||||||||||||||||| ||||| |||| |||||||||||  ||||||||||||||||||| ||  |||||||||||| ||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  168 acacgtaaatagg 180  Q
    | ||| |||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 40470636 - 40470567
Alignment:
Q  78 ctcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatt 147  Q
    |||||||||||||||||||||||||||| |||   ||||| ||||||||||  ||| ||||| |||||||    
T  40470636 ctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 10397207 - 10397133
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacac 128  Q
    |||||| ||||||  |||||||| ||| ||||||||||| | ||||||||  |||||| ||||||| ||||||||    
T  10397207 ggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacac 10397133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 40470509 - 40470472
Alignment:
Q  187 aattttatttagcacactattgacagtttcatctctct 224  Q
    |||||||||||||||||||||||| | |||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctctct 40470472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 5230 - 5400
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||||||||| ||||||||  |||||||||||||| |||| |||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctctct 5400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 31480 - 31650
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagca 153  Q
    ||||||||| | ||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||  |||||||||||||||||||  ||    
T  31480 ggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggaca 31579  T
Q  154 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
    ||||||||||| |||| || |||||||||| | |||||||||| ||||||||||||||| |||||||||||    
T  31580 atctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctctct 31650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 73 - 224
Target Start/End: Original strand, 52944 - 53095
Alignment:
Q  73 ccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacacgtttacaaaaagaaaaatttgagcaatctgaaaattgtcacacg 172  Q
    |||| ||||||||||||||||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||||||  ||||||||||||| ||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  173 taaataggtcttggaattttatttagcacactattgacagtttcatctctct 224  Q
     |||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctctct 53095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 194028 - 194102
Alignment:
Q  54 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattagactcaacctaaaagcccattaacac 128  Q
    ||||||||||||||||||||||| |||||||  ||||||   |||||||| | ||||||| | ||||||| ||||    
T  194028 ggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaacctataggcccatttacac 194102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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