View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5824-40 (Length: 105)
Name: Solexa-NF5824-40
Description: NF5824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5824-40 |
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Alignment Details
Target: chr2 (Bit Score: 73; Significance: 7e-34; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 73; E-Value: 7e-34
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 199446 - 199522
Alignment:
| Q |
10 |
aattttcttcatcaaattcatcataaatcaatcacctagatcgaataagtaaacgaacctagtaaacaacaactgag |
86 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
199446 |
aattttcttcatcaaattcatcataaatcaatcacctagatcgaagaagtaaacgaacctagtaaacaacaactgag |
199522 |
T |
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