View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: Solexa-NF5825-7 (Length: 163)
Name: Solexa-NF5825-7
Description: NF5825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] Solexa-NF5825-7 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 127; Significance: 7e-66; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 127; E-Value: 7e-66
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20675952 - 20675790
Alignment:
| Q |
1 |
agatcataaggaagtcgagtgagaagaagaggaagagaatgaaaatggaagcttagttgctaagatgataaaaaatcatgaatctattattcaacaaaag |
100 |
Q |
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| T |
20675952 |
agatcatatggaagtagagttacaagaagaggaagagaatgaaaatagaagcttagttgctaagatgatcaaaaatcatgaatctattattcaacaaaag |
20675853 |
T |
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| Q |
101 |
aacgaagaattgagtcggattaagcatcgaatattgcaagagaaaaaggcgtcatcgtccaag |
163 |
Q |
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| T |
20675852 |
aacgaagaattgaatcggattaagaatcgaatattacaagagaaaaaggcgtcatcgtccaag |
20675790 |
T |
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