View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5824-37 (Length: 115)
Name: Solexa-NF5824-37
Description: NF5824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5824-37 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 76; Significance: 1e-35; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 37645435 - 37645330
Alignment:
| Q |
8 |
acacaaacatgcatggatccttgctaattcatgagtacataaatctaagtatgagaggaaatttgtacacaaaagtaaccaaaagaaaacattaatacct |
107 |
Q |
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| T |
37645435 |
acacaaacatgcatggatccgtgataatttat-agtacataaatctaagtatgagaggaaatttgt-cacaaaagtaaccaaaaaaaaacattaatacct |
37645338 |
T |
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| Q |
108 |
caacctgc |
115 |
Q |
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|||||||| |
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| T |
37645337 |
caacctgc |
37645330 |
T |
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