View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5825-18 (Length: 142)
Name: Solexa-NF5825-18
Description: NF5825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5825-18 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 13464172 - 13464312
Alignment:
| Q |
2 |
catagagagtgattgtgatgaaactaaaatgcatcaactctccatataagtcacaacattatatgctacacggaaggaagcatgacaacttgttcaagtg |
101 |
Q |
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| T |
13464172 |
catagagagtgattgtgatgaaactaaaatgcatcaactctctatataagtcacaacattatatgctacacggaaggaagcatgacaacttgttcaagtg |
13464271 |
T |
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| Q |
102 |
gccaacatatgtttcatataggttaaatacttattttagtc |
142 |
Q |
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| T |
13464272 |
gccaacatatgtttcatatagtttaaatacttattttagtc |
13464312 |
T |
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